Rmu_sc0008805.1_g000003

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008805.1
OG0000420
Physical Location & Seq
Reverse (-)
10639 .. 13497
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008805.1_g000003.1.cds

Sequence Viewer

Length: 2859 bp
atggagaccaatttaaaatccagggttagggctcttccaattttcccaaccactcctccacaaacccataaatccctactcactcccctcctcctcctcctcttcttcttcttcatcaatttcacccccacagcttcaaccccgaaccaaatccccaatcttgatcaactatactccaaacactgcaacgacgtcgttcccaaatcggagacgcaccccaagtggttcctcaccaccctctccatccaagacctcggattccacagcagttacttcaccggcggcgatcgccttttcaatcagagctccggcggccgcaaagctctcatcttccggcccaactacgtagctcgaaccctagcggatggaattttccatgtcaaaggaagtatggatcttcaatctcttctgggctattcgactcgccggaatctgaagttggttaagcccagaattccggtccggcggggcgtagtgaggtttaggcttgatgggtattattcagaatcgtcaaagaagctgtgtatgattgggaaagttatgtccatgtataatgcaggtgagtttgaggctagtgttgttcttaagcttaattatccgaaatggtctagtgtttatgattgtttgattactgggagtttagagagcgttgttattgctgagggcgatgatggtaagaattattttgatcccgttttgatgttgggtttgtctgtgaaacgtagttatgagtatacatttgttgggaaagataggctgagtagttttccgagtagtgttgatagaggagagagtatagctttggagaatttgaatgattcgagacgtgacttgtgtaggttgcttggtaaccgtcttgagagatatgaattggtgtatgggagtgagtgtggggctgtgaattgcaatcctcttggtggggatgttggatatgtacccggctcgttggttttttatgggactcggtgtacagaagggaggaaagtgcagatgttgttggggttttccaactccagtgtagatgaatacataagatttccatttgtgcctagcacgacgttcattgctgaaggggaatgggatgagaaggggaatcgtctatgcgcggttgcatgtaggattttgaattttacagaatctttggctagtgctcgtgttggagactgctcaactaaactcagcttgagatttccagtaaagttgtctttacaaaataggtctgctgttgtggggcaaatttggagcgacaaaaaagtgagtgatcctggttacttcagtaaaattgggttccaaggtttgtcgggatggttagtgaaactcttaggatacaaatatgaatattctgtgaacgacaacctgagaaaaacatgtgcggaaaagagggctgggagagggaaaggaaagcgatatcctgaggagtattcatcagatctgaaatttgacatgagagcgagcaacagcaaaggacaagttgcatggggttattcatcgccattatttgttgatgatgaccggatttatggacgccggttttgggataaaccacaggaaacagaagtaccaagtcgtcggaagaaaagccatagcagtccgatgaacattacctataagttgagcttcacacgtggtgttcaattttttcatgatgtcttcccatctaaagcagaactagcttcagaaggaatatatgatagagattatggaaacctatgcatgataggatgtaggcatgtaccatccaaggaacaaaattcgattaaaaaggatatgttagactgttctgttaaaattgatgtacactttcctccattggataccaaggatggccagaatgtcaagggaactattgaaagcacgaggaataagtcagaccctctttattttgaacgtattgacttctcttcgacttcaatttaccataaccaagctgctgcatccattacgagaatcgattttgagattgttatggttttgatttccaatacacttgcatgtgcttttgtcggatggcagctctattttgtgaagaaaaacccagatgtgctcccattcacttcaattgtcatgctcattgttcttactctgggatacgtgattcctcttctgttcaactttgaagcaatgcttgcaccaaaccaaagcaagcagagtacttttcttgggattggtggatggctccaggttaatgaagtaatggtcagggtgataatgttggtaactttcattttgcagctgcttcttctccaactgacctggtcatcgagacaaggtgataatagccagaagagcttgatggattctgagaggaaggttctttatgccaccttactattgtacacagctggtgcactgattacttgctctgtccaccagtggacgagtgctcaccagaactcatacaggccatttcatcgcaagcttcggcgagtggctaacctatggcatcttgttcacccgcaacgctctctctgggacgacctcaagtcttatgctggattcatcctggacggttttctactcccgcaaatattgttcaacttattcgtcaattcaggtgaaaaggctctgtcctgtgccttttactttggaaccaccatgattcgtctgctgcctcatgcttatgatctgtacagagctcgcgcttacacatggttacttgctttctcatatatttatgcaaaccccagaaccgattttttctccactgcctggaacataatcataccctgttgttgtctgctgcttgctgccattattttcttgcagcaaaggtttggcggccgttgcatccttcccaaaatatttgggcattccactgtatatgaaaaggtccctgtcatcagcaatgaggaattgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

952

Amino Acids

108.05

Weight (kDa)

9.22

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 548
AatII GACGTC 1 cut(s) 195
Acc36I ACCTGC 1 cut(s) 548
AccB7I CCANNNNNTGG 1 cut(s) 2709
AccI GTMKAC 1 cut(s) 734
AccII CGCG 2 cut(s) 1106, 2640
AclWI GGATC 3 cut(s) 402, 683, 1256
AcoI YGGCCR 3 cut(s) 313, 1825, 2779
AcsI RAATTY 7 cut(s) 369, 453, 808, 1126, 1236, 1436, 1750
AcuI CTGAAG 4 cut(s) 455, 1089, 1258, 1659
AcvI CACGTG 1 cut(s) 1625
AcyI GRCGYC 2 cut(s) 192, 1525
AdeI CACNNNGTG 1 cut(s) 1628
AfaI GTAC 8 cut(s) 936, 970, 1560, 1734, 1797, 2152, 2336, 2630
AfiI CCNNNNNNNGG 4 cut(s) 27, 917, 1534, 2709
AflII CTTAAG 1 cut(s) 584
AflIII ACRYGT 2 cut(s) 1367, 1622
AhdI GACNNNNNGTC 1 cut(s) 2482
AjiI CACGTC 1 cut(s) 827
AjnI CCWGG 6 cut(s) 20, 1264, 2178, 2252, 2502, 2708
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
Alw21I GWGCWC 6 cut(s) 308, 1153, 2046, 2350, 2386, 2638
Alw26I GTCTC 4 cut(s) 203, 817, 1155, 2257
Alw44I GTGCAC 1 cut(s) 2346
AlwI GGATC 3 cut(s) 402, 683, 1256
AoxI GGCC 5 cut(s) 313, 335, 1825, 2402, 2779
ApaLI GTGCAC 1 cut(s) 2346
ApeKI GCWGC 9 cut(s) 1928, 1931, 2011, 2230, 2233, 2608, 2740, 2747, 2764
ApoI RAATTY 7 cut(s) 369, 453, 808, 1126, 1236, 1436, 1750
ArsI GACNNNNNNTTYG 2 cut(s) 1515, 1547
AsiSI GCGATCGC 1 cut(s) 289
AspLEI GCGC 2 cut(s) 1106, 2642
AspS9I GGNCC 3 cut(s) 336, 460, 2830
AsuC2I CCSGG 1 cut(s) 939
