F-box LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_At5g56370 | PF24758 | 152 - 320 | 2.3e-08 | FBD-associated F-box protein At5g56370, LRR repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 99 |
| AatII | GACGTC | 1 cut(s) | 638 |
| Acc16I | TGCGCA | 1 cut(s) | 145 |
| AclWI | GGATC | 3 cut(s) | 680, 1183, 1337 |
| AcsI | RAATTY | 6 cut(s) | 582, 922, 950, 1097, 1109, 1222 |
| AcyI | GRCGYC | 1 cut(s) | 635 |
| AfaI | GTAC | 2 cut(s) | 420, 1329 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 943 |
| AgeI | ACCGGT | 1 cut(s) | 282 |
| AjnI | CCWGG | 1 cut(s) | 624 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 960, 992 |
| Alw21I | GWGCWC | 1 cut(s) | 1167 |
| Alw26I | GTCTC | 1 cut(s) | 561 |
| AlwI | GGATC | 3 cut(s) | 680, 1183, 1337 |
| Ama87I | CYCGRG | 1 cut(s) | 814 |
| AoxI | GGCC | 1 cut(s) | 725 |
| ApeKI | GCWGC | 5 cut(s) | 343, 681, 684, 985, 1029 |
| ApoI | RAATTY | 6 cut(s) | 582, 922, 950, 1097, 1109, 1222 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 841, 873 |
| AsiGI | ACCGGT | 1 cut(s) | 282 |
| AspLEI | GCGC | 1 cut(s) | 146 |
| AspS9I | GGNCC | 3 cut(s) | 175, 280, 725 |
| AsuHPI | GGTGA | 4 cut(s) | 59, 730, 830, 926 |
| AvaI | CYCGRG | 1 cut(s) | 814 |
| AvaII | GGWCC | 2 cut(s) | 175, 280 |
| BanII | GRGCYC | 1 cut(s) | 1167 |
| BbsI | GAAGAC | 1 cut(s) | 95 |
| Bbv12I | GWGCWC | 1 cut(s) | 1167 |
| BbvI | GCAGC | 5 cut(s) | 355, 668, 671, 997, 1041 |
| BccI | CCATC | 1 cut(s) | 556 |
| BceAI | ACGGC | 1 cut(s) | 1271 |
| BciT130I | CCWGG | 1 cut(s) | 626 |
| BcoDI | GTCTC | 1 cut(s) | 561 |
| BfaI | CTAG | 4 cut(s) | 33, 443, 789, 1083 |
| BfmI | CTRYAG | 6 cut(s) | 645, 840, 983, 990, 1027, 1145 |
| BisI | GCNGC | 5 cut(s) | 344, 682, 685, 986, 1030 |
| BlsI | GCNGC | 5 cut(s) | 345, 683, 686, 987, 1031 |
| BmcAI | AGTACT | 1 cut(s) | 420 |
| Bme1390I | CCNGG | 1 cut(s) | 626 |
| Bme18I | GGWCC | 2 cut(s) | 175, 280 |
| BmeT110I | CYCGRG | 1 cut(s) | 814 |
| BmgT120I | GGNCC | 3 cut(s) | 175, 280, 725 |
| BmrFI | CCNGG | 1 cut(s) | 626 |
| BmsI | GCATC | 3 cut(s) | 130, 197, 540 |
| BpiI | GAAGAC | 1 cut(s) | 95 |
| BpmI | CTGGAG | 1 cut(s) | 647 |
| BpuEI | CTTGAG | 2 cut(s) | 571, 1229 |
| BsaAI | YACGTR | 1 cut(s) | 1037 |
| BsaHI | GRCGYC | 1 cut(s) | 635 |
| BsaI | GGTCTC | 1 cut(s) | 561 |
| BsaJI | CCNNGG | 1 cut(s) | 1253 |
