MD14G1026700.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000241
Physical Location & Seq
Forward (+)
2436366 .. 2438175
1810 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1026700.v1.1.491

Sequence Viewer

Length: 1677 bp
ATGGAGCATAAGTTAGTGGCCAGTGCAAGTTCTCGAGGTCAACGAGTGTGTGCGATTGAGAGTAAAATGATCGACAGATTGAGTAATCTTCCAGATGAAATTGCCCAGCACATTTTTTCCTTCCTTGATTTGAAAGACATGGCACGACTCGGATGCATGTCCAAAAGATACAGAAAATTTCATCTGTCATCTCCGTCGTTGGAAATTAATATTAATGAAATCCCTAACCAGAAGATGAAGAAATGCTCCTGCAATATGCGGTTACAGTTGATATATTCCTTGGACAGGTATTTATTTCGTCGTGGAGATAATAAAATAAAACGCTTTCATATTCGTTGGGTTACTCACAACCGCTTCACTAAAGACTGTGCGTGTGATGAGAGATTCCGTATCATAGCGTGGGTCTACAATGCAATAAGGTGTAATGTTGAAGAACTTGATCTTGATGTTTCACTACCCAGGGAGACACCATTAGCATTATCATCTTTCATGTTTCTTTGTAAATCTTTGACGTCTCTATCAGTGAGCATGAAGTGTGTTCTTAAAGGACCTCCCCTTGATTCGTCCTCTAACCTGAAATACCTGAGTCTGAGAGAAGTCTGTATTGTGGACGAGAAGTTTTTCACATGGATCACATGTTGCTGCAAATGCATTAAGGAATTCCGTCTTCAAGATATTTACGGGGTAGCAAATATCACCATCGAAAGCTCTTCTCTGGAATCATTTGTTTTTGAGTGTCCCGGTTTGAGTGCTGGCTGCAATCTCAACATATCAGGACAGAAACTTGAATGCTTACACATCCGTTGGGGAAATCTCTTCTTTGACCAAAAATCGTCGCTAAATATTTCTGCTCCAAATCTTAAATCTTTAACTTGGTGGGGGACTTTGTTTTCTCACCAAAATCTTGGGAAGTTGATGTGTTTAGAGAAAGCTGAGCTTTCTTTACAGCCTGAATCTGGAATAGATTTCAGCATCATACATAAGGTTCTTCACAGCATGCGCGGCGTTAAAGTTCTCATTCTACACAAAAAGATCACCATGGCACTGTTAAAAGAAGGTTCCATAGCACTAGCAGCACTATTTGGTACCGAGATTAGTTATCTGCAAATGCATATAGAGTGCTTGTTCGATAATCTGGTTCCGGCAATGGTCTCTCTTTTAAGTGGAATGCCTAAACTGAAGACTTTGTACCTGAAGACTGACCAATTCTCCTTCTCCCCTGAATATAAAGTAAGTAATAGGTCCGCACTCTCAATGCATTTTTCCATCTGTGTTTTCTTAATTTTCAGCAACTTTTTAGCTGATTTTTTTTGTCACGCGCTGTGTTGCCTTTTTCAGTCATCTGGGTTTGGTATGGCATACTGGAAATCGCAAAAACTTGCTTTTATTAATCAGGTTAAGGTGGTGTCCATTGAGCTTTGCAGTGGGTCCAATGGATTTGAGCTAGCAAGGTATATCCTCGAGCATGCTCAGAACTTGAACAAACTGGAAATCATTCATTCTGCTGAGCAATCTAATGCTATAAGGGAGTTAAACGAAAGCAAGAGGGTTTCAAACGCCGCATTTGTCTTTGAGGAAGATCGACAAAGAGGGACAAGAAAACAAGGTACCCCTGCATTCTGGTCGTTTGCCCAAATGCTGCGGGGGCCTTGTTCTATCGACTCGATTCGTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

559

Amino Acids

63.7

Weight (kDa)

8.92

Isoelectric Point (pI)

51.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 27 - 60 1.1e-07 F-box-like
F-box PF00646 27 - 59 6.7e-07 F-box domain
