Rmu_ssc0000388.1_g000063

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000388.1
OG0000420
Physical Location & Seq
Forward (+)
304578 .. 308054
3477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000388.1_g000063.1.cds

Sequence Viewer

Length: 1953 bp
atggagaccaatttaaaatccagggttagggctcttccaattttcccaaccactcctccacaaacccataaatccctactcactcccctcctcctcctcctcttcttcttcttcatcaatttcacccccacagcttcaaccccgaaccaaatccccaatcttgatcaactatactccaaacactgcaacgacgtcgttcccaaatcggagacgcaccccaagtggttcctcaccaccctctccatccaagacctcggattccacagcagttacttcaccggcggcgatcgccttttcaatcagagctccggcggccgcaaagctctcatcttccggcccaactacgtagctcgaaccctagcggatggaattttccatgtcaaaggaagtatggatcttcaatctcttctgggctattcgactcgccggaatctgaagttggttaagcccagaattccggtccggcggggcgtagtgaggtttaggcttgatgggtattattcagaatcgtcaaagaagctgtgtatgattgggaaagttatgtccatgtataatgcaggtaagtttgaggctagtgttgttcttaagcttaattttccgaaatggtctagtgtttatgatagtttgattactgggagtttagagagcgttgttattgctgagggcgatgatggtaagaattattttgatcccgttttgatgttgggtttgtctgtgaaacgtagttatgagtatacatttgttgggaaagataggctgagtagttttccgagtagtgtttatagaggagagagtatagctttggagaatttgaatgattcgagacgtgacttgtgtaggttgcttggtaaccgtcttgagagatatgaattggtgtatgggagtgagtgtggggctgtgaattgcaatcctcttggtggggatgttggatatgtacccggctcgttggttttttatgggactcggtgtacagaagggaggaaagtgcagatgttgttggggttttccaactccagtgtagatgagtacataagatttccatttgtgcctagcacgacgttcattgctgaaggggaatgggatgagaaggggaatcgtctatgcgcggtccccccacacatcctttttcacactgtcgtcaaagaggaatctccacttcctcgtcgaggacacgaagcgaagagagactacaaagagagattacggagcgaggctacggagggagattatggagagaggctacagagggaaattacagtgggagagagaggctacaaagggagactacggagggaggatactgaggaagactatgaagggaggttaaggagggagactacagagagaggtgacgacgagagttacagagcggcaccaagttacgaagccaagaggggtcttcgctttatcaagatcaagtcaacgacgaatagaagcttctcgattgtccccgtggaaggtgatgcacttaatgtgattaatcccctgaatgaaattggtatcaacctaagtgatattagtggggttcttgatcgaataagccttcaaaccttagcaaccgccgccgcatatattgaagccccgaatcccaggagtccagaactagcggcgccacccaagaaccagtcaggaaaacttcgaaccagcccccagaagaagcagaaaatctcctgcccagttcgcattcttgcagtccgccttcggccaccatattatgtcaccatcagtgccttgattccagattccgggaaccggaaaatttttcccggaactgaccttaaagttttcgaatcagccactaaaagcaattgcatcgttgaaccgccagagagaagaaaagaaaaaagaaaaaataaaagggaaaggaaaagaaggaagcccaagcccagcagcccaaaagaaaaaaaaaacagagaggtagcaggcctattgccacatcagctccccacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

