Rh5AG236100

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000420
Physical Location & Seq
Reverse (-)
28660304 .. 28663034
2731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG236100.1

Sequence Viewer

Length: 2484 bp
ATGCCTATGTCCAGGAAGTATAAATTTTCTGCTACCACCGCTTTAAAGATGTGGTGCACTCTGCCAAAGCTTCTCATATTCTTCTTTGTTTTCGCCATCTTTTCTTTGAACTCAGTTTCATCCTCTGCTACACCTGATGAACTCACTTATGCTGATCACTGTGCTTCAATTGTTCCTGAGTCAAACCCGAAAAGATATGCTGCATTAGATTCCTCTGTCTTTCACCATACAGGTTTCTATATTGGCGGGGGCAGTGGTGGTGGCATTCGTAGTCCAAGACCAGCACGTCAACTTCATTATGAGCACCCAAATCCAATTGAATTCAATGCCTGGAGTGTCAGAGAAACTGACATACAAAACTTATTCAATGTTCAAGGAAGTCTTGAATTTGAGAGAGACAATTACCATCCTGGAAACGTCAGAAGTCGCGAGCCTCAAAGTTCGGTGAGGTTTGAACTTAGTGGGTTCTGGTCAATATCTTCTGGAAAGCTTTGCATGGTTGGATCAGGTTCTATTTACTTGAAACAAGGTGATCTGCTTATTGATGTTCCTGCTCTTCTGAAGTTGAATAATCTCATGAATTTCACTAGTATTTCAAGTCTGATTAGTGGAACCTTAGAGAGCTTGACCAGTTCTCAGAAAGATCCCAATTATTTTGAACCAATCTCTATGCTGATACTTCCTCGTATAAACTACCAGTACACTTTGGTTTCAAATATATCTGATGATGACAGCTCTTCTGGTGGAAGTGATGCCCTCTTGGGTTCTTTGCAGATGGAGAAGTTTTGCTCTGCATTCTCAGGAGTAGTACCAGTCCATGAATTTGATCTCAAGTATTTGAGCCATTGTCTTTCTGCAAAGAACTGTACTACTCCACTTTCTGTGTCTGGTCTTTTGCCTCGCATTGTCGCATTAAGGGATATTGAGTGTTTGGAAGATCAAAGAAGGTTGAGAGTTCTGGTAGAATTTTCAGACAAGACCAAACACTGGTATCATAGGGCCTTATATCCCAATACAACCTTTGTTGGAGAGGGGTCATGGAATGCAAAGAAAAATCAGCTACATGTGGTTGCTTGTCGATTCTTGGATGCAACACATCTTGTCAATAATTCTCATGTGGGTGATTGTTCAATAGGACTGAGTTTGTCATTTCCTGGAATATGGACAATTGGAGATACCAGAAGCACAGCAGGGCACATTTGGAGCAACAAAACTGTCACAGAATCGGGCTACTTTGAGAATATAACATTTGAAAGTCATGAGACTTATGTTGGAGGTGTTCTACTTAAAGGTCAGAAATATGAGTATACCCAAATTGACAAAGTAACCAAGTTGTGCCCCAGAAGAAACAGGACTGCTGCTAATGCTCAGAACACCAACTTATCCCCAAATCCATTTCCTTATGAAGGAAGCCTGTGCATGGTAGGCTGCCGAAATGTGGGCTCAACAGATCAGCAGCCAATAAATGATTCTGTAGATTGTGAGATTCTACTCAATTTTCAGTGGCCTCCAAATCCAGCGAGGAAGAATTCAGGTTTCTTCAAGGGAAGCATTGTAAGCACACGGGAAAAGTCTGATCCTCTTCATTTTGATCATATAGAATTGTCTCCAGCTCACAGTTTCATAGCTGATTCCTATCGAAGGGTGGAGGTCGAGGTCATCTTGATTCTTATGACCATCACGCTTGCATGTGTTTTTGGGGCATTACAACTTTTTCATGTGAAACGGCATCCGGACGTGCTTCCATCCATATCAATCTTAATGGTAGTAATTCTAACCCTTGGCTACATGATACGTCTTATGTATTACTTTGAAGCGATCTTCATGGATAACACTGATCACCAAAACCCTTTTCTTGGAAGTGGTGGGCGGGTTCAACTTTCTCAGTTCATTGTAAGAGTAATAACAGTACAAACAATGGTAGCTTTCTTGCTGCAATTGCGCCTTTTGCAGAAAATTTGGTCAGCAAGATCCACTAAAGGAATCTATAAGCAGCTTTGGGATGTGGAGAAGAAGGCTGTATCAATATATGCCATAGGGGTTTTAGTTGCTATGGTGCTGCTGATGAGTTCAAAGCTTCAAGAGCATTCTATGTTGGGTTTTGGCGGCTGTGGTGCTTATGCTGGTTTAGTAGTGGATGGTTTTCTGTTGCCTCAGATTTTACTCAACATGGTCTACAAATCGAAGGAAAGAGCTCTGTCAGTTTCATTTTATACTGGAACAACTTTTGTTCGAGTCCTGCCACATGCATATGATCTTTACAGGGTTCACATCTCTGGTGGGGTCTTGGCAGAGCCGTACATCTATGCAAGTCCTCTTGTTGCTTTTTACTCCACTGCTTGGGATGCCATCATTCCTATCGGAGGTCTACTGTTTGCTGTCATCATTTTCTTGCAGCAGAAGTATGGGGGTCGTTGCTTTCTTCCTGAAAAGTTAAGAGAGTCGGGTGCATATGAGAAAATTCCAGAAGTAATTGAAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

827

Amino Acids

92.4

Weight (kDa)

8.03

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 50 - 223 2.4e-22 DUF2921 lipocalin-like domain
DUF2921_N PF25333 274 - 416 6e-24 DUF2921 lipocalin-like domain
DUF2921_N PF25333 468 - 533 3.9e-17 DUF2921 lipocalin-like domain
DUF2921 PF11145 544 - 811 1.7e-56 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 285
AccB7I CCANNNNNTGG 2 cut(s) 987, 2340
AccI GTMKAC 3 cut(s) 1307, 2175, 2368
AccII CGCG 1 cut(s) 429
AccIII TCCGGA 1 cut(s) 1732
AciI CCGC 4 cut(s) 39, 246, 1870, 2106
AclWI GGATC 4 cut(s) 511, 638, 1571, 1965
AcsI RAATTY 9 cut(s) 23, 320, 386, 580, 821, 965, 1528, 1956, 2460
AcuI CTGAAG 1 cut(s) 581
AfaI GTAC 5 cut(s) 701, 810, 868, 1911, 2300
AfiI CCNNNNNNNGG 8 cut(s) 987, 1406, 1420, 1438, 1641, 1856, 2340, 2363
AflIII ACRYGT 1 cut(s) 1063
AhlI ACTAGT 1 cut(s) 587
AjiI CACGTC 2 cut(s) 287, 1738
AjnI CCWGG 4 cut(s) 11, 329, 409, 1153
AjuI GAANNNNNNNTTGG 4 cut(s) 1453, 1485, 1836, 1868
Alw21I GWGCWC 3 cut(s) 59, 306, 2197
Alw26I GTCTC 3 cut(s) 390, 1256, 1611
Alw44I GTGCAC 1 cut(s) 55
AlwI GGATC 4 cut(s) 511, 638, 1571, 1965
Aor13HI TCCGGA 1 cut(s) 1732
AoxI GGCC 2 cut(s) 999, 1505
ApaLI GTGCAC 1 cut(s) 55
ApeKI GCWGC 8 cut(s) 200, 1358, 1428, 1456, 1933, 1993, 2059, 2395
ApoI RAATTY 9 cut(s) 23, 320, 386, 580, 821, 965, 1528, 1956, 2460
AspLEI GCGC 1 cut(s) 1944
AspS9I GGNCC 1 cut(s) 999
AsuHPI GGTGA 5 cut(s) 215, 457, 542, 1133, 1832
BaeGI GKGCMC 3 cut(s) 59, 1197, 1340
BaeI ACNNNNGTAYC 2 cut(s) 974, 1007
BanII GRGCYC 2 cut(s) 1445, 2197
Bbv12I GWGCWC 3 cut(s) 59, 306, 2197
BbvI GCAGC 8 cut(s) 187, 1345, 1415, 1468, 1920, 2005, 2046, 2407
BccI CCATC 7 cut(s) 104, 414, 769, 1685, 1753, 2132, 2357