LRR_At5g56370 PF24758 133 - 312 8.5e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000241)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g18954 FvH4_6g18982 FvH4_6g19010 FvH4_6g19020 FvH4_6g19020 FvH4_6g19030 FvH4_6g19030 FvH4_6g19040 FvH4_6g19040 FvH4_6g19040 FvH4_6g19051 FvH4_6g19090 FvH4_6g19090 FvH4_6g19090 FvH4_6g33920 FvH4_6g33940
malus_domestica MD00G1221800.v1.1 MD04G1145400.v1.1 MD12G1026400.v1.1 MD12G1026500.v1.1 MD12G1026700.v1.1 MD12G1026800.v1.1 MD14G1024900.v1.1 MD14G1025000.v1.1 MD14G1025100.v1.1 MD14G1025200.v1.1 MD14G1025300.v1.1 MD14G1025400.v1.1 MD14G1025600.v1.1 MD14G1026200.v1.1 MD14G1026700.v1.1
prunus_persica Prupe.7G104800_v2.0.a1 Prupe.7G104900_v2.0.a1 Prupe.7G105000_v2.0.a1 Prupe.7G105500_v2.0.a1 Prupe.7G105500_v2.0.a1 Prupe.7G105600_v2.0.a1 Prupe.7G105900_v2.0.a1 Prupe.7G106200_v2.0.a1
pyrus_communis pycom04g13160 pycom07g14430 pycom12g02570 pycom14g02380 pycom14g02430 pycom14g02470 pycom14g02480 pycom14g02490
rosa_chinensis RchiOBHm_Chr3g0474001 RchiOBHm_Chr3g0474011 RchiOBHm_Chr3g0474021 RchiOBHm_Chr3g0474031 RchiOBHm_Chr3g0474041 RchiOBHm_Chr3g0474111 RchiOBHm_Chr3g0474131 RchiOBHm_Chr3g0474161 RchiOBHm_Chr3g0474191
rosa_laevigata RLG00000023848 RLG00000023942 RLG00000023944 RLG00000023946 RLG00000023948 RLG00000023956 RLG00000023957 RLG00000023958
rosa_multiflora Rmu_co8028860.1_g000001 Rmu_sc0002414.1_g000007 Rmu_sc0003170.1_g000008 Rmu_sc0003170.1_g000009 Rmu_sc0004167.1_g000001 Rmu_sc0004507.1_g000023 Rmu_sc0004507.1_g000029 Rmu_sc0004507.1_g000030 Rmu_sc0004507.1_g000032 Rmu_sc0004507.1_g000045 Rmu_sc0005137.1_g000004 Rmu_sc0015051.1_g000002 Rmu_sc0027615.1_g000001 Rmu_sc0027615.1_g000002
rosa_roxburghii Rroxscaffold_6G00407440 Rroxscaffold_6G00407450 Rroxscaffold_6G00407470 Rroxscaffold_6G00407550 Rroxscaffold_6G00407560 Rroxscaffold_6G00407570
rosa_rugosa Rorug03G0137600 Rorug03G0137600 Rorug03G0137600 Rorug03G0138800 Rorug03G0138900 Rorug03G0139200 Rorug03G0139300 Rorug03G0139300 Rorug03G0139400 Rorug03G0139500
rosa_samantha Rh3AG187700 Rh3AG187800 Rh3AG187900 Rh3AG188000 Rh3AG188100 Rh3AG188700 Rh3AG188900 Rh3AG189100 Rh3AG189200 Rh3AG189800 Rh3BG216500 Rh3BG216600 Rh3BG216700 Rh3BG216800 Rh3BG216900 Rh3BG218300 Rh3BG218500 Rh3BG219000 Rh3CG212900 Rh3CG213000 Rh3CG213100 Rh3CG213200 Rh3CG214000 Rh3CG214200 Rh3CG214400 Rh3CG222800 Rh3DG212300 Rh3DG212400 Rh3DG212500 Rh3DG212600 Rh3DG212700 Rh3DG213200 Rh3DG213500 Rh3DG213700 Rh3DG213800 Rh3DG214400 Rh3DG214500 Rh3DG223800