650

Amino Acids

73.5

Weight (kDa)

9.66

Isoelectric Point (pI)

48.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 195
Acc36I ACCTGC 1 cut(s) 548
AccB1I GGYRCC 2 cut(s) 1372, 1609
AccBSI CCGCTC 1 cut(s) 1370
AccI GTMKAC 1 cut(s) 734
AccII CGCG 1 cut(s) 1106
AclWI GGATC 2 cut(s) 402, 683
AcoI YGGCCR 2 cut(s) 313, 1703
AcsI RAATTY 4 cut(s) 369, 453, 808, 1758
AcuI CTGAAG 2 cut(s) 455, 1089
AcyI GRCGYC 2 cut(s) 192, 1610
AfaI GTAC 3 cut(s) 936, 970, 1028
AfiI CCNNNNNNNGG 6 cut(s) 27, 917, 1166, 1457, 1745, 1752
AflII CTTAAG 1 cut(s) 584
AgsI TTSAA 7 cut(s) 138, 298, 401, 814, 1547, 1577, 1820
AjiI CACGTC 1 cut(s) 827
AjnI CCWGG 2 cut(s) 20, 1589
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
AluBI AGCT 9 cut(s) 134, 306, 323, 350, 520, 589, 800, 1437, 1942
AluI AGCT 9 cut(s) 134, 306, 323, 350, 520, 589, 800, 1437, 1942
Alw21I GWGCWC 1 cut(s) 308
Alw26I GTCTC 5 cut(s) 203, 817, 1179, 1276, 1328
AlwI GGATC 2 cut(s) 402, 683
AoxI GGCC 4 cut(s) 313, 335, 1703, 1924
ApeKI GCWGC 1 cut(s) 1890
ApoI RAATTY 4 cut(s) 369, 453, 808, 1758
AseI ATTAAT 1 cut(s) 1479
AsiSI GCGATCGC 1 cut(s) 289
AspLEI GCGC 2 cut(s) 1106, 1612
AspS9I GGNCC 3 cut(s) 336, 460, 1108
AsuC2I CCSGG 3 cut(s) 939, 1747, 1767
AsuHPI GGTGA 6 cut(s) 115, 223, 268, 1361, 1472, 1711
AsuII TTCGAA 2 cut(s) 1639, 1788
AvaII GGWCC 2 cut(s) 460, 1108
BanI GGYRCC 2 cut(s) 1372, 1609
BanII GRGCYC 2 cut(s) 34, 308
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
BbsI GAAGAC 2 cut(s) 1314, 1391
Bbv12I GWGCWC 1 cut(s) 308
BbvCI CCTCAGC 1 cut(s) 660
BbvI GCAGC 1 cut(s) 1902
BccI CCATC 5 cut(s) 251, 359, 485, 665, 1730
BcgI CGANNNNNNTGC 4 cut(s) 175, 209, 1795, 1829
BciT130I CCWGG 2 cut(s) 22, 1591
BciVI GTATCC 1 cut(s) 1291
BclI TGATCA 1 cut(s) 163
BcnI CCSGG 3 cut(s) 939, 1747, 1767
BcoDI GTCTC 5 cut(s) 203, 817, 1179, 1276, 1328
BfaI CTAG 5 cut(s) 359, 573, 609, 1050, 1604
BfmI CTRYAG 2 cut(s) 1241, 1338
BfoI RGCGCY 1 cut(s) 1613
BfrI CTTAAG 1 cut(s) 584
BfuAI ACCTGC 1 cut(s) 548
BfuI GTATCC 1 cut(s) 1291
BisI GCNGC 8 cut(s) 283, 313, 316, 1371, 1563, 1566, 1608, 1891
BlsI GCNGC 8 cut(s) 284, 314, 317, 1372, 1564, 1567, 1609, 1892
