LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 28 - 65 | 3.5e-09 | F-box domain |
| F-box-like | PF12937 | 28 - 63 | 2.1e-07 | F-box-like |
| LRR_At1g61320_AtMIF1 | PF23622 | 130 - 269 | 2e-06 | At1g61320/AtMIF1, LRR domain |
| LRR_At5g56370 | PF24758 | 134 - 269 | 1.3e-06 | FBD-associated F-box protein At5g56370, LRR repeats |
| LRR_At1g61320_AtMIF1 | PF23622 | 278 - 467 | 8.1e-07 | At1g61320/AtMIF1, LRR domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 453 |
| Acc36I | ACCTGC | 1 cut(s) | 776 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 168 |
| AccBSI | CCGCTC | 1 cut(s) | 628 |
| AccIII | TCCGGA | 1 cut(s) | 91 |
| AciI | CCGC | 1 cut(s) | 628 |
| AclWI | GGATC | 2 cut(s) | 400, 413 |
| AcoI | YGGCCR | 1 cut(s) | 1389 |
| AcsI | RAATTY | 4 cut(s) | 122, 203, 385, 734 |
| AcyI | GRCGYC | 1 cut(s) | 450 |
| AfaI | GTAC | 4 cut(s) | 58, 547, 1094, 1177 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 168, 910 |
| AgsI | TTSAA | 9 cut(s) | 120, 259, 434, 637, 667, 716, 800, 922, 1013 |
| AjnI | CCWGG | 4 cut(s) | 401, 1041, 1263, 1362 |
| AluBI | AGCT | 8 cut(s) | 250, 355, 720, 938, 1034, 1073, 1116, 1303 |
| AluI | AGCT | 8 cut(s) | 250, 355, 720, 938, 1034, 1073, 1116, 1303 |
| Alw21I | GWGCWC | 1 cut(s) | 1398 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| AlwI | GGATC | 2 cut(s) | 400, 413 |
| Aor13HI | TCCGGA | 1 cut(s) | 91 |
| AoxI | GGCC | 1 cut(s) | 1389 |
| ApeKI | GCWGC | 3 cut(s) | 834, 938, 1046 |
| ApoI | RAATTY | 4 cut(s) | 122, 203, 385, 734 |
| AseI | ATTAAT | 1 cut(s) | 747 |
| AspS9I | GGNCC | 1 cut(s) | 50 |
| AsuC2I | CCSGG | 1 cut(s) | 1136 |
| AsuHPI | GGTGA | 8 cut(s) | 56, 277, 391, 445, 700, 800, 819, 893 |
| AvaII | GGWCC | 1 cut(s) | 50 |
| BamHI | GGATCC | 1 cut(s) | 405 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| Bbv12I | GWGCWC | 1 cut(s) | 1398 |
| BbvI | GCAGC | 3 cut(s) | 846, 925, 1033 |
| BccI | CCATC | 5 cut(s) | 162, 202, 329, 499, 1046 |
| BciT130I | CCWGG | 4 cut(s) | 403, 1043, 1265, 1364 |
| BcnI | CCSGG | 1 cut(s) | 1136 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| BfaI | CTAG | 2 cut(s) | 831, 1130 |
| BfmI | CTRYAG | 3 cut(s) | 525, 957, 1407 |
| BfuAI | ACCTGC | 1 cut(s) | 776 |
| BisI | GCNGC | 3 cut(s) | 835, 939, 1047 |
| BlsI | GCNGC | 3 cut(s) | 836, 940, 1048 |
| Bme1390I | CCNGG | 5 cut(s) | 403, 1043, 1136, 1265, 1364 |
| Bme18I | GGWCC | 1 cut(s) | 50 |
| BmgT120I | GGNCC | 1 cut(s) | 50 |
| BmiI | GGNNCC | 4 cut(s) | 52, 407, 477, 954 |
| BmrFI | CCNGG | 5 cut(s) | 403, 1043, 1136, 1265, 1364 |
| BmsI | GCATC | 2 cut(s) | 521, 1245 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| BpmI | CTGGAG | 1 cut(s) | 1385 |
| Bpu10I | CCTNAGC | 1 cut(s) | 251 |
| BpuEI | CTTGAG | 1 cut(s) | 1367 |
| BpuMI | CCSGG | 1 cut(s) | 1136 |
| BsaAI | YACGTR | 1 cut(s) | 545 |
| BsaHI | GRCGYC | 1 cut(s) | 450 |
| BsaJI | CCNNGG | 1 cut(s) | 1446 |
| BsaWI | WCCGGW | 1 cut(s) | 91 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 168, 910 |
