Rh5BG236800

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000420
Physical Location & Seq
Reverse (-)
28259791 .. 28261701
1911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG236800.1

Sequence Viewer

Length: 1911 bp
ATGTCGTTGAATAATATTGAGTGTTTGGAGGATAGAAAAACATTGCGAGTTCTGGTAGATTTTGCAGCCAGTAGCATCAGTTACCAGAGGCCTTTCAATCCAACAACAACATTGGTTGCGGAAGGTTCATGGGATGCAAGGAAAAATCAGCTAAATGTTGTTGCTTGTCGGTTCGTGCATGCAAGGAATTCTTTTAGTCCTAGTCATGTGGGTGATTGTTCAACACGATTGACAATGGGATTTCCTTCAATATGGACAATTGGAAATTCTAGCTGCATTGTGGGGAAAATTTGGAGCAACAAATCCGTGACAGAGGCAGGTTACTTCGAAAACATCACATTTGACAGTGCTCAAAGTGATTCAGCTGTATTTCCAGGCCAGAGGTATGAGTATACCAAAATAGACAAAGCAACAAAGTTGTGCCCAAGAAAGAAGACTGATGCTGATGACAAGAACAACATTTATCCAAATCCTTTTTCTTATTACATGGGATTGGATATTACAGCCAACAGTTCTACAGGAGAAGTTGGATGGGGCTATTCTGTCCCTCTCTCTGTTGATAACAAATTCTTCCAACCGTATTGGTACTCTCTGGAAGATGGAACTGAAGAATACCTTGGAGCTCCTGTGAGTGCTCCTGTGAGCGATAGAAACAACAATAGCAACAGGTACAACATCAGCTACAGAATAAGCATTAAAGCAGTAGATGGGGTTAGGCTTCCCAGTGGAGTGTCCCAACTTAATTCATTATATGAGATGGGGATTTTTGCTGAAGGGATATATGATGGCAGAGATGGAAGCCTGTGTATGGTAGGTTGCCGATACTTGAGCTCAAACAGTCACCAACAGCCAACATATGATTCTGTAGACTGTGAGATTGTTGTCAATGTTCAGTTTCCTCCAACAAATCCAAACAGTACCTATTCGGGTTTTATCAAGGGAAGCATCGAAAGCACACGAGAAATGTCTGATCCTCTTCATTTTGAGGGATTGGATTTGACCTCAGCTGCTGGTAACATGATCGAAGCAAGCCAATCCATTTGGAGAATGGATGTGGAGATCATATTGGTTGTTATATCCAACACACTCGCTTGTGTTTTTGGGGCATTACAACTCTTTCATGTGAAACGGAATCCGGATGTGCTCCCATCCATTTCTATCTTGATGCTGTATATTCTTGCTCTTGGCTACATGATACCTCTTATGCTAAACTTTGATGCCTTGTTCACACAACATGGTAGCCAAACTGTGTTCCTTGGAAGTGGATGGCTTGAACTCAATGAAGTAATTGTAAGGGTAGTAACAATGGTAGGTTTCTTGCTGCAAATTCGTCTTCTGCAGATAACAATGTCAGCAAAATCAGCAAATGGAAACCAAAAGGAGCTCTGGGCAGTGGAGAAGCTGGCTCTCTTTGTGGCTTTACCAGTATATGTTGGAGGGTCCTTGGTTGCTTTGCTTCTGATGAACTGGAGGAGGAACGATATTGCTGTGATGGTTTCGAGTGGTCAAAAGCATCCCATTTTGGGTACTATTTTGAAATCTTGTGCTGGTTTGTTCTTGGATGCATTTTTGTTCCCTCAAATTCTTCTCAACATGTTCTCCAAATCAACGGAAAAGGCATTGTCAGTTTCGTTCTTCGTTGGAACAACTCTTGTTCGTGTGCTGCCACATGCATATGATCTTTACAGGGCTCATACCTCTGGTCACCAATTGAAAGATTCATACATTTATGCAAGCCCTGCAGCAGACTTTTACTCTACTGCTTGGAATGTCATTATTCCTTTTGGAGGTCTACTTTTTGCTGTGATAATCTACTTGCAGCAGCGCTTTGGGGGTTGCTGCATTCTTCCTCAGAAGTTCATAGAGTTGGGTGAATATGAGAAGGTGCCTATCCTTACTGAAGCGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

636

Amino Acids

