RchiOBHm_Chr5g0034201

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000420
Physical Location & Seq
Reverse (-)
28093655 .. 28096375
2721 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31323

Sequence Viewer

Length: 2721 bp
ATGCCTATGTCCAGGAAGTATAAATTTTCTGCTACCACCGCTTTAAAGATGTGGTGCACTCTGCCAAAGCTTCTCATATTCTTCTTTGTTTTCGCCATCTTTTCTTTGAACTCAGTTTCATCCTCTGCTACACCTGATGAACTCACTTATGCTGATCACTGTGCTTCAATTGTTCCTGAGTCAAACCCGAAAAGATATGCTGCATTAGATTCCTCTGTCTTTCACCATACAGGTTTCTATATTGGCGGGGGCAGTGGTGGTGGCATTCGTAGTCCAAGACCAGCACGTCAACTTCATTATGAGCACCCAAATCCAATTGAATTCAATGCCTGGAGTGTCAGAGAAACTGACATACAAAACTTATTCAATGTTCAAGGAAGTCTTGAATTTGAGAGAGACAATTACCATCCTGGAAACGTCAGAAGTCGCGAGCCTCAAAGTTCGGTGAGGTTTGAACTTAGTGGGTTCTGGTCAATATCTTCTGGAAAGCTTTGCATGGTTGGATCAGGTTCTATTTACTTGAAACAAGGTGATCTGCTTATTGATGTTCCTGCTCTTCTGAAGTTGAATAATCTCATGAATTTCACTAGTATTTCAAGTCTGATTAGTGGAACCTTAGAGAGCTTGACCAGTTCTCAGAAAGATCCCAATTATTTTGAACCAATCTCTATGCTGATACTTCCTCGTATAAACTACCAGTACACTTTGGTTTCAAATATATCTGATGATGACAGCTCTTCTGGTGGAAGTGATGCCCTCTTGGGTTCTTTGCAGATGGAGAAGTTTTGCTCTGCATTCTCAGGAGTAGTACCAGTCCATGAATTTGATCTCAAGTATTTGAGCCATTGTCTTTCTGCAAAGAACTGTACTACTCCACTTTCTGTGTCTGGTCTTTTGCCTCGCATTGTCGCATTAAGGGATATTGAGTGTTTGGAAGATCAAAGAAGGTTGAGAGTTCTGGTAGAATTTTCAGACAAGACCAAACACTGGTATCATAGGGCCTTATATCCCAATACAACCTTTGTTGGAGAGGGGTCATGGAATGCAAAGAAAAATCAGCTACATGTGGTTGCTTGTCGATTCTTGGATGCAACACATCTTGTCAATAATTCTCATGTGGGTGATTGTTCAATAGGACTGAGTTTGTCATTTCCTGGAATATGGACAATTGGAGATACCAGAAGCACAGCAGGGCACATTTGGAGCAACAAAACTGTCACAGAATCGGGCTACTTTGAGAATATAACATTTGAAAGTCATGAGACTTATGTTGGAGGTGTTCTACTTAAAGGTCAGAAATATGAGTATACCCAAATTGACAAAGTAACCAAGTTGTGCCCCAGAAGAAACAGGACTGCTGCTAATGCTCAGAACACCAACTTATCCCCAAATCCATTTCCTTATGGTTTGAGATTTAATATGGCTGCTAGAAAATCTGAAGGGGAAGTTGAATGGGGTTATTTCTCTCCTCTTTCTGTTGGAAATCAATTGTATGGACCGGAATCATATTCAATTAGAGATACAGACTCAATTGAGTATAACAACAGCAGCCCCTACAGTATTAGCTACCAAATATTCATCGATTTGGGCAGTACATCAGTTACAAATCTGATTTCTGCTGAAGGGATCTATGATTATACAGAAGGAAGCCTGTGCATGGTAGGCTGCCGAAATGTGGGCTCAACAGATCAGCAGCCAATAAATGATTCTGTAGATTGTGAGATTCTACTCAATTTTCAGTGGCCTCCAAATCCAGCGAGGAAGAATTCAGGTTTCTTCAAGGGAAGCATTGTAAGCACACGGGAAAAGTCTGATCCTCTTCATTTTGATCATATAGAATTGTCTCCAGCTCACAGTTTCATAGCTGATTCCTATCGAAGGGTGGAGGTCGAGGTCATCTTGATTCTTATGACCATCACGCTTGCATGTGTTTTTGGGGCATTACAACTTTTTCATGTGAAACGGCATCCGGACGTGCTTCCATCCATATCAATCTTAATGGTAGTAATTCTAACCCTTGGCTACATGATACGTCTTATGTATTACTTTGAAGCGATCTTCATGGATAACACTGATCACCAAAACCCTTTTCTTGGAAGTGGTGGGCGGGTTCAACTTTCTCAGTTCATTGTAAGAGTAATAACAGTACAAACAATGGTAGCTTTCTTGCTGCAATTGCGCCTTTTGCAGAAAATTTGGTCAGCAAGATCCACTAAAGGAATCTATAAGCAGCTTTGGGATGTGGAGAAGAAGGCTGTATCAATATATGCCATAGGGGTTTTAGTTGCTATGGTGCTGCTGATGAGTTCAAAGCTTCAAGAGCATTCTATGTTGGGTTTTGGCGGCTGTGGTGCTTATGCTGGTTTAGTAGTGGATGGTTTTCTGTTGCCTCAGATTTTACTCAACATGGTCTACAAATCGAAGGAAAGAGCTCTGTCAGTTTCATTTTATACTGGAACAACTTTTGTTCGAGTCCTGCCACATGCATATGATCTTTACAGGGTTCACATCTCTGGTGGGGTCTTGGCAGAGCCGTACATCTATGCAAGTCCTCTTGTTGCTTTTTACTCCACTGCTTGGGATGCCATCATTCCTATCGGAGGTCTACTGTTTGCTGTCATCATTTTCTTGCAGCAGAAGTATGGGGGTCGTTGCTTTCTTCCTGAAAAGTTAAGAGAGTCGGGTGCATATGAGAAAATTCCAGAAGTAATTGAAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

906

Amino Acids

101.21

Weight (kDa)

6.78

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 50 - 223 2.8e-22 DUF2921 lipocalin-like domain
DUF2921_N PF25333 274 - 416 6.8e-24 DUF2921 lipocalin-like domain
DUF2921_N PF25333 443 - 612 4.7e-26 DUF2921 lipocalin-like domain
DUF2921 PF11145 623 - 890 2e-56 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 285
AccB7I CCANNNNNTGG 2 cut(s) 987, 2577
AccI GTMKAC 3 cut(s) 1307, 2412, 2605
AccII CGCG 1 cut(s) 429
AccIII TCCGGA 1 cut(s) 1969
AciI CCGC 4 cut(s) 39, 246, 2107, 2343
AclWI GGATC 5 cut(s) 511, 638, 1634, 1808, 2202
AcsI RAATTY 9 cut(s) 23, 320, 386, 580, 821, 965, 1765, 2193, 2697
AcuI CTGAAG 3 cut(s) 581, 1458, 1641
AfaI GTAC 6 cut(s) 701, 810, 868, 1594, 2148, 2537
AfiI CCNNNNNNNGG 7 cut(s) 987, 1657, 1675, 1878, 2093, 2577, 2600
AflIII ACRYGT 1 cut(s) 1063
AhlI ACTAGT 1 cut(s) 587
AjiI CACGTC 2 cut(s) 287, 1975
AjnI CCWGG 4 cut(s) 11, 329, 409, 1153
AjuI GAANNNNNNNTTGG 4 cut(s) 1690, 1722, 2073, 2105
Alw21I GWGCWC 3 cut(s) 59, 306, 2434
Alw26I GTCTC 3 cut(s) 390, 1256, 1848
Alw44I GTGCAC 1 cut(s) 55
AlwI GGATC 5 cut(s) 511, 638, 1634, 1808, 2202
Aor13HI TCCGGA 1 cut(s) 1969
AoxI GGCC 2 cut(s) 999, 1742
ApaLI GTGCAC 1 cut(s) 55
ApoI RAATTY 9 cut(s) 23, 320, 386, 580, 821, 965, 1765, 2193, 2697
AspLEI GCGC 1 cut(s) 2181
AspS9I GGNCC 2 cut(s) 999, 1496
AsuHPI GGTGA 5 cut(s) 215, 457, 542, 1133, 2069
AvaII GGWCC 1 cut(s) 1496
BaeGI GKGCMC 3 cut(s) 59, 1197, 1340
