RchiOBHm_Chr5g0008391

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000420
Physical Location & Seq
Reverse (-)
5347372 .. 5349662
2291 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28937

Sequence Viewer

Length: 2169 bp
ATGGTTGATTTGAATTATTTTGAACTCATTTCGATACTGGGGTTATCTCGGAAATCTGGTTATCAGCCCACATTCATTGGGAATGGTCGTCTGAATGGCTCTTTGGTTGGTTATGATAGAGGGGAGAGTTTAGGTATGGATAGTTTAGCTCTAGAGAAATTTGGTCGTTCGAGCCGCAGTGTATGTAGCGCTGTTGGTGGTTTTGGTTTTACAGGAGAAAGATATGAATTGGAATATGAGAGTGATTTTGGCAATCCTCTCGGTGGAGATGTTGGATATGTACCTAAGTTCTTTGTTTTTCGTAGGACTCGGTGTGAAGATGGGAAGATGCAGATGTTGTTGGGGTTTCCCAACTCGAGTTTTCATGGACGGGGTAGTACTTTTCCCTTTGAACCTAGGACAAGTTTGATTGCTGAAGGGGAATGGATTGAGAAGGAGAATCGTATGTTAGCTGTTGCGTGCCGGATTTTGAATTTTACGGAGTCATTGACTAATGCTGTTGTGGGAGATTGTTCGACTAGACTCAGCTTTAGGTTACCTGCACGGGTGTCTTTAAGAAATAGGTCTAGTATTGTGGGGCAAATTTGGAGCAACAGAGCGGTGAATGACTCTAATTACTTTGGTAAAATTGGGTTTCACAGAGTGTCGGAGCAGTTGATGAAATTCTTACCAGGTTACAAAAACGAATTCACTGAGTATGACACGGTGAGGAAAACTTGTGATGAAAAGAAGACCAATGAAGGAAAAAGAAAGAAATACCCTGATGAGCATTTGTTGGAAATGACACTTCAAATGGCAGTGAGAAACAGTACAGGGCAAACTGAATGGGTTCATGTATCCCCATTGTTTGTGGATGGCGATCGAAGTCATGCTGGGCTTTGGGATAAACTGCTGAAGAAAAGCCATAGTAGTGTGGTGAATATGAGCTATGATTTAACCTTCAGTTTCATACATGACTATAATTTCTTTGATAATGGTACACCTCAGTTTCAACAAAAATATATGCTGAAGGAATATATGATAGGGATAATGGTAATCTATGCATGTAGGCATGTATTGTCAAAAGATCAAGAATTGATGGAAAAGGATACGCTAGACTGTGCTATCAAAATTAATCTCCAGTTTTCTCCATTGGATGCCAAGAATCGTAGAATTGTCAATGGGACTATTGAAAGCACAAGGAGAAAGTCAGACCCTCTTTATTTTGAGCCTATGGAGTTATTATACTCAGGTTCCATTACCGAAAGGCAAGCTGCAAAGTCCATTTCAAGAATGGACTTGGAGAATGTTATGGTTCTAATTTCCAACTTCTTTGCATGTGTCTTTGTTGGCTGCCAGCTCTATTATGTGAAGAAACACCCAGATGTACTCCCGTTCATCTCCATTGTGATGCTTGTTGTTCTCATTCTGGGGTACGCGATTCCTCTTCTGTCCAACTTTGAAGCAATGTTTATGCGAAACCGCAACAACTGGCAGGATAAGTTTCTTGGCACTGGTGAATGGCACAAGGTGAATGAAGTAATTGTCAGCGTGATGATGTTGGTAGTTTTCCTGCTGCAGCTGCGGCTTCTCCAGCTGACCTGGTGCTCGAGACAAGGTAATGGAAGCCAGAAGCGCTTGAGGGAATCCGAGAAAAAGGTTCTTTATACAACTTTACCACTATACATAGCTGGTGCACTGATTTCTTGTTTCGACCACCAGTGGATCCATACTCACCACACCTCATACATACCACTACACGTCCATTTGCCTCTTCATATTGTTCGCCAGCGACACAATCTCTGGGATGACCTCAAGCCTTACAGTGGCTTTGCCCTGGACGGTTTCCTGTTCCCACAGATACTGTTCAACTTGTTCTTCAATTCAGGAGAAAAGGCTCTCACCTGTGCATTCTATTTCGGAACTACCATAATCCGTCTGTTGCCTCATGCATATGATCTTTACAGGGCTCATACATTTCCTCGGCTTCCTGCTCTCTATTTCTTTATGCAAACCCGGCATCGGATTTTTTCTCCACTGCCTGGAACATCATCATTCCTTGCTGTGGTCTGTTGTTTGTCACCATTGTTTTCTTGCAGCAGAGGCTTGGTGGCCGTTGCATTCTTCCCAATAAATTTAGACAAGACCTCTTGTGTATATGAGAAAGTCTCTGTCATCAGCAATGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

722

Amino Acids

82.74

Weight (kDa)

8.91

Isoelectric Point (pI)

38.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 99 - 210 3.3e-23 DUF2921 lipocalin-like domain
DUF2921_N PF25333 239 - 405 2.6e-16 DUF2921 lipocalin-like domain
DUF2921 PF11145 418 - 656 3.2e-49 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 547
AccB7I CCANNNNNTGG 1 cut(s) 2021
AccBSI CCGCTC 1 cut(s) 599
AccII CGCG 1 cut(s) 1418
AciI CCGC 4 cut(s) 175, 599, 1462, 1564
AclWI GGATC 2 cut(s) 1699, 1712
AcoI YGGCCR 1 cut(s) 2091
AcsI RAATTY 6 cut(s) 158, 472, 582, 662, 686, 2113
AcuI CTGAAG 4 cut(s) 435, 914, 925, 1028
AdeI CACNNNGTG 2 cut(s) 643, 1510
AfaI GTAC 6 cut(s) 282, 379, 811, 979, 1368, 1415
AfeI AGCGCT 2 cut(s) 190, 1616
AfiI CCNNNNNNNGG 5 cut(s) 263, 1805, 2001, 2021, 2044
AflIII ACRYGT 1 cut(s) 1738
AjiI CACGTC 1 cut(s) 1741
AjnI CCWGG 4 cut(s) 670, 1580, 1815, 2020
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
AluBI AGCT 9 cut(s) 149, 452, 528, 927, 1253, 1339, 1561, 1576, 1670
AluI AGCT 9 cut(s) 149, 452, 528, 927, 1253, 1339, 1561, 1576, 1670
Alw21I GWGCWC 2 cut(s) 1589, 1678
Alw26I GTCTC 2 cut(s) 1585, 2152
Alw44I GTGCAC 1 cut(s) 1674
AlwI GGATC 2 cut(s) 1699, 1712
AlwNI CAGNNNCTG 1 cut(s) 1843
Ama87I CYCGRG 2 cut(s) 355, 1588
Aor51HI AGCGCT 2 cut(s) 190, 1616
AoxI GGCC 1 cut(s) 2091
ApaLI GTGCAC 1 cut(s) 1674
ApeKI GCWGC 6 cut(s) 1253, 1332, 1555, 1558, 1561, 2076
ApoI RAATTY 6 cut(s) 158, 472, 582, 662, 686, 2113
AseI ATTAAT 1 cut(s) 1113
Asp700I GAANNNNTTC 1 cut(s) 828
AspA2I CCTAGG 1 cut(s) 395
AspLEI GCGC 2 cut(s) 191, 1617
AsuC2I CCSGG 1 cut(s) 1996
AsuHPI GGTGA 8 cut(s) 613, 718, 928, 1508, 1522, 1706, 1873, 2052
AvaI CYCGRG 2 cut(s) 355, 1588
AvrII CCTAGG 1 cut(s) 395
BaeGI GKGCMC 1 cut(s) 1678
BaeI ACNNNNGTAYC 2 cut(s) 26, 59
BamHI GGATCC 1 cut(s) 1704
