Rh5DG060000

Protein of unknown function (DUF2921)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
5064942 .. 5067410
2469 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG060000.1

Sequence Viewer

Length: 2469 bp
ATGGATCTTCAATCTCTTCTGGGCTATTCGACTCGCCGGAATCTGAAGTTGGTTAAGCCCAGAATTCCGGTCCGGCGGGGCGTAGTGAGGTTTAGGCTTGATGGGTATTATTCAGAATCGTCAAAGAAGCTGTGTATGATTGGGAAAGTTATGTCCATGTATAATGCAGGTGAGTTTGAGGCTAGTGTTGTTCTTAAGCTTAATTATCCGAAATGGTCTAGTGTTTATGATAGTTTGATTACTGGGAGTTTAGAGAGCGTTGTTATTGCTGAGGGCGATGATGGTAAGAATTATTTTGATCCCGTTTTGATGTTGGGTTTGTCTGTGAAACGTAGTTATGAGTATACATTTGTTGGGAAAGATAGGCTGAGTAGTTTTCCGAGTAGTGTTTATAGAGGAGAGAGTATAGCTTTGGAGAATTTGAATGATTCGAGACGTGACTTGTGTAGGTTGCTTGGTAACCGTCTTGAGAGATATGAATTGGTGTATGGGAGTGAGTGTGGGGCTGTGAATTGCAATCCTCTTGGTGGGGATGTTGGATATGTACCCGGCTCGTTGGTTTTTTATGGGACTCGGTGTACAGAAGGGAGGAAAGTGCAGATGTTGTTGGGGTTTTCCAACTCCAGTGTAGATGAGTACATAAGATTTCCATTTGTGCCTAGCACGACGTTCATTGCTGAAGGGGAATGGGATGAGAAGGGGAATCGTCTATGCGCGGTTGCATGTAGGATTTTGAATTTTACAGAATCTTTGGCTAGTGCTCGTGTTGGAGACTGCTCAACTAAACTCAGCTTGAGATTTCCAGTAAAGTTGTCTTTACAAAATAGGTCTGCTGTTGTGGGGCAAATTTGGAGCGACAAAAAAGTGAGTGATCCTGGTTACTTCAGTAAAATTGGGTTCCAAGGTTTGTCGGGATGGTTAGTGAAACTCTTAGGATACAAATATGAATATTCTGTGAACGACAACCTGAGAAAAACATGTGCCGAAAAGAGGGCTGGGAGAGGGAAAGGAAAGCGATATCCTGAGGAGTATTCATCAGATCTGAAATTTGACATGAGAGCGAGCAACAGCAAAGGACAAGTTGCATGGGGTTATTCATCGCCATTATTTGTTGATGATGACCGGATTTATGGACGCCGGTTTTGGGATAAACCACAGGAAACAGAAGTACCAAGTCGTCGGAAGAAAAGCCATAGCAGTCCGATGAACATTACCTATAAGTTGAGCTTCACACGTGGTGTTCAATTTTTTCATGATGTCTTCCCATCTAAAGCAGAACTAGCTTCAGAAGGAATATATGATAGAGATTATGGAAACCTATGCATGATAGGATGTAGGCATGTACCATCCAAGGAACAAAATTCGATTAAAAAGGATATGTTAGACTGTTCTGTTAAAATTGATGTACACTTTCCTCCATTGGATACCAAGGATGGCCAGAATGTCAAGGGAACTATTGAAAGCACGAGGAATAAGTCAGACCCTCTTTATTTTGAACGTATTGACTTCTCTTCGACTTCAATTTACCATAACCAAGCTGCTGCATCCATTACGAGAATCGATTTTGAGATTGTTATGGTTTTGATTTCCAATACACTTGCATGTGCTTTTGTCGGATGGCAGCTCTATTTTGTGAAGAAAAACCCAGATGTGCTCCCATTCACTTCAATTGTCATGCTCATTGTTCTTACTCTGGGATACGTGATTCCTCTTCTGTTCAACTTTGAAGCAATGCTTGCACCAAACCAAAGCAAGCAGAGTACTTTTCTTGGGATTGGTGGATGGCTCCAGGTTAATGAAGTAATGGTCAGGGTGATAATGTTGGTAACTTTCATTTTGCAGCTGCTTCTTCTCCAACTGACCTGGTCATCGAGACAAGGTGATAATAGCCAGAAGAGCTTGATGGATTCTGAGAGGAAGGTTCTTTATGCCACCTTACTATTGTACACAGCTGGTGCACTGATTACTTGCTCTGTCCACCAGTGGACGAGTACTCACCAGAACTCATACAGGCCATTTCATCGCAAGCTTCGGCGAGTGGCTAACCTATGGCATCTTGTTCACCCGCAACGCTCTCTCTGGGACGACCTCAAGTCTTATGCTGGATTCATCCTGGACGGTTTTCTACTCCCGCAAATATTGTTCAACTTATTCGTCAATTCAGGTGAAAAGGCTCTGTCCTGTGCCTTTTACTTTGGAACCACCATGATTCGTCTGCTGCCTCATGCTTATGATCTGTACAGAGCTCGCGCTTACACATGGTTACTTGCTTTCTCATATATTTATGCAAACCCCAGAACCGATTTTTTCTCCACTGCCTGGAACATAATCATACCCTGTTGTTGTCTGCTGCTTGCTGCCATTATTTTCTTGCAGCAAAGGTTTGGCGGCCGTTGCATCCTTCCCAAAATATTTGGGCATTCCACTGTATATGAAAAGGTCCCTGTCATCAGCAATGAGGAATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

822

Amino Acids

93.45

Weight (kDa)

9.15

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 22 - 102 1.4e-10 DUF2921 lipocalin-like domain
DUF2921_N PF25333 165 - 298 1.4e-30 DUF2921 lipocalin-like domain
DUF2921_N PF25333 329 - 502 1.7e-32 DUF2921 lipocalin-like domain
DUF2921 PF11145 513 - 805 3.3e-59 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 158
Acc36I ACCTGC 1 cut(s) 158
AccB7I CCANNNNNTGG 1 cut(s) 2319
AccI GTMKAC 1 cut(s) 344
AccII CGCG 2 cut(s) 716, 2250
AciI CCGC 5 cut(s) 76, 716, 2066, 2132, 2388
AclWI GGATC 3 cut(s) 12, 293, 866
AcoI YGGCCR 2 cut(s) 1435, 2389
AcsI RAATTY 6 cut(s) 63, 418, 736, 846, 1046, 1360
AcuI CTGAAG 4 cut(s) 65, 699, 868, 1269
AcvI CACGTG 1 cut(s) 1235
AcyI GRCGYC 1 cut(s) 1135
AdeI CACNNNGTG 1 cut(s) 1238
AfiI CCNNNNNNNGG 4 cut(s) 527, 990, 1144, 2319
AflII CTTAAG 1 cut(s) 194
AflIII ACRYGT 2 cut(s) 977, 1232
AhdI GACNNNNNGTC 1 cut(s) 2092
AjiI CACGTC 1 cut(s) 437
AjnI CCWGG 5 cut(s) 874, 1788, 1862, 2112, 2318
AjuI GAANNNNNNNTTGG 2 cut(s) 32, 64
Alw21I GWGCWC 4 cut(s) 763, 1656, 1960, 2248
Alw26I GTCTC 3 cut(s) 427, 765, 1867
Alw44I GTGCAC 1 cut(s) 1956
AlwI GGATC 3 cut(s) 12, 293, 866
AoxI GGCC 3 cut(s) 1435, 2012, 2389
ApaLI GTGCAC 1 cut(s) 1956
ApeKI GCWGC 9 cut(s) 1538, 1541, 1621, 1840, 1843, 2218, 2350, 2357, 2374
ApoI RAATTY 6 cut(s) 63, 418, 736, 846, 1046, 1360