BaeI ACNNNNGTAYC 2 cut(s) 974, 1007
BanII GRGCYC 2 cut(s) 1682, 2434
Bbv12I GWGCWC 3 cut(s) 59, 306, 2434
BccI CCATC 7 cut(s) 104, 414, 769, 1922, 1990, 2369, 2594
BceAI ACGGC 2 cut(s) 1979, 2518
BciT130I CCWGG 4 cut(s) 13, 331, 411, 1155
BclI TGATCA 3 cut(s) 154, 1828, 2074
BcoDI GTCTC 3 cut(s) 390, 1256, 1848
BcuI ACTAGT 1 cut(s) 587
BfaI CTAG 2 cut(s) 588, 1428
BfmI CTRYAG 2 cut(s) 1555, 1710
Bme1390I CCNGG 4 cut(s) 13, 331, 411, 1155
Bme18I GGWCC 1 cut(s) 1496
BmgBI CACGTC 2 cut(s) 287, 1975
BmgT120I GGNCC 2 cut(s) 999, 1496
BmiI GGNNCC 1 cut(s) 613
BmrFI CCNGG 4 cut(s) 13, 331, 411, 1155
BmsI GCATC 4 cut(s) 742, 1078, 1975, 2572
BpmI CTGGAG 2 cut(s) 352, 1830
BpuEI CTTGAG 1 cut(s) 815
Bsa29I ATCGAT 1 cut(s) 1581
BsaBI GATNNNNATC 1 cut(s) 1872
BsaJI CCNNGG 1 cut(s) 2017
BsaWI WCCGGW 2 cut(s) 1498, 1969
Bsc4I CCNNNNNNNGG 7 cut(s) 987, 1657, 1675, 1878, 2093, 2577, 2600
Bse1I ACTGG 5 cut(s) 630, 697, 812, 992, 2458
Bse8I GATNNNNATC 1 cut(s) 1872
BseAI TCCGGA 1 cut(s) 1969
BseBI CCWGG 4 cut(s) 13, 331, 411, 1155
BseCI ATCGAT 1 cut(s) 1581
BseDI CCNNGG 1 cut(s) 2017
BseGI GGATG 8 cut(s) 119, 406, 1093, 1966, 1982, 2245, 2380, 2587
BseJI GATNNNNATC 1 cut(s) 1872
BseLI CCNNNNNNNGG 7 cut(s) 987, 1657, 1675, 1878, 2093, 2577, 2600
BseMII CTCAG 8 cut(s) 126, 168, 650, 813, 1130, 1382, 2135, 2405
BseNI ACTGG 5 cut(s) 630, 697, 812, 992, 2458
BseRI GAGGAG 1 cut(s) 1458
BseSI GKGCMC 3 cut(s) 59, 1197, 1340
Bsh1236I CGCG 1 cut(s) 429
BshFI GGCC 2 cut(s) 1001, 1744
BshVI ATCGAT 1 cut(s) 1581
BsiHKAI GWGCWC 3 cut(s) 59, 306, 2434
BsiSI CCGG 2 cut(s) 1499, 1970
BslI CCNNNNNNNGG 7 cut(s) 987, 1657, 1675, 1878, 2093, 2577, 2600
BsmAI GTCTC 3 cut(s) 390, 1256, 1848
BsmI GAATGC 4 cut(s) 264, 794, 1048, 2323
BsnI GGCC 2 cut(s) 1001, 1744
Bsp1286I GDGCHC 6 cut(s) 59, 306, 1197, 1340, 1682, 2434
Bsp13I TCCGGA 1 cut(s) 1969
Bsp68I TCGCGA 1 cut(s) 429
BspACI CCGC 4 cut(s) 39, 246, 2107, 2343
BspANI GGCC 2 cut(s) 1001, 1744
BspCNI CTCAG 8 cut(s) 125, 169, 649, 812, 1131, 1381, 2134, 2404
BspDI ATCGAT 1 cut(s) 1581
BspEI TCCGGA 1 cut(s) 1969
BspFNI CGCG 1 cut(s) 429
BspHI TCATGA 2 cut(s) 576, 1258
BspLI GGNNCC 1 cut(s) 613
BspPI GGATC 5 cut(s) 511, 638, 1634, 1808, 2202
BspQI GCTCTTC 2 cut(s) 561, 742
BsrI ACTGG 5 cut(s) 630, 697, 812, 992, 2458