BanII GRGCYC 1 cut(s) 1951
BbsI GAAGAC 1 cut(s) 737
Bbv12I GWGCWC 2 cut(s) 1589, 1678
BbvI GCAGC 6 cut(s) 1240, 1319, 1542, 1548, 1570, 2088
BccI CCATC 3 cut(s) 314, 848, 1072
BceAI ACGGC 1 cut(s) 2078
BcgI CGANNNNNNTGC 2 cut(s) 241, 275
BciT130I CCWGG 4 cut(s) 672, 1582, 1817, 2022
BciVI GTATCC 2 cut(s) 847, 1081
BcnI CCSGG 1 cut(s) 1996
BcoDI GTCTC 2 cut(s) 1585, 2152
BfaI CTAG 5 cut(s) 152, 396, 519, 567, 1094
BfmI CTRYAG 1 cut(s) 1556
BfoI RGCGCY 2 cut(s) 192, 1618
BfuAI ACCTGC 1 cut(s) 547
BfuI GTATCC 2 cut(s) 847, 1081
BisI GCNGC 8 cut(s) 175, 1254, 1333, 1556, 1559, 1562, 1565, 2077
BlnI CCTAGG 1 cut(s) 395
BlsI GCNGC 8 cut(s) 176, 1255, 1334, 1557, 1560, 1563, 1566, 2078
BmcAI AGTACT 1 cut(s) 379
Bme1390I CCNGG 5 cut(s) 672, 1582, 1817, 1996, 2022
BmeT110I CYCGRG 2 cut(s) 355, 1588
BmgBI CACGTC 1 cut(s) 1741
BmiI GGNNCC 2 cut(s) 1234, 1706
BmrFI CCNGG 5 cut(s) 672, 1582, 1817, 1996, 2022
BmrI ACTGGG 1 cut(s) 47
BmsI GCATC 4 cut(s) 318, 1126, 1380, 2008
BmuI ACTGGG 1 cut(s) 47
BpiI GAAGAC 1 cut(s) 737
BplI GAGNNNNNCTC 2 cut(s) 2132, 2164
BpmI CTGGAG 2 cut(s) 1103, 1556
BpuEI CTTGAG 2 cut(s) 1639, 1778
BpuMI CCSGG 1 cut(s) 1996
BsaBI GATNNNNATC 1 cut(s) 858
BsaJI CCNNGG 3 cut(s) 395, 1815, 1961
Bsc4I CCNNNNNNNGG 5 cut(s) 263, 1805, 2001, 2021, 2044
Bse1I ACTGG 5 cut(s) 42, 1120, 1475, 1498, 1699
Bse3DI GCAATG 2 cut(s) 1452, 2167
Bse8I GATNNNNATC 1 cut(s) 858
BseBI CCWGG 4 cut(s) 672, 1582, 1817, 2022
BseDI CCNNGG 3 cut(s) 395, 1815, 1961
BseGI GGATG 3 cut(s) 859, 1141, 1792
BseJI GATNNNNATC 1 cut(s) 858
BseLI CCNNNNNNNGG 5 cut(s) 263, 1805, 2001, 2021, 2044
BseMI GCAATG 2 cut(s) 1452, 2167
BseMII CTCAG 4 cut(s) 538, 684, 998, 1242
BseNI ACTGG 5 cut(s) 42, 1120, 1475, 1498, 1699
BseSI GKGCMC 1 cut(s) 1678
BseXI GCAGC 6 cut(s) 1240, 1319, 1542, 1548, 1570, 2088
BseYI CCCAGC 1 cut(s) 872
BsgI GTGCAG 1 cut(s) 525
Bsh1236I CGCG 1 cut(s) 1418
Bsh1285I CGRYCG 1 cut(s) 862
BshFI GGCC 1 cut(s) 2093
BsiEI CGRYCG 1 cut(s) 862
BsiHKAI GWGCWC 2 cut(s) 1589, 1678
BsiHKCI CYCGRG 2 cut(s) 355, 1588
BsiSI CCGG 2 cut(s) 463, 1996
BslFI GGGAC 1 cut(s) 1177
BslI CCNNNNNNNGG 5 cut(s) 263, 1805, 2001, 2021, 2044
