FvH4_3g20390

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000420
Physical Location & Seq
Reverse (-)
13429586 .. 13432417
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g20390.t1

Sequence Viewer

Length: 2832 bp
ATGACTGTCTTCAAGAAAAATTTGATTTTGTTCACTGTTTTAGTCACATTTTCGTTAGACTCAATTCCATTCTGTGCTTCAGCTGCTCTAGTCTCATTTGCAGATCATTGCACTTCATTTGCTGCTGACAACTCAACCCCACCAGGATATGCCGGAGTTAACTCCTCCGTTCATAGCCTTATAGGTTACTACCACACCTCTGATGGAAGAAAGCCGAGTAACATTCTTAGCCAGAGCTCAGTACATGGAGCAGAGGCACAAAACTCGATTGTGATCCGCTTCTGGTACAATGAAACAGCAGATGAACAAGGCTTGTTCAGGGTCCAAGGAAGTATTGAATTTCCAAAGGACACCAGTACATATTTCCTTGTTGAGAATTCCACAAGCAGCCGGCAAGCCACTGACATCGGATTGGAATCAGTTTCAAATGTACAAGATTCGACAAGCTTTAAGCTAAACGGGATATGGTCAGAAGCTTCTGGGAAGCTTTGTATGGTTAGATCAGGTTATCATTACTCGAGCATAGGTAATTTACTTGAACTACCTGCACTTCTTAAGCTCTACAATGTCAAGAATTCCAGTACTCTCACTAGTTTGATTACTGGAACCTTTGAGAGCTTGGTAGATGTTAATACTGATCCAAACTATTTTGTAACAATCTCTATGTCATTGCTTCCTTCCATGAACTACCAGTACAATTTTGCTTCAAATAAATCTCATGACAGTTCTTCTGATAGAAGTGATGCTCCTCCACGTTCTTTAAAAATAGGGAGATTTTGTGCTGTGATCTCAAATTTAGTACTACATCGCCATTATGAACTGAAATATCCAAGCCGTTGTTTGAATATAGATTTCCCAGAGAACTGCTCCCCTATTTCTGTGTCTTATTTGCCTGCTGGCGTGTCATTGAAGAATATTGAGTGTTTGGAGGATGAACAAAAGATGAGAGTTCTTGTAGATTTTTCAGGTAGCAACAAGTGGAATCAGAGGCCTTTCAATCCAAATGTAACCTTTGTTGGGGAAGGTTCATGGGACGCAACGAAAAATGAGGTAGTTGTTGTTGCTTGTCGATTCTTGAATGCAACTGATTCCTTGAATACTAGTTATTTGGGAGATTGTTCAGTAAGATTGAGCATCTGGTTCCCTGCAAAGTGGACAATAGGAAATACTAGCAGCATTCAGGGGCTAATTTGGAGCAACCAGACCGCTGCAGAGTCGGATTACTTTGAAAGCATCACATTTGAAAGTGGTCAGACTGATGTTCTAAGGTTTACACTTCCAGGACAGGAATATGAGTATACTTTAATAGACCAGGTAACAAAATTGTGTCAAAGAACAAAGACTGCTAATGAAAACAACCGCTACATCTACCCACCTCCATTTTCTGTTTCCATGAGATTCCATCACTCAGTTGTGAATTCTACAGGAGAAGAAATTGGATGGGGCGTTGCTGTCCCTCTCTCTTTTGGAAATCAATTTTTCTATCCGTGGTCCTATTCAATCGAAGATGGAACTCAAGAATACCCTCTAGGGTCGTCTGAAAGTCGTCCACCTGTGAGATACAACCAAACCAACCCTCACAGTATTAGCTACAGAATTGACATCAAAGCAAAAGGTGAGGTTCAGTTGCCTAATGGATTCTACATTGTTAATAATTATCACGAGATGGTGATTTCTGCTGAAGGAATTTATGATGATACAGAAGGAAGCCTATGCATGGTAGGTTGTAGAGATCTGAGCACAAACAGATACCAACAGCCAACAAATGATTCTATAGACTGTGATATTGTTGTCAACTTCAAGTTCCCTCCAGGAAATCCAAAGACTAATCGTCGTAGTTTTATCAATGGAAGCATCAAAAGCACACGAGATAAGTATGATCCTCTTTACTTTGAGCGAGTGGAATTGACTGCAGCTGCTTACTACACTTATGATGAAGCAGAACGATCCATTTGGAGGATGGATGTGGAGATCATCTTGGTTTTAATATCCAACACACTTGCATGTTTCTTTGGGACATTGCAACTCTTTCATGTGAAAAGGCATCCGGAGGTTCTTCACTCCATTTCCACCTGCATGCTGTATATTCTTGGTCTAGGCTACCTGTTTCCTCTTACGCTAAACTTCAACGCCATGCTCACACCACTGAGTAGCCAAACTCTGTTCCTTGGAAGCAATGGATGGCATGAATTCAATGGATTAATTGTAAATGTACTGACAATGGTAGGTTTCTTGCTTCAGTTACGGCTTCTGCAGTTAACAAGGTCAGCTAGGGAAGCAAATGGAAACATAAAAGAGCTATGGGCCGTGGAGAAGCTAGCGCTCTTGGTGGCTTTACCAGTATATGTTGCAGGGTCCTTGGTTATGTTGCTCTTGATGAATTGGAGGAAGAGGGACTATATTATTGATATGGTTTCAAGGTATCAAGGACCTGATATTTTTGGTACTGTTCTGACAATTTGTGCTGGTTTGGTTTTGGATGGGTTTTTGCTACCTCAAATTGTGCTCAACATCTTCCGCAAATCAAAGGAAAAGTCTCTTGCAGTTTCGTTCTTGGTTGGAACAACTTTAGTTCGAGTGCTGCCACATGCATATGATCTTTACAGGGATCATACCTCTGGTCAAGATCAATTGAATGAGTCCTACATTTATGCAAGTCCTGCGGCTTACTTTTACTCTACCACTTGGAATGTCATTGTTCCTTGTGGAGGTCAACTTTTTGCTGTGATCATTTACTTGCAGCAGCAGTTTGGGGGAAGCTACATTCTTCCTCATAAGTTGAGAGAGTCTGATGCATATGAGAAGGTCAATATTGCAAGTGAAGCGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

944

Amino Acids

105.8

Weight (kDa)

5.74

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 36 - 221 9.4e-13 DUF2921 lipocalin-like domain
DUF2921_N PF25333 258 - 413 4.5e-26 DUF2921 lipocalin-like domain
DUF2921_N PF25333 441 - 634 1.3e-29 DUF2921 lipocalin-like domain
DUF2921 PF11145 647 - 926 7.1e-55 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2081
Acc36I ACCTGC 2 cut(s) 553, 2081
AccI GTMKAC 1 cut(s) 1298
AccIII TCCGGA 1 cut(s) 2047
AciI CCGC 5 cut(s) 277, 1206, 1360, 2518, 2663
AclWI GGATC 5 cut(s) 268, 632, 1874, 1941, 2616
AcsI RAATTY 8 cut(s) 19, 338, 376, 574, 793, 1417, 1686, 2189
AcuI CTGAAG 3 cut(s) 63, 1701, 2222
AfaI GTAC 9 cut(s) 243, 287, 358, 432, 583, 695, 801, 2214, 2446
AfeI AGCGCT 1 cut(s) 2322
AfiI CCNNNNNNNGG 4 cut(s) 1017, 1717, 1956, 2708
AflII CTTAAG 1 cut(s) 554
AhdI GACNNNNNGTC 1 cut(s) 1830
AhlI ACTAGT 2 cut(s) 590, 1100
AjnI CCWGG 4 cut(s) 142, 1279, 1311, 1810
AjuI GAANNNNNNNTTGG 2 cut(s) 1753, 1785
Alw21I GWGCWC 3 cut(s) 239, 1742, 2508
Alw26I GTCTC 2 cut(s) 97, 2541
AlwI GGATC 5 cut(s) 268, 632, 1874, 1941, 2616
Ama87I CYCGRG 1 cut(s) 517
Aor13HI TCCGGA 1 cut(s) 2047
Aor51HI AGCGCT 1 cut(s) 2322
AoxI GGCC 2 cut(s) 989, 2304
ApoI RAATTY 8 cut(s) 19, 338, 376, 574, 793, 1417, 1686, 2189
ArsI GACNNNNNNTTYG 2 cut(s) 2519, 2551
AseI ATTAAT 1 cut(s) 2201
AspLEI GCGC 1 cut(s) 2323
