Rw5G021330

Protein of unknown function (DUF2921)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
28659091 .. 28661931
2841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G021330.1

Sequence Viewer

Length: 2772 bp
ATGACTAAAGAACCTATGGCCATTTTCACGAAAATTTTCATTTTCTTCTTTGTTTTTGTCACACGTTCGTTAAACTCTGTTTCGTCCTCCACTTCAGATGCTCAAGTGTATTTTGCTGATCATTGTGCTTCAATTGCTCCTCCTCACTACTCAACCCCACAAAGATATGCCGGACTTAATTCCTCTGTTCACCGCCTTACCGGTTTCTACTACAGTGCTGGTGAAACTAACATTCTTAGTCAGAACTCAATTGTATTCCGCTTCCGGAATGATGGAGCAGCGGATGAACAAGGCTTGTTCATGGTCCAAGGAAGTCTTCGATTTCCTAGTGACAGTACATATAACCTTGTGGGAAACTCTACAAGGAGCTGGCAATCCACCGACTTGAGAGTTCCATATGGACAGCGTCCCAGAAGCTTTAGGCTAAATGGGGTCTGGTCAGAATCTTCTGGGGAGCTTTGTATGGTTGGATCAGGTTCTAATTCCTCGGACCAAGGTAATTTACTGACCTTTCCTGTGGTTCTTAAACTACATAAACTCAAGAGTTCAAGTAGTCTTACTAGTTTAATTAGTGGCAGCTTAGAGAGCTTGGTAACTTCTAAGAATGAACCAAATTATTTTGGACCAGTCTCTATATCATTGCTTCCTTCCATGAACTACCAGTACACTTTTGTTTCAAACAAATCTCATAACAGCTATTCGGATGGAAGTGTTGTTCCCCCAAGTTCTTTAAAAATAGGGAGATTTTGCAGGGTTTTCTCAAAAGCAATACAATTCCGTGAGTTACAACTGAGATATTCAAGCCATTGTGGTTCTGCAAACAACTGCTCTCCTCTTGCTGTGTTTGATTTGCCTCGCGTCATGTCGTTGAATAATATTGAGTGTTTGGAGGATAGAAAAAAGTTGCGAGTTCTGGTAGATTTTGCAGCCAGTAGCATCAGTTACCAGAGGCCTTTCAATCCAACTACAACATTGGTTGCCGAAGGTTCATGGGATGCAAGGAAAAATCAGCTAAATGTTGTTGCTTGTCGGTTCGTGCATGCAAGGAATTCTTTTAGTCCTAGTCATGTGGGTGATTGTTCAACACGATTGACAATGGGATTTCCTTCAATATGGACAATTGGAAATTCTAGCTGCATTGTGGGGAAAATTTGGAGCAACAAATCCGTGACAGAGGCCGGTTACTTCGAAAACATCACATTTGACAGTCCTCAAAGTGATTCAGCTGTATTTCCAGGCCAGAGGTATGAGTATACCAAAATAGACAAAGCAACAAAGTTGTGCCCAAGAAAGAAGACTGATGCTGATGACAAGAACAACATTTATCCAAATCCTTTTTCTTATTACATGGGATTGGATATTACAGCCAACAGTTCTACAGGAGAAGTTGGACGGGGCTATTCTGTCCCTCTCTCTGTTGATAACAAATTCTTCCAACCGTATTGGTACTCTCTGGAAGATGGAACTGAAGAATACCTTGGAGCTCCTGTGAGTGCTCCTGTGAGCGATAGAAACAACAATAGCAACAGGTACAACATCAGCTACAGAATAAGCATTAAAGCAGTAGATGGGGTTAGGCTTCCCAGTGGAGTGTCCCAACTTAATTCATTATATGAGATGGGGATTTTTGCTGAAGGGATATATGATGGCAGAGATGGAAGCCTGTGTATGGTAGGTTGCCGATACTTGAGCTCAAACAGTCACCAACAGCCAACATATGATTCTGTAGACTGTGAGATTGTTGTCAATGTTCAGTTTCCTCCAACAAATCCAAACAGTACCTATTCGGGTTTTATCAAGGGAAGCATCGAAAGCACACGAGAAATGTCTGATCCTCTTCATTTTGAGGGATTGGATTTGACCTCAGCTGCTGGTAACATGGTCGAAGCAAGCCAATCCATTTGGAGAATGGATGTGGAGATCATATTGGTTGTTATATCCAACACACTCGCTTGTGTTTTTGGGGCATTACAACTCTTTCATGTGAAACGGAATCCGGATGTGCTCCCATCCATTTCTATCTTGATGCTGTATATTCTTGCTCTTGGCTACATGATACCTCTTATGCTAAACTTTGATGCCTTGTTCACACAACATGGTAGCCAAACTGTGTTCCTTGGAAGTGGATGGCTTGAACTCAATGAAGTAATTGTAAGGGTAGTAACAATGGTAGGTTTCTTGCTGCAAATTCGTCTTCTGCAGATAACAATGTCAGCAAAATCAGCAAATGGAAACCAAAAGGAGCTCTGGGCAGTGGAGAAGCTGGCTCTCTTTGTGGCTTTACCAGTATATGTTGGAGGGTCCTTGGTTGCTTTGCTTCTGATGAACTGGAGGAGGAACGATATTGCTGTGATGGTTTCGAGTGGTCAAAAGCATCCCATTTTGGGTACTATTTTGAAATCTTGTGCTGGTTTGTTCTTGGATGCATTTTTGTTCCCTCAAATTCTTCTCAACATGTTCTCCAAATCAACGGAAAAGGCATTGTCAGTTTCGTTCTTCGTTGGAACAACTCTTGTTCGTGTGCTGCCACATGCATATGATCTTTACAGGGCTCATACCTCTGGTCACCAATTGAAAGATTCATACATTTATGCAAGCCCTGCAGCAGACTTTTACTCTACTGCTTGGAATGTCATTATTCCTTTTGGAGGTCTACTTTTTGCTGTGATAATCTACTTGCAGCAGCGCTTTGGGGGTTGCTGCATTCTTCCTCAGAAGTTCATAGAGTTGGGTGAATATGAGAAGGTGCCTATCGTTACTGAAGCGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

923

Amino Acids

102.27

Weight (kDa)

8.0

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 67 - 211 1.8e-17 DUF2921 lipocalin-like domain
DUF2921_N PF25333 232 - 400 5.6e-26 DUF2921 lipocalin-like domain
DUF2921_N PF25333 426 - 618 8.8e-31 DUF2921 lipocalin-like domain
DUF2921 PF11145 630 - 907 1.7e-60 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2746
AccI GTMKAC 3 cut(s) 1253, 1728, 2653
AccII CGCG 1 cut(s) 858
AccIII TCCGGA 2 cut(s) 264, 1996
AciI CCGC 3 cut(s) 193, 259, 281
AclWI GGATC 2 cut(s) 478, 1826
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 7 cut(s) 33, 1048, 1126, 1149, 1427, 2187, 2442
AcuI CTGAAG 3 cut(s) 78, 1488, 1653
AfaI GTAC 6 cut(s) 337, 665, 1448, 1532, 1780, 2389
AfeI AGCGCT 1 cut(s) 2687
AfiI CCNNNNNNNGG 3 cut(s) 1669, 2384, 2648
AflIII ACRYGT 2 cut(s) 62, 2454
AgeI ACCGGT 1 cut(s) 200
AhlI ACTAGT 1 cut(s) 560
AjnI CCWGG 1 cut(s) 1234
AjuI GAANNNNNNNTTGG 8 cut(s) 300, 332, 1321, 1353, 1461, 1493, 1705, 1737
AloI GAACNNNNNNTCC 2 cut(s) 699, 731
Alw21I GWGCWC 5 cut(s) 1486, 1498, 1694, 2007, 2247
Alw26I GTCTC 1 cut(s) 634
AlwI GGATC 2 cut(s) 478, 1826
AlwNI CAGNNNCTG 1 cut(s) 1871
Aor13HI TCCGGA 2 cut(s) 264, 1996
Aor51HI AGCGCT 1 cut(s) 2687
AoxI GGCC 4 cut(s) 18, 950, 1176, 1237
ApoI RAATTY 7 cut(s) 33, 1048, 1126, 1149, 1427, 2187, 2442
AsiGI ACCGGT 1 cut(s) 200
Asp700I GAANNNNTTC 1 cut(s) 35
AspLEI GCGC 1 cut(s) 2688
AspS9I GGNCC 4 cut(s) 304, 490, 623, 2301