BsmAI GTCTC 2 cut(s) 1585, 2152
BsmFI GGGAC 1 cut(s) 1177
BsmI GAATGC 2 cut(s) 1889, 2099
BsnI GGCC 1 cut(s) 2093
BsoBI CYCGRG 2 cut(s) 355, 1588
Bsp1286I GDGCHC 3 cut(s) 1589, 1678, 1951
Bsp143I GATC 4 cut(s) 859, 1066, 1704, 1936
BspACI CCGC 4 cut(s) 175, 599, 1462, 1564
BspANI GGCC 1 cut(s) 2093
BspCNI CTCAG 4 cut(s) 537, 685, 997, 1241
BspFNI CGCG 1 cut(s) 1418
BspLI GGNNCC 2 cut(s) 1234, 1706
BspMAI CTGCAG 1 cut(s) 1560
BspMI ACCTGC 1 cut(s) 547
BspPI GGATC 2 cut(s) 1699, 1712
BsrBI CCGCTC 1 cut(s) 599
BsrDI GCAATG 2 cut(s) 1452, 2167
BsrI ACTGG 5 cut(s) 42, 1120, 1475, 1498, 1699
BssECI CCNNGG 3 cut(s) 395, 1815, 1961
BssMI GATC 4 cut(s) 859, 1066, 1704, 1936
BssT1I CCWWGG 1 cut(s) 395
Bst2UI CCWGG 4 cut(s) 672, 1582, 1817, 2022
Bst4CI ACNGT 6 cut(s) 706, 809, 1100, 1805, 1823, 1845
Bst6I CTCTTC 2 cut(s) 1431, 1758
BstC8I GCNNGC 4 cut(s) 460, 1251, 1337, 1769
BstDEI CTNAG 5 cut(s) 285, 524, 693, 984, 1228
BstEII GGTNACC 1 cut(s) 534
BstF5I GGATG 3 cut(s) 859, 1141, 1792
BstFNI CGCG 1 cut(s) 1418
BstH2I RGCGCY 2 cut(s) 192, 1618
BstHHI GCGC 2 cut(s) 191, 1617
BstKTI GATC 4 cut(s) 862, 1069, 1707, 1939
BstMAI GTCTC 2 cut(s) 1585, 2152
BstMBI GATC 4 cut(s) 859, 1066, 1704, 1936
BstMCI CGRYCG 1 cut(s) 862
BstMWI GCNNNNNNNGC 6 cut(s) 1561, 1564, 1573, 1614, 1996, 2082
BstNI CCWGG 4 cut(s) 672, 1582, 1817, 2022
BstNSI RCATGY 3 cut(s) 1047, 1055, 1320
BstPI GGTNACC 1 cut(s) 534
BstSCI CCNGG 5 cut(s) 670, 1580, 1815, 1994, 2020
BstSFI CTRYAG 1 cut(s) 1556
BstSLI GKGCMC 1 cut(s) 1678
BstUI CGCG 1 cut(s) 1418
BstV1I GCAGC 6 cut(s) 1240, 1319, 1542, 1548, 1570, 2088
BstV2I GAAGAC 1 cut(s) 737
BstX2I RGATCY 1 cut(s) 1704
BstYI RGATCY 1 cut(s) 1704
BsuI GTATCC 2 cut(s) 847, 1081
BsuRI GGCC 1 cut(s) 2093
BtrI CACGTC 1 cut(s) 1741
BtsCI GGATG 3 cut(s) 859, 1141, 1792
BtsI GCAGTG 3 cut(s) 184, 804, 2015
BtsIMutI CAGTG 8 cut(s) 184, 690, 804, 1491, 1676, 1706, 1810, 2015
BveI ACCTGC 1 cut(s) 547
Cac8I GCNNGC 4 cut(s) 460, 1251, 1337, 1769
CaiI CAGNNNCTG 1 cut(s) 1843
CfoI GCGC 2 cut(s) 191, 1617
CsiI ACCWGGT 2 cut(s) 670, 1580
Csp6I GTAC 6 cut(s) 281, 378, 810, 978, 1367, 1414
CspCI CAANNNNNGTGG 2 cut(s) 58, 93