AspS9I GGNCC 5 cut(s) 322, 1491, 2304, 2355, 2429
AsuHPI GGTGA 2 cut(s) 1628, 1681
AsuNHI GCTAGC 1 cut(s) 2317
AvaI CYCGRG 1 cut(s) 517
AvaII GGWCC 4 cut(s) 322, 1491, 2355, 2429
BanII GRGCYC 1 cut(s) 239
BauI CACGAG 2 cut(s) 1661, 1866
Bbv12I GWGCWC 3 cut(s) 239, 1742, 2508
BccI CCATC 8 cut(s) 197, 1410, 1434, 1502, 1660, 1954, 2175, 2474
BceAI ACGGC 3 cut(s) 819, 2261, 2291
BcgI CGANNNNNNTGC 2 cut(s) 246, 280
BciT130I CCWGG 4 cut(s) 144, 1281, 1313, 1812
BclI TGATCA 1 cut(s) 2727
BcoDI GTCTC 2 cut(s) 97, 2541
BcuI ACTAGT 2 cut(s) 590, 1100
BfaI CTAG 8 cut(s) 89, 591, 1101, 1170, 1529, 2096, 2271, 2318
BfmI CTRYAG 6 cut(s) 1209, 1422, 1591, 1773, 1911, 2252
BfoI RGCGCY 1 cut(s) 2324
BfrI CTTAAG 1 cut(s) 554
BfuAI ACCTGC 2 cut(s) 553, 2081
BglII AGATCT 1 cut(s) 1732
BmcAI AGTACT 2 cut(s) 583, 801
Bme1390I CCNGG 4 cut(s) 144, 1281, 1313, 1812
Bme18I GGWCC 4 cut(s) 322, 1491, 2355, 2429
BmeRI GACNNNNNGTC 1 cut(s) 1830
BmeT110I CYCGRG 1 cut(s) 517
BmgT120I GGNCC 5 cut(s) 322, 1491, 2304, 2355, 2429
BmiI GGNNCC 4 cut(s) 323, 607, 1142, 2356
BmrFI CCNGG 4 cut(s) 144, 1281, 1313, 1812
BmsI GCATC 6 cut(s) 733, 1143, 1242, 1863, 2053, 2782
BmtI GCTAGC 1 cut(s) 2321
BplI GAGNNNNNCTC 2 cut(s) 851, 883
BpmI CTGGAG 1 cut(s) 1794
BpuEI CTTGAG 1 cut(s) 1500
BsaBI GATNNNNATC 2 cut(s) 272, 415
BsaJI CCNNGG 5 cut(s) 325, 1487, 2167, 2307, 2358
BsaWI WCCGGW 1 cut(s) 2047
BsaXI ACNNNNNCTCC 2 cut(s) 763, 793
Bsc4I CCNNNNNNNGG 4 cut(s) 1017, 1717, 1956, 2708
Bse118I RCCGGY 1 cut(s) 390
Bse1I ACTGG 5 cut(s) 354, 579, 607, 691, 2339
Bse3DI GCAATG 4 cut(s) 106, 668, 2018, 2182
Bse8I GATNNNNATC 2 cut(s) 272, 415
BseAI TCCGGA 1 cut(s) 2047
BseBI CCWGG 4 cut(s) 144, 1281, 1313, 1812
BseDI CCNNGG 5 cut(s) 325, 1487, 2167, 2307, 2358
BseGI GGATG 7 cut(s) 937, 1445, 1965, 1969, 2044, 2186, 2485
BseJI GATNNNNATC 2 cut(s) 272, 415
BseLI CCNNNNNNNGG 4 cut(s) 1017, 1717, 1956, 2708
BseMI GCAATG 4 cut(s) 106, 668, 2018, 2182
BseMII CTCAG 4 cut(s) 252, 1422, 1727, 2138
BseNI ACTGG 5 cut(s) 354, 579, 607, 691, 2339
BseRI GAGGAG 2 cut(s) 154, 738
BsgI GTGCAG 1 cut(s) 531
BshFI GGCC 2 cut(s) 991, 2306
BsiHKAI GWGCWC 3 cut(s) 239, 1742, 2508
BsiHKCI CYCGRG 1 cut(s) 517
BsiSI CCGG 3 cut(s) 153, 391, 2048
BslFI GGGAC 4 cut(s) 1046, 1439, 2029, 2408
