Rw3G017220

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000241
Physical Location & Seq
Forward (+)
18643083 .. 18645893
2811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G017220.1

Sequence Viewer

Length: 1479 bp
ATGGCGCCCAAGCCTAAGAAAAGGGCTATTGCAAGTTGTGAGGGTGGAGGAGGAGGTTGTAGCGAGAGTAAGAGCATGATAGACAGGCTTAGTGATCTTCCAGATCAGGTTGCACATCACATTCTTTCGTTTCTAACTGTGATGGACCTCGTTCGAGTGTGTTGTGTGTCCAAAAGATGGAGAGAGCTTTCTCTGTCTGCCCCGTGTTTGAATTTTGATGAGATTCCGTCGGGTTGTAGATCCACGTGCCGTGACCGGCTGCAGTTGATGACGTATTTGGAGAGGTACTTGTTTCATCGTGGGGGTAATAAGATACAGTCGTTTTGTGTCAATTGGGAGCGGCACTATATGGATGAAAATGAAACTGTGTGCATCTGTGCTAGCGAGCATTATCGACTCATCACATGGATTAATAGTGCGGTGAGGTGTAATGTTGAAGTGCTTGACCTTAAGATGACTCTGTATGATCCCGAGGAGGCACCGTTTCCGTCTAGCGTCTTTCTCTGTGGAACTTTGAGGTCCCTAGCGGTGGATATGAATTTTACTCTTCTTAGAACGCCCTCGTTTGGTTTTTCCTCAAATCTGACTAAGTTGGAGTTAAAAGATGTTGTGATAGAGGACGACCGGTTTTTCAAATGGGTCTCATGTTCCTGCAAGTTCATTGAGGAGTTACATCTTGATCAAGTTCGTGGAATTAAAACTATCAGTGTTGAAAGCTCGTCTCTGAAAATATTGAGGTTTTTTGATGTGTTCAACACCTCCCATCTTAGCATATCAGGTGAGAAACTTGAAGACATAGTTGTGGGCTGGTATGTTGAATCACCTAGCAACAGTTCCTTAAATATTTGTGCCCCAAATCTTAGGTGTTTGAGTTGGAGTGGGAAATTGATGAATCACCTAACTCTGGGAAAGTTCAGACATTTAGAAGCTGCTGTGCTTCGTCTTAGGCCTGATGAAAATGAATTAGACAAAGTGTATGAGGTTCTTTGCAGTTTATGCAAGGTTAGAGCTCTTATGCTGAACGAAGCAACCATTAAGGTTCCATTCAGTAAAGGATCCATGCGAGCTCCAATATATAATATTCATTGTTTGACTATGGATATTGGAAGCATTACTGACGAGTTGGTTCCAGCAATAGTTTCTCTCTTCAGAGGATTGCCTAATATGTATATTCTTTGTATACAGTCTAAAACCCCCCTAGACAACCCTCAATCTAATACATCTGGGTTTGATATGGGATATTGGAAGTTGCAAAACCTTGCTTTTATTGATCATCTGAAGGTGGTCAGCATAGAACTTTGCAATGACTCCAATGCAATTGATTTAGCAAGGTATATTCTTGAGTGCGCTCAGAATTTGCTGCAAATGATTGTTATTTATCCACCCCAGGATTCAGAGATAGTTACAAGGAAGTTAAAGGAAAGCAAGATAGCTTCTGGTGCCACAGTTGTCTTTCGTGAAAAAGAGAAAAGTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

492

Amino Acids

55.69

Weight (kDa)

6.61

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 30 - 65 1.7e-09 F-box-like
F-box PF00646 30 - 66 3.4e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 124 - 257 3.3e-09 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 135 - 304 4.4e-12 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000241)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g18954 FvH4_6g18982 FvH4_6g19010 FvH4_6g19020 FvH4_6g19020 FvH4_6g19030 FvH4_6g19030 FvH4_6g19040 FvH4_6g19040 FvH4_6g19040 FvH4_6g19051 FvH4_6g19090 FvH4_6g19090 FvH4_6g19090 FvH4_6g33920 FvH4_6g33940
malus_domestica MD00G1221800.v1.1 MD04G1145400.v1.1 MD12G1026400.v1.1 MD12G1026500.v1.1 MD12G1026700.v1.1 MD12G1026800.v1.1 MD14G1024900.v1.1 MD14G1025000.v1.1 MD14G1025100.v1.1 MD14G1025200.v1.1 MD14G1025300.v1.1 MD14G1025400.v1.1 MD14G1025600.v1.1 MD14G1026200.v1.1 MD14G1026700.v1.1