Bme1390I CCNGG 5 cut(s) 22, 939, 1591, 1747, 1767
Bme18I GGWCC 2 cut(s) 460, 1108
BmgBI CACGTC 1 cut(s) 827
BmgT120I GGNCC 3 cut(s) 336, 460, 1108
BmiI GGNNCC 5 cut(s) 227, 1110, 1374, 1611, 1751
BmrFI CCNGG 5 cut(s) 22, 939, 1591, 1747, 1767
BmrI ACTGGG 2 cut(s) 642, 1670
BmsI GCATC 2 cut(s) 1453, 1821
BmuI ACTGGG 2 cut(s) 642, 1670
BpiI GAAGAC 2 cut(s) 1314, 1391
BpmI CTGGAG 1 cut(s) 997
Bpu10I CCTNAGC 2 cut(s) 660, 1552
Bpu14I TTCGAA 2 cut(s) 1639, 1788
BpuEI CTTGAG 1 cut(s) 878
BpuMI CCSGG 3 cut(s) 939, 1747, 1767
BsaAI YACGTR 1 cut(s) 346
BsaHI GRCGYC 2 cut(s) 192, 1610
BsaJI CCNNGG 4 cut(s) 21, 253, 1452, 1589
BsaWI WCCGGW 2 cut(s) 457, 1752
BsaXI ACNNNNNCTCC 5 cut(s) 40, 70, 874, 904, 1926
Bsc4I CCNNNNNNNGG 6 cut(s) 27, 917, 1166, 1457, 1745, 1752
Bse118I RCCGGY 1 cut(s) 278
Bse1I ACTGG 4 cut(s) 637, 1014, 1624, 1676
Bse3DI GCAATG 1 cut(s) 1062
BseBI CCWGG 2 cut(s) 22, 1591
BseDI CCNNGG 4 cut(s) 21, 253, 1452, 1589
BseGI GGATG 5 cut(s) 243, 370, 928, 1087, 1119
BseLI CCNNNNNNNGG 6 cut(s) 27, 917, 1166, 1457, 1745, 1752
BseMI GCAATG 1 cut(s) 1062
BseMII CTCAG 3 cut(s) 651, 749, 1293
BseNI ACTGG 4 cut(s) 637, 1014, 1624, 1676
BseRI GAGGAG 6 cut(s) 45, 80, 83, 86, 89, 801
BseX3I CGGCCG 1 cut(s) 313
BseXI GCAGC 1 cut(s) 1902
BseYI CCCAGC 1 cut(s) 1886
BsgI GTGCAG 1 cut(s) 1007
Bsh1236I CGCG 1 cut(s) 1106
Bsh1285I CGRYCG 2 cut(s) 289, 316
BshFI GGCC 4 cut(s) 315, 337, 1705, 1926
BshNI GGYRCC 2 cut(s) 1372, 1609
BsiEI CGRYCG 2 cut(s) 289, 316
BsiHKAI GWGCWC 1 cut(s) 308
BslFI GGGAC 3 cut(s) 973, 1094, 1433
BslI CCNNNNNNNGG 6 cut(s) 27, 917, 1166, 1457, 1745, 1752
BsmAI GTCTC 5 cut(s) 203, 817, 1179, 1276, 1328
BsmBI CGTCTC 2 cut(s) 203, 817
BsmFI GGGAC 3 cut(s) 973, 1094, 1433
BsmI GAATGC 1 cut(s) 1683
BsnI GGCC 4 cut(s) 315, 337, 1705, 1926
Bsp119I TTCGAA 2 cut(s) 1639, 1788
Bsp1286I GDGCHC 2 cut(s) 34, 308
Bsp1407I TGTACA 1 cut(s) 968
Bsp143I GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
BspANI GGCC 4 cut(s) 315, 337, 1705, 1926
BspCNI CTCAG 3 cut(s) 652, 750, 1294
BspFNI CGCG 1 cut(s) 1106
BspLI GGNNCC 5 cut(s) 227, 1110, 1374, 1611, 1751
BspMI ACCTGC 1 cut(s) 548
BspPI GGATC 2 cut(s) 402, 683
BspQI GCTCTTC 1 cut(s) 39