rosa_wichuraiana Rw3G017170 Rw3G017200 Rw3G017210 Rw3G017220 Rw3G017230 Rw3G017290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 515
Acc65I GGTACC 2 cut(s) 1085, 1607
AccB1I GGYRCC 2 cut(s) 1085, 1607
AccI GTMKAC 1 cut(s) 405
AccII CGCG 2 cut(s) 1002, 1319
AciI CCGC 6 cut(s) 259, 352, 1002, 1245, 1560, 1642
AclWI GGATC 1 cut(s) 638
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 2 cut(s) 176, 659
AcuI CTGAAG 2 cut(s) 1199, 1214
AcyI GRCGYC 1 cut(s) 512
AfaI GTAC 3 cut(s) 1087, 1190, 1609
AfiI CCNNNNNNNGG 2 cut(s) 285, 956
AflIII ACRYGT 1 cut(s) 635
AgsI TTSAA 6 cut(s) 133, 431, 671, 788, 1480, 1554
AjnI CCWGG 1 cut(s) 458
AluBI AGCT 6 cut(s) 708, 932, 937, 1301, 1417, 1444
AluI AGCT 6 cut(s) 708, 932, 937, 1301, 1417, 1444
Alw26I GTCTC 3 cut(s) 458, 519, 1156
AlwI GGATC 1 cut(s) 638
Ama87I CYCGRG 2 cut(s) 33, 1460
AoxI GGCC 2 cut(s) 18, 1646
ApeKI GCWGC 4 cut(s) 642, 756, 1073, 1639
ApoI RAATTY 2 cut(s) 176, 659
AseI ATTAAT 3 cut(s) 207, 213, 1389
Asp700I GAANNNNTTC 2 cut(s) 620, 1494
Asp718I GGTACC 2 cut(s) 1085, 1607
AspLEI GCGC 2 cut(s) 1002, 1321
AspS9I GGNCC 4 cut(s) 548, 1242, 1428, 1646
AsuC2I CCSGG 1 cut(s) 741
AsuHPI GGTGA 3 cut(s) 688, 887, 1027
AsuNHI GCTAGC 1 cut(s) 1444
AvaI CYCGRG 2 cut(s) 33, 1460
AvaII GGWCC 3 cut(s) 548, 1242, 1428
BalI TGGCCA 1 cut(s) 20
BanI GGYRCC 2 cut(s) 1085, 1607
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
BbsI GAAGAC 3 cut(s) 659, 1187, 1202
BbvI GCAGC 4 cut(s) 629, 743, 1085, 1626
BccI CCATC 2 cut(s) 707, 1274
BcgI CGANNNNNNTGC 4 cut(s) 135, 169, 1605, 1639
BciT130I CCWGG 1 cut(s) 460
BcnI CCSGG 1 cut(s) 741
BcoDI GTCTC 3 cut(s) 458, 519, 1156
BfaI CTAG 2 cut(s) 1070, 1445
BisI GCNGC 6 cut(s) 643, 757, 1003, 1074, 1560, 1640
BlpI GCTNAGC 2 cut(s) 933, 1506
BlsI GCNGC 6 cut(s) 644, 758, 1004, 1075, 1561, 1641
Bme1390I CCNGG 2 cut(s) 460, 741
Bme18I GGWCC 3 cut(s) 548, 1242, 1428
BmeT110I CYCGRG 2 cut(s) 33, 1460
BmgT120I GGNCC 4 cut(s) 548, 1242, 1428, 1646
BmiI GGNNCC 6 cut(s) 1060, 1087, 1140, 1429, 1609, 1647
BmrFI CCNGG 2 cut(s) 460, 741
BmsI GCATC 2 cut(s) 143, 981
BmtI GCTAGC 1 cut(s) 1448
BpiI GAAGAC 3 cut(s) 659, 1187, 1202