AsuHPI GGTGA 6 cut(s) 182, 233, 1085, 1694, 2558, 2744
AsuII TTCGAA 1 cut(s) 1188
AvaII GGWCC 4 cut(s) 304, 490, 623, 2301
BaeGI GKGCMC 1 cut(s) 1286
BalI TGGCCA 1 cut(s) 20
BanI GGYRCC 1 cut(s) 2746
BanII GRGCYC 4 cut(s) 1486, 1694, 2247, 2554
BauI CACGAG 1 cut(s) 1818
BbsI GAAGAC 3 cut(s) 308, 1301, 2186
Bbv12I GWGCWC 5 cut(s) 1486, 1498, 1694, 2007, 2247
BbvCI CCTCAGC 1 cut(s) 1864
BciT130I CCWGG 1 cut(s) 1236
BclI TGATCA 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 634
BcuI ACTAGT 1 cut(s) 560
BfaI CTAG 4 cut(s) 327, 561, 1062, 1131
BfmI CTRYAG 6 cut(s) 211, 1377, 1543, 1725, 2198, 2601
BfoI RGCGCY 1 cut(s) 2689
Bme1390I CCNGG 1 cut(s) 1236
Bme18I GGWCC 4 cut(s) 304, 490, 623, 2301
BmgT120I GGNCC 4 cut(s) 304, 490, 623, 2301
BmiI GGNNCC 2 cut(s) 2302, 2748
BmrFI CCNGG 1 cut(s) 1236
BmrI ACTGGG 1 cut(s) 1578
BmsI GCATC 9 cut(s) 88, 945, 985, 1291, 1815, 2016, 2068, 2383, 2413
BmuI ACTGGG 1 cut(s) 1578
BpiI GAAGAC 3 cut(s) 308, 1301, 2186
BpmI CTGGAG 1 cut(s) 2350
Bpu10I CCTNAGC 1 cut(s) 1864
Bpu14I TTCGAA 1 cut(s) 1188
BpuEI CTTGAG 4 cut(s) 87, 406, 524, 1708
BsaJI CCNNGG 6 cut(s) 307, 486, 493, 1477, 2116, 2304
BsaWI WCCGGW 3 cut(s) 200, 264, 1996
BsaXI ACNNNNNCTCC 4 cut(s) 1473, 1503, 2444, 2474
Bsc4I CCNNNNNNNGG 3 cut(s) 1669, 2384, 2648
Bse118I RCCGGY 2 cut(s) 200, 1178
Bse1I ACTGG 6 cut(s) 626, 661, 930, 1584, 2285, 2333
Bse3DI GCAATG 1 cut(s) 638
BseAI TCCGGA 2 cut(s) 264, 1996
BseBI CCWGG 1 cut(s) 1236
BseDI CCNNGG 6 cut(s) 307, 486, 493, 1477, 2116, 2304
BseGI GGATG 9 cut(s) 289, 709, 1000, 1918, 2005, 2009, 2132, 2374, 2428
BseLI CCNNNNNNNGG 3 cut(s) 1669, 2384, 2648
BseMI GCAATG 1 cut(s) 638
BseMII CTCAG 3 cut(s) 782, 1878, 2726
BseNI ACTGG 6 cut(s) 626, 661, 930, 1584, 2285, 2333
BseRI GAGGAG 4 cut(s) 129, 132, 822, 2347
BseSI GKGCMC 1 cut(s) 1286
Bsh1236I CGCG 1 cut(s) 858
BshFI GGCC 4 cut(s) 20, 952, 1178, 1239
BshNI GGYRCC 1 cut(s) 2746
BshTI ACCGGT 1 cut(s) 200
BsiHKAI GWGCWC 5 cut(s) 1486, 1498, 1694, 2007, 2247
BsiSI CCGG 5 cut(s) 171, 201, 265, 1179, 1997
BslFI GGGAC 3 cut(s) 393, 1391, 1579
BslI CCNNNNNNNGG 3 cut(s) 1669, 2384, 2648
BsmAI GTCTC 1 cut(s) 634
BsmFI GGGAC 3 cut(s) 393, 1391, 1579
BsmI GAATGC 1 cut(s) 2703