| Bse1I | ACTGG | 2 cut(s) | 34, 996 |
| BseAI | TCCGGA | 1 cut(s) | 91 |
| BseBI | CCWGG | 4 cut(s) | 403, 1043, 1265, 1364 |
| BseDI | CCNNGG | 1 cut(s) | 1446 |
| BseGI | GGATG | 5 cut(s) | 340, 676, 1038, 1087, 1294 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 168, 910 |
| BseMII | CTCAG | 2 cut(s) | 1292, 1347 |
| BseNI | ACTGG | 2 cut(s) | 34, 996 |
| BseXI | GCAGC | 3 cut(s) | 846, 925, 1033 |
| BseYI | CCCAGC | 1 cut(s) | 1310 |
| BsgI | GTGCAG | 1 cut(s) | 1024 |
| BshFI | GGCC | 1 cut(s) | 1391 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1398 |
| BsiSI | CCGG | 2 cut(s) | 92, 1136 |
| BslFI | GGGAC | 2 cut(s) | 927, 1118 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 168, 910 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| BsmFI | GGGAC | 2 cut(s) | 927, 1118 |
| BsmI | GAATGC | 5 cut(s) | 274, 418, 1049, 1067, 1357 |
| BsnI | GGCC | 1 cut(s) | 1391 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1398 |
| Bsp13I | TCCGGA | 1 cut(s) | 91 |
| Bsp143I | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| BspACI | CCGC | 1 cut(s) | 628 |
| BspANI | GGCC | 1 cut(s) | 1391 |
| BspCNI | CTCAG | 2 cut(s) | 1291, 1348 |
| BspEI | TCCGGA | 1 cut(s) | 91 |
| BspLI | GGNNCC | 4 cut(s) | 52, 407, 477, 954 |
| BspMI | ACCTGC | 1 cut(s) | 776 |
| BspPI | GGATC | 2 cut(s) | 400, 413 |
| BspQI | GCTCTTC | 1 cut(s) | 345 |
| BsrBI | CCGCTC | 1 cut(s) | 628 |
| BsrI | ACTGG | 2 cut(s) | 34, 996 |
| BssECI | CCNNGG | 1 cut(s) | 1446 |
| BssMI | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| BssNI | GRCGYC | 1 cut(s) | 450 |
| BssT1I | CCWWGG | 1 cut(s) | 1446 |
| Bst2UI | CCWGG | 4 cut(s) | 403, 1043, 1265, 1364 |
| Bst4CI | ACNGT | 3 cut(s) | 61, 344, 550 |
| Bst6I | CTCTTC | 2 cut(s) | 308, 345 |
| BstACI | GRCGYC | 1 cut(s) | 450 |
| BstBAI | YACGTR | 1 cut(s) | 545 |
| BstC8I | GCNNGC | 2 cut(s) | 1067, 1071 |
| BstDEI | CTNAG | 5 cut(s) | 251, 290, 1278, 1304, 1356 |
| BstF5I | GGATG | 5 cut(s) | 340, 676, 1038, 1087, 1294 |
| BstKTI | GATC | 4 cut(s) | 408, 1129, 1437, 1475 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstMBI | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| BstNI | CCWGG | 4 cut(s) | 403, 1043, 1265, 1364 |
| BstNSI | RCATGY | 3 cut(s) | 246, 369, 1069 |
| BstSCI | CCNGG | 5 cut(s) | 401, 1041, 1134, 1263, 1362 |
| BstSFI | CTRYAG | 3 cut(s) | 525, 957, 1407 |
| BstV1I | GCAGC | 3 cut(s) | 846, 925, 1033 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 405 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1447 |
| BstYI | RGATCY | 1 cut(s) | 405 |
| BsuRI | GGCC | 1 cut(s) | 1391 |
| BtgZI | GCGATG | 1 cut(s) | 621 |
| BtsCI | GGATG | 5 cut(s) | 340, 676, 1038, 1087, 1294 |
| BtsI | GCAGTG | 1 cut(s) | 1012 |
| BtsIMutI | CAGTG | 2 cut(s) | 349, 1012 |
| BveI | ACCTGC | 1 cut(s) | 776 |
| Cac8I | GCNNGC | 2 cut(s) | 1067, 1071 |
| Cfr13I | GGNCC | 1 cut(s) | 50 |