Bpu1102I GCTNAGC 2 cut(s) 933, 1506
BpuMI CCSGG 1 cut(s) 741
BsaHI GRCGYC 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 1156
BsaJI CCNNGG 4 cut(s) 279, 458, 459, 1038
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1193, 1223
Bsc4I CCNNNNNNNGG 2 cut(s) 285, 956
Bse1I ACTGG 3 cut(s) 21, 1367, 1491
Bse3DI GCAATG 1 cut(s) 1152
BseBI CCWGG 1 cut(s) 460
BseDI CCNNGG 4 cut(s) 279, 458, 459, 1038
BseGI GGATG 2 cut(s) 158, 798
BseLI CCNNNNNNNGG 2 cut(s) 285, 956
BseMI GCAATG 1 cut(s) 1152
BseMII CTCAG 5 cut(s) 575, 581, 924, 1484, 1497
BseNI ACTGG 3 cut(s) 21, 1367, 1491
BseXI GCAGC 4 cut(s) 629, 743, 1085, 1626
BseYI CCCAGC 1 cut(s) 105
Bsh1236I CGCG 2 cut(s) 1002, 1319
BshFI GGCC 2 cut(s) 20, 1648
BshNI GGYRCC 2 cut(s) 1085, 1607
BsiHKCI CYCGRG 2 cut(s) 33, 1460
BsiSI CCGG 2 cut(s) 741, 1142
BslFI GGGAC 3 cut(s) 723, 895, 1606
BslI CCNNNNNNNGG 2 cut(s) 285, 956
BsmAI GTCTC 3 cut(s) 458, 519, 1156
BsmBI CGTCTC 1 cut(s) 519
BsmFI GGGAC 3 cut(s) 723, 895, 1606
BsmI GAATGC 3 cut(s) 794, 1173, 1616
BsnI GGCC 2 cut(s) 20, 1648
Bso31I GGTCTC 1 cut(s) 1156
BsoBI CYCGRG 2 cut(s) 33, 1460
Bsp143I GATC 5 cut(s) 69, 439, 630, 1032, 1579
Bsp1720I GCTNAGC 2 cut(s) 933, 1506
Bsp19I CCATGG 1 cut(s) 1038
BspACI CCGC 6 cut(s) 259, 352, 1002, 1245, 1560, 1642
BspANI GGCC 2 cut(s) 20, 1648
BspCNI CTCAG 5 cut(s) 576, 582, 925, 1483, 1498
BspFNI CGCG 2 cut(s) 1002, 1319
BspLI GGNNCC 6 cut(s) 1060, 1087, 1140, 1429, 1609, 1647
BspOI GCTAGC 1 cut(s) 1448
BspPI GGATC 1 cut(s) 638
BspQI GCTCTTC 1 cut(s) 715
BspT107I GGYRCC 2 cut(s) 1085, 1607
BspTNI GGTCTC 1 cut(s) 1156
BsrDI GCAATG 1 cut(s) 1152
BsrI ACTGG 3 cut(s) 21, 1367, 1491
BssECI CCNNGG 4 cut(s) 279, 458, 459, 1038
BssMI GATC 5 cut(s) 69, 439, 630, 1032, 1579
BssNI GRCGYC 1 cut(s) 512
BssT1I CCWWGG 2 cut(s) 279, 1038
Bst2UI CCWGG 1 cut(s) 460
Bst4CI ACNGT 3 cut(s) 267, 368, 1047
Bst6I CTCTTC 2 cut(s) 715, 821
BstACI GRCGYC 1 cut(s) 512
BstC8I GCNNGC 4 cut(s) 754, 998, 1446, 1467
BstDEI CTNAG 5 cut(s) 584, 590, 933, 1470, 1506
BstDSI CCRYGG 1 cut(s) 1038
BstENI CCTNNNNNAGG 1 cut(s) 283
BstF5I GGATG 2 cut(s) 158, 798
BstFNI CGCG 2 cut(s) 1002, 1319
BstHHI GCGC 2 cut(s) 1002, 1321
BstKTI GATC 5 cut(s) 72, 442, 633, 1035, 1582
BstMAI GTCTC 3 cut(s) 458, 519, 1156
