Prupe.1G338900_v2.0.a1

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
31911759 .. 31911989
231 bp
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UTR
Exon/CDS
Intron
Prupe.1G338900.1

Sequence Viewer

Length: 231 bp
ATGAAGGTTTGTCTGAGATGGGTATACGAGCAAGGGGTGAGTTTGGTGGTGAAGAGCTTCAATAAGGACAGCATCCAAGAAAATATTGGCATATTTGATTTGGAGTTGAGTCCTCAGGAATTGGATAACATCAATCGAATTCCACAAAACAGAGGATTTCCGGCAATCAACTTCATTGCAGATGAAGGCCCTTACAAGTCTCTTCACGAGCTTTGGGATGGAGAGATTTAA

Protein Analysis

77

Amino Acids

8.78

Weight (kDa)

4.61

Isoelectric Point (pI)

59.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G59950 AT1G59960
fragaria_vesca FvH4_2g01280 FvH4_3g20300 FvH4_3g20300 FvH4_4g25591 FvH4_4g25600 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25612 FvH4_4g25612 FvH4_4g25620 FvH4_4g35840
malus_domestica MD04G1063200.v1.1 MD10G1055100.v1.1 MD13G1014700.v1.1 MD13G1101200.v1.1 MD16G1101500.v1.1
prunus_persica Prupe.1G244700_v2.0.a1 Prupe.1G245100_v2.0.a1 Prupe.1G245400_v2.0.a1 Prupe.1G338900_v2.0.a1 Prupe.5G239400_v2.0.a1
pyrus_communis pycom13g08830 pycom16g01150 pycom16g08620
rosa_chinensis RchiOBHm_Chr1g0329311 RchiOBHm_Chr3g0483001 RchiOBHm_Chr4g0395321 RchiOBHm_Chr4g0433021 RchiOBHm_Chr4g0445371 RchiOBHm_Chr4g0445381 RchiOBHm_Chr4g0445421 RchiOBHm_Chr5g0023771 RchiOBHm_Chr5g0023781 RchiOBHm_Chr5g0068101 RchiOBHm_Chr5g0068111 RchiOBHm_Chr6g0281251 RchiOBHm_Chr7g0225361
rosa_laevigata RLG00000001827 RLG00000005742 RLG00000005743 RLG00000005744 RLG00000006791 RLG00000009629 RLG00000012981 RLG00000023308 RLG00000029902 RLG00000032738 RLG00000032739 RLG00000035956 RLG00000035957
rosa_multiflora Rmu_co7982306.1_g000001 Rmu_co8108716.1_g000001 Rmu_co8139310.1_g000001 Rmu_co8479199.1_g000001 Rmu_sc0000050.1_g000005 Rmu_sc0000050.1_g000006 Rmu_sc0000847.1_g000048 Rmu_sc0001372.1_g000008 Rmu_sc0001762.1_g000035 Rmu_sc0002791.1_g000001 Rmu_sc0002791.1_g000002 Rmu_sc0002791.1_g000005 Rmu_sc0003252.1_g000001 Rmu_sc0003351.1_g000013 Rmu_sc0006184.1_g000008 Rmu_sc0009518.1_g000006 Rmu_sc0010817.1_g000030 Rmu_sc0016867.1_g000002 Rmu_ssc0000027.1_g000010
rosa_roxburghii Rroxscaffold_1G00012480 Rroxscaffold_1G00012490 Rroxscaffold_1G00013240 Rroxscaffold_1G00013250 Rroxscaffold_1G00055410 Rroxscaffold_1G00055420 Rroxscaffold_3G00233890 Rroxscaffold_4G00321220 Rroxscaffold_5G00340230 Rroxscaffold_5G00340260 Rroxscaffold_6G00398750 Rroxscaffold_7G00187200
rosa_rugosa Rorug01G0078500 Rorug03G0202900 Rorug03G0358000 Rorug04G0361100 Rorug04G0361200 Rorug05G0079600 Rorug06G0140100 Rorug07G0228800
rosa_samantha Rh1AG096900 Rh1BG077500 Rh1CG093800 Rh1DG100300 Rh1DG100400 Rh4AG058500 Rh4AG318800 Rh4AG422300 Rh4AG422400 Rh4BG057300 Rh4BG326900 Rh4BG327000 Rh4BG434300 Rh4BG434600 Rh4CG063100 Rh4CG342300 Rh4CG342400 Rh4CG449100 Rh4CG449200 Rh4CG449300 Rh4CG449500 Rh4DG054000 Rh4DG054100 Rh4DG322100 Rh4DG430300 Rh4DG430400 Rh4DG430800 Rh5AG446700 Rh5AG446800 Rh5BG167000 Rh5BG465000 Rh5CG182600 Rh5DG168900 Rh5DG169000 Rh5DG478700 Rh6AG251900 Rh6BG255300 Rh6CG254700 Rh6DG246500 Rh7AG374400 Rh7BG363700 Rh7CG392700 Rh7CG392800 Rh7DG374500 Rh7DG374600