BceAI ACGGC 2 cut(s) 1742, 2281
BciT130I CCWGG 4 cut(s) 13, 331, 411, 1155
BclI TGATCA 3 cut(s) 154, 1591, 1837
BcoDI GTCTC 3 cut(s) 390, 1256, 1611
BcuI ACTAGT 1 cut(s) 587
BfaI CTAG 1 cut(s) 588
BfmI CTRYAG 1 cut(s) 1473
BisI GCNGC 9 cut(s) 201, 1359, 1429, 1457, 1934, 1994, 2060, 2107, 2396
BlsI GCNGC 9 cut(s) 202, 1360, 1430, 1458, 1935, 1995, 2061, 2108, 2397
Bme1390I CCNGG 4 cut(s) 13, 331, 411, 1155
BmgBI CACGTC 2 cut(s) 287, 1738
BmgT120I GGNCC 1 cut(s) 999
BmiI GGNNCC 1 cut(s) 613
BmrFI CCNGG 4 cut(s) 13, 331, 411, 1155
BmsI GCATC 4 cut(s) 742, 1078, 1738, 2335
BpmI CTGGAG 2 cut(s) 352, 1593
BpuEI CTTGAG 1 cut(s) 815
BsaBI GATNNNNATC 1 cut(s) 1635
BsaJI CCNNGG 1 cut(s) 1780
BsaWI WCCGGW 1 cut(s) 1732
Bsc4I CCNNNNNNNGG 8 cut(s) 987, 1406, 1420, 1438, 1641, 1856, 2340, 2363
Bse1I ACTGG 5 cut(s) 630, 697, 812, 992, 2221
Bse8I GATNNNNATC 1 cut(s) 1635
BseAI TCCGGA 1 cut(s) 1732
BseBI CCWGG 4 cut(s) 13, 331, 411, 1155
BseDI CCNNGG 1 cut(s) 1780
BseGI GGATG 8 cut(s) 119, 406, 1093, 1729, 1745, 2008, 2143, 2350
BseJI GATNNNNATC 1 cut(s) 1635
BseLI CCNNNNNNNGG 8 cut(s) 987, 1406, 1420, 1438, 1641, 1856, 2340, 2363
BseMII CTCAG 8 cut(s) 126, 168, 650, 813, 1130, 1382, 1898, 2168
BseNI ACTGG 5 cut(s) 630, 697, 812, 992, 2221
BseSI GKGCMC 3 cut(s) 59, 1197, 1340
BseXI GCAGC 8 cut(s) 187, 1345, 1415, 1468, 1920, 2005, 2046, 2407
Bsh1236I CGCG 1 cut(s) 429
BshFI GGCC 2 cut(s) 1001, 1507
BsiHKAI GWGCWC 3 cut(s) 59, 306, 2197
BsiSI CCGG 1 cut(s) 1733
BslI CCNNNNNNNGG 8 cut(s) 987, 1406, 1420, 1438, 1641, 1856, 2340, 2363
BsmAI GTCTC 3 cut(s) 390, 1256, 1611
BsmI GAATGC 4 cut(s) 264, 794, 1048, 2086
BsnI GGCC 2 cut(s) 1001, 1507
Bsp1286I GDGCHC 6 cut(s) 59, 306, 1197, 1340, 1445, 2197
Bsp13I TCCGGA 1 cut(s) 1732
Bsp68I TCGCGA 1 cut(s) 429
BspACI CCGC 4 cut(s) 39, 246, 1870, 2106
BspANI GGCC 2 cut(s) 1001, 1507
BspCNI CTCAG 8 cut(s) 125, 169, 649, 812, 1131, 1381, 1897, 2167
BspEI TCCGGA 1 cut(s) 1732
BspFNI CGCG 1 cut(s) 429
BspHI TCATGA 2 cut(s) 576, 1258
BspLI GGNNCC 1 cut(s) 613
BspPI GGATC 4 cut(s) 511, 638, 1571, 1965
BspQI GCTCTTC 2 cut(s) 561, 742
BsrI ACTGG 5 cut(s) 630, 697, 812, 992, 2221
BssECI CCNNGG 1 cut(s) 1780
BssNAI GTATAC 1 cut(s) 1308
BssT1I CCWWGG 1 cut(s) 1780
Bst1107I GTATAC 1 cut(s) 1308