prunus_persica Prupe.7G104800_v2.0.a1 Prupe.7G104900_v2.0.a1 Prupe.7G105000_v2.0.a1 Prupe.7G105500_v2.0.a1 Prupe.7G105500_v2.0.a1 Prupe.7G105600_v2.0.a1 Prupe.7G105900_v2.0.a1 Prupe.7G106200_v2.0.a1
pyrus_communis pycom04g13160 pycom07g14430 pycom12g02570 pycom14g02380 pycom14g02430 pycom14g02470 pycom14g02480 pycom14g02490
rosa_chinensis RchiOBHm_Chr3g0474001 RchiOBHm_Chr3g0474011 RchiOBHm_Chr3g0474021 RchiOBHm_Chr3g0474031 RchiOBHm_Chr3g0474041 RchiOBHm_Chr3g0474111 RchiOBHm_Chr3g0474131 RchiOBHm_Chr3g0474161 RchiOBHm_Chr3g0474191
rosa_laevigata RLG00000023848 RLG00000023942 RLG00000023944 RLG00000023946 RLG00000023948 RLG00000023956 RLG00000023957 RLG00000023958
rosa_multiflora Rmu_co8028860.1_g000001 Rmu_sc0002414.1_g000007 Rmu_sc0003170.1_g000008 Rmu_sc0003170.1_g000009 Rmu_sc0004167.1_g000001 Rmu_sc0004507.1_g000023 Rmu_sc0004507.1_g000029 Rmu_sc0004507.1_g000030 Rmu_sc0004507.1_g000032 Rmu_sc0004507.1_g000045 Rmu_sc0005137.1_g000004 Rmu_sc0015051.1_g000002 Rmu_sc0027615.1_g000001 Rmu_sc0027615.1_g000002
rosa_roxburghii Rroxscaffold_6G00407440 Rroxscaffold_6G00407450 Rroxscaffold_6G00407470 Rroxscaffold_6G00407550 Rroxscaffold_6G00407560 Rroxscaffold_6G00407570
rosa_rugosa Rorug03G0137600 Rorug03G0137600 Rorug03G0137600 Rorug03G0138800 Rorug03G0138900 Rorug03G0139200 Rorug03G0139300 Rorug03G0139300 Rorug03G0139400 Rorug03G0139500
rosa_samantha Rh3AG187700 Rh3AG187800 Rh3AG187900 Rh3AG188000 Rh3AG188100 Rh3AG188700 Rh3AG188900 Rh3AG189100 Rh3AG189200 Rh3AG189800 Rh3BG216500 Rh3BG216600 Rh3BG216700 Rh3BG216800 Rh3BG216900 Rh3BG218300 Rh3BG218500 Rh3BG219000 Rh3CG212900 Rh3CG213000 Rh3CG213100 Rh3CG213200 Rh3CG214000 Rh3CG214200 Rh3CG214400 Rh3CG222800 Rh3DG212300 Rh3DG212400 Rh3DG212500 Rh3DG212600 Rh3DG212700 Rh3DG213200 Rh3DG213500 Rh3DG213700 Rh3DG213800 Rh3DG214400 Rh3DG214500 Rh3DG223800
rosa_wichuraiana Rw3G017170 Rw3G017200 Rw3G017210 Rw3G017220 Rw3G017230 Rw3G017290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 4, 478, 1439
AccB7I CCANNNNNTGG 1 cut(s) 177
AccBSI CCGCTC 1 cut(s) 340
AccI GTMKAC 1 cut(s) 1180
AciI CCGC 3 cut(s) 340, 419, 527
AclWI GGATC 4 cut(s) 234, 461, 1050, 1063
AcsI RAATTY 3 cut(s) 211, 538, 1354
AcuI CTGAAG 2 cut(s) 1132, 1298
AcvI CACGTG 1 cut(s) 246
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 287
AfiI CCNNNNNNNGG 4 cut(s) 177, 529, 566, 904
AflII CTTAAG 1 cut(s) 449
AgeI ACCGGT 1 cut(s) 624
AgsI TTSAA 7 cut(s) 211, 437, 634, 713, 754, 791, 818
AjnI CCWGG 1 cut(s) 1386
AluBI AGCT 6 cut(s) 187, 717, 929, 1010, 1067, 1433