BspT104I TTCGAA 2 cut(s) 1639, 1788
BspT107I GGYRCC 2 cut(s) 1372, 1609
BspTI CTTAAG 1 cut(s) 584
BsrBI CCGCTC 1 cut(s) 1370
BsrDI GCAATG 1 cut(s) 1062
BsrFI RCCGGY 1 cut(s) 278
BsrGI TGTACA 1 cut(s) 968
BsrI ACTGG 4 cut(s) 637, 1014, 1624, 1676
BssAI RCCGGY 1 cut(s) 278
BssECI CCNNGG 4 cut(s) 21, 253, 1452, 1589
BssMI GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
BssNAI GTATAC 1 cut(s) 735
BssNI GRCGYC 2 cut(s) 192, 1610
Bst1107I GTATAC 1 cut(s) 735
Bst2UI CCWGG 2 cut(s) 22, 1591
Bst4CI ACNGT 3 cut(s) 854, 1135, 1258
Bst6I CTCTTC 4 cut(s) 39, 107, 411, 1175
BstACI GRCGYC 2 cut(s) 192, 1610
BstAFI CTTAAG 1 cut(s) 584
BstAUI TGTACA 1 cut(s) 968
BstBAI YACGTR 1 cut(s) 346
BstBI TTCGAA 2 cut(s) 1639, 1788
BstC8I GCNNGC 1 cut(s) 1924
BstDEI CTNAG 6 cut(s) 660, 758, 1302, 1508, 1552, 1950
BstDSI CCRYGG 1 cut(s) 1452
BstEII GGTNACC 1 cut(s) 848
BstENI CCTNNNNNAGG 1 cut(s) 1164
BstF5I GGATG 5 cut(s) 243, 370, 928, 1087, 1119
BstFNI CGCG 1 cut(s) 1106
BstH2I RGCGCY 1 cut(s) 1613
BstHHI GCGC 2 cut(s) 1106, 1612
BstKTI GATC 6 cut(s) 166, 289, 397, 691, 1416, 1534
BstMAI GTCTC 5 cut(s) 203, 817, 1179, 1276, 1328
BstMBI GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
BstMCI CGRYCG 2 cut(s) 289, 316
BstMWI GCNNNNNNNGC 5 cut(s) 288, 312, 1562, 1680, 1939
BstNI CCWGG 2 cut(s) 22, 1591
BstPI GGTNACC 1 cut(s) 848
BstSCI CCNGG 5 cut(s) 20, 937, 1589, 1745, 1765
BstSFI CTRYAG 2 cut(s) 1241, 1338
BstSNI TACGTA 1 cut(s) 346
BstUI CGCG 1 cut(s) 1106
BstV1I GCAGC 1 cut(s) 1902
BstV2I GAAGAC 2 cut(s) 1314, 1391
BstX2I RGATCY 1 cut(s) 394
BstYI RGATCY 1 cut(s) 394
BstZ17I GTATAC 1 cut(s) 735
BstZI CGGCCG 1 cut(s) 313
BsuI GTATCC 1 cut(s) 1291
BsuRI GGCC 4 cut(s) 315, 337, 1705, 1926
BtgI CCRYGG 1 cut(s) 1452
BtgZI GCGATG 1 cut(s) 681
BtrI CACGTC 1 cut(s) 827
BtsCI GGATG 5 cut(s) 243, 370, 928, 1087, 1119
BtsI GCAGTG 1 cut(s) 181
BtsIMutI CAGTG 5 cut(s) 181, 1021, 1131, 1263, 1732
BveI ACCTGC 1 cut(s) 548
Cac8I GCNNGC 1 cut(s) 1924
CciNI GCGGCCGC 1 cut(s) 313
CfoI GCGC 2 cut(s) 1106, 1612
Cfr10I RCCGGY 1 cut(s) 278
Cfr13I GGNCC 3 cut(s) 336, 460, 1108
CpoI CGGWCCG 1 cut(s) 460
CseI GACGC 1 cut(s) 220
Csp6I GTAC 3 cut(s) 935, 969, 1027
CspI CGGWCCG 1 cut(s) 460