| BsaWI | WCCGGW | 1 cut(s) | 282 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 46, 76, 620, 650 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 943 |
| Bse118I | RCCGGY | 1 cut(s) | 282 |
| Bse1I | ACTGG | 3 cut(s) | 917, 1007, 1317 |
| Bse3DI | GCAATG | 1 cut(s) | 518 |
| BseBI | CCWGG | 1 cut(s) | 626 |
| BseDI | CCNNGG | 1 cut(s) | 1253 |
| BseGI | GGATG | 2 cut(s) | 266, 1003 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 943 |
| BseMI | GCAATG | 1 cut(s) | 518 |
| BseNI | ACTGG | 3 cut(s) | 917, 1007, 1317 |
| BseXI | GCAGC | 5 cut(s) | 355, 668, 671, 997, 1041 |
| BshFI | GGCC | 1 cut(s) | 727 |
| BshTI | ACCGGT | 1 cut(s) | 282 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1167 |
| BsiHKCI | CYCGRG | 1 cut(s) | 814 |
| BsiSI | CCGG | 1 cut(s) | 283 |
| BslFI | GGGAC | 2 cut(s) | 575, 784 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 943 |
| BsmAI | GTCTC | 1 cut(s) | 561 |
| BsmFI | GGGAC | 2 cut(s) | 575, 784 |
| BsmI | GAATGC | 1 cut(s) | 1258 |
| BsnI | GGCC | 1 cut(s) | 727 |
| Bso31I | GGTCTC | 1 cut(s) | 561 |
| BsoBI | CYCGRG | 1 cut(s) | 814 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1167 |
| Bsp143I | GATC | 3 cut(s) | 672, 1175, 1342 |
| BspANI | GGCC | 1 cut(s) | 727 |
| BspMAI | CTGCAG | 3 cut(s) | 987, 994, 1031 |
| BspPI | GGATC | 3 cut(s) | 680, 1183, 1337 |
| BspTNI | GGTCTC | 1 cut(s) | 561 |
| BsrDI | GCAATG | 1 cut(s) | 518 |
| BsrFI | RCCGGY | 1 cut(s) | 282 |
| BsrI | ACTGG | 3 cut(s) | 917, 1007, 1317 |
| BssAI | RCCGGY | 1 cut(s) | 282 |
| BssECI | CCNNGG | 1 cut(s) | 1253 |
| BssMI | GATC | 3 cut(s) | 672, 1175, 1342 |
| BssNI | GRCGYC | 1 cut(s) | 635 |
| Bst2UI | CCWGG | 1 cut(s) | 626 |
| Bst4CI | ACNGT | 2 cut(s) | 374, 390 |
| BstACI | GRCGYC | 1 cut(s) | 635 |
| BstBAI | YACGTR | 1 cut(s) | 1037 |
| BstC8I | GCNNGC | 2 cut(s) | 990, 1215 |
| BstDEI | CTNAG | 2 cut(s) | 95, 511 |
| BstDSI | CCRYGG | 1 cut(s) | 1253 |
| BstF5I | GGATG | 2 cut(s) | 266, 1003 |
| BstHHI | GCGC | 1 cut(s) | 146 |
| BstKTI | GATC | 3 cut(s) | 675, 1178, 1345 |
| BstMAI | GTCTC | 1 cut(s) | 561 |
| BstMBI | GATC | 3 cut(s) | 672, 1175, 1342 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 690 |
| BstNI | CCWGG | 1 cut(s) | 626 |
| BstNSI | RCATGY | 1 cut(s) | 1217 |
| BstSCI | CCNGG | 1 cut(s) | 624 |
| BstSFI | CTRYAG | 6 cut(s) | 645, 840, 983, 990, 1027, 1145 |