BslI CCNNNNNNNGG 4 cut(s) 1017, 1717, 1956, 2708
BsmAI GTCTC 2 cut(s) 97, 2541
BsmFI GGGAC 4 cut(s) 1046, 1439, 2029, 2408
BsmI GAATGC 2 cut(s) 1084, 1176
BsnI GGCC 2 cut(s) 991, 2306
BsoBI CYCGRG 1 cut(s) 517
Bsp1286I GDGCHC 3 cut(s) 239, 1742, 2508
Bsp13I TCCGGA 1 cut(s) 2047
Bsp1407I TGTACA 1 cut(s) 430
BspACI CCGC 5 cut(s) 277, 1206, 1360, 2518, 2663
BspANI GGCC 2 cut(s) 991, 2306
BspCNI CTCAG 4 cut(s) 251, 1421, 1728, 2139
BspEI TCCGGA 1 cut(s) 2047
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 4 cut(s) 323, 607, 1142, 2356
BspMAI CTGCAG 3 cut(s) 1213, 1915, 2256
BspMI ACCTGC 2 cut(s) 553, 2081
BspOI GCTAGC 1 cut(s) 2321
BspPI GGATC 5 cut(s) 268, 632, 1874, 1941, 2616
BspTI CTTAAG 1 cut(s) 554
BsrDI GCAATG 4 cut(s) 106, 668, 2018, 2182
BsrFI RCCGGY 1 cut(s) 390
BsrGI TGTACA 1 cut(s) 430
BsrI ACTGG 5 cut(s) 354, 579, 607, 691, 2339
BssAI RCCGGY 1 cut(s) 390
BssECI CCNNGG 5 cut(s) 325, 1487, 2167, 2307, 2358
BssNAI GTATAC 1 cut(s) 1299
BssSI CACGAG 2 cut(s) 1661, 1866
BssT1I CCWWGG 3 cut(s) 325, 2167, 2358
Bst1107I GTATAC 1 cut(s) 1299
Bst2BI CACGAG 2 cut(s) 1661, 1866
Bst2UI CCWGG 4 cut(s) 144, 1281, 1313, 1812
Bst4CI ACNGT 6 cut(s) 7, 37, 725, 1583, 1781, 2449
Bst6I CTCTTC 1 cut(s) 2384
BstAFI CTTAAG 1 cut(s) 554
BstAPI GCANNNNNTGC 1 cut(s) 2660
BstAUI TGTACA 1 cut(s) 430
BstC8I GCNNGC 6 cut(s) 392, 396, 894, 898, 2078, 2319
BstDEI CTNAG 6 cut(s) 227, 238, 1265, 1408, 1736, 2147
BstDSI CCRYGG 2 cut(s) 1487, 2307
BstENI CCTNNNNNAGG 1 cut(s) 2706
BstF5I GGATG 7 cut(s) 937, 1445, 1965, 1969, 2044, 2186, 2485
BstH2I RGCGCY 1 cut(s) 2324
BstHHI GCGC 1 cut(s) 2323
BstMAI GTCTC 2 cut(s) 97, 2541
BstMWI GCNNNNNNNGC 5 cut(s) 83, 1860, 2276, 2660, 2822
BstNI CCWGG 4 cut(s) 144, 1281, 1313, 1812
BstNSI RCATGY 3 cut(s) 2007, 2080, 2591
BstSCI CCNGG 4 cut(s) 142, 1279, 1311, 1810
BstSFI CTRYAG 6 cut(s) 1209, 1422, 1591, 1773, 1911, 2252
BstX2I RGATCY 1 cut(s) 1732
BstYI RGATCY 1 cut(s) 1732
BstZ17I GTATAC 1 cut(s) 1299
BsuRI GGCC 2 cut(s) 991, 2306
BtgI CCRYGG 2 cut(s) 1487, 2307
BtgZI GCGATG 1 cut(s) 791
BtsCI GGATG 7 cut(s) 937, 1445, 1965, 1969, 2044, 2186, 2485
BtsIMutI CAGTG 3 cut(s) 33, 399, 2144
BveI ACCTGC 2 cut(s) 553, 2081
Cac8I GCNNGC 6 cut(s) 392, 396, 894, 898, 2078, 2319
CciI TCATGA 1 cut(s) 718