BsnI GGCC 4 cut(s) 20, 952, 1178, 1239
Bsp119I TTCGAA 1 cut(s) 1188
Bsp1286I GDGCHC 7 cut(s) 1286, 1486, 1498, 1694, 2007, 2247, 2554
Bsp13I TCCGGA 2 cut(s) 264, 1996
Bsp143I GATC 5 cut(s) 118, 470, 1831, 1920, 2539
BspACI CCGC 3 cut(s) 193, 259, 281
BspANI GGCC 4 cut(s) 20, 952, 1178, 1239
BspCNI CTCAG 3 cut(s) 783, 1877, 2725
BspEI TCCGGA 2 cut(s) 264, 1996
BspFNI CGCG 1 cut(s) 858
BspLI GGNNCC 2 cut(s) 2302, 2748
BspMAI CTGCAG 2 cut(s) 2202, 2605
BspPI GGATC 2 cut(s) 478, 1826
BspT104I TTCGAA 1 cut(s) 1188
BspT107I GGYRCC 1 cut(s) 2746
BsrDI GCAATG 1 cut(s) 638
BsrFI RCCGGY 2 cut(s) 200, 1178
BsrI ACTGG 6 cut(s) 626, 661, 930, 1584, 2285, 2333
BssAI RCCGGY 2 cut(s) 200, 1178
BssECI CCNNGG 6 cut(s) 307, 486, 493, 1477, 2116, 2304
BssMI GATC 5 cut(s) 118, 470, 1831, 1920, 2539
BssNAI GTATAC 1 cut(s) 1254
BssSI CACGAG 1 cut(s) 1818
BssT1I CCWWGG 5 cut(s) 307, 493, 1477, 2116, 2304
Bst1107I GTATAC 1 cut(s) 1254
Bst2BI CACGAG 1 cut(s) 1818
Bst2UI CCWGG 1 cut(s) 1236
Bst4CI ACNGT 9 cut(s) 215, 335, 1208, 1373, 1440, 1700, 1733, 1778, 2110
Bst6I CTCTTC 1 cut(s) 1842
BstAPI GCANNNNNTGC 1 cut(s) 2600
BstBI TTCGAA 1 cut(s) 1188
BstC8I GCNNGC 5 cut(s) 371, 1041, 1891, 2265, 2596
BstDEI CTNAG 6 cut(s) 236, 580, 600, 791, 1864, 2712
BstEII GGTNACC 1 cut(s) 2564
BstENI CCTNNNNNAGG 1 cut(s) 2646
BstF5I GGATG 9 cut(s) 289, 709, 1000, 1918, 2005, 2009, 2132, 2374, 2428
BstFNI CGCG 1 cut(s) 858
BstH2I RGCGCY 1 cut(s) 2689
BstHHI GCGC 1 cut(s) 2688
BstKTI GATC 5 cut(s) 121, 473, 1834, 1923, 2542
BstMAI GTCTC 1 cut(s) 634
BstMBI GATC 5 cut(s) 118, 470, 1831, 1920, 2539
BstMWI GCNNNNNNNGC 5 cut(s) 134, 585, 1812, 2222, 2600
BstNI CCWGG 1 cut(s) 1236
BstNSI RCATGY 3 cut(s) 1043, 2458, 2534
BstPI GGTNACC 1 cut(s) 2564
BstSCI CCNGG 1 cut(s) 1234
BstSFI CTRYAG 6 cut(s) 211, 1377, 1543, 1725, 2198, 2601
BstSLI GKGCMC 1 cut(s) 1286
BstUI CGCG 1 cut(s) 858
BstV2I GAAGAC 3 cut(s) 308, 1301, 2186
BstZ17I GTATAC 1 cut(s) 1254
BsuRI GGCC 4 cut(s) 20, 952, 1178, 1239
BtsCI GGATG 9 cut(s) 289, 709, 1000, 1918, 2005, 2009, 2132, 2374, 2428
BtsI GCAGTG 1 cut(s) 2259
BtsIMutI CAGTG 3 cut(s) 220, 1591, 2259
Cac8I GCNNGC 5 cut(s) 371, 1041, 1891, 2265, 2596
CaiI CAGNNNCTG 1 cut(s) 1871
CfoI GCGC 1 cut(s) 2688
Cfr10I RCCGGY 2 cut(s) 200, 1178
