Rw5G021550

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000420
Physical Location & Seq
Forward (+)
29005770 .. 29008473
2704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G021550.1

Sequence Viewer

Length: 2664 bp
ATGACTATCTTCAGAAAGCCAAAGCTGGTCATATTCTTCTTCTGTGTTTTCACCACCCTTTCTTTGAACTCAATCTCATCCTTTGCTCTACCTAAGAAAATCGCTTATGCTGATAATTGTGCTTCAGTTGTTCCCGAGTCAACCCTGAAAGCGGACAGCAGAGATCATCGCCATGAGTATCTCCATACAGGTTACTACTACACTGGTGGTGACGCTGGCAATGGTGGCCTTAGTCTTGAATTCAGTATCTGGAGTTTTGAAGAAACTGATGTACAAGGCTTGTTCAAGCTCCGAGCAAATCTTCAATTTCCAAAGGACAGAACGTATTACTACGTGGGGCCCTCCACAAGTAGTAGTAGCTCCAGGTCTCGATCAATTCATGCAGATGCAAGGTGGTCACTCAACTTTATATTCAACGGGTTCTGGTCAGAATCTTCAGGGAAGCTTTGTATGGTTGGATATGGTAGTTACTCGAAGAAAGGTACTTCACTCAGTTACCCTGCTATCCTTAAGCTCTATAATCTCTTCAATTCCACTAGTATTACAAGTTTGATTACTGGAACCATAGAGTCTTTGATCCCGAGTTCTGATATTGTCAAGGATCCAAGATATTTTGATCCAACCTCTATTTTGATGCTTCCTCGGATGAACTACCAGTACACTTTGGTTTCAAATAACTATACTGATGACACCTCTTCTGGTGACACTGATGATCATGATCCCTCGAGTTCTTTGAAATTAGATAACTTTTGTTCACAACTCTCAACAGTAGTACTAAAGAATGAGTTTGATCTCAGATATTCAAGGAAATGTGTTTCTGCAAGGAATTGTACTCCACTTGCTGGGCTAGATCCTTTGCCTCGACTCTGGTTTCAAAGGCCTTTCAATCCCAACACAACTCTGGTTGCGGAAGGCTCATGGGATGCAAAGAAAAATCAACTAGAATTTGTTGCTTGTCATTTCTTAGAGGCAGCAACAGATTCTTTCAATAATTCTCATGTGGGTGACTGTTCAAGAAGATTGAGCTTGAGATTTCCTGCAACATGGACAATCGGAAACACTAGTACCGTTGTGGGGCATATTTGGAGCAACAAATCCAAGACGGAGTCTGGTTACTTCGAAAAGATCAGATTCGAAACTTGTCAGCGTGAGGCTGGAAGGGTTGTAGTTCCAGGCACCAAATATGAGTATACAAAACTTGACCAAGTAAACAAGTTGTGCCCAAGAAAGAAGCCTGCTGCTAATGGTCACAAAACCAATGTGTACCCAAGTCCAATTTCTTATGACATGAGATTCGATATGTCAGCTAGAAGTTCTAAACCATATTTAGACGCATGGGGAAGTTCTGAACCTGTCTCTGTCGGCGATAGGATCTACGAGGAGCTTCCTTCTTCAACGCAATATAGTGGTTCAGCTGCAATCAGTGAAGATGAAAATTACTCTCTAGCGATAATTTCCAGCTACAACAACAGCAACCCGTCCAATATTAGCTACAGAATAAGCATTCAATTTCTGGAGCGGTCTGCTGGAAAGTTGGGCAACAAAATGAATATGACGGAAATGCATATCTCTGCTGAAGGGATATATGATGCAGAAGGAAGCCTGTGCATGGTAGGCTGCCGAAATGTTGACTTAAACAGTGATCACCAGACCACAGAAGATTTTGTAGATTGTGAGATCCTTGTCAATTTCCAGTTCCCTCCAGACAATCAACACAGTAAATATACAAGTTATATCAAGGTGAGGATTGAAAGCACACGAGAAAAGTCTGATCCTCTTCATTTCGAGCAATTGGATTTGTCATCAGTTGGTGGTTACATGATTGCAGCAGAACGATCCATCTGGAGGATGGACATGGAGATCATCTTGGTTCTTGTATCTACCACACTCGCATGTGTATTTGTGGCATTACAACAGTTTCATGTGAAAAAACATCCTGATGTGCTTCCCTCGATTTCCATCCTGATGCTACTGATTCTAACCGTTGGCTACATGATACCTCTTATGCTAAACTTTGATGCCATGTTCACTGACAACACCAACCGCCAATATGTGCCACTGGGAAGTGGTGGATGGCTTGCAGTTCATGAGGTAATTGTAAGGGTTATAACAATGATAGCTTTCTTGTTGCAATTCCGTCTTCTGCAGCAGACATGGTCGGCAAGATCAGCAAATGGGAAGCAAAAGGAGCTTTGGGATGTGGAGAAGAAGGTTTTACCGCTGTATCCAATTGGGTATTTAGTTGCTTGGGCAGTGCTTCCCATTTCTGTGGACTTGAAATCTTATGCTGGTTTGGTCTTGGACGGTTATCTGTTGCCTCAAATTCTACTCAACGTGGTCTGCAAATCAAAGGAAAAGGCTCTGTCTGTTTCATTCTATACTGGAACAACTTTGGTTCGAGTGCTGCCACATGCTTATGACCTTTACAGGACTCACAGCTCTGTTCATCAACAACTTGATGAGTCATACATTTATGCCAGTCCTGCTGGAGATTTCTACTCTACTTCGTGGGATGTAATTATTCCTATTGGAGGTCTACTGTTTTCTCTGATCATTTTCTTGCAGCAGAAGTTTGGAGGTCGTTGCTTTCTTCCTCAGAAGTTGAGAGAGCTGGGTTCATATGAGAAAGTCCCTTCGGTTAGTGAAGCCGAATTGCCAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

887

Amino Acids

99.82

Weight (kDa)

6.69

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 36 - 208 2.2e-18 DUF2921 lipocalin-like domain
DUF2921_N PF25333 243 - 376 4.6e-27 DUF2921 lipocalin-like domain
DUF2921_N PF25333 403 - 598 2e-28 DUF2921 lipocalin-like domain
DUF2921 PF11145 610 - 868 5.2e-62 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2108
AccB1I GGYRCC 1 cut(s) 1175
AccB7I CCANNNNNTGG 1 cut(s) 842
AccBSI CCGCTC 1 cut(s) 1519
AccI GTMKAC 2 cut(s) 1190, 2536
AciI CCGC 5 cut(s) 152, 908, 1519, 2044, 2219
AcsI RAATTY 3 cut(s) 239, 944, 2322
AcuI CTGAAG 3 cut(s) 108, 420, 1596
AfaI GTAC 7 cut(s) 273, 484, 659, 774, 832, 1066, 1265
AfiI CCNNNNNNNGG 6 cut(s) 151, 842, 1074, 1609, 1845, 2531
AflII CTTAAG 1 cut(s) 509
AhlI ACTAGT 2 cut(s) 536, 1061
AjnI CCWGG 2 cut(s) 362, 1171
AjuI GAANNNNNNNTTGG 2 cut(s) 1261, 1293
Alw26I GTCTC 2 cut(s) 372, 1360
AlwNI CAGNNNCTG 1 cut(s) 249
Ama87I CYCGRG 3 cut(s) 134, 580, 724
AoxI GGCC 3 cut(s) 226, 338, 878
ApaI GGGCCC 1 cut(s) 342
ApeKI GCWGC 8 cut(s) 971, 1238, 1415, 1617, 1826, 2146, 2404, 2563
ApoI RAATTY 3 cut(s) 239, 944, 2322
ArsI GACNNNNNNTTYG 2 cut(s) 1277, 1309
AspS9I GGNCC 2 cut(s) 338, 339