70.59

Weight (kDa)

5.87

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 24 - 113 1.3e-22 DUF2921 lipocalin-like domain
DUF2921_N PF25333 139 - 331 6.5e-32 DUF2921 lipocalin-like domain
DUF2921 PF11145 343 - 620 7.8e-61 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 308
AccB1I GGYRCC 1 cut(s) 1885
AccI GTMKAC 3 cut(s) 392, 867, 1792
AccIII TCCGGA 1 cut(s) 1135
AciI CCGC 1 cut(s) 119
AclWI GGATC 1 cut(s) 965
AcsI RAATTY 6 cut(s) 187, 265, 288, 566, 1326, 1581
AcuI CTGAAG 2 cut(s) 627, 792
AfaI GTAC 4 cut(s) 587, 671, 919, 1528
AfeI AGCGCT 1 cut(s) 1826
AfiI CCNNNNNNNGG 3 cut(s) 808, 1523, 1787
AflIII ACRYGT 1 cut(s) 1593
AgsI TTSAA 7 cut(s) 10, 97, 222, 249, 1274, 1537, 1714
AjnI CCWGG 1 cut(s) 373
AjuI GAANNNNNNNTTGG 6 cut(s) 460, 492, 600, 632, 844, 876
AluBI AGCT 9 cut(s) 151, 273, 365, 623, 681, 831, 1007, 1384, 1402
AluI AGCT 9 cut(s) 151, 273, 365, 623, 681, 831, 1007, 1384, 1402
Alw21I GWGCWC 6 cut(s) 352, 625, 637, 833, 1146, 1386
AlwI GGATC 1 cut(s) 965
AlwNI CAGNNNCTG 1 cut(s) 1010
Aor13HI TCCGGA 1 cut(s) 1135
Aor51HI AGCGCT 1 cut(s) 1826
AoxI GGCC 2 cut(s) 89, 376
ApeKI GCWGC 9 cut(s) 65, 273, 1007, 1321, 1663, 1742, 1819, 1822, 1839
ApoI RAATTY 6 cut(s) 187, 265, 288, 566, 1326, 1581
AspLEI GCGC 1 cut(s) 1827
AspS9I GGNCC 1 cut(s) 1440
AsuHPI GGTGA 4 cut(s) 224, 833, 1697, 1883
AsuII TTCGAA 1 cut(s) 327
AvaII GGWCC 1 cut(s) 1440
BaeGI GKGCMC 1 cut(s) 425
BanI GGYRCC 1 cut(s) 1885
BanII GRGCYC 4 cut(s) 625, 833, 1386, 1693
BauI CACGAG 1 cut(s) 957
BbsI GAAGAC 2 cut(s) 440, 1325
Bbv12I GWGCWC 6 cut(s) 352, 625, 637, 833, 1146, 1386
BbvCI CCTCAGC 1 cut(s) 1003
BbvI GCAGC 9 cut(s) 77, 260, 994, 1308, 1650, 1754, 1826, 1831, 1834
BccI CCATC 9 cut(s) 525, 593, 701, 751, 779, 788, 1156, 1260, 1486
BciT130I CCWGG 1 cut(s) 375
BfaI CTAG 2 cut(s) 201, 270
BfmI CTRYAG 5 cut(s) 516, 682, 864, 1337, 1740
BfoI RGCGCY 1 cut(s) 1828
BfuAI ACCTGC 1 cut(s) 308
BisI GCNGC 9 cut(s) 66, 274, 1008, 1322, 1664, 1743, 1820, 1823, 1840
BlsI GCNGC 9 cut(s) 67, 275, 1009, 1323, 1665, 1744, 1821, 1824, 1841
Bme1390I CCNGG 1 cut(s) 375
Bme18I GGWCC 1 cut(s) 1440
BmgT120I GGNCC 1 cut(s) 1440
BmiI GGNNCC 2 cut(s) 1441, 1887
BmrFI CCNGG 1 cut(s) 375
BmrI ACTGGG 1 cut(s) 717