Cfr13I GGNCC 4 cut(s) 304, 490, 623, 2301
CseI GACGC 3 cut(s) 395, 847, 2754
Csp6I GTAC 6 cut(s) 336, 664, 1447, 1531, 1779, 2388
CspAI ACCGGT 1 cut(s) 200
CviQI GTAC 6 cut(s) 336, 664, 1447, 1531, 1779, 2388
DdeI CTNAG 6 cut(s) 236, 580, 600, 791, 1864, 2712
DpnI GATC 5 cut(s) 120, 472, 1833, 1922, 2541
DpnII GATC 5 cut(s) 118, 470, 1831, 1920, 2539
DraI TTTAAA 1 cut(s) 732
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 1842
EarI CTCTTC 1 cut(s) 1842
Ecl136II GAGCTC 3 cut(s) 1484, 1692, 2245
Eco130I CCWWGG 5 cut(s) 307, 493, 1477, 2116, 2304
Eco147I AGGCCT 1 cut(s) 952
Eco24I GRGCYC 4 cut(s) 1486, 1694, 2247, 2554
Eco47I GGWCC 4 cut(s) 304, 490, 623, 2301
Eco47III AGCGCT 1 cut(s) 2687
Eco53kI GAGCTC 3 cut(s) 1484, 1692, 2245
Eco57I CTGAAG 3 cut(s) 78, 1488, 1653
Eco91I GGTNACC 1 cut(s) 2564
EcoICRI GAGCTC 3 cut(s) 1484, 1692, 2245
EcoNI CCTNNNNNAGG 1 cut(s) 2646
EcoO109I RGGNCCY 1 cut(s) 2301
EcoO65I GGTNACC 1 cut(s) 2564
EcoRI GAATTC 1 cut(s) 1048
EcoRII CCWGG 1 cut(s) 1234
EcoT14I CCWWGG 5 cut(s) 307, 493, 1477, 2116, 2304
EcoT22I ATGCAT 2 cut(s) 2428, 2536
EcoT38I GRGCYC 4 cut(s) 1486, 1694, 2247, 2554
ErhI CCWWGG 5 cut(s) 307, 493, 1477, 2116, 2304
FalI AAGNNNNNCTT 6 cut(s) 300, 332, 1036, 1068, 1461, 1493
FaqI GGGAC 3 cut(s) 393, 1391, 1579
FauNDI CATATG 3 cut(s) 397, 1717, 2536
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 3 cut(s) 1253, 1728, 2653
FokI GGATG 9 cut(s) 296, 716, 1007, 1925, 1996, 2012, 2139, 2361, 2435
FriOI GRGCYC 4 cut(s) 1486, 1694, 2247, 2554
FspBI CTAG 4 cut(s) 327, 561, 1062, 1131
GlaI GCGC 1 cut(s) 2687
GsuI CTGGAG 1 cut(s) 2350
HaeII RGCGCY 1 cut(s) 2689
HaeIII GGCC 4 cut(s) 20, 952, 1178, 1239
HapII CCGG 5 cut(s) 171, 201, 265, 1179, 1997
HgaI GACGC 3 cut(s) 395, 847, 2754
HhaI GCGC 1 cut(s) 2688
Hin6I GCGC 1 cut(s) 2686
HinP1I GCGC 1 cut(s) 2686
HindIII AAGCTT 1 cut(s) 415
HinfI GANTC 5 cut(s) 443, 1220, 1721, 1993, 2579
HpaII CCGG 5 cut(s) 171, 201, 265, 1179, 1997
HphI GGTGA 6 cut(s) 182, 233, 1085, 1694, 2558, 2744
Hpy166II GTNNAC 6 cut(s) 190, 666, 1254, 1729, 2088, 2654
Hpy188I TCNGA 8 cut(s) 97, 243, 442, 490, 703, 1831, 2322, 2715
Hpy188III TCNNGA 6 cut(s) 28, 265, 541, 1454, 1997, 2023
Hpy8I GTNNAC 6 cut(s) 190, 666, 1254, 1729, 2088, 2654