ArsI GACNNNNNNTTYG 2 cut(s) 1125, 1157
AspLEI GCGC 2 cut(s) 716, 2252
AspS9I GGNCC 2 cut(s) 70, 2440
AsuC2I CCSGG 1 cut(s) 549
AsuHPI GGTGA 6 cut(s) 182, 1825, 1892, 1988, 2054, 2177
AvaII GGWCC 2 cut(s) 70, 2440
AxyI CCTNAGG 1 cut(s) 1023
BaeGI GKGCMC 1 cut(s) 1960
BaeI ACNNNNGTAYC 2 cut(s) 1152, 1185
BalI TGGCCA 1 cut(s) 1437
BanII GRGCYC 1 cut(s) 2248
BauI CACGAG 2 cut(s) 762, 1465
BbrPI CACGTG 1 cut(s) 1235
BbsI GAAGAC 1 cut(s) 1252
Bbv12I GWGCWC 4 cut(s) 763, 1656, 1960, 2248
BbvCI CCTCAGC 1 cut(s) 270
BbvI GCAGC 9 cut(s) 1525, 1528, 1633, 1830, 1852, 2205, 2337, 2344, 2386
BccI CCATC 9 cut(s) 95, 275, 909, 1273, 1354, 1427, 1611, 1776, 1897
BceAI ACGGC 1 cut(s) 2376
BciT130I CCWGG 5 cut(s) 876, 1790, 1864, 2114, 2320
BciVI GTATCC 3 cut(s) 929, 1417, 1691
BcnI CCSGG 1 cut(s) 549
BcoDI GTCTC 3 cut(s) 427, 765, 1867
BfaI CTAG 5 cut(s) 183, 219, 660, 756, 1280
BfrI CTTAAG 1 cut(s) 194
BfuAI ACCTGC 1 cut(s) 158
BfuI GTATCC 3 cut(s) 929, 1417, 1691
BglII AGATCT 1 cut(s) 1039
BmcAI AGTACT 2 cut(s) 1762, 1993
Bme1390I CCNGG 6 cut(s) 549, 876, 1790, 1864, 2114, 2320
Bme18I GGWCC 2 cut(s) 70, 2440
BmeRI GACNNNNNGTC 1 cut(s) 2092
BmgBI CACGTC 1 cut(s) 437
BmgT120I GGNCC 2 cut(s) 70, 2440
BmiI GGNNCC 4 cut(s) 899, 1787, 2200, 2442
BmrFI CCNGG 6 cut(s) 549, 876, 1790, 1864, 2114, 2320
BmrI ACTGGG 1 cut(s) 252
BmsI GCATC 3 cut(s) 1553, 2062, 2406
BmuI ACTGGG 1 cut(s) 252
BpiI GAAGAC 1 cut(s) 1252
BpmI CTGGAG 2 cut(s) 607, 1772
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 3 cut(s) 488, 814, 2075
BpuMI CCSGG 1 cut(s) 549
Bsa29I ATCGAT 1 cut(s) 1560
BsaAI YACGTR 2 cut(s) 1235, 1702
BsaHI GRCGYC 1 cut(s) 1135
BsaJI CCNNGG 3 cut(s) 901, 1350, 1428
BsaWI WCCGGW 2 cut(s) 67, 1122
BsaXI ACNNNNNCTCC 2 cut(s) 484, 514
Bsc4I CCNNNNNNNGG 4 cut(s) 527, 990, 1144, 2319
Bse118I RCCGGY 1 cut(s) 1137
Bse1I ACTGG 4 cut(s) 247, 624, 803, 1981
Bse21I CCTNAGG 1 cut(s) 1023
Bse3DI GCAATG 3 cut(s) 672, 1737, 2461
BseBI CCWGG 5 cut(s) 876, 1790, 1864, 2114, 2320
BseCI ATCGAT 1 cut(s) 1560
BseDI CCNNGG 3 cut(s) 901, 1350, 1428