BstMBI GATC 5 cut(s) 69, 439, 630, 1032, 1579
BstMWI GCNNNNNNNGC 4 cut(s) 648, 1002, 1073, 1645
BstNI CCWGG 1 cut(s) 460
BstNSI RCATGY 4 cut(s) 160, 639, 1000, 1469
BstSCI CCNGG 2 cut(s) 458, 739
BstUI CGCG 2 cut(s) 1002, 1319
BstV1I GCAGC 4 cut(s) 629, 743, 1085, 1626
BstV2I GAAGAC 3 cut(s) 659, 1187, 1202
BstXI CCANNNNNNTGG 1 cut(s) 905
BsuRI GGCC 2 cut(s) 20, 1648
BtgI CCRYGG 1 cut(s) 1038
BtsCI GGATG 2 cut(s) 158, 798
BtsI GCAGTG 1 cut(s) 1429
BtsIMutI CAGTG 4 cut(s) 28, 528, 1043, 1429
Cac8I GCNNGC 4 cut(s) 754, 998, 1446, 1467
CfoI GCGC 2 cut(s) 1002, 1321
Cfr13I GGNCC 4 cut(s) 548, 1242, 1428, 1646
Csp6I GTAC 3 cut(s) 1086, 1189, 1608
CviAII CATG 9 cut(s) 139, 157, 490, 529, 627, 636, 997, 1039, 1466
CviQI GTAC 3 cut(s) 1086, 1189, 1608
DdeI CTNAG 5 cut(s) 584, 590, 933, 1470, 1506
DpnI GATC 5 cut(s) 71, 441, 632, 1034, 1581
DpnII GATC 5 cut(s) 69, 439, 630, 1032, 1579
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 2 cut(s) 715, 821
EarI CTCTTC 2 cut(s) 715, 821
Eco130I CCWWGG 2 cut(s) 279, 1038
Eco31I GGTCTC 1 cut(s) 1156
Eco47I GGWCC 3 cut(s) 548, 1242, 1428
Eco57I CTGAAG 2 cut(s) 1199, 1214
Eco88I CYCGRG 2 cut(s) 33, 1460
EcoNI CCTNNNNNAGG 1 cut(s) 283
EcoO109I RGGNCCY 2 cut(s) 548, 1646
EcoRI GAATTC 1 cut(s) 659
EcoRII CCWGG 1 cut(s) 458
EcoT14I CCWWGG 2 cut(s) 279, 1038
EcoT22I ATGCAT 4 cut(s) 158, 653, 1113, 1260
ErhI CCWWGG 2 cut(s) 279, 1038
Esp3I CGTCTC 1 cut(s) 519
FaeI CATG 9 cut(s) 142, 160, 493, 532, 630, 639, 1000, 1042, 1469
FalI AAGNNNNNCTT 2 cut(s) 921, 953
FaqI GGGAC 3 cut(s) 723, 895, 1606
FatI CATG 9 cut(s) 138, 156, 489, 528, 626, 635, 996, 1038, 1465
FauI CCCGC 1 cut(s) 1635
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 643, 757, 1003, 1074, 1560, 1640
FokI GGATG 2 cut(s) 165, 785
Fsp4HI GCNGC 6 cut(s) 643, 757, 1003, 1074, 1560, 1640
FspBI CTAG 2 cut(s) 1070, 1445
GlaI GCGC 2 cut(s) 1001, 1320
GluI GCNGC 6 cut(s) 643, 757, 1003, 1074, 1560, 1640
GsaI CCCAGC 1 cut(s) 109
HaeIII GGCC 2 cut(s) 20, 1648
HapII CCGG 2 cut(s) 741, 1142
HhaI GCGC 2 cut(s) 1002, 1321
Hin1I GRCGYC 1 cut(s) 512
Hin1II CATG 9 cut(s) 142, 160, 493, 532, 630, 639, 1000, 1042, 1469
Hin6I GCGC 2 cut(s) 1000, 1319
HinP1I GCGC 2 cut(s) 1000, 1319
HincII GTYRAC 1 cut(s) 41
HindII GTYRAC 1 cut(s) 41