CviAII CATG 8 cut(s) 365, 833, 869, 953, 1044, 1052, 1317, 1928
CviQI GTAC 6 cut(s) 281, 378, 810, 978, 1367, 1414
DdeI CTNAG 5 cut(s) 285, 524, 693, 984, 1228
DpnI GATC 4 cut(s) 861, 1068, 1706, 1938
DpnII GATC 4 cut(s) 859, 1066, 1704, 1936
DraIII CACNNNGTG 2 cut(s) 643, 1510
EaeI YGGCCR 1 cut(s) 2091
Eam1104I CTCTTC 2 cut(s) 1431, 1758
EarI CTCTTC 2 cut(s) 1431, 1758
Eco130I CCWWGG 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 1951
Eco47III AGCGCT 2 cut(s) 190, 1616
Eco57I CTGAAG 4 cut(s) 435, 914, 925, 1028
Eco88I CYCGRG 2 cut(s) 355, 1588
Eco91I GGTNACC 1 cut(s) 534
EcoO65I GGTNACC 1 cut(s) 534
EcoRI GAATTC 1 cut(s) 686
EcoRII CCWGG 4 cut(s) 670, 1580, 1815, 2020
EcoT14I CCWWGG 1 cut(s) 395
EcoT22I ATGCAT 2 cut(s) 1045, 1933
EcoT38I GRGCYC 1 cut(s) 1951
ErhI CCWWGG 1 cut(s) 395
FaeI CATG 8 cut(s) 368, 836, 872, 956, 1047, 1055, 1320, 1931
FaqI GGGAC 1 cut(s) 1177
FatI CATG 8 cut(s) 364, 832, 868, 952, 1043, 1051, 1316, 1927
FauNDI CATATG 1 cut(s) 1933
Fnu4HI GCNGC 8 cut(s) 175, 1254, 1333, 1556, 1559, 1562, 1565, 2077
FokI GGATG 3 cut(s) 866, 1148, 1799
FriOI GRGCYC 1 cut(s) 1951
Fsp4HI GCNGC 8 cut(s) 175, 1254, 1333, 1556, 1559, 1562, 1565, 2077
FspBI CTAG 5 cut(s) 152, 396, 519, 567, 1094
GlaI GCGC 2 cut(s) 190, 1616
GluI GCNGC 8 cut(s) 175, 1254, 1333, 1556, 1559, 1562, 1565, 2077
GsaI CCCAGC 1 cut(s) 876
GsuI CTGGAG 2 cut(s) 1103, 1556
HaeII RGCGCY 2 cut(s) 192, 1618
HaeIII GGCC 1 cut(s) 2093
HapII CCGG 2 cut(s) 463, 1996
HhaI GCGC 2 cut(s) 191, 1617
Hin1II CATG 8 cut(s) 368, 836, 872, 956, 1047, 1055, 1320, 1931
Hin6I GCGC 2 cut(s) 189, 1615
HinP1I GCGC 2 cut(s) 189, 1615
HinfI GANTC 8 cut(s) 307, 439, 482, 522, 608, 1144, 1420, 1625
HpaII CCGG 2 cut(s) 463, 1996
HphI GGTGA 8 cut(s) 613, 718, 928, 1508, 1522, 1706, 1873, 2052
Hpy166II GTNNAC 2 cut(s) 980, 1676
Hpy188I TCNGA 7 cut(s) 51, 93, 649, 1192, 1630, 1901, 2004
Hpy188III TCNNGA 5 cut(s) 152, 1070, 1269, 1590, 1866
Hpy8I GTNNAC 2 cut(s) 980, 1676
HpyAV CCTTC 5 cut(s) 410, 427, 734, 949, 1003
HpyCH4III ACNGT 6 cut(s) 706, 809, 1100, 1805, 1823, 1845
HpyCH4IV ACGT 1 cut(s) 1740