Bst2UI CCWGG 4 cut(s) 13, 331, 411, 1155
Bst4CI ACNGT 6 cut(s) 161, 866, 1216, 1619, 1909, 2373
Bst6I CTCTTC 3 cut(s) 561, 742, 1587
BstC8I GCNNGC 2 cut(s) 431, 1686
BstENI CCTNNNNNAGG 3 cut(s) 1404, 1639, 2361
BstF5I GGATG 8 cut(s) 119, 406, 1093, 1729, 1745, 2008, 2143, 2350
BstFNI CGCG 1 cut(s) 429
BstHHI GCGC 1 cut(s) 1944
BstMAI GTCTC 3 cut(s) 390, 1256, 1611
BstMWI GCNNNNNNNGC 8 cut(s) 38, 1364, 1425, 1557, 1939, 1948, 2083, 2345
BstNI CCWGG 4 cut(s) 13, 331, 411, 1155
BstNSI RCATGY 3 cut(s) 1067, 1692, 2249
BstSCI CCNGG 4 cut(s) 11, 329, 409, 1153
BstSFI CTRYAG 1 cut(s) 1473
BstSLI GKGCMC 3 cut(s) 59, 1197, 1340
BstUI CGCG 1 cut(s) 429
BstV1I GCAGC 8 cut(s) 187, 1345, 1415, 1468, 1920, 2005, 2046, 2407
BstX2I RGATCY 2 cut(s) 643, 1970
BstYI RGATCY 2 cut(s) 643, 1970
BstZ17I GTATAC 1 cut(s) 1308
BsuRI GGCC 2 cut(s) 1001, 1507
BtrI CACGTC 2 cut(s) 287, 1738
BtsCI GGATG 8 cut(s) 119, 406, 1093, 1729, 1745, 2008, 2143, 2350
BtsI GCAGTG 2 cut(s) 259, 2334
BtsIMutI CAGTG 6 cut(s) 157, 259, 985, 1508, 1833, 2334
BtuMI TCGCGA 1 cut(s) 429
Cac8I GCNNGC 2 cut(s) 431, 1686
CciI TCATGA 2 cut(s) 576, 1258
CfoI GCGC 1 cut(s) 1944
Cfr13I GGNCC 1 cut(s) 999
Csp6I GTAC 5 cut(s) 700, 809, 867, 1910, 2299
CviQI GTAC 5 cut(s) 700, 809, 867, 1910, 2299
DraI TTTAAA 1 cut(s) 45
DrdI GACNNNNNNGTC 1 cut(s) 285
DseDI GACNNNNNNGTC 1 cut(s) 285
Eam1104I CTCTTC 3 cut(s) 561, 742, 1587
EarI CTCTTC 3 cut(s) 561, 742, 1587
Ecl136II GAGCTC 1 cut(s) 2195
Eco130I CCWWGG 1 cut(s) 1780
Eco24I GRGCYC 2 cut(s) 1445, 2197
Eco53kI GAGCTC 1 cut(s) 2195
Eco57I CTGAAG 1 cut(s) 581
EcoICRI GAGCTC 1 cut(s) 2195
EcoNI CCTNNNNNAGG 3 cut(s) 1404, 1639, 2361
EcoO109I RGGNCCY 1 cut(s) 999
EcoRI GAATTC 2 cut(s) 320, 1528
EcoRII CCWGG 4 cut(s) 11, 329, 409, 1153
EcoT14I CCWWGG 1 cut(s) 1780
EcoT22I ATGCAT 1 cut(s) 2251
EcoT38I GRGCYC 2 cut(s) 1445, 2197
ErhI CCWWGG 1 cut(s) 1780
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FauI CCCGC 2 cut(s) 239, 1863
FauNDI CATATG 2 cut(s) 2251, 2452
FbaI TGATCA 3 cut(s) 154, 1591, 1837
FblI GTMKAC 3 cut(s) 1307, 2175, 2368
Fnu4HI GCNGC 9 cut(s) 201, 1359, 1429, 1457, 1934, 1994, 2060, 2107, 2396
FokI GGATG 8 cut(s) 106, 393, 1100, 1716, 1732, 2015, 2150, 2357
FriOI GRGCYC 2 cut(s) 1445, 2197