BseLI CCNNNNNNNGG 4 cut(s) 527, 990, 1144, 2319
BseMI GCAATG 3 cut(s) 672, 1737, 2461
BseMII CTCAG 6 cut(s) 261, 359, 802, 959, 1014, 1902
BseNI ACTGG 4 cut(s) 247, 624, 803, 1981
BseRI GAGGAG 2 cut(s) 411, 1040
BseSI GKGCMC 1 cut(s) 1960
BseX3I CGGCCG 1 cut(s) 2389
BseXI GCAGC 9 cut(s) 1525, 1528, 1633, 1830, 1852, 2205, 2337, 2344, 2386
BseYI CCCAGC 1 cut(s) 995
BsgI GTGCAG 1 cut(s) 617
Bsh1236I CGCG 2 cut(s) 716, 2250
Bsh1285I CGRYCG 1 cut(s) 2392
BshFI GGCC 3 cut(s) 1437, 2014, 2391
BshVI ATCGAT 1 cut(s) 1560
BsiEI CGRYCG 1 cut(s) 2392
BsiHKAI GWGCWC 4 cut(s) 763, 1656, 1960, 2248
BsiSI CCGG 6 cut(s) 37, 68, 73, 549, 1123, 1138
BslFI GGGAC 3 cut(s) 583, 2096, 2426
BslI CCNNNNNNNGG 4 cut(s) 527, 990, 1144, 2319
BsmAI GTCTC 3 cut(s) 427, 765, 1867
BsmBI CGTCTC 1 cut(s) 427
BsmFI GGGAC 3 cut(s) 583, 2096, 2426
BsmI GAATGC 1 cut(s) 2419
BsnI GGCC 3 cut(s) 1437, 2014, 2391
Bsp1286I GDGCHC 4 cut(s) 763, 1656, 1960, 2248
Bsp1407I TGTACA 4 cut(s) 578, 1405, 1944, 2238
Bsp143I GATC 5 cut(s) 4, 298, 871, 1039, 2233
BspACI CCGC 5 cut(s) 76, 716, 2066, 2132, 2388
BspANI GGCC 3 cut(s) 1437, 2014, 2391
BspCNI CTCAG 6 cut(s) 262, 360, 801, 960, 1015, 1903
BspDI ATCGAT 1 cut(s) 1560
BspFNI CGCG 2 cut(s) 716, 2250
BspHI TCATGA 1 cut(s) 1252
BspLI GGNNCC 4 cut(s) 899, 1787, 2200, 2442
BspMI ACCTGC 1 cut(s) 158
BspPI GGATC 3 cut(s) 12, 293, 866
BspQI GCTCTTC 1 cut(s) 1889
BspTI CTTAAG 1 cut(s) 194
BsrDI GCAATG 3 cut(s) 672, 1737, 2461
BsrFI RCCGGY 1 cut(s) 1137
BsrGI TGTACA 4 cut(s) 578, 1405, 1944, 2238
BsrI ACTGG 4 cut(s) 247, 624, 803, 1981
BssAI RCCGGY 1 cut(s) 1137
BssECI CCNNGG 3 cut(s) 901, 1350, 1428
BssMI GATC 5 cut(s) 4, 298, 871, 1039, 2233
BssNAI GTATAC 1 cut(s) 345
BssNI GRCGYC 1 cut(s) 1135
BssSI CACGAG 2 cut(s) 762, 1465
BssT1I CCWWGG 3 cut(s) 901, 1350, 1428
Bst1107I GTATAC 1 cut(s) 345
Bst2BI CACGAG 2 cut(s) 762, 1465
Bst2UI CCWGG 5 cut(s) 876, 1790, 1864, 2114, 2320
Bst4CI ACNGT 4 cut(s) 464, 1388, 2120, 2428
Bst6I CTCTTC 4 cut(s) 21, 1516, 1716, 1889
BstACI GRCGYC 1 cut(s) 1135
BstAFI CTTAAG 1 cut(s) 194
BstAPI GCANNNNNTGC 1 cut(s) 1736