HpyF10VI GCNNNNNNNGC 6 cut(s) 1561, 1564, 1573, 1614, 1996, 2082
HpyF3I CTNAG 5 cut(s) 285, 524, 693, 984, 1228
HpySE526I ACGT 1 cut(s) 1740
Hsp92II CATG 8 cut(s) 368, 836, 872, 956, 1047, 1055, 1320, 1931
HspAI GCGC 2 cut(s) 189, 1615
Kzo9I GATC 4 cut(s) 859, 1066, 1704, 1936
LmnI GCTCC 2 cut(s) 588, 649
Lsp1109I GCAGC 6 cut(s) 1240, 1319, 1542, 1548, 1570, 2088
LweI GCATC 4 cut(s) 318, 1126, 1380, 2008
MabI ACCWGGT 2 cut(s) 670, 1580
MaeI CTAG 5 cut(s) 152, 396, 519, 567, 1094
MaeII ACGT 1 cut(s) 1740
MaeIII GTNAC 3 cut(s) 534, 674, 2058
MalI GATC 4 cut(s) 861, 1068, 1706, 1938
MbiI CCGCTC 1 cut(s) 599
MboI GATC 4 cut(s) 859, 1066, 1704, 1936
MboII GAAGA 9 cut(s) 329, 337, 742, 907, 1363, 1418, 1745, 1849, 2095
MflI RGATCY 1 cut(s) 1704
MhlI GDGCHC 3 cut(s) 1589, 1678, 1951
MlyI GAGTC 4 cut(s) 301, 491, 516, 602
MmeI TCCRAC 5 cut(s) 253, 627, 756, 1329, 1458
Mph1103I ATGCAT 2 cut(s) 1045, 1933
MroXI GAANNNNTTC 1 cut(s) 828
MseI TTAA 3 cut(s) 554, 935, 1113
MslI CAYNNNNRTG 4 cut(s) 909, 1362, 1388, 1932
MspA1I CMGCKG 2 cut(s) 1561, 1576
MspI CCGG 2 cut(s) 463, 1996
MspR9I CCNGG 5 cut(s) 672, 1582, 1817, 1996, 2022
Mva1269I GAATGC 2 cut(s) 1889, 2099
MvaI CCWGG 4 cut(s) 672, 1582, 1817, 2022
MvnI CGCG 1 cut(s) 1418
MwoI GCNNNNNNNGC 6 cut(s) 1561, 1564, 1573, 1614, 1996, 2082
NciI CCSGG 1 cut(s) 1996
NdeI CATATG 1 cut(s) 1933
NdeII GATC 4 cut(s) 859, 1066, 1704, 1936
NlaIII CATG 8 cut(s) 368, 836, 872, 956, 1047, 1055, 1320, 1931
NlaIV GGNNCC 2 cut(s) 1234, 1706
NmeAIII GCCGAG 1 cut(s) 1942
NmuCI GTSAC 1 cut(s) 2058
NsiI ATGCAT 2 cut(s) 1045, 1933
NspI RCATGY 3 cut(s) 1047, 1055, 1320
PaeR7I CTCGAG 2 cut(s) 355, 1588
PctI GAATGC 2 cut(s) 1889, 2099
PdmI GAANNNNTTC 1 cut(s) 828
PfeI GAWTC 4 cut(s) 439, 1144, 1420, 1625
PflMI CCANNNNNTGG 1 cut(s) 2021
PkrI GCNGC 8 cut(s) 176, 1255, 1334, 1557, 1560, 1563, 1566, 2078
Ple19I CGATCG 1 cut(s) 862
PleI GAGTC 4 cut(s) 301, 490, 516, 602
PpsI GAGTC 4 cut(s) 301, 490, 516, 602
PshBI ATTAAT 1 cut(s) 1113
Psp6I CCWGG 4 cut(s) 670, 1580, 1815, 2020
PspEI GGTNACC 1 cut(s) 534
PspFI CCCAGC 1 cut(s) 872
PspGI CCWGG 4 cut(s) 670, 1580, 1815, 2020
PspN4I GGNNCC 2 cut(s) 1234, 1706
