FvH4_6g19040

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000241
Physical Location & Seq
Forward (+)
12607972 .. 12611379
3408 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g19040.t2

Sequence Viewer

Length: 1476 bp
ATGGAAATGAGCCAAAGGCGTAAGTTGGGGGAGATTTCGAGTTACGAGGGTGAAGGAGGTTGTGGTGAGAATGAGAGTGGGATAGACAGATTTAGCGATCTTCCGGATCATGTTGCACATCACATTCTTTCCTTCCTGGCTTTGCCGGACCTTAGTCGTGTGTGTTGTGTGTCCAAAAGGTGTGGGGAACTTTGTATATTTGCTCCTTCATTGAATTTTGATGAGTTCCCCTCGGATGCTATGTCCACGTGTGGTGGGCGGTTGAATTTGTTGACTTATTTGGAGAGGTTCTTGTTTCATGGTGGGGATAATAAGATACAGTCGTTTCGTGTCCGTTGGGAACGTCATTATATGGATGAAGATGCGACACCATGTATCTGTGATAATGAGCATTATCGATTGAGCACGTGGATCCAGAATGCAGTATGGTGTAATGTTGAAGTGCTTGATCTTAAGATGAATTTATATGATACTGAGTTGATGTGTTTGCCATCTTGTGGGTTTCTCTGTGCACATTTGTGGTCTCTGGTCGTAGACATGACTATTGCGGTCATCAAGACCCCATCTTCTGCCTTTTCCTCTAATCTCAAGTACTTGGAGTTGAGGAATGTTTATATAGAAGATGATGATTTTTTCAAGTGGATCTCACATTCCTGCAAGTGCATTGAGGATTTACATCTTGGTCAACTTCATGGGGTAGAACGCATCACCCTTTTAAGGCCATCTTTGAAAAGGTTTAGTTTCATTTGTGGCTCTCTGGATCATATGATGAGCCATATTAGTATCTCAAGTGAGAAACTTGTGGACTTACAAATTTGCTGGACATTTGATTCACCTAGCAACAAATCCTTAAATATGGACGCCCCAAATCTTAAATGTTTCAAATGGATTGGAAATTTGATGAAATACCCAAACCTGGGAAAGCTAGAATGCTTAAAAACGGCTGCTGTTTGTCTGGTGCCTGAAGAAGATGACTTGGACAAGGTGCATGAGTTTCTTTGGAGTTTACGCAGGGCTCCATCTCTTATGCTAAATGAAGTGGCCATTAAGGCTTCATTTAGGGATGCATCTGTGCCGGCTTCATTGTATGATACTTCTTATTTGTCTTTGAATATCAAAAGCTTTCCTGATGACCTGGTCCCGGCATTGGTCTGTGTCTTAAGAAGAACGCCTAAACTGAGTTTGTTATGCATACAGTCTGAACCACCACAGGACCCTCAATCTAATACATTTGGGTATAATATGGAATACTGGAAGCTGCAAGACCTGGCTTTTACTAATCAACTTAAGCATGCTATTATAGAGCTTTGCCGTGGCTCTAATGGAATTGAGTTTGCAAAGTATGTGCTCAAGTATGCTCCGAATATGCTGAGAATGGTTGTGATTTGTTTGCCCGTAGATCTGAAGGAAGTTACAACAAAATTAAAGAAAATCAGGAGGATTTCAAATGCTGCACTTGTCATTCAGAAAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

492

Amino Acids

56.05

Weight (kDa)

6.18

Isoelectric Point (pI)

53.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 31 - 65 3.1e-06 F-box domain
F-box-like PF12937 31 - 60 7.2e-06 F-box-like
LRR_At5g56370 PF24758 135 - 294 2.4e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000241)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g18954 FvH4_6g18982 FvH4_6g19010 FvH4_6g19020 FvH4_6g19020 FvH4_6g19030 FvH4_6g19030 FvH4_6g19040 FvH4_6g19040 FvH4_6g19040 FvH4_6g19051 FvH4_6g19090 FvH4_6g19090 FvH4_6g19090 FvH4_6g33920 FvH4_6g33940