BssECI CCNNGG 1 cut(s) 2017
BssNAI GTATAC 1 cut(s) 1308
BssT1I CCWWGG 1 cut(s) 2017
Bst1107I GTATAC 1 cut(s) 1308
Bst2UI CCWGG 4 cut(s) 13, 331, 411, 1155
Bst4CI ACNGT 7 cut(s) 161, 866, 1216, 1559, 1856, 2146, 2610
Bst6I CTCTTC 3 cut(s) 561, 742, 1824
BstC8I GCNNGC 2 cut(s) 431, 1923
BstENI CCTNNNNNAGG 2 cut(s) 1876, 2598
BstF5I GGATG 8 cut(s) 119, 406, 1093, 1966, 1982, 2245, 2380, 2587
BstFNI CGCG 1 cut(s) 429
BstHHI GCGC 1 cut(s) 2181
BstMAI GTCTC 3 cut(s) 390, 1256, 1848
BstMWI GCNNNNNNNGC 8 cut(s) 38, 1364, 1662, 1794, 2176, 2185, 2320, 2582
BstNI CCWGG 4 cut(s) 13, 331, 411, 1155
BstNSI RCATGY 3 cut(s) 1067, 1929, 2486
BstSCI CCNGG 4 cut(s) 11, 329, 409, 1153
BstSFI CTRYAG 2 cut(s) 1555, 1710
BstSLI GKGCMC 3 cut(s) 59, 1197, 1340
BstUI CGCG 1 cut(s) 429
BstX2I RGATCY 3 cut(s) 643, 1626, 2207
BstYI RGATCY 3 cut(s) 643, 1626, 2207
BstZ17I GTATAC 1 cut(s) 1308
Bsu15I ATCGAT 1 cut(s) 1581
BsuRI GGCC 2 cut(s) 1001, 1744
BsuTUI ATCGAT 1 cut(s) 1581
BtrI CACGTC 2 cut(s) 287, 1975
BtsCI GGATG 8 cut(s) 119, 406, 1093, 1966, 1982, 2245, 2380, 2587
BtsI GCAGTG 2 cut(s) 259, 2571
BtsIMutI CAGTG 6 cut(s) 157, 259, 985, 1745, 2070, 2571
BtuMI TCGCGA 1 cut(s) 429
Cac8I GCNNGC 2 cut(s) 431, 1923
CciI TCATGA 2 cut(s) 576, 1258
CfoI GCGC 1 cut(s) 2181
Cfr13I GGNCC 2 cut(s) 999, 1496
ClaI ATCGAT 1 cut(s) 1581
Csp6I GTAC 6 cut(s) 700, 809, 867, 1593, 2147, 2536
CviQI GTAC 6 cut(s) 700, 809, 867, 1593, 2147, 2536
DraI TTTAAA 1 cut(s) 45
DrdI GACNNNNNNGTC 1 cut(s) 285
DseDI GACNNNNNNGTC 1 cut(s) 285
Eam1104I CTCTTC 3 cut(s) 561, 742, 1824
EarI CTCTTC 3 cut(s) 561, 742, 1824
Ecl136II GAGCTC 1 cut(s) 2432
Eco130I CCWWGG 1 cut(s) 2017
Eco24I GRGCYC 2 cut(s) 1682, 2434
Eco47I GGWCC 1 cut(s) 1496
Eco53kI GAGCTC 1 cut(s) 2432
Eco57I CTGAAG 3 cut(s) 581, 1458, 1641
EcoICRI GAGCTC 1 cut(s) 2432
EcoNI CCTNNNNNAGG 2 cut(s) 1876, 2598
EcoO109I RGGNCCY 1 cut(s) 999
EcoRI GAATTC 2 cut(s) 320, 1765
EcoRII CCWGG 4 cut(s) 11, 329, 409, 1153
EcoT14I CCWWGG 1 cut(s) 2017
EcoT22I ATGCAT 1 cut(s) 2488
EcoT38I GRGCYC 2 cut(s) 1682, 2434
ErhI CCWWGG 1 cut(s) 2017
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FauI CCCGC 2 cut(s) 239, 2100
FauNDI CATATG 2 cut(s) 2488, 2689
FbaI TGATCA 3 cut(s) 154, 1828, 2074