HpyAV CCTTC 5 cut(s) 657, 977, 1116, 1628, 2737
HpyCH4III ACNGT 9 cut(s) 215, 335, 1208, 1373, 1440, 1700, 1733, 1778, 2110
HpyCH4IV ACGT 1 cut(s) 64
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 585, 1812, 2222, 2600
HpyF3I CTNAG 6 cut(s) 236, 580, 600, 791, 1864, 2712
HpySE526I ACGT 1 cut(s) 64
HspAI GCGC 1 cut(s) 2686
Kpn2I TCCGGA 2 cut(s) 264, 1996
Ksp22I TGATCA 1 cut(s) 118
Kzo9I GATC 5 cut(s) 118, 470, 1831, 1920, 2539
LweI GCATC 9 cut(s) 88, 945, 985, 1291, 1815, 2016, 2068, 2383, 2413
MaeI CTAG 4 cut(s) 327, 561, 1062, 1131
MaeII ACGT 1 cut(s) 64
MalI GATC 5 cut(s) 120, 472, 1833, 1922, 2541
MboI GATC 5 cut(s) 118, 470, 1831, 1920, 2539
MfeI CAATTG 4 cut(s) 132, 249, 1119, 2570
MhlI GDGCHC 7 cut(s) 1286, 1486, 1498, 1694, 2007, 2247, 2554
MlsI TGGCCA 1 cut(s) 20
MluNI TGGCCA 1 cut(s) 20
MmeI TCCRAC 8 cut(s) 448, 986, 1369, 1459, 1787, 1965, 2275, 2482
Mox20I TGGCCA 1 cut(s) 20
Mph1103I ATGCAT 2 cut(s) 2428, 2536
MroI TCCGGA 2 cut(s) 264, 1996
MroXI GAANNNNTTC 1 cut(s) 35
MscI TGGCCA 1 cut(s) 20
MseI TTAA 8 cut(s) 71, 177, 525, 566, 731, 1557, 1602, 2770
MslI CAYNNNNRTG 2 cut(s) 1071, 2535
Msp20I TGGCCA 1 cut(s) 20
MspA1I CMGCKG 3 cut(s) 281, 1226, 1868
MspI CCGG 5 cut(s) 171, 201, 265, 1179, 1997
MspR9I CCNGG 1 cut(s) 1236
MunI CAATTG 4 cut(s) 132, 249, 1119, 2570
Mva1269I GAATGC 1 cut(s) 2703
MvaI CCWGG 1 cut(s) 1236
MvnI CGCG 1 cut(s) 858
MwoI GCNNNNNNNGC 5 cut(s) 134, 585, 1812, 2222, 2600
NdeI CATATG 3 cut(s) 397, 1717, 2536
NdeII GATC 5 cut(s) 118, 470, 1831, 1920, 2539
NlaIV GGNNCC 2 cut(s) 2302, 2748
NmuCI GTSAC 5 cut(s) 58, 329, 1168, 1700, 2564
NsiI ATGCAT 2 cut(s) 2428, 2536
NspI RCATGY 3 cut(s) 1043, 2458, 2534
NspV TTCGAA 1 cut(s) 1188
PaeI GCATGC 1 cut(s) 1043
PceI AGGCCT 1 cut(s) 952
PciI ACATGT 1 cut(s) 2454
PctI GAATGC 1 cut(s) 2703
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 5 cut(s) 443, 1220, 1721, 1993, 2579
PflFI GACNNNGTC 1 cut(s) 405
PinAI ACCGGT 1 cut(s) 200
PpuMI RGGWCCY 1 cut(s) 2301
PscI ACATGT 1 cut(s) 2454
Psp124BI GAGCTC 3 cut(s) 1486, 1694, 2247
Psp5II RGGWCCY 1 cut(s) 2301
Psp6I CCWGG 1 cut(s) 1234
PspEI GGTNACC 1 cut(s) 2564
PspGI CCWGG 1 cut(s) 1234
PspN4I GGNNCC 2 cut(s) 2302, 2748
PspPI GGNCC 4 cut(s) 304, 490, 623, 2301