HinfI GANTC 8 cut(s) 147, 384, 560, 586, 719, 953, 1661, 1666
HpaII CCGG 2 cut(s) 741, 1142
HphI GGTGA 3 cut(s) 688, 887, 1027
Hpy166II GTNNAC 3 cut(s) 41, 406, 610
Hpy188I TCNGA 3 cut(s) 152, 591, 1473
Hpy188III TCNNGA 7 cut(s) 33, 92, 443, 671, 716, 774, 957
Hpy8I GTNNAC 3 cut(s) 41, 406, 610
Hpy99I CGWCG 3 cut(s) 199, 303, 838
HpyAV CCTTC 3 cut(s) 130, 1049, 1222
HpyCH4III ACNGT 3 cut(s) 267, 368, 1047
HpyCH4IV ACGT 1 cut(s) 512
HpyF10VI GCNNNNNNNGC 4 cut(s) 648, 1002, 1073, 1645
HpyF3I CTNAG 5 cut(s) 584, 590, 933, 1470, 1506
HpySE526I ACGT 1 cut(s) 512
Hsp92I GRCGYC 1 cut(s) 512
Hsp92II CATG 9 cut(s) 142, 160, 493, 532, 630, 639, 1000, 1042, 1469
HspAI GCGC 2 cut(s) 1000, 1319
KpnI GGTACC 2 cut(s) 1089, 1611
Kzo9I GATC 5 cut(s) 69, 439, 630, 1032, 1579
LguI GCTCTTC 1 cut(s) 715
LmnI GCTCC 3 cut(s) 4, 251, 856
Lsp1109I GCAGC 4 cut(s) 629, 743, 1085, 1626
LweI GCATC 2 cut(s) 143, 981
MaeI CTAG 2 cut(s) 1070, 1445
MaeII ACGT 1 cut(s) 512
MaeIII GTNAC 3 cut(s) 261, 340, 1313
MalI GATC 5 cut(s) 71, 441, 632, 1034, 1581
MboI GATC 5 cut(s) 69, 439, 630, 1032, 1579
MlsI TGGCCA 1 cut(s) 20
MluCI AATT 6 cut(s) 99, 176, 204, 659, 1205, 1281
MluNI TGGCCA 1 cut(s) 20
MlyI GAGTC 3 cut(s) 141, 595, 1655
MmeI TCCRAC 1 cut(s) 180
MnlI CCTC 7 cut(s) 29, 561, 577, 1469, 1539, 1567, 1583
Mox20I TGGCCA 1 cut(s) 20
Mph1103I ATGCAT 4 cut(s) 158, 653, 1113, 1260
MroXI GAANNNNTTC 2 cut(s) 620, 1494
MscI TGGCCA 1 cut(s) 20
Msp20I TGGCCA 1 cut(s) 20
MspI CCGG 2 cut(s) 741, 1142
MspR9I CCNGG 2 cut(s) 460, 741
Mva1269I GAATGC 3 cut(s) 794, 1173, 1616
MvaI CCWGG 1 cut(s) 460
MvnI CGCG 2 cut(s) 1002, 1319
MwoI GCNNNNNNNGC 4 cut(s) 648, 1002, 1073, 1645
NciI CCSGG 1 cut(s) 741
NcoI CCATGG 1 cut(s) 1038
NdeII GATC 5 cut(s) 69, 439, 630, 1032, 1579
NheI GCTAGC 1 cut(s) 1444
NlaIII CATG 9 cut(s) 142, 160, 493, 532, 630, 639, 1000, 1042, 1469
NlaIV GGNNCC 6 cut(s) 1060, 1087, 1140, 1429, 1609, 1647
NmuCI GTSAC 1 cut(s) 1313
NsiI ATGCAT 4 cut(s) 158, 653, 1113, 1260
NspI RCATGY 4 cut(s) 160, 639, 1000, 1469
PaeI GCATGC 2 cut(s) 1000, 1469
PaeR7I CTCGAG 2 cut(s) 33, 1460
PasI CCCWGGG 1 cut(s) 459
PciI ACATGT 1 cut(s) 635
PciSI GCTCTTC 1 cut(s) 715
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 3 cut(s) 794, 1173, 1616