malus_domestica MD00G1221800.v1.1 MD04G1145400.v1.1 MD12G1026400.v1.1 MD12G1026500.v1.1 MD12G1026700.v1.1 MD12G1026800.v1.1 MD14G1024900.v1.1 MD14G1025000.v1.1 MD14G1025100.v1.1 MD14G1025200.v1.1 MD14G1025300.v1.1 MD14G1025400.v1.1 MD14G1025600.v1.1 MD14G1026200.v1.1 MD14G1026700.v1.1
prunus_persica Prupe.7G104800_v2.0.a1 Prupe.7G104900_v2.0.a1 Prupe.7G105000_v2.0.a1 Prupe.7G105500_v2.0.a1 Prupe.7G105500_v2.0.a1 Prupe.7G105600_v2.0.a1 Prupe.7G105900_v2.0.a1 Prupe.7G106200_v2.0.a1
pyrus_communis pycom04g13160 pycom07g14430 pycom12g02570 pycom14g02380 pycom14g02430 pycom14g02470 pycom14g02480 pycom14g02490
rosa_chinensis RchiOBHm_Chr3g0474001 RchiOBHm_Chr3g0474011 RchiOBHm_Chr3g0474021 RchiOBHm_Chr3g0474031 RchiOBHm_Chr3g0474041 RchiOBHm_Chr3g0474111 RchiOBHm_Chr3g0474131 RchiOBHm_Chr3g0474161 RchiOBHm_Chr3g0474191
rosa_laevigata RLG00000023848 RLG00000023942 RLG00000023944 RLG00000023946 RLG00000023948 RLG00000023956 RLG00000023957 RLG00000023958
rosa_multiflora Rmu_co8028860.1_g000001 Rmu_sc0002414.1_g000007 Rmu_sc0003170.1_g000008 Rmu_sc0003170.1_g000009 Rmu_sc0004167.1_g000001 Rmu_sc0004507.1_g000023 Rmu_sc0004507.1_g000029 Rmu_sc0004507.1_g000030 Rmu_sc0004507.1_g000032 Rmu_sc0004507.1_g000045 Rmu_sc0005137.1_g000004 Rmu_sc0015051.1_g000002 Rmu_sc0027615.1_g000001 Rmu_sc0027615.1_g000002
rosa_roxburghii Rroxscaffold_6G00407440 Rroxscaffold_6G00407450 Rroxscaffold_6G00407470 Rroxscaffold_6G00407550 Rroxscaffold_6G00407560 Rroxscaffold_6G00407570
rosa_rugosa Rorug03G0137600 Rorug03G0137600 Rorug03G0137600 Rorug03G0138800 Rorug03G0138900 Rorug03G0139200 Rorug03G0139300 Rorug03G0139300 Rorug03G0139400 Rorug03G0139500
rosa_samantha Rh3AG187700 Rh3AG187800 Rh3AG187900 Rh3AG188000 Rh3AG188100 Rh3AG188700 Rh3AG188900 Rh3AG189100 Rh3AG189200 Rh3AG189800 Rh3BG216500 Rh3BG216600 Rh3BG216700 Rh3BG216800 Rh3BG216900 Rh3BG218300 Rh3BG218500 Rh3BG219000 Rh3CG212900 Rh3CG213000 Rh3CG213100 Rh3CG213200 Rh3CG214000 Rh3CG214200 Rh3CG214400 Rh3CG222800 Rh3DG212300 Rh3DG212400 Rh3DG212500 Rh3DG212600 Rh3DG212700 Rh3DG213200 Rh3DG213500 Rh3DG213700 Rh3DG213800 Rh3DG214400 Rh3DG214500 Rh3DG223800