PspPPI RGGWCCY 1 cut(s) 2301
PsrI GAACNNNNNNTAC 2 cut(s) 647, 679
PstI CTGCAG 2 cut(s) 2202, 2605
PstNI CAGNNNCTG 1 cut(s) 1871
PsyI GACNNNGTC 1 cut(s) 405
PvuII CAGCTG 2 cut(s) 1226, 1868
RsaI GTAC 6 cut(s) 337, 665, 1448, 1532, 1780, 2389
RsaNI GTAC 6 cut(s) 336, 664, 1447, 1531, 1779, 2388
RseI CAYNNNNRTG 2 cut(s) 1071, 2535
SacI GAGCTC 3 cut(s) 1486, 1694, 2247
SaqAI TTAA 8 cut(s) 71, 177, 525, 566, 731, 1557, 1602, 2770
Sau3AI GATC 5 cut(s) 118, 470, 1831, 1920, 2539
Sau96I GGNCC 4 cut(s) 304, 490, 623, 2301
ScrFI CCNGG 1 cut(s) 1236
SduI GDGCHC 7 cut(s) 1286, 1486, 1498, 1694, 2007, 2247, 2554
SfaNI GCATC 9 cut(s) 88, 945, 985, 1291, 1815, 2016, 2068, 2383, 2413
SfcI CTRYAG 6 cut(s) 211, 1377, 1543, 1725, 2198, 2601
SfuI TTCGAA 1 cut(s) 1188
SinI GGWCC 4 cut(s) 304, 490, 623, 2301
SmiMI CAYNNNNRTG 2 cut(s) 1071, 2535
SmlI CTYRAG 4 cut(s) 102, 385, 539, 1687
SmoI CTYRAG 4 cut(s) 102, 385, 539, 1687
SpeI ACTAGT 1 cut(s) 560
SphI GCATGC 1 cut(s) 1043
SseBI AGGCCT 1 cut(s) 952
SsiI CCGC 3 cut(s) 193, 259, 281
SspI AATATT 1 cut(s) 877
SspMI CTAG 4 cut(s) 327, 561, 1062, 1131
SstI GAGCTC 3 cut(s) 1486, 1694, 2247
StuI AGGCCT 1 cut(s) 952
StyD4I CCNGG 1 cut(s) 1234
StyI CCWWGG 5 cut(s) 307, 493, 1477, 2116, 2304
TaaI ACNGT 9 cut(s) 215, 335, 1208, 1373, 1440, 1700, 1733, 1778, 2110
TaiI ACGT 1 cut(s) 67
TaqI TCGA 5 cut(s) 319, 1188, 1809, 1884, 2360
TatI WGTACW 2 cut(s) 335, 663
TfiI GAWTC 5 cut(s) 443, 1220, 1721, 1993, 2579
Tru1I TTAA 8 cut(s) 71, 177, 525, 566, 731, 1557, 1602, 2770
Tru9I TTAA 8 cut(s) 71, 177, 525, 566, 731, 1557, 1602, 2770
TscAI CASTG 3 cut(s) 220, 1591, 2259
TseFI GTSAC 5 cut(s) 58, 329, 1168, 1700, 2564
Tsp45I GTSAC 5 cut(s) 58, 329, 1168, 1700, 2564
TspGWI ACGGA 4 cut(s) 767, 1156, 2005, 2486
TspRI CASTG 3 cut(s) 220, 1591, 2259
Tth111I GACNNNGTC 1 cut(s) 405
VpaK11BI GGWCC 4 cut(s) 304, 490, 623, 2301
XagI CCTNNNNNAGG 1 cut(s) 2646
XapI RAATTY 7 cut(s) 33, 1048, 1126, 1149, 1427, 2187, 2442
XceI RCATGY 3 cut(s) 1043, 2458, 2534
XcmI CCANNNNNNNNNTGG 1 cut(s) 1906
XmiI GTMKAC 3 cut(s) 1253, 1728, 2653
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 4 cut(s) 327, 561, 1062, 1131
Zsp2I ATGCAT 2 cut(s) 2428, 2536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.