AsuHPI GGTGA 6 cut(s) 43, 221, 713, 1016, 1637, 1753
AsuII TTCGAA 2 cut(s) 1119, 1134
AvaI CYCGRG 3 cut(s) 134, 580, 724
BaeGI GKGCMC 2 cut(s) 342, 1223
BaeI ACNNNNGTAYC 4 cut(s) 1048, 1081, 2207, 2240
BamHI GGATCC 1 cut(s) 601
BanI GGYRCC 1 cut(s) 1175
BanII GRGCYC 1 cut(s) 342
BauI CACGAG 1 cut(s) 1758
BbsI GAAGAC 1 cut(s) 2132
BbvI GCAGC 8 cut(s) 983, 1225, 1402, 1604, 1838, 2158, 2391, 2575
BccI CCATC 4 cut(s) 1843, 1847, 1967, 2067
BciT130I CCWGG 2 cut(s) 364, 1173
BciVI GTATCC 1 cut(s) 2235
BclI TGATCA 3 cut(s) 712, 1642, 2550
BcoDI GTCTC 2 cut(s) 372, 1360
BcuI ACTAGT 2 cut(s) 536, 1061
BfaI CTAG 6 cut(s) 537, 848, 941, 1062, 1308, 1445
BfmI CTRYAG 2 cut(s) 1492, 2144
BfrI CTTAAG 1 cut(s) 509
BfuI GTATCC 1 cut(s) 2235
BisI GCNGC 8 cut(s) 972, 1239, 1416, 1618, 1827, 2147, 2405, 2564
BlsI GCNGC 8 cut(s) 973, 1240, 1417, 1619, 1828, 2148, 2406, 2565
BmcAI AGTACT 1 cut(s) 774
Bme1390I CCNGG 2 cut(s) 364, 1173
BmeT110I CYCGRG 3 cut(s) 134, 580, 724
BmgT120I GGNCC 2 cut(s) 338, 339
BmiI GGNNCC 5 cut(s) 339, 340, 562, 603, 1177
BmrFI CCNGG 2 cut(s) 364, 1173
BmrI ACTGGG 1 cut(s) 2069
BmsI GCATC 6 cut(s) 376, 624, 913, 1579, 1956, 2008
BmuI ACTGGG 1 cut(s) 2069
BpiI GAAGAC 1 cut(s) 2132
BpmI CTGGAG 6 cut(s) 271, 346, 1535, 1686, 1864, 2508
Bpu14I TTCGAA 2 cut(s) 1119, 1134
BpuEI CTTGAG 1 cut(s) 1048
BsaAI YACGTR 1 cut(s) 334
BsaBI GATNNNNATC 2 cut(s) 717, 1958
BsaI GGTCTC 1 cut(s) 372
BsaJI CCNNGG 1 cut(s) 641
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 842, 1074, 1609, 1845, 2531
Bse1I ACTGG 7 cut(s) 208, 562, 655, 1693, 2064, 2386, 2478
Bse3DI GCAATG 1 cut(s) 226
Bse8I GATNNNNATC 2 cut(s) 717, 1958
BseBI CCWGG 2 cut(s) 364, 1173
BseDI CCNNGG 1 cut(s) 641
BseGI GGATG 9 cut(s) 77, 651, 928, 1854, 1933, 1959, 2078, 2203, 2518
BseJI GATNNNNATC 2 cut(s) 717, 1958
BseLI CCNNNNNNNGG 6 cut(s) 151, 842, 1074, 1609, 1845, 2531
BseMI GCAATG 1 cut(s) 226
BseMII CTCAG 3 cut(s) 505, 808, 2609
BseNI ACTGG 7 cut(s) 208, 562, 655, 1693, 2064, 2386, 2478
BseRI GAGGAG 1 cut(s) 1394
BseSI GKGCMC 2 cut(s) 342, 1223