BmsI GCATC 8 cut(s) 84, 124, 430, 954, 1155, 1207, 1522, 1552
BmuI ACTGGG 1 cut(s) 717
BpiI GAAGAC 2 cut(s) 440, 1325
BpmI CTGGAG 1 cut(s) 1489
Bpu10I CCTNAGC 1 cut(s) 1003
Bpu14I TTCGAA 1 cut(s) 327
BpuEI CTTGAG 1 cut(s) 847
BsaJI CCNNGG 3 cut(s) 616, 1255, 1443
BsaWI WCCGGW 1 cut(s) 1135
BsaXI ACNNNNNCTCC 4 cut(s) 612, 642, 1583, 1613
Bsc4I CCNNNNNNNGG 3 cut(s) 808, 1523, 1787
Bse1I ACTGG 4 cut(s) 69, 723, 1424, 1472
Bse3DI GCAATG 1 cut(s) 41
BseAI TCCGGA 1 cut(s) 1135
BseBI CCWGG 1 cut(s) 375
BseDI CCNNGG 3 cut(s) 616, 1255, 1443
BseGI GGATG 8 cut(s) 139, 536, 1057, 1144, 1148, 1271, 1513, 1567
BseLI CCNNNNNNNGG 3 cut(s) 808, 1523, 1787
BseMI GCAATG 1 cut(s) 41
BseMII CTCAG 2 cut(s) 1017, 1865
BseNI ACTGG 4 cut(s) 69, 723, 1424, 1472
BseRI GAGGAG 1 cut(s) 1486
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 9 cut(s) 77, 260, 994, 1308, 1650, 1754, 1826, 1831, 1834
BshFI GGCC 2 cut(s) 91, 378
BshNI GGYRCC 1 cut(s) 1885
BsiHKAI GWGCWC 6 cut(s) 352, 625, 637, 833, 1146, 1386
BsiSI CCGG 1 cut(s) 1136
BslFI GGGAC 2 cut(s) 530, 718
BslI CCNNNNNNNGG 3 cut(s) 808, 1523, 1787
BsmFI GGGAC 2 cut(s) 530, 718
BsmI GAATGC 1 cut(s) 1842
BsnI GGCC 2 cut(s) 91, 378
Bsp119I TTCGAA 1 cut(s) 327
Bsp1286I GDGCHC 8 cut(s) 352, 425, 625, 637, 833, 1146, 1386, 1693
Bsp13I TCCGGA 1 cut(s) 1135
Bsp143I GATC 4 cut(s) 970, 1020, 1059, 1678
BspACI CCGC 1 cut(s) 119
BspANI GGCC 2 cut(s) 91, 378
BspCNI CTCAG 2 cut(s) 1016, 1864
BspEI TCCGGA 1 cut(s) 1135
BspLI GGNNCC 2 cut(s) 1441, 1887
BspMAI CTGCAG 2 cut(s) 1341, 1744
BspMI ACCTGC 1 cut(s) 308
BspPI GGATC 1 cut(s) 965
BspT104I TTCGAA 1 cut(s) 327
BspT107I GGYRCC 1 cut(s) 1885
BsrDI GCAATG 1 cut(s) 41
BsrI ACTGG 4 cut(s) 69, 723, 1424, 1472
BssECI CCNNGG 3 cut(s) 616, 1255, 1443
BssMI GATC 4 cut(s) 970, 1020, 1059, 1678
BssNAI GTATAC 1 cut(s) 393
BssSI CACGAG 1 cut(s) 957
BssT1I CCWWGG 3 cut(s) 616, 1255, 1443
Bst1107I GTATAC 1 cut(s) 393
Bst2BI CACGAG 1 cut(s) 957
Bst2UI CCWGG 1 cut(s) 375
Bst4CI ACNGT 7 cut(s) 347, 512, 579, 839, 872, 917, 1249
Bst6I CTCTTC 1 cut(s) 981
BstAPI GCANNNNNTGC 1 cut(s) 1739
BstBI TTCGAA 1 cut(s) 327
BstC8I GCNNGC 4 cut(s) 180, 1030, 1404, 1735
BstDEI CTNAG 2 cut(s) 1003, 1851
BstEII GGTNACC 1 cut(s) 1703