Fsp4HI GCNGC 9 cut(s) 201, 1359, 1429, 1457, 1934, 1994, 2060, 2107, 2396
FspBI CTAG 1 cut(s) 588
GlaI GCGC 1 cut(s) 1943
GluI GCNGC 9 cut(s) 201, 1359, 1429, 1457, 1934, 1994, 2060, 2107, 2396
GsuI CTGGAG 2 cut(s) 352, 1593
HaeIII GGCC 2 cut(s) 1001, 1507
HapII CCGG 1 cut(s) 1733
HhaI GCGC 1 cut(s) 1944
Hin6I GCGC 1 cut(s) 1942
HinP1I GCGC 1 cut(s) 1942
HincII GTYRAC 1 cut(s) 290
HindII GTYRAC 1 cut(s) 290
HindIII AAGCTT 3 cut(s) 68, 488, 2075
HpaII CCGG 1 cut(s) 1733
HphI GGTGA 5 cut(s) 215, 457, 542, 1133, 1832
Hpy166II GTNNAC 7 cut(s) 57, 290, 702, 1308, 2176, 2269, 2369
Hpy8I GTNNAC 7 cut(s) 57, 290, 702, 1308, 2176, 2269, 2369
HpyAV CCTTC 5 cut(s) 939, 1400, 1635, 2008, 2179
HpyCH4III ACNGT 6 cut(s) 161, 866, 1216, 1619, 1909, 2373
HpyCH4IV ACGT 4 cut(s) 286, 417, 1737, 1795
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 1364, 1425, 1557, 1939, 1948, 2083, 2345
HpySE526I ACGT 4 cut(s) 286, 417, 1737, 1795
HspAI GCGC 1 cut(s) 1942
Kpn2I TCCGGA 1 cut(s) 1732
Ksp22I TGATCA 3 cut(s) 154, 1591, 1837
LguI GCTCTTC 2 cut(s) 561, 742
LmnI GCTCC 1 cut(s) 1203
Lsp1109I GCAGC 8 cut(s) 187, 1345, 1415, 1468, 1920, 2005, 2046, 2407
LweI GCATC 4 cut(s) 742, 1078, 1738, 2335
MaeI CTAG 1 cut(s) 588
MaeII ACGT 4 cut(s) 286, 417, 1737, 1795
MaeIII GTNAC 2 cut(s) 1216, 1324
MfeI CAATTG 4 cut(s) 168, 315, 1167, 1937
MflI RGATCY 2 cut(s) 643, 1970
MhlI GDGCHC 6 cut(s) 59, 306, 1197, 1340, 1445, 2197
MlyI GAGTC 3 cut(s) 188, 2244, 2450
MmeI TCCRAC 3 cut(s) 481, 1006, 1252
Mph1103I ATGCAT 1 cut(s) 2251
MroI TCCGGA 1 cut(s) 1732
MseI TTAA 5 cut(s) 44, 914, 1287, 1760, 2435
MslI CAYNNNNRTG 2 cut(s) 1119, 2250
MspI CCGG 1 cut(s) 1733
MspR9I CCNGG 4 cut(s) 13, 331, 411, 1155
MunI CAATTG 4 cut(s) 168, 315, 1167, 1937
Mva1269I GAATGC 4 cut(s) 264, 794, 1048, 2086
MvaI CCWGG 4 cut(s) 13, 331, 411, 1155
MvnI CGCG 1 cut(s) 429
MwoI GCNNNNNNNGC 8 cut(s) 38, 1364, 1425, 1557, 1939, 1948, 2083, 2345
NdeI CATATG 2 cut(s) 2251, 2452
NlaIV GGNNCC 1 cut(s) 613
NmuCI GTSAC 1 cut(s) 1216
NruI TCGCGA 1 cut(s) 429
NsiI ATGCAT 1 cut(s) 2251
NspI RCATGY 3 cut(s) 1067, 1692, 2249
PagI TCATGA 2 cut(s) 576, 1258
PciI ACATGT 1 cut(s) 1063
PciSI GCTCTTC 2 cut(s) 561, 742
PctI GAATGC 4 cut(s) 264, 794, 1048, 2086