BseXI GCAGC 8 cut(s) 983, 1225, 1402, 1604, 1838, 2158, 2391, 2575
BseYI CCCAGC 2 cut(s) 842, 2611
BshFI GGCC 3 cut(s) 228, 340, 880
BshNI GGYRCC 1 cut(s) 1175
BsiHKCI CYCGRG 3 cut(s) 134, 580, 724
BslFI GGGAC 1 cut(s) 2615
BslI CCNNNNNNNGG 6 cut(s) 151, 842, 1074, 1609, 1845, 2531
BsmAI GTCTC 2 cut(s) 372, 1360
BsmFI GGGAC 1 cut(s) 2615
BsmI GAATGC 1 cut(s) 1503
BsnI GGCC 3 cut(s) 228, 340, 880
Bso31I GGTCTC 1 cut(s) 372
BsoBI CYCGRG 3 cut(s) 134, 580, 724
Bsp119I TTCGAA 2 cut(s) 1119, 1134
Bsp120I GGGCCC 1 cut(s) 338
Bsp1286I GDGCHC 2 cut(s) 342, 1223
Bsp1407I TGTACA 1 cut(s) 271
BspACI CCGC 5 cut(s) 152, 908, 1519, 2044, 2219
BspANI GGCC 3 cut(s) 228, 340, 880
BspCNI CTCAG 3 cut(s) 504, 807, 2608
BspHI TCATGA 2 cut(s) 715, 2086
BspLI GGNNCC 5 cut(s) 339, 340, 562, 603, 1177
BspMAI CTGCAG 1 cut(s) 2148
BspT104I TTCGAA 2 cut(s) 1119, 1134
BspT107I GGYRCC 1 cut(s) 1175
BspTI CTTAAG 1 cut(s) 509
BspTNI GGTCTC 1 cut(s) 372
BsrBI CCGCTC 1 cut(s) 1519
BsrDI GCAATG 1 cut(s) 226
BsrGI TGTACA 1 cut(s) 271
BsrI ACTGG 7 cut(s) 208, 562, 655, 1693, 2064, 2386, 2478
BssECI CCNNGG 1 cut(s) 641
BssNAI GTATAC 1 cut(s) 1191
BssSI CACGAG 1 cut(s) 1758
Bst1107I GTATAC 1 cut(s) 1191
Bst2BI CACGAG 1 cut(s) 1758
Bst2UI CCWGG 2 cut(s) 364, 1173
Bst4CI ACNGT 9 cut(s) 769, 1010, 1069, 1640, 1718, 1917, 1984, 2306, 2541
Bst6I CTCTTC 3 cut(s) 530, 700, 1782
BstAFI CTTAAG 1 cut(s) 509
BstAUI TGTACA 1 cut(s) 271
BstBAI YACGTR 1 cut(s) 334
BstBI TTCGAA 2 cut(s) 1119, 1134
BstC8I GCNNGC 3 cut(s) 217, 1236, 2079
BstDEI CTNAG 6 cut(s) 93, 230, 491, 794, 964, 2595
BstENI CCTNNNNNAGG 1 cut(s) 2529
BstF5I GGATG 9 cut(s) 77, 651, 928, 1854, 1933, 1959, 2078, 2203, 2518
BstMAI GTCTC 2 cut(s) 372, 1360
BstMWI GCNNNNNNNGC 5 cut(s) 225, 1614, 2168, 2188, 2483
BstNI CCWGG 2 cut(s) 364, 1173
BstNSI RCATGY 2 cut(s) 1896, 2414
BstSCI CCNGG 2 cut(s) 362, 1171
BstSFI CTRYAG 2 cut(s) 1492, 2144
BstSLI GKGCMC 2 cut(s) 342, 1223
BstV1I GCAGC 8 cut(s) 983, 1225, 1402, 1604, 1838, 2158, 2391, 2575
BstV2I GAAGAC 1 cut(s) 2132
BstX2I RGATCY 4 cut(s) 601, 850, 1371, 1677