FblI GTMKAC 3 cut(s) 1307, 2412, 2605
FokI GGATG 8 cut(s) 106, 393, 1100, 1953, 1969, 2252, 2387, 2594
FriOI GRGCYC 2 cut(s) 1682, 2434
FspBI CTAG 2 cut(s) 588, 1428
GlaI GCGC 1 cut(s) 2180
GsuI CTGGAG 2 cut(s) 352, 1830
HaeIII GGCC 2 cut(s) 1001, 1744
HapII CCGG 2 cut(s) 1499, 1970
HhaI GCGC 1 cut(s) 2181
Hin6I GCGC 1 cut(s) 2179
HinP1I GCGC 1 cut(s) 2179
HincII GTYRAC 1 cut(s) 290
HindII GTYRAC 1 cut(s) 290
HindIII AAGCTT 3 cut(s) 68, 488, 2312
HpaII CCGG 2 cut(s) 1499, 1970
HphI GGTGA 5 cut(s) 215, 457, 542, 1133, 2069
Hpy166II GTNNAC 7 cut(s) 57, 290, 702, 1308, 2413, 2506, 2606
Hpy8I GTNNAC 7 cut(s) 57, 290, 702, 1308, 2413, 2506, 2606
HpyAV CCTTC 7 cut(s) 939, 1433, 1616, 1637, 1872, 2245, 2416
HpyCH4III ACNGT 7 cut(s) 161, 866, 1216, 1559, 1856, 2146, 2610
HpyCH4IV ACGT 4 cut(s) 286, 417, 1974, 2032
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 1364, 1662, 1794, 2176, 2185, 2320, 2582
HpySE526I ACGT 4 cut(s) 286, 417, 1974, 2032
HspAI GCGC 1 cut(s) 2179
Kpn2I TCCGGA 1 cut(s) 1969
Ksp22I TGATCA 3 cut(s) 154, 1828, 2074
LguI GCTCTTC 2 cut(s) 561, 742
LmnI GCTCC 1 cut(s) 1203
LweI GCATC 4 cut(s) 742, 1078, 1975, 2572
MaeI CTAG 2 cut(s) 588, 1428
MaeII ACGT 4 cut(s) 286, 417, 1974, 2032
MaeIII GTNAC 3 cut(s) 1216, 1324, 1600
MfeI CAATTG 6 cut(s) 168, 315, 1167, 1487, 1530, 2174
MflI RGATCY 3 cut(s) 643, 1626, 2207
MhlI GDGCHC 6 cut(s) 59, 306, 1197, 1340, 1682, 2434
MlyI GAGTC 4 cut(s) 188, 1520, 2481, 2687
MmeI TCCRAC 4 cut(s) 481, 1006, 1252, 1459
Mph1103I ATGCAT 1 cut(s) 2488
MroI TCCGGA 1 cut(s) 1969
MseI TTAA 6 cut(s) 44, 914, 1287, 1416, 1997, 2672
MslI CAYNNNNRTG 2 cut(s) 1119, 2487
MspI CCGG 2 cut(s) 1499, 1970
MspR9I CCNGG 4 cut(s) 13, 331, 411, 1155
MunI CAATTG 6 cut(s) 168, 315, 1167, 1487, 1530, 2174
Mva1269I GAATGC 4 cut(s) 264, 794, 1048, 2323
MvaI CCWGG 4 cut(s) 13, 331, 411, 1155
MvnI CGCG 1 cut(s) 429
MwoI GCNNNNNNNGC 8 cut(s) 38, 1364, 1662, 1794, 2176, 2185, 2320, 2582
NdeI CATATG 2 cut(s) 2488, 2689
NlaIV GGNNCC 1 cut(s) 613
NmuCI GTSAC 1 cut(s) 1216
NruI TCGCGA 1 cut(s) 429
NsiI ATGCAT 1 cut(s) 2488
NspI RCATGY 3 cut(s) 1067, 1929, 2486
PagI TCATGA 2 cut(s) 576, 1258
PciI ACATGT 1 cut(s) 1063
PciSI GCTCTTC 2 cut(s) 561, 742
PctI GAATGC 4 cut(s) 264, 794, 1048, 2323