BstAUI TGTACA 4 cut(s) 578, 1405, 1944, 2238
BstBAI YACGTR 2 cut(s) 1235, 1702
BstC8I GCNNGC 6 cut(s) 1063, 1737, 1754, 2027, 2248, 2355
BstDEI CTNAG 7 cut(s) 270, 368, 788, 931, 968, 1023, 1911
BstEII GGTNACC 1 cut(s) 458
BstFNI CGCG 2 cut(s) 716, 2250
BstHHI GCGC 2 cut(s) 716, 2252
BstKTI GATC 5 cut(s) 7, 301, 874, 1042, 2236
BstMAI GTCTC 3 cut(s) 427, 765, 1867
BstMBI GATC 5 cut(s) 4, 298, 871, 1039, 2233
BstMCI CGRYCG 1 cut(s) 2392
BstMWI GCNNNNNNNGC 4 cut(s) 1280, 1736, 1896, 2394
BstNI CCWGG 5 cut(s) 876, 1790, 1864, 2114, 2320
BstNSI RCATGY 4 cut(s) 726, 981, 1343, 1605
BstPI GGTNACC 1 cut(s) 458
BstSCI CCNGG 6 cut(s) 547, 874, 1788, 1862, 2112, 2318
BstSLI GKGCMC 1 cut(s) 1960
BstUI CGCG 2 cut(s) 716, 2250
BstV1I GCAGC 9 cut(s) 1525, 1528, 1633, 1830, 1852, 2205, 2337, 2344, 2386
BstV2I GAAGAC 1 cut(s) 1252
BstX2I RGATCY 2 cut(s) 4, 1039
BstYI RGATCY 2 cut(s) 4, 1039
BstZ17I GTATAC 1 cut(s) 345
BstZI CGGCCG 1 cut(s) 2389
Bsu15I ATCGAT 1 cut(s) 1560
Bsu36I CCTNAGG 1 cut(s) 1023
BsuI GTATCC 3 cut(s) 929, 1417, 1691
BsuRI GGCC 3 cut(s) 1437, 2014, 2391
BsuTUI ATCGAT 1 cut(s) 1560
BtgZI GCGATG 3 cut(s) 291, 1083, 2006
BtrI CACGTC 1 cut(s) 437
BtsI GCAGTG 1 cut(s) 2313
BtsIMutI CAGTG 5 cut(s) 631, 1958, 1988, 2313, 2424
BveI ACCTGC 1 cut(s) 158
Cac8I GCNNGC 6 cut(s) 1063, 1737, 1754, 2027, 2248, 2355
CciI TCATGA 1 cut(s) 1252
CfoI GCGC 2 cut(s) 716, 2252
Cfr10I RCCGGY 1 cut(s) 1137
Cfr13I GGNCC 2 cut(s) 70, 2440
ClaI ATCGAT 1 cut(s) 1560
CpoI CGGWCCG 1 cut(s) 70
CseI GACGC 1 cut(s) 1143
CsiI ACCWGGT 1 cut(s) 1862
CspI CGGWCCG 1 cut(s) 70
DdeI CTNAG 7 cut(s) 270, 368, 788, 931, 968, 1023, 1911
DpnI GATC 5 cut(s) 6, 300, 873, 1041, 2235
DpnII GATC 5 cut(s) 4, 298, 871, 1039, 2233
DraIII CACNNNGTG 1 cut(s) 1238
DriI GACNNNNNGTC 1 cut(s) 2092
EaeI YGGCCR 2 cut(s) 1435, 2389
EagI CGGCCG 1 cut(s) 2389
Eam1104I CTCTTC 4 cut(s) 21, 1516, 1716, 1889
Eam1105I GACNNNNNGTC 1 cut(s) 2092
EarI CTCTTC 4 cut(s) 21, 1516, 1716, 1889
Ecl136II GAGCTC 1 cut(s) 2246
EclXI CGGCCG 1 cut(s) 2389
Eco130I CCWWGG 3 cut(s) 901, 1350, 1428