AsuHPI GGTGA 9 cut(s) 115, 223, 268, 572, 2215, 2282, 2378, 2444, 2567
AvaII GGWCC 2 cut(s) 460, 2830
AxyI CCTNAGG 1 cut(s) 1413
BaeGI GKGCMC 1 cut(s) 2350
BaeI ACNNNNGTAYC 2 cut(s) 1542, 1575
BalI TGGCCA 1 cut(s) 1827
BanII GRGCYC 3 cut(s) 34, 308, 2638
BauI CACGAG 2 cut(s) 1152, 1855
BbrPI CACGTG 1 cut(s) 1625
BbsI GAAGAC 1 cut(s) 1642
Bbv12I GWGCWC 6 cut(s) 308, 1153, 2046, 2350, 2386, 2638
BbvCI CCTCAGC 1 cut(s) 660
BbvI GCAGC 9 cut(s) 1915, 1918, 2023, 2220, 2242, 2595, 2727, 2734, 2776
BceAI ACGGC 1 cut(s) 2766
BcgI CGANNNNNNTGC 2 cut(s) 175, 209
BciT130I CCWGG 6 cut(s) 22, 1266, 2180, 2254, 2504, 2710
BciVI GTATCC 3 cut(s) 1319, 1807, 2081
BclI TGATCA 1 cut(s) 163
BcnI CCSGG 1 cut(s) 939
BcoDI GTCTC 4 cut(s) 203, 817, 1155, 2257
BfaI CTAG 6 cut(s) 359, 573, 609, 1050, 1146, 1670
BfrI CTTAAG 1 cut(s) 584
BfuAI ACCTGC 1 cut(s) 548
BfuI GTATCC 3 cut(s) 1319, 1807, 2081
BglII AGATCT 1 cut(s) 1429
BmcAI AGTACT 1 cut(s) 2152
Bme1390I CCNGG 7 cut(s) 22, 939, 1266, 2180, 2254, 2504, 2710
Bme18I GGWCC 2 cut(s) 460, 2830
BmeRI GACNNNNNGTC 1 cut(s) 2482
BmgBI CACGTC 1 cut(s) 827
BmgT120I GGNCC 3 cut(s) 336, 460, 2830
BmiI GGNNCC 5 cut(s) 227, 1289, 2177, 2590, 2832
BmrFI CCNGG 7 cut(s) 22, 939, 1266, 2180, 2254, 2504, 2710
BmrI ACTGGG 1 cut(s) 642
BmsI GCATC 3 cut(s) 1943, 2452, 2796
BmuI ACTGGG 1 cut(s) 642
BpiI GAAGAC 1 cut(s) 1642
BpmI CTGGAG 2 cut(s) 997, 2162
Bpu10I CCTNAGC 1 cut(s) 660
BpuEI CTTGAG 3 cut(s) 878, 1204, 2465
BpuMI CCSGG 1 cut(s) 939
Bsa29I ATCGAT 1 cut(s) 1950
BsaAI YACGTR 3 cut(s) 346, 1625, 2092
BsaHI GRCGYC 2 cut(s) 192, 1525
BsaJI CCNNGG 5 cut(s) 21, 253, 1291, 1740, 1818
BsaWI WCCGGW 2 cut(s) 457, 1512
BsaXI ACNNNNNCTCC 4 cut(s) 40, 70, 874, 904
Bsc4I CCNNNNNNNGG 4 cut(s) 27, 917, 1534, 2709
Bse118I RCCGGY 2 cut(s) 278, 1527
Bse1I ACTGG 4 cut(s) 637, 1014, 1193, 2371
Bse21I CCTNAGG 1 cut(s) 1413
Bse3DI GCAATG 3 cut(s) 1062, 2127, 2851
BseBI CCWGG 6 cut(s) 22, 1266, 2180, 2254, 2504, 2710
BseCI ATCGAT 1 cut(s) 1950
BseDI CCNNGG 5 cut(s) 21, 253, 1291, 1740, 1818
BseLI CCNNNNNNNGG 4 cut(s) 27, 917, 1534, 2709
BseMI GCAATG 3 cut(s) 1062, 2127, 2851
BseMII CTCAG 6 cut(s) 651, 749, 1192, 1349, 1404, 2292
BseNI ACTGG 4 cut(s) 637, 1014, 1193, 2371
BseRI GAGGAG 7 cut(s) 45, 80, 83, 86, 89, 801, 1430
BseSI GKGCMC 1 cut(s) 2350
BseX3I CGGCCG 2 cut(s) 313, 2779