| BstV1I | GCAGC | 5 cut(s) | 355, 668, 671, 997, 1041 |
| BstV2I | GAAGAC | 1 cut(s) | 95 |
| BstX2I | RGATCY | 2 cut(s) | 672, 1175 |
| BstYI | RGATCY | 2 cut(s) | 672, 1175 |
| BsuRI | GGCC | 1 cut(s) | 727 |
| BtgI | CCRYGG | 1 cut(s) | 1253 |
| BtsCI | GGATG | 2 cut(s) | 266, 1003 |
| BtsIMutI | CAGTG | 2 cut(s) | 395, 1310 |
| Cac8I | GCNNGC | 2 cut(s) | 990, 1215 |
| CfoI | GCGC | 1 cut(s) | 146 |
| Cfr10I | RCCGGY | 1 cut(s) | 282 |
| Cfr13I | GGNCC | 3 cut(s) | 175, 280, 725 |
| Csp6I | GTAC | 2 cut(s) | 419, 1328 |
| CspAI | ACCGGT | 1 cut(s) | 282 |
| CviAII | CATG | 5 cut(s) | 141, 360, 539, 678, 1214 |
| CviQI | GTAC | 2 cut(s) | 419, 1328 |
| DdeI | CTNAG | 2 cut(s) | 95, 511 |
| DpnI | GATC | 3 cut(s) | 674, 1177, 1344 |
| DpnII | GATC | 3 cut(s) | 672, 1175, 1342 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 99 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 99 |
| Ecl136II | GAGCTC | 1 cut(s) | 1165 |
| Eco24I | GRGCYC | 1 cut(s) | 1167 |
| Eco31I | GGTCTC | 1 cut(s) | 561 |
| Eco32I | GATATC | 1 cut(s) | 160 |
| Eco47I | GGWCC | 2 cut(s) | 175, 280 |
| Eco53kI | GAGCTC | 1 cut(s) | 1165 |
| Eco88I | CYCGRG | 1 cut(s) | 814 |
| EcoICRI | GAGCTC | 1 cut(s) | 1165 |
| EcoO109I | RGGNCCY | 1 cut(s) | 175 |
| EcoRII | CCWGG | 1 cut(s) | 624 |
| EcoRV | GATATC | 1 cut(s) | 160 |
| EcoT38I | GRGCYC | 1 cut(s) | 1167 |
| FaeI | CATG | 5 cut(s) | 144, 363, 542, 681, 1217 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 739, 771 |
| FaqI | GGGAC | 2 cut(s) | 575, 784 |
| FatI | CATG | 5 cut(s) | 140, 359, 538, 677, 1213 |
| Fnu4HI | GCNGC | 5 cut(s) | 344, 682, 685, 986, 1030 |
| FokI | GGATG | 2 cut(s) | 253, 1010 |
| FriOI | GRGCYC | 1 cut(s) | 1167 |
| Fsp4HI | GCNGC | 5 cut(s) | 344, 682, 685, 986, 1030 |
| FspBI | CTAG | 4 cut(s) | 33, 443, 789, 1083 |
| FspI | TGCGCA | 1 cut(s) | 145 |
| GlaI | GCGC | 1 cut(s) | 145 |
| GluI | GCNGC | 5 cut(s) | 344, 682, 685, 986, 1030 |
| GsuI | CTGGAG | 1 cut(s) | 647 |
| HaeIII | GGCC | 1 cut(s) | 727 |
| HapII | CCGG | 1 cut(s) | 283 |
| HhaI | GCGC | 1 cut(s) | 146 |
| Hin1I | GRCGYC | 1 cut(s) | 635 |
| Hin1II | CATG | 5 cut(s) | 144, 363, 542, 681, 1217 |
| Hin6I | GCGC | 1 cut(s) | 144 |
| HinP1I | GCGC | 1 cut(s) | 144 |
| HincII | GTYRAC | 2 cut(s) | 228, 633 |
| HindII | GTYRAC | 2 cut(s) | 228, 633 |
| HindIII | AAGCTT | 1 cut(s) | 824 |