| Csp6I | GTAC | 4 cut(s) | 57, 546, 1093, 1176 |
| CviAII | CATG | 3 cut(s) | 243, 366, 1066 |
| CviQI | GTAC | 4 cut(s) | 57, 546, 1093, 1176 |
| DdeI | CTNAG | 5 cut(s) | 251, 290, 1278, 1304, 1356 |
| DpnI | GATC | 4 cut(s) | 407, 1128, 1436, 1474 |
| DpnII | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| EaeI | YGGCCR | 1 cut(s) | 1389 |
| Eam1104I | CTCTTC | 2 cut(s) | 308, 345 |
| EarI | CTCTTC | 2 cut(s) | 308, 345 |
| Eco130I | CCWWGG | 1 cut(s) | 1446 |
| Eco47I | GGWCC | 1 cut(s) | 50 |
| EcoO109I | RGGNCCY | 1 cut(s) | 50 |
| EcoRII | CCWGG | 4 cut(s) | 401, 1041, 1263, 1362 |
| EcoT14I | CCWWGG | 1 cut(s) | 1446 |
| EcoT22I | ATGCAT | 2 cut(s) | 274, 1067 |
| ErhI | CCWWGG | 1 cut(s) | 1446 |
| FaeI | CATG | 3 cut(s) | 246, 369, 1069 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 709, 741 |
| FaqI | GGGAC | 2 cut(s) | 927, 1118 |
| FatI | CATG | 3 cut(s) | 242, 365, 1065 |
| Fnu4HI | GCNGC | 3 cut(s) | 835, 939, 1047 |
| FokI | GGATG | 5 cut(s) | 347, 683, 1025, 1094, 1301 |
| Fsp4HI | GCNGC | 3 cut(s) | 835, 939, 1047 |
| FspBI | CTAG | 2 cut(s) | 831, 1130 |
| GluI | GCNGC | 3 cut(s) | 835, 939, 1047 |
| GsaI | CCCAGC | 1 cut(s) | 1314 |
| GsuI | CTGGAG | 1 cut(s) | 1385 |
| HaeIII | GGCC | 1 cut(s) | 1391 |
| HapII | CCGG | 2 cut(s) | 92, 1136 |
| Hin1I | GRCGYC | 1 cut(s) | 450 |
| Hin1II | CATG | 3 cut(s) | 246, 369, 1069 |
| HpaII | CCGG | 2 cut(s) | 92, 1136 |
| HphI | GGTGA | 8 cut(s) | 56, 277, 391, 445, 700, 800, 819, 893 |
| Hpy166II | GTNNAC | 1 cut(s) | 1176 |
| Hpy188I | TCNGA | 1 cut(s) | 392 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 409, 446, 692 |
| Hpy8I | GTNNAC | 1 cut(s) | 1176 |
| HpyAV | CCTTC | 3 cut(s) | 41, 577, 661 |
| HpyCH4III | ACNGT | 3 cut(s) | 61, 344, 550 |
| HpyCH4IV | ACGT | 2 cut(s) | 450, 544 |
| HpyF3I | CTNAG | 5 cut(s) | 251, 290, 1278, 1304, 1356 |
| HpySE526I | ACGT | 2 cut(s) | 450, 544 |
| Hsp92I | GRCGYC | 1 cut(s) | 450 |
| Hsp92II | CATG | 3 cut(s) | 246, 369, 1069 |
| Kpn2I | TCCGGA | 1 cut(s) | 91 |
| Kzo9I | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| LguI | GCTCTTC | 1 cut(s) | 345 |
| LmnI | GCTCC | 4 cut(s) | 4, 475, 862, 952 |
| Lsp1109I | GCAGC | 3 cut(s) | 846, 925, 1033 |
| LweI | GCATC | 2 cut(s) | 521, 1245 |
| MaeI | CTAG | 2 cut(s) | 831, 1130 |
| MaeII | ACGT | 2 cut(s) | 450, 544 |
| MaeIII | GTNAC | 5 cut(s) | 338, 451, 673, 1291, 1450 |
| MalI | GATC | 4 cut(s) | 407, 1128, 1436, 1474 |
| MbiI | CCGCTC | 1 cut(s) | 628 |
| MboI | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| MboII | GAAGA | 5 cut(s) | 80, 325, 362, 812, 1264 |
| MfeI | CAATTG | 1 cut(s) | 917 |
| MflI | RGATCY | 1 cut(s) | 405 |
| MhlI | GDGCHC | 1 cut(s) | 1398 |
| MmeI | TCCRAC | 1 cut(s) | 205 |
| Mph1103I | ATGCAT | 2 cut(s) | 274, 1067 |
| MroI | TCCGGA | 1 cut(s) | 91 |
| MslI | CAYNNNNRTG | 2 cut(s) | 345, 1401 |
| MspI | CCGG | 2 cut(s) | 92, 1136 |
| MspR9I | CCNGG | 5 cut(s) | 403, 1043, 1136, 1265, 1364 |