BseXI GCAGC 9 cut(s) 1915, 1918, 2023, 2220, 2242, 2595, 2727, 2734, 2776
BseYI CCCAGC 1 cut(s) 1385
BsgI GTGCAG 1 cut(s) 1007
Bsh1236I CGCG 2 cut(s) 1106, 2640
Bsh1285I CGRYCG 3 cut(s) 289, 316, 2782
BshFI GGCC 5 cut(s) 315, 337, 1827, 2404, 2781
BshVI ATCGAT 1 cut(s) 1950
BsiEI CGRYCG 3 cut(s) 289, 316, 2782
BsiHKAI GWGCWC 6 cut(s) 308, 1153, 2046, 2350, 2386, 2638
BsiSI CCGG 9 cut(s) 279, 309, 334, 427, 458, 463, 939, 1513, 1528
BslFI GGGAC 3 cut(s) 973, 2486, 2816
BslI CCNNNNNNNGG 4 cut(s) 27, 917, 1534, 2709
BsmAI GTCTC 4 cut(s) 203, 817, 1155, 2257
BsmBI CGTCTC 2 cut(s) 203, 817
BsmFI GGGAC 3 cut(s) 973, 2486, 2816
BsmI GAATGC 1 cut(s) 2809
BsnI GGCC 5 cut(s) 315, 337, 1827, 2404, 2781
Bsp1286I GDGCHC 7 cut(s) 34, 308, 1153, 2046, 2350, 2386, 2638
Bsp1407I TGTACA 4 cut(s) 968, 1795, 2334, 2628
Bsp143I GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
BspANI GGCC 5 cut(s) 315, 337, 1827, 2404, 2781
BspCNI CTCAG 6 cut(s) 652, 750, 1191, 1350, 1405, 2293
BspDI ATCGAT 1 cut(s) 1950
BspFNI CGCG 2 cut(s) 1106, 2640
BspHI TCATGA 1 cut(s) 1642
BspLI GGNNCC 5 cut(s) 227, 1289, 2177, 2590, 2832
BspMI ACCTGC 1 cut(s) 548
BspPI GGATC 3 cut(s) 402, 683, 1256
BspQI GCTCTTC 2 cut(s) 39, 2279
BspTI CTTAAG 1 cut(s) 584
BsrDI GCAATG 3 cut(s) 1062, 2127, 2851
BsrFI RCCGGY 2 cut(s) 278, 1527
BsrGI TGTACA 4 cut(s) 968, 1795, 2334, 2628
BsrI ACTGG 4 cut(s) 637, 1014, 1193, 2371
BssAI RCCGGY 2 cut(s) 278, 1527
BssECI CCNNGG 5 cut(s) 21, 253, 1291, 1740, 1818
BssMI GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
BssNAI GTATAC 1 cut(s) 735
BssNI GRCGYC 2 cut(s) 192, 1525
BssSI CACGAG 2 cut(s) 1152, 1855
BssT1I CCWWGG 3 cut(s) 1291, 1740, 1818
Bst1107I GTATAC 1 cut(s) 735
Bst2BI CACGAG 2 cut(s) 1152, 1855
Bst2UI CCWGG 6 cut(s) 22, 1266, 2180, 2254, 2504, 2710
Bst4CI ACNGT 4 cut(s) 854, 1778, 2510, 2818
Bst6I CTCTTC 6 cut(s) 39, 107, 411, 1906, 2106, 2279
BstACI GRCGYC 2 cut(s) 192, 1525
BstAFI CTTAAG 1 cut(s) 584
BstAPI GCANNNNNTGC 1 cut(s) 2126
BstAUI TGTACA 4 cut(s) 968, 1795, 2334, 2628
BstBAI YACGTR 3 cut(s) 346, 1625, 2092
BstC8I GCNNGC 6 cut(s) 1453, 2127, 2144, 2417, 2638, 2745
BstDEI CTNAG 7 cut(s) 660, 758, 1178, 1321, 1358, 1413, 2301
BstEII GGTNACC 1 cut(s) 848
BstFNI CGCG 2 cut(s) 1106, 2640
BstHHI GCGC 2 cut(s) 1106, 2642