| HinfI | GANTC | 5 cut(s) | 545, 776, 857, 931, 1185 |
| HpaII | CCGG | 1 cut(s) | 283 |
| HphI | GGTGA | 4 cut(s) | 59, 730, 830, 926 |
| Hpy166II | GTNNAC | 8 cut(s) | 228, 433, 633, 849, 888, 1155, 1246, 1328 |
| Hpy188I | TCNGA | 4 cut(s) | 234, 379, 561, 1264 |
| Hpy188III | TCNNGA | 5 cut(s) | 107, 710, 899, 962, 1208 |
| Hpy8I | GTNNAC | 8 cut(s) | 228, 433, 633, 849, 888, 1155, 1246, 1328 |
| HpyAV | CCTTC | 5 cut(s) | 44, 53, 377, 607, 1166 |
| HpyCH4III | ACNGT | 2 cut(s) | 374, 390 |
| HpyCH4IV | ACGT | 4 cut(s) | 635, 851, 1011, 1036 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 690 |
| HpyF3I | CTNAG | 2 cut(s) | 95, 511 |
| HpySE526I | ACGT | 4 cut(s) | 635, 851, 1011, 1036 |
| Hsp92I | GRCGYC | 1 cut(s) | 635 |
| Hsp92II | CATG | 5 cut(s) | 144, 363, 542, 681, 1217 |
| HspAI | GCGC | 1 cut(s) | 144 |
| Kzo9I | GATC | 3 cut(s) | 672, 1175, 1342 |
| LmnI | GCTCC | 1 cut(s) | 1117 |
| Lsp1109I | GCAGC | 5 cut(s) | 355, 668, 671, 997, 1041 |
| LweI | GCATC | 3 cut(s) | 130, 197, 540 |
| MaeI | CTAG | 4 cut(s) | 33, 443, 789, 1083 |
| MaeII | ACGT | 4 cut(s) | 635, 851, 1011, 1036 |
| MaeIII | GTNAC | 1 cut(s) | 640 |
| MalI | GATC | 3 cut(s) | 674, 1177, 1344 |
| MboI | GATC | 3 cut(s) | 672, 1175, 1342 |
| MboII | GAAGA | 5 cut(s) | 95, 494, 600, 771, 977 |
| MfeI | CAATTG | 2 cut(s) | 688, 1158 |
| MflI | RGATCY | 2 cut(s) | 672, 1175 |
| MhlI | GDGCHC | 1 cut(s) | 1167 |
| MmeI | TCCRAC | 1 cut(s) | 257 |
| MnlI | CCTC | 6 cut(s) | 106, 188, 373, 546, 604, 649 |
| MseI | TTAA | 6 cut(s) | 12, 828, 909, 1074, 1089, 1320 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1263 |
| MspA1I | CMGCKG | 1 cut(s) | 192 |
| MspI | CCGG | 1 cut(s) | 283 |
| MspR9I | CCNGG | 1 cut(s) | 626 |
| MunI | CAATTG | 2 cut(s) | 688, 1158 |
| Mva1269I | GAATGC | 1 cut(s) | 1258 |
| MvaI | CCWGG | 1 cut(s) | 626 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 690 |
| NdeII | GATC | 3 cut(s) | 672, 1175, 1342 |
| NlaIII | CATG | 5 cut(s) | 144, 363, 542, 681, 1217 |
| NsbI | TGCGCA | 1 cut(s) | 145 |
| NspI | RCATGY | 1 cut(s) | 1217 |
| PaeI | GCATGC | 1 cut(s) | 1217 |
| PctI | GAATGC | 1 cut(s) | 1258 |
| PfeI | GAWTC | 5 cut(s) | 545, 776, 857, 931, 1185 |
| PinAI | ACCGGT | 1 cut(s) | 282 |
| PkrI | GCNGC | 5 cut(s) | 345, 683, 686, 987, 1031 |
| Ppu21I | YACGTR | 1 cut(s) | 1037 |