rosa_wichuraiana Rw0G001550 Rw0G005020 Rw1G007510 Rw1G007530 Rw1G007570 Rw3G022750 Rw4G004710 Rw4G027720 Rw4G036230 Rw4G036240 Rw5G015340 Rw6G021880 Rw7G031610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 24
AcsI RAATTY 1 cut(s) 138
AgsI TTSAA 1 cut(s) 61
AluBI AGCT 2 cut(s) 57, 211
AluI AGCT 2 cut(s) 57, 211
Alw26I GTCTC 1 cut(s) 204
AoxI GGCC 1 cut(s) 187
ApoI RAATTY 1 cut(s) 138
Asp700I GAANNNNTTC 1 cut(s) 56
AspS9I GGNCC 1 cut(s) 188
AsuHPI GGTGA 2 cut(s) 49, 61
AxyI CCTNAGG 1 cut(s) 114
BauI CACGAG 1 cut(s) 206
BccI CCATC 2 cut(s) 12, 212
BcoDI GTCTC 1 cut(s) 204
BmgT120I GGNCC 1 cut(s) 188
BmsI GCATC 1 cut(s) 81
Bse21I CCTNAGG 1 cut(s) 114
Bse3DI GCAATG 1 cut(s) 174
BseGI GGATG 2 cut(s) 72, 223
BseMI GCAATG 1 cut(s) 174
BseMII CTCAG 2 cut(s) 5, 128
BshFI GGCC 1 cut(s) 189
BsiSI CCGG 1 cut(s) 161
BsmAI GTCTC 1 cut(s) 204
BsnI GGCC 1 cut(s) 189
BspANI GGCC 1 cut(s) 189
BspCNI CTCAG 2 cut(s) 6, 127
BspQI GCTCTTC 1 cut(s) 47
BsrDI GCAATG 1 cut(s) 174
BssNAI GTATAC 1 cut(s) 25
BssSI CACGAG 1 cut(s) 206
Bst1107I GTATAC 1 cut(s) 25
Bst2BI CACGAG 1 cut(s) 206
Bst6I CTCTTC 2 cut(s) 47, 207
BstDEI CTNAG 2 cut(s) 14, 114
BstF5I GGATG 2 cut(s) 72, 223
BstMAI GTCTC 1 cut(s) 204
BstZ17I GTATAC 1 cut(s) 25
Bsu36I CCTNAGG 1 cut(s) 114
BsuRI GGCC 1 cut(s) 189
BtsCI GGATG 2 cut(s) 72, 223
Cfr13I GGNCC 1 cut(s) 188
CviJI RGCY 3 cut(s) 57, 189, 211
CviKI_1 RGCY 3 cut(s) 57, 189, 211
DdeI CTNAG 2 cut(s) 14, 114
Eam1104I CTCTTC 2 cut(s) 47, 207
EarI CTCTTC 2 cut(s) 47, 207
Eco81I CCTNAGG 1 cut(s) 114
EcoO109I RGGNCCY 1 cut(s) 188
EcoRI GAATTC 1 cut(s) 138
FaiI YATR 2 cut(s) 25, 92
FblI GTMKAC 1 cut(s) 24
FokI GGATG 1 cut(s) 59
HaeIII GGCC 1 cut(s) 189
HapII CCGG 1 cut(s) 161
HinfI GANTC 1 cut(s) 109
HpaII CCGG 1 cut(s) 161
HphI GGTGA 2 cut(s) 49, 61
Hpy166II GTNNAC 1 cut(s) 25
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 2 cut(s) 116, 206
Hpy8I GTNNAC 1 cut(s) 25
HpyAV CCTTC 1 cut(s) 179
HpyCH4V TGCA 1 cut(s) 179
HpyF3I CTNAG 2 cut(s) 14, 114
LguI GCTCTTC 1 cut(s) 47
LpnPI CCDG 2 cut(s) 101, 174
LweI GCATC 1 cut(s) 81
MboII GAAGA 2 cut(s) 64, 194
MluCI AATT 2 cut(s) 119, 138
MlyI GAGTC 1 cut(s) 118
MnlI CCTC 2 cut(s) 123, 146
MroXI GAANNNNTTC 1 cut(s) 56
MseI TTAA 1 cut(s) 229
MspI CCGG 1 cut(s) 161
PciSI GCTCTTC 1 cut(s) 47
PdmI GAANNNNTTC 1 cut(s) 56
PleI GAGTC 1 cut(s) 117
PpsI GAGTC 1 cut(s) 117
PspPI GGNCC 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 47
SaqAI TTAA 1 cut(s) 229
Sau96I GGNCC 1 cut(s) 188
SchI GAGTC 1 cut(s) 118
SetI ASST 3 cut(s) 9, 59, 213
SfaNI GCATC 1 cut(s) 81
SgeI CNNG 8 cut(s) 40, 44, 89, 128, 173, 208, 218, 220
Sse9I AATT 2 cut(s) 119, 138
SspI AATATT 1 cut(s) 85
TaqI TCGA 1 cut(s) 136
TasI AATT 2 cut(s) 119, 138
Tru1I TTAA 1 cut(s) 229
Tru9I TTAA 1 cut(s) 229
TspDTI ATGAA 3 cut(s) 17, 163, 198
XapI RAATTY 1 cut(s) 138
XcmI CCANNNNNNNNNTGG 1 cut(s) 83
XmiI GTMKAC 1 cut(s) 24
XmnI GAANNNNTTC 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.