BstKTI GATC 7 cut(s) 166, 289, 397, 691, 1264, 1432, 2626
BstMAI GTCTC 4 cut(s) 203, 817, 1155, 2257
BstMBI GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
BstMCI CGRYCG 3 cut(s) 289, 316, 2782
BstMWI GCNNNNNNNGC 6 cut(s) 288, 312, 1670, 2126, 2286, 2784
BstNI CCWGG 6 cut(s) 22, 1266, 2180, 2254, 2504, 2710
BstNSI RCATGY 4 cut(s) 1116, 1371, 1733, 1995
BstPI GGTNACC 1 cut(s) 848
BstSCI CCNGG 7 cut(s) 20, 937, 1264, 2178, 2252, 2502, 2708
BstSLI GKGCMC 1 cut(s) 2350
BstSNI TACGTA 1 cut(s) 346
BstUI CGCG 2 cut(s) 1106, 2640
BstV1I GCAGC 9 cut(s) 1915, 1918, 2023, 2220, 2242, 2595, 2727, 2734, 2776
BstV2I GAAGAC 1 cut(s) 1642
BstX2I RGATCY 2 cut(s) 394, 1429
BstYI RGATCY 2 cut(s) 394, 1429
BstZ17I GTATAC 1 cut(s) 735
BstZI CGGCCG 2 cut(s) 313, 2779
Bsu15I ATCGAT 1 cut(s) 1950
Bsu36I CCTNAGG 1 cut(s) 1413
BsuI GTATCC 3 cut(s) 1319, 1807, 2081
BsuRI GGCC 5 cut(s) 315, 337, 1827, 2404, 2781
BsuTUI ATCGAT 1 cut(s) 1950
BtgZI GCGATG 3 cut(s) 681, 1473, 2396
BtrI CACGTC 1 cut(s) 827
BtsI GCAGTG 2 cut(s) 181, 2703
BtsIMutI CAGTG 6 cut(s) 181, 1021, 2348, 2378, 2703, 2814
BveI ACCTGC 1 cut(s) 548
Cac8I GCNNGC 6 cut(s) 1453, 2127, 2144, 2417, 2638, 2745
CciI TCATGA 1 cut(s) 1642
CciNI GCGGCCGC 1 cut(s) 313
CfoI GCGC 2 cut(s) 1106, 2642
Cfr10I RCCGGY 2 cut(s) 278, 1527
Cfr13I GGNCC 3 cut(s) 336, 460, 2830
ClaI ATCGAT 1 cut(s) 1950
CpoI CGGWCCG 1 cut(s) 460
CseI GACGC 2 cut(s) 220, 1533
CsiI ACCWGGT 1 cut(s) 2252
Csp6I GTAC 8 cut(s) 935, 969, 1559, 1733, 1796, 2151, 2335, 2629
CspI CGGWCCG 1 cut(s) 460
CviQI GTAC 8 cut(s) 935, 969, 1559, 1733, 1796, 2151, 2335, 2629
DdeI CTNAG 7 cut(s) 660, 758, 1178, 1321, 1358, 1413, 2301
DpnI GATC 7 cut(s) 165, 288, 396, 690, 1263, 1431, 2625
DpnII GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
DraI TTTAAA 1 cut(s) 15
DraIII CACNNNGTG 1 cut(s) 1628
DriI GACNNNNNGTC 1 cut(s) 2482
EaeI YGGCCR 3 cut(s) 313, 1825, 2779
EagI CGGCCG 2 cut(s) 313, 2779
Eam1104I CTCTTC 6 cut(s) 39, 107, 411, 1906, 2106, 2279
Eam1105I GACNNNNNGTC 1 cut(s) 2482
EarI CTCTTC 6 cut(s) 39, 107, 411, 1906, 2106, 2279
Ecl136II GAGCTC 2 cut(s) 306, 2636
EclXI CGGCCG 2 cut(s) 313, 2779
Eco105I TACGTA 1 cut(s) 346
Eco130I CCWWGG 3 cut(s) 1291, 1740, 1818
Eco24I GRGCYC 3 cut(s) 34, 308, 2638
Eco32I GATATC 1 cut(s) 1409
Eco47I GGWCC 2 cut(s) 460, 2830