Eco24I GRGCYC 1 cut(s) 2248
Eco32I GATATC 1 cut(s) 1019
Eco47I GGWCC 2 cut(s) 70, 2440
Eco52I CGGCCG 1 cut(s) 2389
Eco53kI GAGCTC 1 cut(s) 2246
Eco57I CTGAAG 4 cut(s) 65, 699, 868, 1269
Eco72I CACGTG 1 cut(s) 1235
Eco81I CCTNAGG 1 cut(s) 1023
Eco91I GGTNACC 1 cut(s) 458
EcoICRI GAGCTC 1 cut(s) 2246
EcoO109I RGGNCCY 1 cut(s) 2440
EcoO65I GGTNACC 1 cut(s) 458
EcoRI GAATTC 1 cut(s) 63
EcoRII CCWGG 5 cut(s) 874, 1788, 1862, 2112, 2318
EcoRV GATATC 1 cut(s) 1019
EcoT14I CCWWGG 3 cut(s) 901, 1350, 1428
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 1 cut(s) 2248
ErhI CCWWGG 3 cut(s) 901, 1350, 1428
Esp3I CGTCTC 1 cut(s) 427
FalI AAGNNNNNCTT 4 cut(s) 1211, 1243, 1719, 1751
FaqI GGGAC 3 cut(s) 583, 2096, 2426
FauI CCCGC 3 cut(s) 69, 2073, 2139
FblI GTMKAC 1 cut(s) 344
FriOI GRGCYC 1 cut(s) 2248
FspBI CTAG 5 cut(s) 183, 219, 660, 756, 1280
GlaI GCGC 2 cut(s) 715, 2251
GsaI CCCAGC 1 cut(s) 999
GsuI CTGGAG 2 cut(s) 607, 1772
HaeIII GGCC 3 cut(s) 1437, 2014, 2391
HapII CCGG 6 cut(s) 37, 68, 73, 549, 1123, 1138
HgaI GACGC 1 cut(s) 1143
HhaI GCGC 2 cut(s) 716, 2252
Hin1I GRCGYC 1 cut(s) 1135
Hin6I GCGC 2 cut(s) 714, 2250
HinP1I GCGC 2 cut(s) 714, 2250
HindIII AAGCTT 2 cut(s) 197, 2027
HpaII CCGG 6 cut(s) 37, 68, 73, 549, 1123, 1138
HphI GGTGA 6 cut(s) 182, 1825, 1892, 1988, 2054, 2177
Hpy166II GTNNAC 9 cut(s) 345, 579, 958, 1408, 1947, 1958, 1978, 1986, 2062
Hpy188III TCNNGA 6 cut(s) 432, 467, 912, 1022, 1253, 1872
Hpy8I GTNNAC 9 cut(s) 345, 579, 958, 1408, 1947, 1958, 1978, 1986, 2062
Hpy99I CGWCG 2 cut(s) 670, 1182
HpyAV CCTTC 6 cut(s) 578, 674, 691, 1283, 1912, 2411
HpyCH4III ACNGT 4 cut(s) 464, 1388, 2120, 2428
HpyCH4IV ACGT 6 cut(s) 331, 436, 668, 1234, 1498, 1701
HpyF10VI GCNNNNNNNGC 4 cut(s) 1280, 1736, 1896, 2394
HpyF3I CTNAG 7 cut(s) 270, 368, 788, 931, 968, 1023, 1911
HpySE526I ACGT 6 cut(s) 331, 436, 668, 1234, 1498, 1701
Hsp92I GRCGYC 1 cut(s) 1135
HspAI GCGC 2 cut(s) 714, 2250
Kzo9I GATC 5 cut(s) 4, 298, 871, 1039, 2233
LguI GCTCTTC 1 cut(s) 1889
LmnI GCTCC 3 cut(s) 852, 1659, 1791