CviAII CATG 2 cut(s) 377, 547
CviQI GTAC 3 cut(s) 935, 969, 1027
DdeI CTNAG 6 cut(s) 660, 758, 1302, 1508, 1552, 1950
DinI GGCGCC 1 cut(s) 1611
DpnI GATC 6 cut(s) 165, 288, 396, 690, 1415, 1533
DpnII GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
DraI TTTAAA 1 cut(s) 15
EaeI YGGCCR 2 cut(s) 313, 1703
EagI CGGCCG 1 cut(s) 313
Eam1104I CTCTTC 4 cut(s) 39, 107, 411, 1175
EarI CTCTTC 4 cut(s) 39, 107, 411, 1175
EciI GGCGGA 1 cut(s) 1685
Ecl136II GAGCTC 1 cut(s) 306
EclXI CGGCCG 1 cut(s) 313
Eco105I TACGTA 1 cut(s) 346
Eco147I AGGCCT 1 cut(s) 1926
Eco24I GRGCYC 2 cut(s) 34, 308
Eco47I GGWCC 2 cut(s) 460, 1108
Eco52I CGGCCG 1 cut(s) 313
Eco53kI GAGCTC 1 cut(s) 306
Eco57I CTGAAG 2 cut(s) 455, 1089
Eco91I GGTNACC 1 cut(s) 848
EcoICRI GAGCTC 1 cut(s) 306
EcoNI CCTNNNNNAGG 1 cut(s) 1164
EcoO65I GGTNACC 1 cut(s) 848
EcoRI GAATTC 1 cut(s) 453
EcoRII CCWGG 2 cut(s) 20, 1589
EcoT38I GRGCYC 2 cut(s) 34, 308
EgeI GGCGCC 1 cut(s) 1611
EheI GGCGCC 1 cut(s) 1611
Esp3I CGTCTC 2 cut(s) 203, 817
FaeI CATG 2 cut(s) 380, 550
FaqI GGGAC 3 cut(s) 973, 1094, 1433
FatI CATG 2 cut(s) 376, 546
FauI CCCGC 1 cut(s) 459
FbaI TGATCA 1 cut(s) 163
FblI GTMKAC 1 cut(s) 734
Fnu4HI GCNGC 8 cut(s) 283, 313, 316, 1371, 1563, 1566, 1608, 1891
FokI GGATG 5 cut(s) 230, 377, 935, 1094, 1106
FriOI GRGCYC 2 cut(s) 34, 308
Fsp4HI GCNGC 8 cut(s) 283, 313, 316, 1371, 1563, 1566, 1608, 1891
FspBI CTAG 5 cut(s) 359, 573, 609, 1050, 1604
GlaI GCGC 2 cut(s) 1105, 1611
GluI GCNGC 8 cut(s) 283, 313, 316, 1371, 1563, 1566, 1608, 1891
GsaI CCCAGC 1 cut(s) 1890
GsuI CTGGAG 1 cut(s) 997
HaeII RGCGCY 1 cut(s) 1613
HaeIII GGCC 4 cut(s) 315, 337, 1705, 1926
HgaI GACGC 1 cut(s) 220
HhaI GCGC 2 cut(s) 1106, 1612
Hin1I GRCGYC 2 cut(s) 192, 1610
Hin1II CATG 2 cut(s) 380, 550
Hin6I GCGC 2 cut(s) 1104, 1610
HinP1I GCGC 2 cut(s) 1104, 1610
HincII GTYRAC 1 cut(s) 1422
HindII GTYRAC 1 cut(s) 1422
HindIII AAGCTT 2 cut(s) 587, 1435
HphI GGTGA 6 cut(s) 115, 223, 268, 1361, 1472, 1711
Hpy166II GTNNAC 3 cut(s) 735, 969, 1422
Hpy188I TCNGA 7 cut(s) 208, 257, 303, 435, 505, 600, 771
Hpy188III TCNNGA 9 cut(s) 161, 822, 857, 1411, 1441, 1529, 1598, 1629, 1739
Hpy8I GTNNAC 3 cut(s) 735, 969, 1422