Eco52I CGGCCG 2 cut(s) 313, 2779
Eco53kI GAGCTC 2 cut(s) 306, 2636
Eco57I CTGAAG 4 cut(s) 455, 1089, 1258, 1659
Eco72I CACGTG 1 cut(s) 1625
Eco81I CCTNAGG 1 cut(s) 1413
Eco91I GGTNACC 1 cut(s) 848
EcoICRI GAGCTC 2 cut(s) 306, 2636
EcoO109I RGGNCCY 1 cut(s) 2830
EcoO65I GGTNACC 1 cut(s) 848
EcoRI GAATTC 1 cut(s) 453
EcoRII CCWGG 6 cut(s) 20, 1264, 2178, 2252, 2502, 2708
EcoRV GATATC 1 cut(s) 1409
EcoT14I CCWWGG 3 cut(s) 1291, 1740, 1818
EcoT22I ATGCAT 1 cut(s) 1715
EcoT38I GRGCYC 3 cut(s) 34, 308, 2638
ErhI CCWWGG 3 cut(s) 1291, 1740, 1818
Esp3I CGTCTC 2 cut(s) 203, 817
FalI AAGNNNNNCTT 4 cut(s) 1601, 1633, 2109, 2141
FaqI GGGAC 3 cut(s) 973, 2486, 2816
FauI CCCGC 3 cut(s) 459, 2463, 2529
FbaI TGATCA 1 cut(s) 163
FblI GTMKAC 1 cut(s) 734
FriOI GRGCYC 3 cut(s) 34, 308, 2638
FspBI CTAG 6 cut(s) 359, 573, 609, 1050, 1146, 1670
GlaI GCGC 2 cut(s) 1105, 2641
GsaI CCCAGC 1 cut(s) 1389
GsuI CTGGAG 2 cut(s) 997, 2162
HaeIII GGCC 5 cut(s) 315, 337, 1827, 2404, 2781
HapII CCGG 9 cut(s) 279, 309, 334, 427, 458, 463, 939, 1513, 1528
HgaI GACGC 2 cut(s) 220, 1533
HhaI GCGC 2 cut(s) 1106, 2642
Hin1I GRCGYC 2 cut(s) 192, 1525
Hin6I GCGC 2 cut(s) 1104, 2640
HinP1I GCGC 2 cut(s) 1104, 2640
HindIII AAGCTT 2 cut(s) 587, 2417
HpaII CCGG 9 cut(s) 279, 309, 334, 427, 458, 463, 939, 1513, 1528
HphI GGTGA 9 cut(s) 115, 223, 268, 572, 2215, 2282, 2378, 2444, 2567
Hpy166II GTNNAC 9 cut(s) 735, 969, 1348, 1798, 2337, 2348, 2368, 2376, 2452
Hpy188III TCNNGA 7 cut(s) 161, 822, 857, 1302, 1412, 1643, 2262
Hpy8I GTNNAC 9 cut(s) 735, 969, 1348, 1798, 2337, 2348, 2368, 2376, 2452
Hpy99I CGWCG 4 cut(s) 194, 197, 1060, 1572
HpyAV CCTTC 6 cut(s) 968, 1064, 1081, 1673, 2302, 2801
HpyCH4III ACNGT 4 cut(s) 854, 1778, 2510, 2818
HpyCH4IV ACGT 8 cut(s) 192, 345, 721, 826, 1058, 1624, 1888, 2091
HpyF10VI GCNNNNNNNGC 6 cut(s) 288, 312, 1670, 2126, 2286, 2784
HpyF3I CTNAG 7 cut(s) 660, 758, 1178, 1321, 1358, 1413, 2301
HpySE526I ACGT 8 cut(s) 192, 345, 721, 826, 1058, 1624, 1888, 2091
Hsp92I GRCGYC 2 cut(s) 192, 1525
HspAI GCGC 2 cut(s) 1104, 2640
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
LguI GCTCTTC 2 cut(s) 39, 2279
LmnI GCTCC 4 cut(s) 311, 1242, 2049, 2181
Lsp1109I GCAGC 9 cut(s) 1915, 1918, 2023, 2220, 2242, 2595, 2727, 2734, 2776
LweI GCATC 3 cut(s) 1943, 2452, 2796
MabI ACCWGGT 1 cut(s) 2252