Lsp1109I GCAGC 9 cut(s) 1525, 1528, 1633, 1830, 1852, 2205, 2337, 2344, 2386
LweI GCATC 3 cut(s) 1553, 2062, 2406
MabI ACCWGGT 1 cut(s) 1862
MaeI CTAG 5 cut(s) 183, 219, 660, 756, 1280
MaeII ACGT 6 cut(s) 331, 436, 668, 1234, 1498, 1701
MaeIII GTNAC 5 cut(s) 437, 458, 878, 1825, 2262
MalI GATC 5 cut(s) 6, 300, 873, 1041, 2235
MboI GATC 5 cut(s) 4, 298, 871, 1039, 2233
MboII GAAGA 8 cut(s) 8, 1195, 1252, 1503, 1648, 1703, 1841, 1906
MfeI CAATTG 1 cut(s) 1668
MflI RGATCY 2 cut(s) 4, 1039
MhlI GDGCHC 4 cut(s) 763, 1656, 1960, 2248
MlsI TGGCCA 1 cut(s) 1437
MluNI TGGCCA 1 cut(s) 1437
MlyI GAGTC 2 cut(s) 25, 565
MmeI TCCRAC 6 cut(s) 517, 642, 748, 1160, 1594, 1879
Mox20I TGGCCA 1 cut(s) 1437
Mph1103I ATGCAT 1 cut(s) 1325
MscI TGGCCA 1 cut(s) 1437
MseI TTAA 6 cut(s) 54, 195, 201, 1368, 1395, 1794
MslI CAYNNNNRTG 2 cut(s) 1600, 2229
Msp20I TGGCCA 1 cut(s) 1437
MspA1I CMGCKG 2 cut(s) 1843, 1952
MspCI CTTAAG 1 cut(s) 194
MspI CCGG 6 cut(s) 37, 68, 73, 549, 1123, 1138
MspR9I CCNGG 6 cut(s) 549, 876, 1790, 1864, 2114, 2320
MunI CAATTG 1 cut(s) 1668
Mva1269I GAATGC 1 cut(s) 2419
MvaI CCWGG 5 cut(s) 876, 1790, 1864, 2114, 2320
MvnI CGCG 2 cut(s) 716, 2250
MwoI GCNNNNNNNGC 4 cut(s) 1280, 1736, 1896, 2394
NciI CCSGG 1 cut(s) 549
NdeII GATC 5 cut(s) 4, 298, 871, 1039, 2233
NlaIV GGNNCC 4 cut(s) 899, 1787, 2200, 2442
NmuCI GTSAC 1 cut(s) 437
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 4 cut(s) 726, 981, 1343, 1605
PagI TCATGA 1 cut(s) 1252
PaqCI CACCTGC 1 cut(s) 158
PciI ACATGT 1 cut(s) 977
PciSI GCTCTTC 1 cut(s) 1889
PctI GAATGC 1 cut(s) 2419
PflFI GACNNNGTC 1 cut(s) 1864
PflMI CCANNNNNTGG 1 cut(s) 2319
PfoI TCCNGGA 1 cut(s) 2112
PleI GAGTC 2 cut(s) 25, 565
PmaCI CACGTG 1 cut(s) 1235
PmlI CACGTG 1 cut(s) 1235
PpsI GAGTC 2 cut(s) 25, 565
Ppu21I YACGTR 2 cut(s) 1235, 1702
PpuMI RGGWCCY 1 cut(s) 2440
PscI ACATGT 1 cut(s) 977
Psp124BI GAGCTC 1 cut(s) 2248
Psp5II RGGWCCY 1 cut(s) 2440
Psp6I CCWGG 5 cut(s) 874, 1788, 1862, 2112, 2318
PspCI CACGTG 1 cut(s) 1235
PspEI GGTNACC 1 cut(s) 458
PspFI CCCAGC 1 cut(s) 995
PspGI CCWGG 5 cut(s) 874, 1788, 1862, 2112, 2318