| PpuMI | RGGWCCY | 1 cut(s) | 175 |
| Psp124BI | GAGCTC | 1 cut(s) | 1167 |
| Psp5II | RGGWCCY | 1 cut(s) | 175 |
| Psp6I | CCWGG | 1 cut(s) | 624 |
| PspGI | CCWGG | 1 cut(s) | 624 |
| PspPI | GGNCC | 3 cut(s) | 175, 280, 725 |
| PspPPI | RGGWCCY | 1 cut(s) | 175 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1005, 1037 |
| PstI | CTGCAG | 3 cut(s) | 987, 994, 1031 |
| PsuI | RGATCY | 2 cut(s) | 672, 1175 |
| PvuII | CAGCTG | 1 cut(s) | 192 |
| RsaI | GTAC | 2 cut(s) | 420, 1329 |
| RsaNI | GTAC | 2 cut(s) | 419, 1328 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1263 |
| SacI | GAGCTC | 1 cut(s) | 1167 |
| SaqAI | TTAA | 6 cut(s) | 12, 828, 909, 1074, 1089, 1320 |
| SatI | GCNGC | 5 cut(s) | 344, 682, 685, 986, 1030 |
| Sau3AI | GATC | 3 cut(s) | 672, 1175, 1342 |
| Sau96I | GGNCC | 3 cut(s) | 175, 280, 725 |
| SbfI | CCTGCAGG | 1 cut(s) | 994 |
| ScaI | AGTACT | 1 cut(s) | 420 |
| ScrFI | CCNGG | 1 cut(s) | 626 |
| SdaI | CCTGCAGG | 1 cut(s) | 994 |
| SduI | GDGCHC | 1 cut(s) | 1167 |
| SfaNI | GCATC | 3 cut(s) | 130, 197, 540 |
| SfcI | CTRYAG | 6 cut(s) | 645, 840, 983, 990, 1027, 1145 |
| SinI | GGWCC | 2 cut(s) | 175, 280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1263 |
| SmlI | CTYRAG | 2 cut(s) | 550, 1208 |
| SmoI | CTYRAG | 2 cut(s) | 550, 1208 |
| SphI | GCATGC | 1 cut(s) | 1217 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 994 |
| SspMI | CTAG | 4 cut(s) | 33, 443, 789, 1083 |
| SstI | GAGCTC | 1 cut(s) | 1167 |
| StyD4I | CCNGG | 1 cut(s) | 624 |
| TaaI | ACNGT | 2 cut(s) | 374, 390 |
| TaiI | ACGT | 4 cut(s) | 638, 854, 1014, 1039 |
| TaqI | TCGA | 3 cut(s) | 200, 415, 1188 |
| TatI | WGTACW | 1 cut(s) | 418 |
| TfiI | GAWTC | 5 cut(s) | 545, 776, 857, 931, 1185 |
| Tru1I | TTAA | 6 cut(s) | 12, 828, 909, 1074, 1089, 1320 |
| Tru9I | TTAA | 6 cut(s) | 12, 828, 909, 1074, 1089, 1320 |
| TscAI | CASTG | 2 cut(s) | 395, 1317 |
| TseI | GCWGC | 5 cut(s) | 343, 681, 684, 985, 1029 |
| TspDTI | ATGAA | 4 cut(s) | 348, 357, 527, 944 |
| TspGWI | ACGGA | 2 cut(s) | 246, 1076 |
| TspRI | CASTG | 2 cut(s) | 395, 1317 |
| VpaK11BI | GGWCC | 2 cut(s) | 175, 280 |
| XapI | RAATTY | 6 cut(s) | 582, 922, 950, 1097, 1109, 1222 |
| XceI | RCATGY | 1 cut(s) | 1217 |
| XspI | CTAG | 4 cut(s) | 33, 443, 789, 1083 |
| ZraI | GACGTC | 1 cut(s) | 636 |
| ZrmI | AGTACT | 1 cut(s) | 420 |