BstXI CCANNNNNNTGG 1 cut(s) 2269
BstYI RGATCY 4 cut(s) 601, 850, 1371, 1677
BstZ17I GTATAC 1 cut(s) 1191
BsuI GTATCC 1 cut(s) 2235
BsuRI GGCC 3 cut(s) 228, 340, 880
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 9 cut(s) 77, 651, 928, 1854, 1933, 1959, 2078, 2203, 2518
BtsI GCAGTG 1 cut(s) 2259
BtsIMutI CAGTG 7 cut(s) 201, 705, 1429, 1645, 2028, 2057, 2259
Cac8I GCNNGC 3 cut(s) 217, 1236, 2079
CaiI CAGNNNCTG 1 cut(s) 249
CciI TCATGA 2 cut(s) 715, 2086
Cfr13I GGNCC 2 cut(s) 338, 339
CseI GACGC 2 cut(s) 221, 1340
Csp6I GTAC 7 cut(s) 272, 483, 658, 773, 831, 1065, 1264
CviQI GTAC 7 cut(s) 272, 483, 658, 773, 831, 1065, 1264
DdeI CTNAG 6 cut(s) 93, 230, 491, 794, 964, 2595
Eam1104I CTCTTC 3 cut(s) 530, 700, 1782
EarI CTCTTC 3 cut(s) 530, 700, 1782
Eco147I AGGCCT 1 cut(s) 880
Eco24I GRGCYC 1 cut(s) 342
Eco31I GGTCTC 1 cut(s) 372
Eco57I CTGAAG 3 cut(s) 108, 420, 1596
Eco88I CYCGRG 3 cut(s) 134, 580, 724
EcoNI CCTNNNNNAGG 1 cut(s) 2529
EcoO109I RGGNCCY 2 cut(s) 338, 339
EcoRI GAATTC 1 cut(s) 239
EcoRII CCWGG 2 cut(s) 362, 1171
EcoT22I ATGCAT 1 cut(s) 1566
EcoT38I GRGCYC 1 cut(s) 342
FaqI GGGAC 1 cut(s) 2615
FauNDI CATATG 1 cut(s) 2620
FbaI TGATCA 3 cut(s) 712, 1642, 2550
FblI GTMKAC 2 cut(s) 1190, 2536
Fnu4HI GCNGC 8 cut(s) 972, 1239, 1416, 1618, 1827, 2147, 2405, 2564
FokI GGATG 9 cut(s) 64, 658, 935, 1861, 1920, 1946, 2085, 2210, 2525
FriOI GRGCYC 1 cut(s) 342
Fsp4HI GCNGC 8 cut(s) 972, 1239, 1416, 1618, 1827, 2147, 2405, 2564
FspBI CTAG 6 cut(s) 537, 848, 941, 1062, 1308, 1445
GluI GCNGC 8 cut(s) 972, 1239, 1416, 1618, 1827, 2147, 2405, 2564
GsaI CCCAGC 2 cut(s) 846, 2615
GsuI CTGGAG 6 cut(s) 271, 346, 1535, 1686, 1864, 2508
HaeIII GGCC 3 cut(s) 228, 340, 880
HgaI GACGC 2 cut(s) 221, 1340
HincII GTYRAC 2 cut(s) 141, 1630
HindII GTYRAC 2 cut(s) 141, 1630
HindIII AAGCTT 1 cut(s) 443
HphI GGTGA 6 cut(s) 43, 221, 713, 1016, 1637, 1753
HpyAV CCTTC 7 cut(s) 905, 1152, 1398, 1571, 1589, 2203, 2643
HpyCH4III ACNGT 9 cut(s) 769, 1010, 1069, 1640, 1718, 1917, 1984, 2306, 2541
HpyCH4IV ACGT 3 cut(s) 323, 333, 2334