Hpy99I CGWCG 6 cut(s) 194, 197, 1060, 1167, 1358, 1429
HpyAV CCTTC 8 cut(s) 968, 1064, 1081, 1310, 1451, 1553, 1709, 1866
HpyCH4III ACNGT 3 cut(s) 854, 1135, 1258
HpyCH4IV ACGT 5 cut(s) 192, 345, 721, 826, 1058
HpyCH4V TGCA 7 cut(s) 186, 557, 906, 988, 1466, 1691, 1812
HpyF10VI GCNNNNNNNGC 5 cut(s) 288, 312, 1562, 1680, 1939
HpyF3I CTNAG 6 cut(s) 660, 758, 1302, 1508, 1552, 1950
HpySE526I ACGT 5 cut(s) 192, 345, 721, 826, 1058
Hsp92I GRCGYC 2 cut(s) 192, 1610
Hsp92II CATG 2 cut(s) 380, 550
HspAI GCGC 2 cut(s) 1104, 1610
KasI GGCGCC 1 cut(s) 1609
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
LguI GCTCTTC 1 cut(s) 39
LmnI GCTCC 3 cut(s) 311, 1206, 1947
Lsp1109I GCAGC 1 cut(s) 1902
LweI GCATC 2 cut(s) 1453, 1821
MaeI CTAG 5 cut(s) 359, 573, 609, 1050, 1604
MaeII ACGT 5 cut(s) 192, 345, 721, 826, 1058
MaeIII GTNAC 7 cut(s) 269, 827, 848, 1349, 1361, 1379, 1717
MalI GATC 6 cut(s) 165, 288, 396, 690, 1415, 1533
MbiI CCGCTC 1 cut(s) 1370
MboI GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
MfeI CAATTG 1 cut(s) 1807
MflI RGATCY 1 cut(s) 394
MhlI GDGCHC 2 cut(s) 34, 308
Mly113I GGCGCC 1 cut(s) 1610
MlyI GAGTC 3 cut(s) 415, 955, 1603
MmeI TCCRAC 2 cut(s) 907, 1032
MseI TTAA 8 cut(s) 14, 444, 585, 591, 1325, 1470, 1479, 1779
MspCI CTTAAG 1 cut(s) 584
MspR9I CCNGG 5 cut(s) 22, 939, 1591, 1747, 1767
MunI CAATTG 1 cut(s) 1807
Mva1269I GAATGC 1 cut(s) 1683
MvaI CCWGG 2 cut(s) 22, 1591
MvnI CGCG 1 cut(s) 1106
MwoI GCNNNNNNNGC 5 cut(s) 288, 312, 1562, 1680, 1939
NarI GGCGCC 1 cut(s) 1610
NciI CCSGG 3 cut(s) 939, 1747, 1767
NdeII GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
NlaIII CATG 2 cut(s) 380, 550
NlaIV GGNNCC 5 cut(s) 227, 1110, 1374, 1611, 1751
NmuCI GTSAC 3 cut(s) 827, 1349, 1717
NotI GCGGCCGC 1 cut(s) 313
NspV TTCGAA 2 cut(s) 1639, 1788
PceI AGGCCT 1 cut(s) 1926
PciSI GCTCTTC 1 cut(s) 39
PctI GAATGC 1 cut(s) 1683
PfoI TCCNGGA 2 cut(s) 1745, 1765
PkrI GCNGC 8 cut(s) 284, 314, 317, 1372, 1564, 1567, 1609, 1892
Ple19I CGATCG 1 cut(s) 289
PleI GAGTC 3 cut(s) 415, 955, 1602
PluTI GGCGCC 1 cut(s) 1613
PpsI GAGTC 3 cut(s) 415, 955, 1602
Ppu21I YACGTR 1 cut(s) 346
PshBI ATTAAT 1 cut(s) 1479
Psp124BI GAGCTC 1 cut(s) 308
Psp6I CCWGG 2 cut(s) 20, 1589
PspEI GGTNACC 1 cut(s) 848