AluI AGCT 6 cut(s) 187, 717, 929, 1010, 1067, 1433
Alw21I GWGCWC 2 cut(s) 1012, 1069
Alw26I GTCTC 2 cut(s) 646, 726
AlwI GGATC 4 cut(s) 234, 461, 1050, 1063
Ama87I CYCGRG 1 cut(s) 470
AoxI GGCC 1 cut(s) 947
ApeKI GCWGC 3 cut(s) 259, 929, 1360
ApoI RAATTY 3 cut(s) 211, 538, 1354
AseI ATTAAT 1 cut(s) 411
AsiGI ACCGGT 1 cut(s) 624
AspLEI GCGC 2 cut(s) 7, 1349
AspS9I GGNCC 2 cut(s) 145, 519
AsuHPI GGTGA 4 cut(s) 433, 791, 813, 887
AsuNHI GCTAGC 1 cut(s) 380
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 2 cut(s) 145, 519
BaeGI GKGCMC 1 cut(s) 853
BaeI ACNNNNGTAYC 2 cut(s) 305, 338
BamHI GGATCC 1 cut(s) 1055
BanI GGYRCC 3 cut(s) 4, 478, 1439
BanII GRGCYC 2 cut(s) 1012, 1069
BbrPI CACGTG 1 cut(s) 246
BbsI GAAGAC 1 cut(s) 798
Bbv12I GWGCWC 2 cut(s) 1012, 1069
BbvI GCAGC 3 cut(s) 246, 916, 1347
BccI CCATC 3 cut(s) 136, 171, 771
BceAI ACGGC 1 cut(s) 234
BciT130I CCWGG 1 cut(s) 1388
BclI TGATCA 2 cut(s) 679, 1270
BcoDI GTCTC 2 cut(s) 646, 726
BfaI CTAG 5 cut(s) 381, 492, 524, 825, 1199
BfmI CTRYAG 1 cut(s) 260
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 449
BisI GCNGC 4 cut(s) 260, 341, 930, 1361
BlsI GCNGC 4 cut(s) 261, 342, 931, 1362
Bme1390I CCNGG 1 cut(s) 1388
Bme18I GGWCC 2 cut(s) 145, 519
BmeT110I CYCGRG 1 cut(s) 470
BmgT120I GGNCC 2 cut(s) 145, 519
BmiI GGNNCC 7 cut(s) 6, 480, 521, 1041, 1057, 1128, 1441
BmrFI CCNGG 1 cut(s) 1388
BmsI GCATC 1 cut(s) 381
BmtI GCTAGC 1 cut(s) 384
BpiI GAAGAC 1 cut(s) 798
BpuEI CTTGAG 1 cut(s) 1361
BsaAI YACGTR 1 cut(s) 246
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 2 cut(s) 471, 1386
BsaWI WCCGGW 1 cut(s) 624
BsaXI ACNNNNNCTCC 2 cut(s) 467, 497
Bsc4I CCNNNNNNNGG 4 cut(s) 177, 529, 566, 904
Bse118I RCCGGY 2 cut(s) 255, 624
Bse3DI GCAATG 1 cut(s) 1309
BseBI CCWGG 1 cut(s) 1388
BseDI CCNNGG 2 cut(s) 471, 1386
BseGI GGATG 1 cut(s) 358
BseLI CCNNNNNNNGG 4 cut(s) 177, 529, 566, 904
BseMI GCAATG 1 cut(s) 1309
BseMII CTCAG 1 cut(s) 1364
BseRI GAGGAG 4 cut(s) 63, 66, 488, 680
BseSI GKGCMC 1 cut(s) 853
BseXI GCAGC 3 cut(s) 246, 916, 1347
Bsh1285I CGRYCG 1 cut(s) 625
BshFI GGCC 1 cut(s) 949
BshNI GGYRCC 3 cut(s) 4, 478, 1439
BshTI ACCGGT 1 cut(s) 624
BsiEI CGRYCG 1 cut(s) 625
BsiHKAI GWGCWC 2 cut(s) 1012, 1069
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 2 cut(s) 256, 625
BslFI GGGAC 1 cut(s) 505
BslI CCNNNNNNNGG 4 cut(s) 177, 529, 566, 904
BsmAI GTCTC 2 cut(s) 646, 726
BsmBI CGTCTC 1 cut(s) 726
BsmFI GGGAC 1 cut(s) 505
BsnI GGCC 1 cut(s) 949
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 1 cut(s) 470
Bsp1286I GDGCHC 3 cut(s) 853, 1012, 1069
Bsp143I GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