PfeI GAWTC 8 cut(s) 209, 1080, 1223, 1469, 1486, 1631, 1666, 1983
PflMI CCANNNNNTGG 2 cut(s) 987, 2340
PfoI TCCNGGA 3 cut(s) 11, 409, 1153
PkrI GCNGC 9 cut(s) 202, 1360, 1430, 1458, 1935, 1995, 2061, 2108, 2397
PleI GAGTC 3 cut(s) 187, 2243, 2449
PpsI GAGTC 3 cut(s) 187, 2243, 2449
PscI ACATGT 1 cut(s) 1063
Psp124BI GAGCTC 1 cut(s) 2197
Psp6I CCWGG 4 cut(s) 11, 329, 409, 1153
PspGI CCWGG 4 cut(s) 11, 329, 409, 1153
PspN4I GGNNCC 1 cut(s) 613
PspPI GGNCC 1 cut(s) 999
PsuI RGATCY 2 cut(s) 643, 1970
RruI TCGCGA 1 cut(s) 429
RsaI GTAC 5 cut(s) 701, 810, 868, 1911, 2300
RsaNI GTAC 5 cut(s) 700, 809, 867, 1910, 2299
RseI CAYNNNNRTG 2 cut(s) 1119, 2250
SacI GAGCTC 1 cut(s) 2197
SapI GCTCTTC 2 cut(s) 561, 742
SaqAI TTAA 5 cut(s) 44, 914, 1287, 1760, 2435
SatI GCNGC 9 cut(s) 201, 1359, 1429, 1457, 1934, 1994, 2060, 2107, 2396
Sau96I GGNCC 1 cut(s) 999
SchI GAGTC 3 cut(s) 188, 2244, 2450
ScrFI CCNGG 4 cut(s) 13, 331, 411, 1155
SduI GDGCHC 6 cut(s) 59, 306, 1197, 1340, 1445, 2197
SfaNI GCATC 4 cut(s) 742, 1078, 1738, 2335
SfcI CTRYAG 1 cut(s) 1473
SmiMI CAYNNNNRTG 2 cut(s) 1119, 2250
SmlI CTYRAG 1 cut(s) 830
SmoI CTYRAG 1 cut(s) 830
SpeI ACTAGT 1 cut(s) 587
SsiI CCGC 4 cut(s) 39, 246, 1870, 2106
SspMI CTAG 1 cut(s) 588
SstI GAGCTC 1 cut(s) 2197
StyD4I CCNGG 4 cut(s) 11, 329, 409, 1153
StyI CCWWGG 1 cut(s) 1780
TaaI ACNGT 6 cut(s) 161, 866, 1216, 1619, 1909, 2373
TaiI ACGT 4 cut(s) 289, 420, 1740, 1798
TaqI TCGA 5 cut(s) 1078, 1639, 1653, 2183, 2233
TatI WGTACW 3 cut(s) 699, 866, 1909
TauI GCSGC 1 cut(s) 2109
TfiI GAWTC 8 cut(s) 209, 1080, 1223, 1469, 1486, 1631, 1666, 1983
Tru1I TTAA 5 cut(s) 44, 914, 1287, 1760, 2435
Tru9I TTAA 5 cut(s) 44, 914, 1287, 1760, 2435
TscAI CASTG 6 cut(s) 164, 259, 992, 1508, 1840, 2341
TseFI GTSAC 1 cut(s) 1216
TseI GCWGC 8 cut(s) 200, 1358, 1428, 1456, 1933, 1993, 2059, 2395
Tsp45I GTSAC 1 cut(s) 1216
TspRI CASTG 6 cut(s) 164, 259, 992, 1508, 1840, 2341
Van91I CCANNNNNTGG 2 cut(s) 987, 2340
VneI GTGCAC 1 cut(s) 55
XagI CCTNNNNNAGG 3 cut(s) 1404, 1639, 2361
XapI RAATTY 9 cut(s) 23, 320, 386, 580, 821, 965, 1528, 1956, 2460
XceI RCATGY 3 cut(s) 1067, 1692, 2249
XmiI GTMKAC 3 cut(s) 1307, 2175, 2368
XspI CTAG 1 cut(s) 588
Zsp2I ATGCAT 1 cut(s) 2251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.