CfoI GCGC 1 cut(s) 2323
Cfr10I RCCGGY 1 cut(s) 390
Cfr13I GGNCC 5 cut(s) 322, 1491, 2304, 2355, 2429
CseI GACGC 2 cut(s) 1043, 2814
CsiI ACCWGGT 1 cut(s) 1311
Csp6I GTAC 9 cut(s) 242, 286, 357, 431, 582, 694, 800, 2213, 2445
CviQI GTAC 9 cut(s) 242, 286, 357, 431, 582, 694, 800, 2213, 2445
DdeI CTNAG 6 cut(s) 227, 238, 1265, 1408, 1736, 2147
DraI TTTAAA 1 cut(s) 762
DriI GACNNNNNGTC 1 cut(s) 1830
Eam1104I CTCTTC 1 cut(s) 2384
Eam1105I GACNNNNNGTC 1 cut(s) 1830
EarI CTCTTC 1 cut(s) 2384
Ecl136II GAGCTC 1 cut(s) 237
Eco130I CCWWGG 3 cut(s) 325, 2167, 2358
Eco147I AGGCCT 1 cut(s) 991
Eco24I GRGCYC 1 cut(s) 239
Eco47I GGWCC 4 cut(s) 322, 1491, 2355, 2429
Eco47III AGCGCT 1 cut(s) 2322
Eco53kI GAGCTC 1 cut(s) 237
Eco57I CTGAAG 3 cut(s) 63, 1701, 2222
Eco88I CYCGRG 1 cut(s) 517
EcoICRI GAGCTC 1 cut(s) 237
EcoNI CCTNNNNNAGG 1 cut(s) 2706
EcoO109I RGGNCCY 2 cut(s) 2355, 2429
EcoRI GAATTC 4 cut(s) 376, 574, 1417, 2189
EcoRII CCWGG 4 cut(s) 142, 1279, 1311, 1810
EcoT14I CCWWGG 3 cut(s) 325, 2167, 2358
EcoT22I ATGCAT 3 cut(s) 1718, 2593, 2797
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 3 cut(s) 325, 2167, 2358
FaqI GGGAC 4 cut(s) 1046, 1439, 2029, 2408
FauNDI CATATG 2 cut(s) 2593, 2797
FbaI TGATCA 1 cut(s) 2727
FblI GTMKAC 1 cut(s) 1298
FokI GGATG 7 cut(s) 944, 1452, 1972, 1976, 2031, 2193, 2492
FriOI GRGCYC 1 cut(s) 239
FspBI CTAG 8 cut(s) 89, 591, 1101, 1170, 1529, 2096, 2271, 2318
GlaI GCGC 1 cut(s) 2322
GsuI CTGGAG 1 cut(s) 1794
HaeII RGCGCY 1 cut(s) 2324
HaeIII GGCC 2 cut(s) 991, 2306
HapII CCGG 3 cut(s) 153, 391, 2048
HgaI GACGC 2 cut(s) 1043, 2814
HhaI GCGC 1 cut(s) 2323
Hin6I GCGC 1 cut(s) 2321
HinP1I GCGC 1 cut(s) 2321
HincII GTYRAC 4 cut(s) 160, 1795, 2259, 2714
HindII GTYRAC 4 cut(s) 160, 1795, 2259, 2714
HindIII AAGCTT 3 cut(s) 445, 474, 485
HpaI GTTAAC 2 cut(s) 160, 2259
HpaII CCGG 3 cut(s) 153, 391, 2048
HphI GGTGA 2 cut(s) 1628, 1681
Hpy166II GTNNAC 9 cut(s) 33, 160, 1155, 1272, 1299, 1550, 1795, 2259, 2714
Hpy188III TCNNGA 9 cut(s) 13, 571, 719, 1075, 1517, 1661, 2048, 2374, 2624
Hpy8I GTNNAC 9 cut(s) 33, 160, 1155, 1272, 1299, 1550, 1795, 2259, 2714
Hpy99I CGWCG 2 cut(s) 1836, 2830
HpyAV CCTTC 5 cut(s) 687, 1016, 1676, 1697, 2797
HpyCH4III ACNGT 6 cut(s) 7, 37, 725, 1583, 1781, 2449