rosa_wichuraiana Rw3G017170 Rw3G017200 Rw3G017210 Rw3G017220 Rw3G017230 Rw3G017290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 958
AccB7I CCANNNNNTGG 1 cut(s) 497
AccI GTMKAC 1 cut(s) 534
AccIII TCCGGA 1 cut(s) 103
AciI CCGC 2 cut(s) 259, 548
AclWI GGATC 5 cut(s) 114, 406, 419, 650, 768
AcoI YGGCCR 1 cut(s) 1041
AcsI RAATTY 5 cut(s) 214, 265, 460, 813, 895
AcuI CTGAAG 2 cut(s) 984, 1424
AcvI CACGTG 2 cut(s) 249, 408
AcyI GRCGYC 1 cut(s) 861
AfaI GTAC 1 cut(s) 593
AfiI CCNNNNNNNGG 6 cut(s) 497, 717, 916, 917, 1141, 1147
AflII CTTAAG 3 cut(s) 452, 1159, 1286
AflIII ACRYGT 1 cut(s) 248
AgsI TTSAA 8 cut(s) 214, 265, 440, 637, 730, 883, 1111, 1446
AjnI CCWGG 4 cut(s) 135, 915, 1134, 1266
AleI CACNNNNGTG 1 cut(s) 517
AluBI AGCT 4 cut(s) 925, 1122, 1258, 1306
AluI AGCT 4 cut(s) 925, 1122, 1258, 1306
Alw21I GWGCWC 3 cut(s) 407, 514, 1350
Alw26I GTCTC 1 cut(s) 528
Alw44I GTGCAC 1 cut(s) 510
AlwI GGATC 5 cut(s) 114, 406, 419, 650, 768
Aor13HI TCCGGA 1 cut(s) 103
AoxI GGCC 2 cut(s) 719, 1041
ApaLI GTGCAC 1 cut(s) 510
ApeKI GCWGC 3 cut(s) 944, 1258, 1451
ApoI RAATTY 5 cut(s) 214, 265, 460, 813, 895
AspS9I GGNCC 3 cut(s) 148, 1138, 1213
AsuC2I CCSGG 1 cut(s) 1142
AsuHPI GGTGA 4 cut(s) 62, 77, 700, 825
AvaII GGWCC 3 cut(s) 148, 1138, 1213
BaeGI GKGCMC 1 cut(s) 514
BaeI ACNNNNGTAYC 2 cut(s) 308, 341
BalI TGGCCA 1 cut(s) 1043
BamHI GGATCC 1 cut(s) 411
BanI GGYRCC 1 cut(s) 958
BanII GRGCYC 1 cut(s) 1018
BbrPI CACGTG 2 cut(s) 249, 408
Bbv12I GWGCWC 3 cut(s) 407, 514, 1350
BbvI GCAGC 3 cut(s) 931, 1245, 1438
BccI CCATC 4 cut(s) 499, 571, 730, 1027
BceAI ACGGC 2 cut(s) 957, 1296
BciT130I CCWGG 4 cut(s) 137, 917, 1136, 1268
BcnI CCSGG 1 cut(s) 1142
BcoDI GTCTC 1 cut(s) 528
BfaI CTAG 2 cut(s) 837, 926
BfrI CTTAAG 3 cut(s) 452, 1159, 1286
BglI GCCNNNNNGGC 1 cut(s) 1049
BglII AGATCT 1 cut(s) 1399
BisI GCNGC 3 cut(s) 945, 1259, 1452
BlsI GCNGC 3 cut(s) 946, 1260, 1453
BmcAI AGTACT 1 cut(s) 593
Bme1390I CCNGG 5 cut(s) 137, 917, 1136, 1142, 1268
Bme18I GGWCC 3 cut(s) 148, 1138, 1213
BmgT120I GGNCC 3 cut(s) 148, 1138, 1213
BmiI GGNNCC 5 cut(s) 413, 960, 1017, 1140, 1215
BmrFI CCNGG 5 cut(s) 137, 917, 1136, 1142, 1268
BmsI GCATC 5 cut(s) 226, 352, 714, 1054, 1076
BoxI GACNNNNGTC 1 cut(s) 153
BplI GAGNNNNNCTC 2 cut(s) 215, 247