BstENI CCTNNNNNAGG 1 cut(s) 1785
BstF5I GGATG 8 cut(s) 139, 536, 1057, 1144, 1148, 1271, 1513, 1567
BstH2I RGCGCY 1 cut(s) 1828
BstHHI GCGC 1 cut(s) 1827
BstKTI GATC 4 cut(s) 973, 1023, 1062, 1681
BstMBI GATC 4 cut(s) 970, 1020, 1059, 1678
BstMWI GCNNNNNNNGC 3 cut(s) 951, 1361, 1739
BstNI CCWGG 1 cut(s) 375
BstNSI RCATGY 3 cut(s) 182, 1597, 1673
BstPI GGTNACC 1 cut(s) 1703
BstSCI CCNGG 1 cut(s) 373
BstSFI CTRYAG 5 cut(s) 516, 682, 864, 1337, 1740
BstSLI GKGCMC 1 cut(s) 425
BstV1I GCAGC 9 cut(s) 77, 260, 994, 1308, 1650, 1754, 1826, 1831, 1834
BstV2I GAAGAC 2 cut(s) 440, 1325
BstZ17I GTATAC 1 cut(s) 393
BsuRI GGCC 2 cut(s) 91, 378
BtsCI GGATG 8 cut(s) 139, 536, 1057, 1144, 1148, 1271, 1513, 1567
BtsI GCAGTG 1 cut(s) 1398
BtsIMutI CAGTG 3 cut(s) 352, 730, 1398
BveI ACCTGC 1 cut(s) 308
Cac8I GCNNGC 4 cut(s) 180, 1030, 1404, 1735
CaiI CAGNNNCTG 1 cut(s) 1010
CfoI GCGC 1 cut(s) 1827
Cfr13I GGNCC 1 cut(s) 1440
CseI GACGC 1 cut(s) 1893
Csp6I GTAC 4 cut(s) 586, 670, 918, 1527
CviQI GTAC 4 cut(s) 586, 670, 918, 1527
DdeI CTNAG 2 cut(s) 1003, 1851
DpnI GATC 4 cut(s) 972, 1022, 1061, 1680
DpnII GATC 4 cut(s) 970, 1020, 1059, 1678
Eam1104I CTCTTC 1 cut(s) 981
EarI CTCTTC 1 cut(s) 981
Ecl136II GAGCTC 3 cut(s) 623, 831, 1384
Eco130I CCWWGG 3 cut(s) 616, 1255, 1443
Eco147I AGGCCT 1 cut(s) 91
Eco24I GRGCYC 4 cut(s) 625, 833, 1386, 1693
Eco47I GGWCC 1 cut(s) 1440
Eco47III AGCGCT 1 cut(s) 1826
Eco53kI GAGCTC 3 cut(s) 623, 831, 1384
Eco57I CTGAAG 2 cut(s) 627, 792
Eco91I GGTNACC 1 cut(s) 1703
EcoICRI GAGCTC 3 cut(s) 623, 831, 1384
EcoNI CCTNNNNNAGG 1 cut(s) 1785
EcoO109I RGGNCCY 1 cut(s) 1440
EcoO65I GGTNACC 1 cut(s) 1703
EcoRI GAATTC 1 cut(s) 187
EcoRII CCWGG 1 cut(s) 373
EcoT14I CCWWGG 3 cut(s) 616, 1255, 1443
EcoT22I ATGCAT 2 cut(s) 1567, 1675
EcoT38I GRGCYC 4 cut(s) 625, 833, 1386, 1693
ErhI CCWWGG 3 cut(s) 616, 1255, 1443
FalI AAGNNNNNCTT 4 cut(s) 175, 207, 600, 632
FaqI GGGAC 2 cut(s) 530, 718
FauNDI CATATG 2 cut(s) 856, 1675
FblI GTMKAC 3 cut(s) 392, 867, 1792
Fnu4HI GCNGC 9 cut(s) 66, 274, 1008, 1322, 1664, 1743, 1820, 1823, 1840
FokI GGATG 8 cut(s) 146, 543, 1064, 1135, 1151, 1278, 1500, 1574
FriOI GRGCYC 4 cut(s) 625, 833, 1386, 1693
Fsp4HI GCNGC 9 cut(s) 66, 274, 1008, 1322, 1664, 1743, 1820, 1823, 1840