HpyCH4IV ACGT 1 cut(s) 754
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 1860, 2276, 2660, 2822
HpyF3I CTNAG 6 cut(s) 227, 238, 1265, 1408, 1736, 2147
HpySE526I ACGT 1 cut(s) 754
HspAI GCGC 1 cut(s) 2321
Kpn2I TCCGGA 1 cut(s) 2047
KroI GCCGGC 1 cut(s) 390
KroNI GCCGGC 1 cut(s) 392
Ksp22I TGATCA 1 cut(s) 2727
KspAI GTTAAC 2 cut(s) 160, 2259
LmnI GCTCC 4 cut(s) 248, 751, 872, 1194
LweI GCATC 6 cut(s) 733, 1143, 1242, 1863, 2053, 2782
MabI ACCWGGT 1 cut(s) 1311
MaeI CTAG 8 cut(s) 89, 591, 1101, 1170, 1529, 2096, 2271, 2318
MaeII ACGT 1 cut(s) 754
MaeIII GTNAC 7 cut(s) 43, 185, 218, 652, 1006, 1315, 2241
MboII GAAGA 9 cut(s) 219, 720, 922, 1442, 1517, 2048, 2401, 2506, 2759
MfeI CAATTG 1 cut(s) 2630
MflI RGATCY 1 cut(s) 1732
MhlI GDGCHC 3 cut(s) 239, 1742, 2508
MlyI GAGTC 4 cut(s) 53, 1223, 2648, 2795
MmeI TCCRAC 3 cut(s) 1197, 2016, 2539
Mph1103I ATGCAT 3 cut(s) 1718, 2593, 2797
MroI TCCGGA 1 cut(s) 2047
MroNI GCCGGC 1 cut(s) 390
MslI CAYNNNNRTG 3 cut(s) 2002, 2075, 2592
MspA1I CMGCKG 3 cut(s) 83, 1208, 1916
MspCI CTTAAG 1 cut(s) 554
MspI CCGG 3 cut(s) 153, 391, 2048
MspR9I CCNGG 4 cut(s) 144, 1281, 1313, 1812
MunI CAATTG 1 cut(s) 2630
Mva1269I GAATGC 2 cut(s) 1084, 1176
MvaI CCWGG 4 cut(s) 144, 1281, 1313, 1812
MwoI GCNNNNNNNGC 5 cut(s) 83, 1860, 2276, 2660, 2822
NaeI GCCGGC 1 cut(s) 392
NdeI CATATG 2 cut(s) 2593, 2797
NgoMIV GCCGGC 1 cut(s) 390
NheI GCTAGC 1 cut(s) 2317
NlaIV GGNNCC 4 cut(s) 323, 607, 1142, 2356
NmeAIII GCCGAG 1 cut(s) 240
NmuCI GTSAC 1 cut(s) 43
NsiI ATGCAT 3 cut(s) 1718, 2593, 2797
NspI RCATGY 3 cut(s) 2007, 2080, 2591
PaeI GCATGC 1 cut(s) 2080
PaeR7I CTCGAG 1 cut(s) 517
PagI TCATGA 1 cut(s) 718
PaqCI CACCTGC 1 cut(s) 2081
PceI AGGCCT 1 cut(s) 991
PctI GAATGC 2 cut(s) 1084, 1176
PdiI GCCGGC 1 cut(s) 392
PfeI GAWTC 8 cut(s) 416, 437, 982, 1071, 1088, 1398, 1638, 1769
PfoI TCCNGGA 2 cut(s) 1279, 1810
PleI GAGTC 4 cut(s) 53, 1222, 2647, 2794
PpsI GAGTC 4 cut(s) 53, 1222, 2647, 2794
PpuMI RGGWCCY 2 cut(s) 2355, 2429
PshBI ATTAAT 1 cut(s) 2201
Psp124BI GAGCTC 1 cut(s) 239
Psp5II RGGWCCY 2 cut(s) 2355, 2429
Psp6I CCWGG 4 cut(s) 142, 1279, 1311, 1810
PspGI CCWGG 4 cut(s) 142, 1279, 1311, 1810
PspN4I GGNNCC 4 cut(s) 323, 607, 1142, 2356
PspPI GGNCC 5 cut(s) 322, 1491, 2304, 2355, 2429