PdmI GAANNNNTTC 2 cut(s) 620, 1494
PfeI GAWTC 5 cut(s) 384, 560, 719, 953, 1666
PkrI GCNGC 6 cut(s) 644, 758, 1004, 1075, 1561, 1641
PleI GAGTC 3 cut(s) 141, 594, 1655
PpsI GAGTC 3 cut(s) 141, 594, 1655
PpuMI RGGWCCY 1 cut(s) 548
PscI ACATGT 1 cut(s) 635
PshBI ATTAAT 3 cut(s) 207, 213, 1389
Psp5II RGGWCCY 1 cut(s) 548
Psp6I CCWGG 1 cut(s) 458
PspFI CCCAGC 1 cut(s) 105
PspGI CCWGG 1 cut(s) 458
PspN4I GGNNCC 6 cut(s) 1060, 1087, 1140, 1429, 1609, 1647
PspPI GGNCC 4 cut(s) 548, 1242, 1428, 1646
PspPPI RGGWCCY 1 cut(s) 548
PspXI VCTCGAGB 1 cut(s) 1460
RsaI GTAC 3 cut(s) 1087, 1190, 1609
RsaNI GTAC 3 cut(s) 1086, 1189, 1608
SapI GCTCTTC 1 cut(s) 715
SatI GCNGC 6 cut(s) 643, 757, 1003, 1074, 1560, 1640
Sau3AI GATC 5 cut(s) 69, 439, 630, 1032, 1579
Sau96I GGNCC 4 cut(s) 548, 1242, 1428, 1646
SchI GAGTC 3 cut(s) 141, 595, 1655
ScrFI CCNGG 2 cut(s) 460, 741
SfaNI GCATC 2 cut(s) 143, 981
Sfr274I CTCGAG 2 cut(s) 33, 1460
SinI GGWCC 3 cut(s) 548, 1242, 1428
SlaI CTCGAG 2 cut(s) 33, 1460
SmlI CTYRAG 2 cut(s) 33, 1460
SmoI CTYRAG 2 cut(s) 33, 1460
SphI GCATGC 2 cut(s) 1000, 1469
Sse9I AATT 6 cut(s) 99, 176, 204, 659, 1205, 1281
SsiI CCGC 6 cut(s) 259, 352, 1002, 1245, 1560, 1642
SspI AATATT 2 cut(s) 211, 844
SspMI CTAG 2 cut(s) 1070, 1445
StyD4I CCNGG 2 cut(s) 458, 739
StyI CCWWGG 2 cut(s) 279, 1038
TaaI ACNGT 3 cut(s) 267, 368, 1047
TaiI ACGT 1 cut(s) 515
TaqI TCGA 8 cut(s) 34, 72, 702, 1128, 1461, 1582, 1659, 1664
TasI AATT 6 cut(s) 99, 176, 204, 659, 1205, 1281
TauI GCSGC 2 cut(s) 1005, 1562
TfiI GAWTC 5 cut(s) 384, 560, 719, 953, 1666
TscAI CASTG 4 cut(s) 28, 528, 1050, 1429
TseFI GTSAC 1 cut(s) 1313
TseI GCWGC 4 cut(s) 642, 756, 1073, 1639
Tsp45I GTSAC 1 cut(s) 1313
TspDTI ATGAA 8 cut(s) 111, 170, 231, 251, 317, 478, 545, 1487
TspGWI ACGGA 4 cut(s) 183, 377, 653, 791
TspRI CASTG 4 cut(s) 28, 528, 1050, 1429
VpaK11BI GGWCC 3 cut(s) 548, 1242, 1428
VspI ATTAAT 3 cut(s) 207, 213, 1389
XagI CCTNNNNNAGG 1 cut(s) 283
XapI RAATTY 2 cut(s) 176, 659
XceI RCATGY 4 cut(s) 160, 639, 1000, 1469
XhoI CTCGAG 2 cut(s) 33, 1460
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 2 cut(s) 620, 1494
XspI CTAG 2 cut(s) 1070, 1445
ZraI GACGTC 1 cut(s) 513
Zsp2I ATGCAT 4 cut(s) 158, 653, 1113, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.