BspACI CCGC 3 cut(s) 340, 419, 527
BspANI GGCC 1 cut(s) 949
BspCNI CTCAG 1 cut(s) 1363
BspLI GGNNCC 7 cut(s) 6, 480, 521, 1041, 1057, 1128, 1441
BspMAI CTGCAG 1 cut(s) 264
BspOI GCTAGC 1 cut(s) 384
BspPI GGATC 4 cut(s) 234, 461, 1050, 1063
BspT107I GGYRCC 3 cut(s) 4, 478, 1439
BspTI CTTAAG 1 cut(s) 449
BspTNI GGTCTC 1 cut(s) 646
BsrBI CCGCTC 1 cut(s) 340
BsrDI GCAATG 1 cut(s) 1309
BsrFI RCCGGY 2 cut(s) 255, 624
BssAI RCCGGY 2 cut(s) 255, 624
BssECI CCNNGG 2 cut(s) 471, 1386
BssMI GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
BssNAI GTATAC 1 cut(s) 1181
BssNI GRCGYC 1 cut(s) 5
Bst1107I GTATAC 1 cut(s) 1181
Bst2UI CCWGG 1 cut(s) 1388
Bst4CI ACNGT 7 cut(s) 139, 318, 367, 483, 833, 1185, 1447
Bst6I CTCTTC 2 cut(s) 552, 1151
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 449
BstAPI GCANNNNNTGC 1 cut(s) 996
BstBAI YACGTR 1 cut(s) 246
BstC8I GCNNGC 3 cut(s) 382, 386, 1065
BstDEI CTNAG 8 cut(s) 15, 89, 551, 588, 767, 860, 944, 1350
BstF5I GGATG 1 cut(s) 358
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 1349
BstKTI GATC 7 cut(s) 97, 106, 242, 469, 682, 1058, 1273
BstMAI GTCTC 2 cut(s) 646, 726
BstMBI GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
BstMCI CGRYCG 1 cut(s) 625
BstMWI GCNNNNNNNGC 2 cut(s) 996, 1439
BstNI CCWGG 1 cut(s) 1388
BstSCI CCNGG 1 cut(s) 1386
BstSFI CTRYAG 1 cut(s) 260
BstSLI GKGCMC 1 cut(s) 853
BstV1I GCAGC 3 cut(s) 246, 916, 1347
BstV2I GAAGAC 1 cut(s) 798
BstX2I RGATCY 2 cut(s) 239, 1055
BstYI RGATCY 2 cut(s) 239, 1055
BstZ17I GTATAC 1 cut(s) 1181
BsuRI GGCC 1 cut(s) 949
BtsCI GGATG 1 cut(s) 358
BtsIMutI CAGTG 1 cut(s) 712
Cac8I GCNNGC 3 cut(s) 382, 386, 1065
CfoI GCGC 2 cut(s) 7, 1349
Cfr10I RCCGGY 2 cut(s) 255, 624
Cfr13I GGNCC 2 cut(s) 145, 519
CseI GACGC 1 cut(s) 484
Csp6I GTAC 1 cut(s) 286
CspAI ACCGGT 1 cut(s) 624
CviAII CATG 4 cut(s) 76, 405, 645, 1060
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 8 cut(s) 15, 89, 551, 588, 767, 860, 944, 1350
DinI GGCGCC 1 cut(s) 6
DpnI GATC 7 cut(s) 96, 105, 241, 468, 681, 1057, 1272
DpnII GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
Eam1104I CTCTTC 2 cut(s) 552, 1151
EarI CTCTTC 2 cut(s) 552, 1151
Ecl136II GAGCTC 2 cut(s) 1010, 1067
Eco147I AGGCCT 1 cut(s) 949
Eco24I GRGCYC 2 cut(s) 1012, 1069
Eco31I GGTCTC 1 cut(s) 646
Eco47I GGWCC 2 cut(s) 145, 519
Eco53kI GAGCTC 2 cut(s) 1010, 1067
Eco57I CTGAAG 2 cut(s) 1132, 1298
Eco72I CACGTG 1 cut(s) 246
Eco88I CYCGRG 1 cut(s) 470
EcoICRI GAGCTC 2 cut(s) 1010, 1067
EcoO109I RGGNCCY 1 cut(s) 519
EcoRII CCWGG 1 cut(s) 1386
EcoT38I GRGCYC 2 cut(s) 1012, 1069