MaeI CTAG 6 cut(s) 359, 573, 609, 1050, 1146, 1670
MaeII ACGT 8 cut(s) 192, 345, 721, 826, 1058, 1624, 1888, 2091
MaeIII GTNAC 6 cut(s) 269, 827, 848, 1268, 2215, 2652
MalI GATC 7 cut(s) 165, 288, 396, 690, 1263, 1431, 2625
MboI GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
MfeI CAATTG 1 cut(s) 2058
MflI RGATCY 2 cut(s) 394, 1429
MhlI GDGCHC 7 cut(s) 34, 308, 1153, 2046, 2350, 2386, 2638
MlsI TGGCCA 1 cut(s) 1827
MluNI TGGCCA 1 cut(s) 1827
MlyI GAGTC 2 cut(s) 415, 955
MmeI TCCRAC 6 cut(s) 907, 1032, 1138, 1550, 1984, 2269
Mox20I TGGCCA 1 cut(s) 1827
Mph1103I ATGCAT 1 cut(s) 1715
MscI TGGCCA 1 cut(s) 1827
MseI TTAA 7 cut(s) 14, 444, 585, 591, 1758, 1785, 2184
MslI CAYNNNNRTG 2 cut(s) 1990, 2619
Msp20I TGGCCA 1 cut(s) 1827
MspA1I CMGCKG 2 cut(s) 2233, 2342
MspCI CTTAAG 1 cut(s) 584
MspI CCGG 9 cut(s) 279, 309, 334, 427, 458, 463, 939, 1513, 1528
MspR9I CCNGG 7 cut(s) 22, 939, 1266, 2180, 2254, 2504, 2710
MunI CAATTG 1 cut(s) 2058
Mva1269I GAATGC 1 cut(s) 2809
MvaI CCWGG 6 cut(s) 22, 1266, 2180, 2254, 2504, 2710
MvnI CGCG 2 cut(s) 1106, 2640
MwoI GCNNNNNNNGC 6 cut(s) 288, 312, 1670, 2126, 2286, 2784
NciI CCSGG 1 cut(s) 939
NdeII GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
NlaIV GGNNCC 5 cut(s) 227, 1289, 2177, 2590, 2832
NmuCI GTSAC 1 cut(s) 827
NotI GCGGCCGC 1 cut(s) 313
NsiI ATGCAT 1 cut(s) 1715
NspI RCATGY 4 cut(s) 1116, 1371, 1733, 1995
PagI TCATGA 1 cut(s) 1642
PaqCI CACCTGC 1 cut(s) 548
PciI ACATGT 1 cut(s) 1367
PciSI GCTCTTC 2 cut(s) 39, 2279
PctI GAATGC 1 cut(s) 2809
PflFI GACNNNGTC 1 cut(s) 2254
PflMI CCANNNNNTGG 1 cut(s) 2709
PfoI TCCNGGA 1 cut(s) 2502
Ple19I CGATCG 1 cut(s) 289
PleI GAGTC 2 cut(s) 415, 955
PmaCI CACGTG 1 cut(s) 1625
PmlI CACGTG 1 cut(s) 1625
PpsI GAGTC 2 cut(s) 415, 955
Ppu21I YACGTR 3 cut(s) 346, 1625, 2092
PpuMI RGGWCCY 1 cut(s) 2830
PscI ACATGT 1 cut(s) 1367
Psp124BI GAGCTC 2 cut(s) 308, 2638
Psp5II RGGWCCY 1 cut(s) 2830
Psp6I CCWGG 6 cut(s) 20, 1264, 2178, 2252, 2502, 2708
PspCI CACGTG 1 cut(s) 1625
PspEI GGTNACC 1 cut(s) 848
PspFI CCCAGC 1 cut(s) 1385
PspGI CCWGG 6 cut(s) 20, 1264, 2178, 2252, 2502, 2708
PspN4I GGNNCC 5 cut(s) 227, 1289, 2177, 2590, 2832
PspPI GGNCC 3 cut(s) 336, 460, 2830
PspPPI RGGWCCY 1 cut(s) 2830
PsuI RGATCY 2 cut(s) 394, 1429
PsyI GACNNNGTC 1 cut(s) 2254