HpyF10VI GCNNNNNNNGC 5 cut(s) 225, 1614, 2168, 2188, 2483
HpyF3I CTNAG 6 cut(s) 93, 230, 491, 794, 964, 2595
HpySE526I ACGT 3 cut(s) 323, 333, 2334
Ksp22I TGATCA 3 cut(s) 712, 1642, 2550
LmnI GCTCC 6 cut(s) 294, 365, 1086, 1381, 1516, 2188
Lsp1109I GCAGC 8 cut(s) 983, 1225, 1402, 1604, 1838, 2158, 2391, 2575
LweI GCATC 6 cut(s) 376, 624, 913, 1579, 1956, 2008
MaeI CTAG 6 cut(s) 537, 848, 941, 1062, 1308, 1445
MaeII ACGT 3 cut(s) 323, 333, 2334
MbiI CCGCTC 1 cut(s) 1519
MfeI CAATTG 2 cut(s) 1790, 2229
MflI RGATCY 4 cut(s) 601, 850, 1371, 1677
MhlI GDGCHC 2 cut(s) 342, 1223
MlyI GAGTC 6 cut(s) 146, 578, 858, 1115, 2425, 2471
MmeI TCCRAC 2 cut(s) 436, 644
Mph1103I ATGCAT 1 cut(s) 1566
MseI TTAA 2 cut(s) 510, 1634
MslI CAYNNNNRTG 8 cut(s) 171, 384, 1002, 1891, 1938, 1964, 2267, 2415
MspA1I CMGCKG 2 cut(s) 1415, 2221
MspCI CTTAAG 1 cut(s) 509
MspR9I CCNGG 2 cut(s) 364, 1173
MunI CAATTG 2 cut(s) 1790, 2229
Mva1269I GAATGC 1 cut(s) 1503
MvaI CCWGG 2 cut(s) 364, 1173
MwoI GCNNNNNNNGC 5 cut(s) 225, 1614, 2168, 2188, 2483
NdeI CATATG 1 cut(s) 2620
NlaIV GGNNCC 5 cut(s) 339, 340, 562, 603, 1177
NmuCI GTSAC 5 cut(s) 209, 396, 701, 1004, 1247
NsiI ATGCAT 1 cut(s) 1566
NspI RCATGY 2 cut(s) 1896, 2414
NspV TTCGAA 2 cut(s) 1119, 1134
PaeR7I CTCGAG 1 cut(s) 724
PagI TCATGA 2 cut(s) 715, 2086
PceI AGGCCT 1 cut(s) 880
PctI GAATGC 1 cut(s) 1503
PfeI GAWTC 5 cut(s) 431, 980, 1131, 1293, 1975
PflFI GACNNNGTC 2 cut(s) 1105, 2155
PflMI CCANNNNNTGG 1 cut(s) 842
PkrI GCNGC 8 cut(s) 973, 1240, 1417, 1619, 1828, 2148, 2406, 2565
PleI GAGTC 6 cut(s) 145, 577, 858, 1114, 2425, 2470
PpsI GAGTC 6 cut(s) 145, 577, 858, 1114, 2425, 2470
Ppu21I YACGTR 1 cut(s) 334
PsiI TTATAA 1 cut(s) 2108
Psp6I CCWGG 2 cut(s) 362, 1171
PspFI CCCAGC 2 cut(s) 842, 2611
PspGI CCWGG 2 cut(s) 362, 1171
PspN4I GGNNCC 5 cut(s) 339, 340, 562, 603, 1177
PspOMI GGGCCC 1 cut(s) 338
PspPI GGNCC 2 cut(s) 338, 339
PspXI VCTCGAGB 1 cut(s) 724
PsrI GAACNNNNNNTAC 2 cut(s) 641, 673
PstI CTGCAG 1 cut(s) 2148
PstNI CAGNNNCTG 1 cut(s) 249
PsuI RGATCY 4 cut(s) 601, 850, 1371, 1677
PsyI GACNNNGTC 2 cut(s) 1105, 2155