| MunI | CAATTG | 1 cut(s) | 917 |
| Mva1269I | GAATGC | 5 cut(s) | 274, 418, 1049, 1067, 1357 |
| MvaI | CCWGG | 4 cut(s) | 403, 1043, 1265, 1364 |
| NciI | CCSGG | 1 cut(s) | 1136 |
| NdeII | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| NlaIII | CATG | 3 cut(s) | 246, 369, 1069 |
| NlaIV | GGNNCC | 4 cut(s) | 52, 407, 477, 954 |
| NmeAIII | GCCGAG | 1 cut(s) | 1417 |
| NmuCI | GTSAC | 2 cut(s) | 338, 451 |
| NsiI | ATGCAT | 2 cut(s) | 274, 1067 |
| NspI | RCATGY | 3 cut(s) | 246, 369, 1069 |
| PaeI | GCATGC | 1 cut(s) | 1069 |
| PciSI | GCTCTTC | 1 cut(s) | 345 |
| PctI | GAATGC | 5 cut(s) | 274, 418, 1049, 1067, 1357 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 168 |
| PkrI | GCNGC | 3 cut(s) | 836, 940, 1048 |
| Ppu21I | YACGTR | 1 cut(s) | 545 |
| PpuMI | RGGWCCY | 1 cut(s) | 50 |
| PshBI | ATTAAT | 1 cut(s) | 747 |
| Psp5II | RGGWCCY | 1 cut(s) | 50 |
| Psp6I | CCWGG | 4 cut(s) | 401, 1041, 1263, 1362 |
| PspFI | CCCAGC | 1 cut(s) | 1310 |
| PspGI | CCWGG | 4 cut(s) | 401, 1041, 1263, 1362 |
| PspN4I | GGNNCC | 4 cut(s) | 52, 407, 477, 954 |
| PspPI | GGNCC | 1 cut(s) | 50 |
| PspPPI | RGGWCCY | 1 cut(s) | 50 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 972, 1004 |
| PsuI | RGATCY | 1 cut(s) | 405 |
| RsaI | GTAC | 4 cut(s) | 58, 547, 1094, 1177 |
| RsaNI | GTAC | 4 cut(s) | 57, 546, 1093, 1176 |
| RseI | CAYNNNNRTG | 2 cut(s) | 345, 1401 |
| SapI | GCTCTTC | 1 cut(s) | 345 |
| SatI | GCNGC | 3 cut(s) | 835, 939, 1047 |
| Sau3AI | GATC | 4 cut(s) | 405, 1126, 1434, 1472 |
| Sau96I | GGNCC | 1 cut(s) | 50 |
| ScrFI | CCNGG | 5 cut(s) | 403, 1043, 1136, 1265, 1364 |
| SduI | GDGCHC | 1 cut(s) | 1398 |
| SfaNI | GCATC | 2 cut(s) | 521, 1245 |
| SfcI | CTRYAG | 3 cut(s) | 525, 957, 1407 |
| SinI | GGWCC | 1 cut(s) | 50 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 345, 1401 |
| SmlI | CTYRAG | 1 cut(s) | 1346 |
| SmoI | CTYRAG | 1 cut(s) | 1346 |
| SphI | GCATGC | 1 cut(s) | 1069 |
| SsiI | CCGC | 1 cut(s) | 628 |
| SspI | AATATT | 1 cut(s) | 1108 |
| SspMI | CTAG | 2 cut(s) | 831, 1130 |
| StyD4I | CCNGG | 5 cut(s) | 401, 1041, 1134, 1263, 1362 |
| StyI | CCWWGG | 1 cut(s) | 1446 |
| TaaI | ACNGT | 3 cut(s) | 61, 344, 550 |
| TaiI | ACGT | 2 cut(s) | 453, 547 |
| TaqI | TCGA | 4 cut(s) | 588, 1075, 1209, 1458 |
| TatI | WGTACW | 2 cut(s) | 56, 1175 |
| TscAI | CASTG | 2 cut(s) | 349, 1012 |
| TseFI | GTSAC | 2 cut(s) | 338, 451 |
| TseI | GCWGC | 3 cut(s) | 834, 938, 1046 |
| Tsp45I | GTSAC | 2 cut(s) | 338, 451 |
| TspDTI | ATGAA | 7 cut(s) | 95, 326, 363, 733, 777, 1044, 1118 |
| TspRI | CASTG | 2 cut(s) | 349, 1012 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 168 |
| VpaK11BI | GGWCC | 1 cut(s) | 50 |
| VspI | ATTAAT | 1 cut(s) | 747 |
| XapI | RAATTY | 4 cut(s) | 122, 203, 385, 734 |
| XceI | RCATGY | 3 cut(s) | 246, 369, 1069 |
| XspI | CTAG | 2 cut(s) | 831, 1130 |
| ZraI | GACGTC | 1 cut(s) | 451 |
| Zsp2I | ATGCAT | 2 cut(s) | 274, 1067 |