PvuI CGATCG 1 cut(s) 289
PvuII CAGCTG 2 cut(s) 2233, 2342
RgaI GCGATCGC 1 cut(s) 289
RsaI GTAC 8 cut(s) 936, 970, 1560, 1734, 1797, 2152, 2336, 2630
RsaNI GTAC 8 cut(s) 935, 969, 1559, 1733, 1796, 2151, 2335, 2629
RseI CAYNNNNRTG 2 cut(s) 1990, 2619
Rsr2I CGGWCCG 1 cut(s) 460
RsrII CGGWCCG 1 cut(s) 460
SacI GAGCTC 2 cut(s) 308, 2638
SapI GCTCTTC 2 cut(s) 39, 2279
SaqAI TTAA 7 cut(s) 14, 444, 585, 591, 1758, 1785, 2184
Sau3AI GATC 7 cut(s) 163, 286, 394, 688, 1261, 1429, 2623
Sau96I GGNCC 3 cut(s) 336, 460, 2830
ScaI AGTACT 1 cut(s) 2152
SchI GAGTC 2 cut(s) 415, 955
ScrFI CCNGG 7 cut(s) 22, 939, 1266, 2180, 2254, 2504, 2710
SduI GDGCHC 7 cut(s) 34, 308, 1153, 2046, 2350, 2386, 2638
SexAI ACCWGGT 1 cut(s) 2252
SfaAI GCGATCGC 1 cut(s) 289
SfaNI GCATC 3 cut(s) 1943, 2452, 2796
SgfI GCGATCGC 1 cut(s) 289
SgrAI CRCCGGYG 1 cut(s) 278
SinI GGWCC 2 cut(s) 460, 2830
SmiMI CAYNNNNRTG 2 cut(s) 1990, 2619
SmlI CTYRAG 4 cut(s) 584, 857, 1183, 2480
SmoI CTYRAG 4 cut(s) 584, 857, 1183, 2480
SnaBI TACGTA 1 cut(s) 346
SspI AATATT 3 cut(s) 1340, 2529, 2802
SspMI CTAG 6 cut(s) 359, 573, 609, 1050, 1146, 1670
SstI GAGCTC 2 cut(s) 308, 2638
StyD4I CCNGG 7 cut(s) 20, 937, 1264, 2178, 2252, 2502, 2708
StyI CCWWGG 3 cut(s) 1291, 1740, 1818
TaaI ACNGT 4 cut(s) 854, 1778, 2510, 2818
TaiI ACGT 8 cut(s) 195, 348, 724, 829, 1061, 1627, 1891, 2094
TaqI TCGA 7 cut(s) 352, 419, 821, 1754, 1904, 1950, 2261
TatI WGTACW 5 cut(s) 968, 1795, 2150, 2334, 2628
TauI GCSGC 4 cut(s) 285, 315, 318, 2781
Tru1I TTAA 7 cut(s) 14, 444, 585, 591, 1758, 1785, 2184
Tru9I TTAA 7 cut(s) 14, 444, 585, 591, 1758, 1785, 2184
TscAI CASTG 6 cut(s) 188, 1021, 2355, 2378, 2710, 2821
TseFI GTSAC 1 cut(s) 827
TseI GCWGC 9 cut(s) 1928, 1931, 2011, 2230, 2233, 2608, 2740, 2747, 2764
Tsp45I GTSAC 1 cut(s) 827
TspRI CASTG 6 cut(s) 188, 1021, 2355, 2378, 2710, 2821
Tth111I GACNNNGTC 1 cut(s) 2254
Van91I CCANNNNNTGG 1 cut(s) 2709
Vha464I CTTAAG 1 cut(s) 584
VneI GTGCAC 1 cut(s) 2346
VpaK11BI GGWCC 2 cut(s) 460, 2830
XapI RAATTY 7 cut(s) 369, 453, 808, 1126, 1236, 1436, 1750
XceI RCATGY 4 cut(s) 1116, 1371, 1733, 1995
XmiI GTMKAC 1 cut(s) 734
XspI CTAG 6 cut(s) 359, 573, 609, 1050, 1146, 1670
ZraI GACGTC 1 cut(s) 193
ZrmI AGTACT 1 cut(s) 2152
Zsp2I ATGCAT 1 cut(s) 1715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.