PspN4I GGNNCC 4 cut(s) 899, 1787, 2200, 2442
PspPI GGNCC 2 cut(s) 70, 2440
PspPPI RGGWCCY 1 cut(s) 2440
PsuI RGATCY 2 cut(s) 4, 1039
PsyI GACNNNGTC 1 cut(s) 1864
PvuII CAGCTG 2 cut(s) 1843, 1952
RseI CAYNNNNRTG 2 cut(s) 1600, 2229
Rsr2I CGGWCCG 1 cut(s) 70
RsrII CGGWCCG 1 cut(s) 70
SacI GAGCTC 1 cut(s) 2248
SapI GCTCTTC 1 cut(s) 1889
SaqAI TTAA 6 cut(s) 54, 195, 201, 1368, 1395, 1794
Sau3AI GATC 5 cut(s) 4, 298, 871, 1039, 2233
Sau96I GGNCC 2 cut(s) 70, 2440
ScaI AGTACT 2 cut(s) 1762, 1993
SchI GAGTC 2 cut(s) 25, 565
ScrFI CCNGG 6 cut(s) 549, 876, 1790, 1864, 2114, 2320
SduI GDGCHC 4 cut(s) 763, 1656, 1960, 2248
SexAI ACCWGGT 1 cut(s) 1862
SfaNI GCATC 3 cut(s) 1553, 2062, 2406
SinI GGWCC 2 cut(s) 70, 2440
SmiMI CAYNNNNRTG 2 cut(s) 1600, 2229
SmlI CTYRAG 4 cut(s) 194, 467, 793, 2090
SmoI CTYRAG 4 cut(s) 194, 467, 793, 2090
SsiI CCGC 5 cut(s) 76, 716, 2066, 2132, 2388
SspI AATATT 3 cut(s) 950, 2139, 2412
SspMI CTAG 5 cut(s) 183, 219, 660, 756, 1280
SstI GAGCTC 1 cut(s) 2248
StyD4I CCNGG 6 cut(s) 547, 874, 1788, 1862, 2112, 2318
StyI CCWWGG 3 cut(s) 901, 1350, 1428
TaaI ACNGT 4 cut(s) 464, 1388, 2120, 2428
TaiI ACGT 6 cut(s) 334, 439, 671, 1237, 1501, 1704
TaqI TCGA 6 cut(s) 29, 431, 1364, 1514, 1560, 1871
TatI WGTACW 7 cut(s) 578, 636, 1405, 1760, 1944, 1991, 2238
TauI GCSGC 1 cut(s) 2391
Tru1I TTAA 6 cut(s) 54, 195, 201, 1368, 1395, 1794
Tru9I TTAA 6 cut(s) 54, 195, 201, 1368, 1395, 1794
TscAI CASTG 5 cut(s) 631, 1965, 1988, 2320, 2431
TseFI GTSAC 1 cut(s) 437
TseI GCWGC 9 cut(s) 1538, 1541, 1621, 1840, 1843, 2218, 2350, 2357, 2374
Tsp45I GTSAC 1 cut(s) 437
TspRI CASTG 5 cut(s) 631, 1965, 1988, 2320, 2431
Tth111I GACNNNGTC 1 cut(s) 1864
Van91I CCANNNNNTGG 1 cut(s) 2319
Vha464I CTTAAG 1 cut(s) 194
VneI GTGCAC 1 cut(s) 1956
VpaK11BI GGWCC 2 cut(s) 70, 2440
XapI RAATTY 6 cut(s) 63, 418, 736, 846, 1046, 1360
XceI RCATGY 4 cut(s) 726, 981, 1343, 1605
XmiI GTMKAC 1 cut(s) 344
XspI CTAG 5 cut(s) 183, 219, 660, 756, 1280
ZrmI AGTACT 2 cut(s) 1762, 1993
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.