BpuEI CTTGAG 3 cut(s) 572, 772, 1334
BpuMI CCSGG 1 cut(s) 1142
Bsa29I ATCGAT 1 cut(s) 397
BsaAI YACGTR 2 cut(s) 249, 408
BsaBI GATNNNNATC 1 cut(s) 675
BsaHI GRCGYC 1 cut(s) 861
BsaI GGTCTC 1 cut(s) 528
BsaJI CCNNGG 3 cut(s) 231, 916, 1312
BsaWI WCCGGW 1 cut(s) 103
Bsc4I CCNNNNNNNGG 6 cut(s) 497, 717, 916, 917, 1141, 1147
Bse118I RCCGGY 1 cut(s) 1075
Bse1I ACTGG 1 cut(s) 1256
Bse8I GATNNNNATC 1 cut(s) 675
BseAI TCCGGA 1 cut(s) 103
BseBI CCWGG 4 cut(s) 137, 917, 1136, 1268
BseCI ATCGAT 1 cut(s) 397
BseDI CCNNGG 3 cut(s) 231, 916, 1312
BseGI GGATG 3 cut(s) 241, 361, 1069
BseJI GATNNNNATC 1 cut(s) 675
BseLI CCNNNNNNNGG 6 cut(s) 497, 717, 916, 917, 1141, 1147
BseMII CTCAG 3 cut(s) 465, 1169, 1361
BseNI ACTGG 1 cut(s) 1256
BseSI GKGCMC 1 cut(s) 514
BseXI GCAGC 3 cut(s) 931, 1245, 1438
BsgI GTGCAG 1 cut(s) 1437
BshFI GGCC 2 cut(s) 721, 1043
BshNI GGYRCC 1 cut(s) 958
BshVI ATCGAT 1 cut(s) 397
BsiHKAI GWGCWC 3 cut(s) 407, 514, 1350
BsiSI CCGG 4 cut(s) 104, 146, 1076, 1142
BslFI GGGAC 1 cut(s) 1124
BslI CCNNNNNNNGG 6 cut(s) 497, 717, 916, 917, 1141, 1147
BsmAI GTCTC 1 cut(s) 528
BsmFI GGGAC 1 cut(s) 1124
BsmI GAATGC 2 cut(s) 424, 935
BsnI GGCC 2 cut(s) 721, 1043
Bso31I GGTCTC 1 cut(s) 528
Bsp1286I GDGCHC 4 cut(s) 407, 514, 1018, 1350
Bsp13I TCCGGA 1 cut(s) 103
Bsp143I GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
BspACI CCGC 2 cut(s) 259, 548
BspANI GGCC 2 cut(s) 721, 1043
BspCNI CTCAG 3 cut(s) 466, 1170, 1362
BspDI ATCGAT 1 cut(s) 397
BspEI TCCGGA 1 cut(s) 103
BspLI GGNNCC 5 cut(s) 413, 960, 1017, 1140, 1215
BspPI GGATC 5 cut(s) 114, 406, 419, 650, 768
BspT107I GGYRCC 1 cut(s) 958
BspTI CTTAAG 3 cut(s) 452, 1159, 1286
BspTNI GGTCTC 1 cut(s) 528
BsrFI RCCGGY 1 cut(s) 1075
BsrI ACTGG 1 cut(s) 1256
BssAI RCCGGY 1 cut(s) 1075
BssECI CCNNGG 3 cut(s) 231, 916, 1312
BssMI GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
BssNI GRCGYC 1 cut(s) 861
Bst2UI CCWGG 4 cut(s) 137, 917, 1136, 1268
Bst4CI ACNGT 2 cut(s) 321, 1197
BstACI GRCGYC 1 cut(s) 861
BstAFI CTTAAG 3 cut(s) 452, 1159, 1286
BstBAI YACGTR 2 cut(s) 249, 408
BstC8I GCNNGC 2 cut(s) 1077, 1293
BstDEI CTNAG 4 cut(s) 152, 474, 1178, 1370
BstDSI CCRYGG 1 cut(s) 1312
BstF5I GGATG 3 cut(s) 241, 361, 1069