PspXI VCTCGAGB 1 cut(s) 355
PstI CTGCAG 1 cut(s) 1560
PstNI CAGNNNCTG 1 cut(s) 1843
PsuI RGATCY 1 cut(s) 1704
PvuI CGATCG 1 cut(s) 862
PvuII CAGCTG 2 cut(s) 1561, 1576
RsaI GTAC 6 cut(s) 282, 379, 811, 979, 1368, 1415
RsaNI GTAC 6 cut(s) 281, 378, 810, 978, 1367, 1414
RseI CAYNNNNRTG 4 cut(s) 909, 1362, 1388, 1932
SaqAI TTAA 3 cut(s) 554, 935, 1113
SatI GCNGC 8 cut(s) 175, 1254, 1333, 1556, 1559, 1562, 1565, 2077
Sau3AI GATC 4 cut(s) 859, 1066, 1704, 1936
ScaI AGTACT 1 cut(s) 379
SchI GAGTC 4 cut(s) 301, 491, 516, 602
ScrFI CCNGG 5 cut(s) 672, 1582, 1817, 1996, 2022
SduI GDGCHC 3 cut(s) 1589, 1678, 1951
SexAI ACCWGGT 2 cut(s) 670, 1580
SfaNI GCATC 4 cut(s) 318, 1126, 1380, 2008
SfcI CTRYAG 1 cut(s) 1556
Sfr274I CTCGAG 2 cut(s) 355, 1588
SlaI CTCGAG 2 cut(s) 355, 1588
SmiMI CAYNNNNRTG 4 cut(s) 909, 1362, 1388, 1932
SmlI CTYRAG 4 cut(s) 355, 1588, 1618, 1793
SmoI CTYRAG 4 cut(s) 355, 1588, 1618, 1793
SsiI CCGC 4 cut(s) 175, 599, 1462, 1564
SspMI CTAG 5 cut(s) 152, 396, 519, 567, 1094
StyD4I CCNGG 5 cut(s) 670, 1580, 1815, 1994, 2020
StyI CCWWGG 1 cut(s) 395
TaaI ACNGT 6 cut(s) 706, 809, 1100, 1805, 1823, 1845
TaiI ACGT 1 cut(s) 1743
TaqI TCGA 7 cut(s) 32, 170, 356, 515, 862, 1589, 1692
TatI WGTACW 3 cut(s) 377, 809, 1366
TauI GCSGC 2 cut(s) 177, 1567
TfiI GAWTC 4 cut(s) 439, 1144, 1420, 1625
Tru1I TTAA 3 cut(s) 554, 935, 1113
Tru9I TTAA 3 cut(s) 554, 935, 1113
TscAI CASTG 8 cut(s) 184, 697, 804, 1498, 1683, 1706, 1810, 2022
TseFI GTSAC 1 cut(s) 2058
TseI GCWGC 6 cut(s) 1253, 1332, 1555, 1558, 1561, 2076
Tsp45I GTSAC 1 cut(s) 2058
TspGWI ACGGA 2 cut(s) 494, 1904
TspRI CASTG 8 cut(s) 184, 697, 804, 1498, 1683, 1706, 1810, 2022
Van91I CCANNNNNTGG 1 cut(s) 2021
VneI GTGCAC 1 cut(s) 1674
VspI ATTAAT 1 cut(s) 1113
XapI RAATTY 6 cut(s) 158, 472, 582, 662, 686, 2113
XbaI TCTAGA 1 cut(s) 151
XceI RCATGY 3 cut(s) 1047, 1055, 1320
XcmI CCANNNNNNNNNTGG 1 cut(s) 1270
XhoI CTCGAG 2 cut(s) 355, 1588
XmaJI CCTAGG 1 cut(s) 395
XmnI GAANNNNTTC 1 cut(s) 828
XspI CTAG 5 cut(s) 152, 396, 519, 567, 1094
ZrmI AGTACT 1 cut(s) 379
Zsp2I ATGCAT 2 cut(s) 1045, 1933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.