FspBI CTAG 2 cut(s) 201, 270
GlaI GCGC 1 cut(s) 1826
GluI GCNGC 9 cut(s) 66, 274, 1008, 1322, 1664, 1743, 1820, 1823, 1840
GsuI CTGGAG 1 cut(s) 1489
HaeII RGCGCY 1 cut(s) 1828
HaeIII GGCC 2 cut(s) 91, 378
HapII CCGG 1 cut(s) 1136
HgaI GACGC 1 cut(s) 1893
HhaI GCGC 1 cut(s) 1827
Hin6I GCGC 1 cut(s) 1825
HinP1I GCGC 1 cut(s) 1825
HinfI GANTC 4 cut(s) 359, 860, 1132, 1718
HpaII CCGG 1 cut(s) 1136
HphI GGTGA 4 cut(s) 224, 833, 1697, 1883
Hpy166II GTNNAC 4 cut(s) 393, 868, 1227, 1793
Hpy188I TCNGA 3 cut(s) 970, 1461, 1854
Hpy188III TCNNGA 3 cut(s) 593, 1136, 1162
Hpy8I GTNNAC 4 cut(s) 393, 868, 1227, 1793
HpyAV CCTTC 4 cut(s) 116, 255, 767, 1876
HpyCH4III ACNGT 7 cut(s) 347, 512, 579, 839, 872, 917, 1249
HpyF10VI GCNNNNNNNGC 3 cut(s) 951, 1361, 1739
HpyF3I CTNAG 2 cut(s) 1003, 1851
HspAI GCGC 1 cut(s) 1825
Kpn2I TCCGGA 1 cut(s) 1135
Kzo9I GATC 4 cut(s) 970, 1020, 1059, 1678
LmnI GCTCC 6 cut(s) 294, 620, 628, 640, 1149, 1381
Lsp1109I GCAGC 9 cut(s) 77, 260, 994, 1308, 1650, 1754, 1826, 1831, 1834
LweI GCATC 8 cut(s) 84, 124, 430, 954, 1155, 1207, 1522, 1552
MaeI CTAG 2 cut(s) 201, 270
MaeIII GTNAC 7 cut(s) 80, 307, 320, 839, 1013, 1300, 1703
MalI GATC 4 cut(s) 972, 1022, 1061, 1680
MboI GATC 4 cut(s) 970, 1020, 1059, 1678
MboII GAAGA 9 cut(s) 445, 562, 608, 620, 968, 1325, 1577, 1627, 1838
MfeI CAATTG 2 cut(s) 258, 1709
MhlI GDGCHC 8 cut(s) 352, 425, 625, 637, 833, 1146, 1386, 1693
MmeI TCCRAC 7 cut(s) 125, 508, 598, 926, 1104, 1414, 1621
Mph1103I ATGCAT 2 cut(s) 1567, 1675
MroI TCCGGA 1 cut(s) 1135
MseI TTAA 3 cut(s) 696, 741, 1909
MslI CAYNNNNRTG 2 cut(s) 210, 1674
MspA1I CMGCKG 2 cut(s) 365, 1007
MspI CCGG 1 cut(s) 1136
MspR9I CCNGG 1 cut(s) 375
MunI CAATTG 2 cut(s) 258, 1709
Mva1269I GAATGC 1 cut(s) 1842
MvaI CCWGG 1 cut(s) 375
MwoI GCNNNNNNNGC 3 cut(s) 951, 1361, 1739
NdeI CATATG 2 cut(s) 856, 1675
NdeII GATC 4 cut(s) 970, 1020, 1059, 1678
NlaIV GGNNCC 2 cut(s) 1441, 1887
NmuCI GTSAC 3 cut(s) 307, 839, 1703
NsiI ATGCAT 2 cut(s) 1567, 1675
NspI RCATGY 3 cut(s) 182, 1597, 1673
NspV TTCGAA 1 cut(s) 327
PaeI GCATGC 1 cut(s) 182
PceI AGGCCT 1 cut(s) 91
PciI ACATGT 1 cut(s) 1593
PctI GAATGC 1 cut(s) 1842
PfeI GAWTC 4 cut(s) 359, 860, 1132, 1718