BstKTI GATC 7 cut(s) 100, 109, 414, 451, 645, 763, 1402
BstMAI GTCTC 1 cut(s) 528
BstMBI GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
BstMWI GCNNNNNNNGC 1 cut(s) 1049
BstNI CCWGG 4 cut(s) 137, 917, 1136, 1268
BstNSI RCATGY 1 cut(s) 1295
BstPAI GACNNNNGTC 1 cut(s) 153
BstSCI CCNGG 5 cut(s) 135, 915, 1134, 1140, 1266
BstSLI GKGCMC 1 cut(s) 514
BstV1I GCAGC 3 cut(s) 931, 1245, 1438
BstX2I RGATCY 3 cut(s) 411, 642, 1399
BstYI RGATCY 3 cut(s) 411, 642, 1399
Bsu15I ATCGAT 1 cut(s) 397
BsuRI GGCC 2 cut(s) 721, 1043
BsuTUI ATCGAT 1 cut(s) 397
BtgI CCRYGG 1 cut(s) 1312
BtsCI GGATG 3 cut(s) 241, 361, 1069
Cac8I GCNNGC 2 cut(s) 1077, 1293
Cfr10I RCCGGY 1 cut(s) 1075
Cfr13I GGNCC 3 cut(s) 148, 1138, 1213
ClaI ATCGAT 1 cut(s) 397
CseI GACGC 1 cut(s) 869
CsiI ACCWGGT 1 cut(s) 1134
Csp6I GTAC 1 cut(s) 592
CspCI CAANNNNNGTGG 2 cut(s) 163, 198
CviAII CATG 7 cut(s) 110, 299, 372, 538, 692, 989, 1292
CviQI GTAC 1 cut(s) 592
DdeI CTNAG 4 cut(s) 152, 474, 1178, 1370
DpnI GATC 7 cut(s) 99, 108, 413, 450, 644, 762, 1401
DpnII GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
EaeI YGGCCR 1 cut(s) 1041
Eco24I GRGCYC 1 cut(s) 1018
Eco31I GGTCTC 1 cut(s) 528
Eco47I GGWCC 3 cut(s) 148, 1138, 1213
Eco57I CTGAAG 2 cut(s) 984, 1424
Eco72I CACGTG 2 cut(s) 249, 408
EcoO109I RGGNCCY 1 cut(s) 1213
EcoRII CCWGG 4 cut(s) 135, 915, 1134, 1266
EcoT22I ATGCAT 2 cut(s) 1069, 1193
EcoT38I GRGCYC 1 cut(s) 1018
FaeI CATG 7 cut(s) 113, 302, 375, 541, 695, 992, 1295
FalI AAGNNNNNCTT 2 cut(s) 709, 741
FaqI GGGAC 1 cut(s) 1124
FatI CATG 7 cut(s) 109, 298, 371, 537, 691, 988, 1291
FauNDI CATATG 1 cut(s) 765
FblI GTMKAC 1 cut(s) 534
Fnu4HI GCNGC 3 cut(s) 945, 1259, 1452
FokI GGATG 3 cut(s) 248, 368, 1076
FriOI GRGCYC 1 cut(s) 1018
Fsp4HI GCNGC 3 cut(s) 945, 1259, 1452
FspBI CTAG 2 cut(s) 837, 926
GluI GCNGC 3 cut(s) 945, 1259, 1452
HaeIII GGCC 2 cut(s) 721, 1043
HapII CCGG 4 cut(s) 104, 146, 1076, 1142
HgaI GACGC 1 cut(s) 869
Hin1I GRCGYC 1 cut(s) 861
Hin1II CATG 7 cut(s) 113, 302, 375, 541, 695, 992, 1295
HincII GTYRAC 2 cut(s) 273, 686
HindII GTYRAC 2 cut(s) 273, 686
HindIII AAGCTT 1 cut(s) 1120
HinfI GANTC 1 cut(s) 830
HpaII CCGG 4 cut(s) 104, 146, 1076, 1142
HphI GGTGA 4 cut(s) 62, 77, 700, 825
Hpy166II GTNNAC 7 cut(s) 246, 273, 512, 535, 686, 805, 1007