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 726
FaeI CATG 4 cut(s) 79, 408, 648, 1063
FaqI GGGAC 1 cut(s) 505
FatI CATG 4 cut(s) 75, 404, 644, 1059
FbaI TGATCA 2 cut(s) 679, 1270
FblI GTMKAC 1 cut(s) 1180
Fnu4HI GCNGC 4 cut(s) 260, 341, 930, 1361
FokI GGATG 1 cut(s) 365
FriOI GRGCYC 2 cut(s) 1012, 1069
Fsp4HI GCNGC 4 cut(s) 260, 341, 930, 1361
FspBI CTAG 5 cut(s) 381, 492, 524, 825, 1199
GlaI GCGC 2 cut(s) 6, 1348
GluI GCNGC 4 cut(s) 260, 341, 930, 1361
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 1 cut(s) 949
HapII CCGG 2 cut(s) 256, 625
HgaI GACGC 1 cut(s) 484
HhaI GCGC 2 cut(s) 7, 1349
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 79, 408, 648, 1063
Hin6I GCGC 2 cut(s) 5, 1347
HinP1I GCGC 2 cut(s) 5, 1347
HinfI GANTC 7 cut(s) 223, 396, 457, 818, 892, 1307, 1391
HpaII CCGG 2 cut(s) 256, 625
HphI GGTGA 4 cut(s) 433, 791, 813, 887
Hpy166II GTNNAC 1 cut(s) 1181
Hpy188I TCNGA 7 cut(s) 585, 726, 917, 1151, 1278, 1353, 1396
Hpy188III TCNNGA 5 cut(s) 101, 470, 677, 1340, 1457
Hpy8I GTNNAC 1 cut(s) 1181
Hpy99I CGWCG 1 cut(s) 232
HpyAV CCTTC 1 cut(s) 1273
HpyCH4III ACNGT 7 cut(s) 139, 318, 367, 483, 833, 1185, 1447
HpyCH4IV ACGT 2 cut(s) 245, 272
HpyF10VI GCNNNNNNNGC 2 cut(s) 996, 1439
HpyF3I CTNAG 8 cut(s) 15, 89, 551, 588, 767, 860, 944, 1350
HpySE526I ACGT 2 cut(s) 245, 272
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 79, 408, 648, 1063
HspAI GCGC 2 cut(s) 5, 1347
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 2 cut(s) 679, 1270
Kzo9I GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
LmnI GCTCC 2 cut(s) 337, 1072
Lsp1109I GCAGC 3 cut(s) 246, 916, 1347
LweI GCATC 1 cut(s) 381
MaeI CTAG 5 cut(s) 381, 492, 524, 825, 1199
MaeII ACGT 2 cut(s) 245, 272
MaeIII GTNAC 3 cut(s) 251, 669, 1402
MalI GATC 7 cut(s) 96, 105, 241, 468, 681, 1057, 1272
MbiI CCGCTC 1 cut(s) 340
MboI GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
MboII GAAGA 4 cut(s) 89, 539, 803, 1138
MfeI CAATTG 2 cut(s) 331, 1317
MflI RGATCY 2 cut(s) 239, 1055
MhlI GDGCHC 3 cut(s) 853, 1012, 1069
MluCI AATT 8 cut(s) 211, 331, 538, 693, 884, 962, 1317, 1354
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 3 cut(s) 390, 451, 1301
MmeI TCCRAC 2 cut(s) 573, 854
MseI TTAA 7 cut(s) 411, 450, 599, 696, 839, 1035, 1415
MslI CAYNNNNRTG 1 cut(s) 800
MspCI CTTAAG 1 cut(s) 449
MspI CCGG 2 cut(s) 256, 625
MspR9I CCNGG 1 cut(s) 1388
MunI CAATTG 2 cut(s) 331, 1317
MvaI CCWGG 1 cut(s) 1388
MwoI GCNNNNNNNGC 2 cut(s) 996, 1439
NarI GGCGCC 1 cut(s) 5
NdeII GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
NheI GCTAGC 1 cut(s) 380
NlaIII CATG 4 cut(s) 79, 408, 648, 1063