PkrI GCNGC 9 cut(s) 67, 275, 1009, 1323, 1665, 1744, 1821, 1824, 1841
PpuMI RGGWCCY 1 cut(s) 1440
PscI ACATGT 1 cut(s) 1593
Psp124BI GAGCTC 3 cut(s) 625, 833, 1386
Psp5II RGGWCCY 1 cut(s) 1440
Psp6I CCWGG 1 cut(s) 373
PspEI GGTNACC 1 cut(s) 1703
PspGI CCWGG 1 cut(s) 373
PspN4I GGNNCC 2 cut(s) 1441, 1887
PspPI GGNCC 1 cut(s) 1440
PspPPI RGGWCCY 1 cut(s) 1440
PstI CTGCAG 2 cut(s) 1341, 1744
PstNI CAGNNNCTG 1 cut(s) 1010
PvuII CAGCTG 2 cut(s) 365, 1007
RsaI GTAC 4 cut(s) 587, 671, 919, 1528
RsaNI GTAC 4 cut(s) 586, 670, 918, 1527
RseI CAYNNNNRTG 2 cut(s) 210, 1674
SacI GAGCTC 3 cut(s) 625, 833, 1386
SaqAI TTAA 3 cut(s) 696, 741, 1909
SatI GCNGC 9 cut(s) 66, 274, 1008, 1322, 1664, 1743, 1820, 1823, 1840
Sau3AI GATC 4 cut(s) 970, 1020, 1059, 1678
Sau96I GGNCC 1 cut(s) 1440
ScrFI CCNGG 1 cut(s) 375
SduI GDGCHC 8 cut(s) 352, 425, 625, 637, 833, 1146, 1386, 1693
SfaNI GCATC 8 cut(s) 84, 124, 430, 954, 1155, 1207, 1522, 1552
SfcI CTRYAG 5 cut(s) 516, 682, 864, 1337, 1740
SfuI TTCGAA 1 cut(s) 327
SinI GGWCC 1 cut(s) 1440
SmiMI CAYNNNNRTG 2 cut(s) 210, 1674
SmlI CTYRAG 1 cut(s) 826
SmoI CTYRAG 1 cut(s) 826
SphI GCATGC 1 cut(s) 182
SseBI AGGCCT 1 cut(s) 91
SsiI CCGC 1 cut(s) 119
SspI AATATT 1 cut(s) 16
SspMI CTAG 2 cut(s) 201, 270
SstI GAGCTC 3 cut(s) 625, 833, 1386
StuI AGGCCT 1 cut(s) 91
StyD4I CCNGG 1 cut(s) 373
StyI CCWWGG 3 cut(s) 616, 1255, 1443
TaaI ACNGT 7 cut(s) 347, 512, 579, 839, 872, 917, 1249
TaqI TCGA 4 cut(s) 327, 948, 1023, 1499
TfiI GAWTC 4 cut(s) 359, 860, 1132, 1718
Tru1I TTAA 3 cut(s) 696, 741, 1909
Tru9I TTAA 3 cut(s) 696, 741, 1909
TscAI CASTG 3 cut(s) 352, 730, 1398
TseFI GTSAC 3 cut(s) 307, 839, 1703
TseI GCWGC 9 cut(s) 65, 273, 1007, 1321, 1663, 1742, 1819, 1822, 1839
Tsp45I GTSAC 3 cut(s) 307, 839, 1703
TspDTI ATGAA 8 cut(s) 117, 735, 968, 1109, 1296, 1478, 1710, 1849
TspGWI ACGGA 3 cut(s) 295, 1144, 1625
TspRI CASTG 3 cut(s) 352, 730, 1398
VpaK11BI GGWCC 1 cut(s) 1440
XagI CCTNNNNNAGG 1 cut(s) 1785
XapI RAATTY 6 cut(s) 187, 265, 288, 566, 1326, 1581
XceI RCATGY 3 cut(s) 182, 1597, 1673
XcmI CCANNNNNNNNNTGG 1 cut(s) 1045
XmiI GTMKAC 3 cut(s) 392, 867, 1792
XspI CTAG 2 cut(s) 201, 270
Zsp2I ATGCAT 2 cut(s) 1567, 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.