Hpy188I TCNGA 5 cut(s) 235, 1201, 1362, 1404, 1467
Hpy188III TCNNGA 6 cut(s) 104, 415, 556, 758, 1127, 1435
Hpy8I GTNNAC 7 cut(s) 246, 273, 512, 535, 686, 805, 1007
HpyAV CCTTC 4 cut(s) 47, 142, 216, 1399
HpyCH4III ACNGT 2 cut(s) 321, 1197
HpyCH4IV ACGT 3 cut(s) 248, 343, 407
HpyF10VI GCNNNNNNNGC 1 cut(s) 1049
HpyF3I CTNAG 4 cut(s) 152, 474, 1178, 1370
HpySE526I ACGT 3 cut(s) 248, 343, 407
Hsp92I GRCGYC 1 cut(s) 861
Hsp92II CATG 7 cut(s) 113, 302, 375, 541, 695, 992, 1295
Kpn2I TCCGGA 1 cut(s) 103
KroI GCCGGC 1 cut(s) 1075
KroNI GCCGGC 1 cut(s) 1077
Kzo9I GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
LmnI GCTCC 3 cut(s) 208, 1021, 1363
Lsp1109I GCAGC 3 cut(s) 931, 1245, 1438
LweI GCATC 5 cut(s) 226, 352, 714, 1054, 1076
MabI ACCWGGT 1 cut(s) 1134
MaeI CTAG 2 cut(s) 837, 926
MaeII ACGT 3 cut(s) 248, 343, 407
MaeIII GTNAC 2 cut(s) 41, 1411
MalI GATC 7 cut(s) 99, 108, 413, 450, 644, 762, 1401
MboI GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
MboII GAAGA 7 cut(s) 92, 371, 558, 632, 977, 980, 1176
MflI RGATCY 3 cut(s) 411, 642, 1399
MhlI GDGCHC 4 cut(s) 407, 514, 1018, 1350
MlsI TGGCCA 1 cut(s) 1043
MluCI AATT 7 cut(s) 214, 265, 460, 813, 895, 1326, 1421
MluNI TGGCCA 1 cut(s) 1043
MnlI CCTC 9 cut(s) 40, 50, 241, 279, 589, 597, 661, 1227, 1431
Mox20I TGGCCA 1 cut(s) 1043
Mph1103I ATGCAT 2 cut(s) 1069, 1193
MroI TCCGGA 1 cut(s) 103
MroNI GCCGGC 1 cut(s) 1075
MscI TGGCCA 1 cut(s) 1043
MseI TTAA 9 cut(s) 453, 716, 851, 873, 935, 1047, 1160, 1287, 1424
MslI CAYNNNNRTG 1 cut(s) 517
Msp20I TGGCCA 1 cut(s) 1043
MspCI CTTAAG 3 cut(s) 452, 1159, 1286
MspI CCGG 4 cut(s) 104, 146, 1076, 1142
MspR9I CCNGG 5 cut(s) 137, 917, 1136, 1142, 1268
Mva1269I GAATGC 2 cut(s) 424, 935
MvaI CCWGG 4 cut(s) 137, 917, 1136, 1268
MwoI GCNNNNNNNGC 1 cut(s) 1049
NaeI GCCGGC 1 cut(s) 1077
NciI CCSGG 1 cut(s) 1142
NdeI CATATG 1 cut(s) 765
NdeII GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
NgoMIV GCCGGC 1 cut(s) 1075
NlaIII CATG 7 cut(s) 113, 302, 375, 541, 695, 992, 1295
NlaIV GGNNCC 5 cut(s) 413, 960, 1017, 1140, 1215
NsiI ATGCAT 2 cut(s) 1069, 1193
NspI RCATGY 1 cut(s) 1295
OliI CACNNNNGTG 1 cut(s) 517
PaeI GCATGC 1 cut(s) 1295
PctI GAATGC 2 cut(s) 424, 935
PdiI GCCGGC 1 cut(s) 1077