PspPPI RGGWCCY 2 cut(s) 2355, 2429
PspXI VCTCGAGB 1 cut(s) 517
PsrI GAACNNNNNNTAC 2 cut(s) 677, 709
PstI CTGCAG 3 cut(s) 1213, 1915, 2256
PsuI RGATCY 1 cut(s) 1732
PvuII CAGCTG 2 cut(s) 83, 1916
RsaI GTAC 9 cut(s) 243, 287, 358, 432, 583, 695, 801, 2214, 2446
RsaNI GTAC 9 cut(s) 242, 286, 357, 431, 582, 694, 800, 2213, 2445
RseI CAYNNNNRTG 3 cut(s) 2002, 2075, 2592
SacI GAGCTC 1 cut(s) 239
Sau96I GGNCC 5 cut(s) 322, 1491, 2304, 2355, 2429
ScaI AGTACT 2 cut(s) 583, 801
SchI GAGTC 4 cut(s) 53, 1223, 2648, 2795
ScrFI CCNGG 4 cut(s) 144, 1281, 1313, 1812
SduI GDGCHC 3 cut(s) 239, 1742, 2508
SexAI ACCWGGT 1 cut(s) 1311
SfaNI GCATC 6 cut(s) 733, 1143, 1242, 1863, 2053, 2782
SfcI CTRYAG 6 cut(s) 1209, 1422, 1591, 1773, 1911, 2252
Sfr274I CTCGAG 1 cut(s) 517
SinI GGWCC 4 cut(s) 322, 1491, 2355, 2429
SlaI CTCGAG 1 cut(s) 517
SmiMI CAYNNNNRTG 3 cut(s) 2002, 2075, 2592
SmlI CTYRAG 3 cut(s) 517, 554, 1515
SmoI CTYRAG 3 cut(s) 517, 554, 1515
SpeI ACTAGT 2 cut(s) 590, 1100
SphI GCATGC 1 cut(s) 2080
SseBI AGGCCT 1 cut(s) 991
SsiI CCGC 5 cut(s) 277, 1206, 1360, 2518, 2663
SspI AATATT 2 cut(s) 916, 2812
SspMI CTAG 8 cut(s) 89, 591, 1101, 1170, 1529, 2096, 2271, 2318
SstI GAGCTC 1 cut(s) 239
StuI AGGCCT 1 cut(s) 991
StyD4I CCNGG 4 cut(s) 142, 1279, 1311, 1810
StyI CCWWGG 3 cut(s) 325, 2167, 2358
TaaI ACNGT 6 cut(s) 7, 37, 725, 1583, 1781, 2449
TaiI ACGT 1 cut(s) 757
TaqI TCGA 6 cut(s) 266, 440, 518, 1069, 1503, 2575
TatI WGTACW 7 cut(s) 241, 356, 430, 581, 693, 799, 2212
TauI GCSGC 1 cut(s) 2666
TfiI GAWTC 8 cut(s) 416, 437, 982, 1071, 1088, 1398, 1638, 1769
TscAI CASTG 3 cut(s) 40, 406, 2151
TseFI GTSAC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 43
TspGWI ACGGA 2 cut(s) 157, 1476
TspRI CASTG 3 cut(s) 40, 406, 2151
Vha464I CTTAAG 1 cut(s) 554
VpaK11BI GGWCC 4 cut(s) 322, 1491, 2355, 2429
VspI ATTAAT 1 cut(s) 2201
XagI CCTNNNNNAGG 1 cut(s) 2706
XapI RAATTY 8 cut(s) 19, 338, 376, 574, 793, 1417, 1686, 2189
XceI RCATGY 3 cut(s) 2007, 2080, 2591
XcmI CCANNNNNNNNNTGG 2 cut(s) 200, 1957
XhoI CTCGAG 1 cut(s) 517
XmiI GTMKAC 1 cut(s) 1298
XspI CTAG 8 cut(s) 89, 591, 1101, 1170, 1529, 2096, 2271, 2318
ZrmI AGTACT 2 cut(s) 583, 801
Zsp2I ATGCAT 3 cut(s) 1718, 2593, 2797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.