PvuII CAGCTG 1 cut(s) 1415
RsaI GTAC 7 cut(s) 273, 484, 659, 774, 832, 1066, 1265
RsaNI GTAC 7 cut(s) 272, 483, 658, 773, 831, 1065, 1264
RseI CAYNNNNRTG 8 cut(s) 171, 384, 1002, 1891, 1938, 1964, 2267, 2415
SaqAI TTAA 2 cut(s) 510, 1634
SatI GCNGC 8 cut(s) 972, 1239, 1416, 1618, 1827, 2147, 2405, 2564
Sau96I GGNCC 2 cut(s) 338, 339
ScaI AGTACT 1 cut(s) 774
SchI GAGTC 6 cut(s) 146, 578, 858, 1115, 2425, 2471
ScrFI CCNGG 2 cut(s) 364, 1173
SduI GDGCHC 2 cut(s) 342, 1223
SfaNI GCATC 6 cut(s) 376, 624, 913, 1579, 1956, 2008
SfcI CTRYAG 2 cut(s) 1492, 2144
Sfr274I CTCGAG 1 cut(s) 724
SfuI TTCGAA 2 cut(s) 1119, 1134
SlaI CTCGAG 1 cut(s) 724
SmiMI CAYNNNNRTG 8 cut(s) 171, 384, 1002, 1891, 1938, 1964, 2267, 2415
SmlI CTYRAG 3 cut(s) 509, 724, 1027
SmoI CTYRAG 3 cut(s) 509, 724, 1027
SpeI ACTAGT 2 cut(s) 536, 1061
SseBI AGGCCT 1 cut(s) 880
SsiI CCGC 5 cut(s) 152, 908, 1519, 2044, 2219
SspI AATATT 1 cut(s) 1486
SspMI CTAG 6 cut(s) 537, 848, 941, 1062, 1308, 1445
StuI AGGCCT 1 cut(s) 880
StyD4I CCNGG 2 cut(s) 362, 1171
TaaI ACNGT 9 cut(s) 769, 1010, 1069, 1640, 1718, 1917, 1984, 2306, 2541
TaiI ACGT 3 cut(s) 326, 336, 2337
TatI WGTACW 4 cut(s) 271, 657, 772, 830
TfiI GAWTC 5 cut(s) 431, 980, 1131, 1293, 1975
Tru1I TTAA 2 cut(s) 510, 1634
Tru9I TTAA 2 cut(s) 510, 1634
TscAI CASTG 7 cut(s) 208, 712, 1429, 1645, 2035, 2064, 2259
TseFI GTSAC 5 cut(s) 209, 396, 701, 1004, 1247
TseI GCWGC 8 cut(s) 971, 1238, 1415, 1617, 1826, 2146, 2404, 2563
Tsp45I GTSAC 5 cut(s) 209, 396, 701, 1004, 1247
TspGWI ACGGA 3 cut(s) 1118, 1571, 2126
TspRI CASTG 7 cut(s) 208, 712, 1429, 1645, 2035, 2064, 2259
Tth111I GACNNNGTC 2 cut(s) 1105, 2155
Van91I CCANNNNNTGG 1 cut(s) 842
Vha464I CTTAAG 1 cut(s) 509
XagI CCTNNNNNAGG 1 cut(s) 2529
XapI RAATTY 3 cut(s) 239, 944, 2322
XceI RCATGY 2 cut(s) 1896, 2414
XcmI CCANNNNNNNNNTGG 2 cut(s) 898, 1846
XhoI CTCGAG 1 cut(s) 724
XmiI GTMKAC 2 cut(s) 1190, 2536
XspI CTAG 6 cut(s) 537, 848, 941, 1062, 1308, 1445
ZrmI AGTACT 1 cut(s) 774
Zsp2I ATGCAT 1 cut(s) 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.