PfeI GAWTC 9 cut(s) 209, 1080, 1223, 1502, 1706, 1723, 1868, 1903, 2220
PflMI CCANNNNNTGG 2 cut(s) 987, 2577
PfoI TCCNGGA 3 cut(s) 11, 409, 1153
PleI GAGTC 4 cut(s) 187, 1520, 2480, 2686
PpsI GAGTC 4 cut(s) 187, 1520, 2480, 2686
PscI ACATGT 1 cut(s) 1063
Psp124BI GAGCTC 1 cut(s) 2434
Psp6I CCWGG 4 cut(s) 11, 329, 409, 1153
PspGI CCWGG 4 cut(s) 11, 329, 409, 1153
PspN4I GGNNCC 1 cut(s) 613
PspPI GGNCC 2 cut(s) 999, 1496
PsuI RGATCY 3 cut(s) 643, 1626, 2207
RruI TCGCGA 1 cut(s) 429
RsaI GTAC 6 cut(s) 701, 810, 868, 1594, 2148, 2537
RsaNI GTAC 6 cut(s) 700, 809, 867, 1593, 2147, 2536
RseI CAYNNNNRTG 2 cut(s) 1119, 2487
SacI GAGCTC 1 cut(s) 2434
SapI GCTCTTC 2 cut(s) 561, 742
SaqAI TTAA 6 cut(s) 44, 914, 1287, 1416, 1997, 2672
Sau96I GGNCC 2 cut(s) 999, 1496
SchI GAGTC 4 cut(s) 188, 1520, 2481, 2687
ScrFI CCNGG 4 cut(s) 13, 331, 411, 1155
SduI GDGCHC 6 cut(s) 59, 306, 1197, 1340, 1682, 2434
SfaNI GCATC 4 cut(s) 742, 1078, 1975, 2572
SfcI CTRYAG 2 cut(s) 1555, 1710
SinI GGWCC 1 cut(s) 1496
SmiMI CAYNNNNRTG 2 cut(s) 1119, 2487
SmlI CTYRAG 1 cut(s) 830
SmoI CTYRAG 1 cut(s) 830
SpeI ACTAGT 1 cut(s) 587
SsiI CCGC 4 cut(s) 39, 246, 2107, 2343
SspI AATATT 1 cut(s) 1575
SspMI CTAG 2 cut(s) 588, 1428
SstI GAGCTC 1 cut(s) 2434
StyD4I CCNGG 4 cut(s) 11, 329, 409, 1153
StyI CCWWGG 1 cut(s) 2017
TaaI ACNGT 7 cut(s) 161, 866, 1216, 1559, 1856, 2146, 2610
TaiI ACGT 4 cut(s) 289, 420, 1977, 2035
TaqI TCGA 6 cut(s) 1078, 1581, 1876, 1890, 2420, 2470
TatI WGTACW 4 cut(s) 699, 866, 1592, 2146
TauI GCSGC 1 cut(s) 2346
TfiI GAWTC 9 cut(s) 209, 1080, 1223, 1502, 1706, 1723, 1868, 1903, 2220
Tru1I TTAA 6 cut(s) 44, 914, 1287, 1416, 1997, 2672
Tru9I TTAA 6 cut(s) 44, 914, 1287, 1416, 1997, 2672
TscAI CASTG 6 cut(s) 164, 259, 992, 1745, 2077, 2578
TseFI GTSAC 1 cut(s) 1216
Tsp45I GTSAC 1 cut(s) 1216
TspRI CASTG 6 cut(s) 164, 259, 992, 1745, 2077, 2578
Van91I CCANNNNNTGG 2 cut(s) 987, 2577
VneI GTGCAC 1 cut(s) 55
VpaK11BI GGWCC 1 cut(s) 1496
XagI CCTNNNNNAGG 2 cut(s) 1876, 2598
XapI RAATTY 9 cut(s) 23, 320, 386, 580, 821, 965, 1765, 2193, 2697
XceI RCATGY 3 cut(s) 1067, 1929, 2486
XmiI GTMKAC 3 cut(s) 1307, 2412, 2605
XspI CTAG 2 cut(s) 588, 1428
Zsp2I ATGCAT 1 cut(s) 2488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.