PfeI GAWTC 1 cut(s) 830
PflFI GACNNNGTC 1 cut(s) 1136
PflMI CCANNNNNTGG 1 cut(s) 497
PkrI GCNGC 3 cut(s) 946, 1260, 1453
PmaCI CACGTG 2 cut(s) 249, 408
PmlI CACGTG 2 cut(s) 249, 408
Ppu21I YACGTR 2 cut(s) 249, 408
PpuMI RGGWCCY 1 cut(s) 1213
PshAI GACNNNNGTC 1 cut(s) 153
Psp5II RGGWCCY 1 cut(s) 1213
Psp6I CCWGG 4 cut(s) 135, 915, 1134, 1266
PspCI CACGTG 2 cut(s) 249, 408
PspGI CCWGG 4 cut(s) 135, 915, 1134, 1266
PspN4I GGNNCC 5 cut(s) 413, 960, 1017, 1140, 1215
PspPI GGNCC 3 cut(s) 148, 1138, 1213
PspPPI RGGWCCY 1 cut(s) 1213
PsuI RGATCY 3 cut(s) 411, 642, 1399
PsyI GACNNNGTC 1 cut(s) 1136
RsaI GTAC 1 cut(s) 593
RsaNI GTAC 1 cut(s) 592
RseI CAYNNNNRTG 1 cut(s) 517
SaqAI TTAA 9 cut(s) 453, 716, 851, 873, 935, 1047, 1160, 1287, 1424
SatI GCNGC 3 cut(s) 945, 1259, 1452
Sau3AI GATC 7 cut(s) 97, 106, 411, 448, 642, 760, 1399
Sau96I GGNCC 3 cut(s) 148, 1138, 1213
ScaI AGTACT 1 cut(s) 593
ScrFI CCNGG 5 cut(s) 137, 917, 1136, 1142, 1268
SduI GDGCHC 4 cut(s) 407, 514, 1018, 1350
SexAI ACCWGGT 1 cut(s) 1134
SfaNI GCATC 5 cut(s) 226, 352, 714, 1054, 1076
SinI GGWCC 3 cut(s) 148, 1138, 1213
SmiMI CAYNNNNRTG 1 cut(s) 517
SmlI CTYRAG 6 cut(s) 452, 587, 787, 1159, 1286, 1349
SmoI CTYRAG 6 cut(s) 452, 587, 787, 1159, 1286, 1349
SphI GCATGC 1 cut(s) 1295
Sse9I AATT 7 cut(s) 214, 265, 460, 813, 895, 1326, 1421
SsiI CCGC 2 cut(s) 259, 548
SspMI CTAG 2 cut(s) 837, 926
StyD4I CCNGG 5 cut(s) 135, 915, 1134, 1140, 1266
TaaI ACNGT 2 cut(s) 321, 1197
TaiI ACGT 3 cut(s) 251, 346, 410
TaqI TCGA 2 cut(s) 38, 397
TasI AATT 7 cut(s) 214, 265, 460, 813, 895, 1326, 1421
TatI WGTACW 1 cut(s) 591
TfiI GAWTC 1 cut(s) 830
Tru1I TTAA 9 cut(s) 453, 716, 851, 873, 935, 1047, 1160, 1287, 1424
Tru9I TTAA 9 cut(s) 453, 716, 851, 873, 935, 1047, 1160, 1287, 1424
TseI GCWGC 3 cut(s) 944, 1258, 1451
TspGWI ACGGA 1 cut(s) 323
Tth111I GACNNNGTC 1 cut(s) 1136
Van91I CCANNNNNTGG 1 cut(s) 497
Vha464I CTTAAG 3 cut(s) 452, 1159, 1286
VneI GTGCAC 1 cut(s) 510
VpaK11BI GGWCC 3 cut(s) 148, 1138, 1213
XapI RAATTY 5 cut(s) 214, 265, 460, 813, 895
XceI RCATGY 1 cut(s) 1295
XmiI GTMKAC 1 cut(s) 534
XspI CTAG 2 cut(s) 837, 926
ZrmI AGTACT 1 cut(s) 593
Zsp2I ATGCAT 2 cut(s) 1069, 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.