NlaIV GGNNCC 7 cut(s) 6, 480, 521, 1041, 1057, 1128, 1441
NmuCI GTSAC 1 cut(s) 251
PceI AGGCCT 1 cut(s) 949
PfeI GAWTC 4 cut(s) 223, 818, 892, 1391
PflMI CCANNNNNTGG 1 cut(s) 177
PinAI ACCGGT 1 cut(s) 624
PkrI GCNGC 4 cut(s) 261, 342, 931, 1362
PleI GAGTC 3 cut(s) 390, 451, 1301
PluTI GGCGCC 1 cut(s) 8
PmaCI CACGTG 1 cut(s) 246
PmlI CACGTG 1 cut(s) 246
PpsI GAGTC 3 cut(s) 390, 451, 1301
Ppu21I YACGTR 1 cut(s) 246
PpuMI RGGWCCY 1 cut(s) 519
PshBI ATTAAT 1 cut(s) 411
Psp124BI GAGCTC 2 cut(s) 1012, 1069
Psp5II RGGWCCY 1 cut(s) 519
Psp6I CCWGG 1 cut(s) 1386
PspCI CACGTG 1 cut(s) 246
PspGI CCWGG 1 cut(s) 1386
PspN4I GGNNCC 7 cut(s) 6, 480, 521, 1041, 1057, 1128, 1441
PspPI GGNCC 2 cut(s) 145, 519
PspPPI RGGWCCY 1 cut(s) 519
PstI CTGCAG 1 cut(s) 264
PsuI RGATCY 2 cut(s) 239, 1055
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 800
SacI GAGCTC 2 cut(s) 1012, 1069
SaqAI TTAA 7 cut(s) 411, 450, 599, 696, 839, 1035, 1415
SatI GCNGC 4 cut(s) 260, 341, 930, 1361
Sau3AI GATC 7 cut(s) 94, 103, 239, 466, 679, 1055, 1270
Sau96I GGNCC 2 cut(s) 145, 519
SchI GAGTC 3 cut(s) 390, 451, 1301
ScrFI CCNGG 1 cut(s) 1388
SduI GDGCHC 3 cut(s) 853, 1012, 1069
SfaNI GCATC 1 cut(s) 381
SfcI CTRYAG 1 cut(s) 260
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 2 cut(s) 145, 519
SmiMI CAYNNNNRTG 1 cut(s) 800
SmlI CTYRAG 2 cut(s) 449, 1340
SmoI CTYRAG 2 cut(s) 449, 1340
Sse9I AATT 8 cut(s) 211, 331, 538, 693, 884, 962, 1317, 1354
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 3 cut(s) 340, 419, 527
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 3 cut(s) 732, 844, 1081
SspMI CTAG 5 cut(s) 381, 492, 524, 825, 1199
SstI GAGCTC 2 cut(s) 1012, 1069
StuI AGGCCT 1 cut(s) 949
StyD4I CCNGG 1 cut(s) 1386
TaaI ACNGT 7 cut(s) 139, 318, 367, 483, 833, 1185, 1447
TaiI ACGT 2 cut(s) 248, 275
TaqI TCGA 2 cut(s) 154, 394
TasI AATT 8 cut(s) 211, 331, 538, 693, 884, 962, 1317, 1354
TauI GCSGC 1 cut(s) 343
TfiI GAWTC 4 cut(s) 223, 818, 892, 1391
Tru1I TTAA 7 cut(s) 411, 450, 599, 696, 839, 1035, 1415
Tru9I TTAA 7 cut(s) 411, 450, 599, 696, 839, 1035, 1415
TscAI CASTG 1 cut(s) 712
TseFI GTSAC 1 cut(s) 251
TseI GCWGC 3 cut(s) 259, 929, 1360
Tsp45I GTSAC 1 cut(s) 251
TspDTI ATGAA 9 cut(s) 284, 369, 375, 551, 649, 905, 969, 975, 1073
TspGWI ACGGA 2 cut(s) 216, 477
TspRI CASTG 1 cut(s) 712
Van91I CCANNNNNTGG 1 cut(s) 177
Vha464I CTTAAG 1 cut(s) 449
VpaK11BI GGWCC 2 cut(s) 145, 519
VspI ATTAAT 1 cut(s) 411
XapI RAATTY 3 cut(s) 211, 538, 1354
XmiI GTMKAC 1 cut(s) 1180
XspI CTAG 5 cut(s) 381, 492, 524, 825, 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.