PspFI CCCAGC 1 cut(s) 1886
PspGI CCWGG 2 cut(s) 20, 1589
PspN4I GGNNCC 5 cut(s) 227, 1110, 1374, 1611, 1751
PspPI GGNCC 3 cut(s) 336, 460, 1108
PsuI RGATCY 1 cut(s) 394
PvuI CGATCG 1 cut(s) 289
RgaI GCGATCGC 1 cut(s) 289
RsaI GTAC 3 cut(s) 936, 970, 1028
RsaNI GTAC 3 cut(s) 935, 969, 1027
Rsr2I CGGWCCG 1 cut(s) 460
RsrII CGGWCCG 1 cut(s) 460
SacI GAGCTC 1 cut(s) 308
SapI GCTCTTC 1 cut(s) 39
SaqAI TTAA 8 cut(s) 14, 444, 585, 591, 1325, 1470, 1479, 1779
SatI GCNGC 8 cut(s) 283, 313, 316, 1371, 1563, 1566, 1608, 1891
Sau3AI GATC 6 cut(s) 163, 286, 394, 688, 1413, 1531
Sau96I GGNCC 3 cut(s) 336, 460, 1108
SchI GAGTC 3 cut(s) 415, 955, 1603
ScrFI CCNGG 5 cut(s) 22, 939, 1591, 1747, 1767
SduI GDGCHC 2 cut(s) 34, 308
SfaAI GCGATCGC 1 cut(s) 289
SfaNI GCATC 2 cut(s) 1453, 1821
SfcI CTRYAG 2 cut(s) 1241, 1338
SfoI GGCGCC 1 cut(s) 1611
SfuI TTCGAA 2 cut(s) 1639, 1788
SgfI GCGATCGC 1 cut(s) 289
SgrAI CRCCGGYG 1 cut(s) 278
SinI GGWCC 2 cut(s) 460, 1108
SmlI CTYRAG 2 cut(s) 584, 857
SmoI CTYRAG 2 cut(s) 584, 857
SnaBI TACGTA 1 cut(s) 346
SseBI AGGCCT 1 cut(s) 1926
SspDI GGCGCC 1 cut(s) 1609
SspMI CTAG 5 cut(s) 359, 573, 609, 1050, 1604
SstI GAGCTC 1 cut(s) 308
StuI AGGCCT 1 cut(s) 1926
StyD4I CCNGG 5 cut(s) 20, 937, 1589, 1745, 1765
TaaI ACNGT 3 cut(s) 854, 1135, 1258
TaiI ACGT 5 cut(s) 195, 348, 724, 829, 1061
TaqI TCGA 8 cut(s) 352, 419, 821, 1165, 1442, 1534, 1639, 1788
TatI WGTACW 2 cut(s) 968, 1026
TauI GCSGC 7 cut(s) 285, 315, 318, 1373, 1565, 1568, 1610
Tru1I TTAA 8 cut(s) 14, 444, 585, 591, 1325, 1470, 1479, 1779
Tru9I TTAA 8 cut(s) 14, 444, 585, 591, 1325, 1470, 1479, 1779
TscAI CASTG 5 cut(s) 188, 1021, 1138, 1263, 1732
TseFI GTSAC 3 cut(s) 827, 1349, 1717
TseI GCWGC 1 cut(s) 1890
Tsp45I GTSAC 3 cut(s) 827, 1349, 1717
TspDTI ATGAA 5 cut(s) 103, 882, 1051, 1329, 1506
TspGWI ACGGA 3 cut(s) 1219, 1232, 1303
TspRI CASTG 5 cut(s) 188, 1021, 1138, 1263, 1732
Vha464I CTTAAG 1 cut(s) 584
VpaK11BI GGWCC 2 cut(s) 460, 1108
VspI ATTAAT 1 cut(s) 1479
XagI CCTNNNNNAGG 1 cut(s) 1164
XapI RAATTY 4 cut(s) 369, 453, 808, 1758
XmiI GTMKAC 1 cut(s) 734
XspI CTAG 5 cut(s) 359, 573, 609, 1050, 1604
ZraI GACGTC 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.