Non-functional NADPH-dependent codeinone reductase 2-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aldo_ket_red | PF00248 | 23 - 294 | 1.1e-53 | Aldo/keto reductase family |
| LRR_14 | PF23598 | 328 - 403 | 1.1e-07 | Leucine-rich repeat region |
| Pkinase | PF00069 | 1008 - 1116 | 5e-17 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 1009 - 1116 | 2.5e-15 | Protein tyrosine and serine/threonine kinase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2307 |
| AarI | CACCTGC | 1 cut(s) | 820 |
| Acc16I | TGCGCA | 1 cut(s) | 1112 |
| Acc36I | ACCTGC | 4 cut(s) | 820, 1104, 1111, 3413 |
| Acc65I | GGTACC | 1 cut(s) | 677 |
| AccB1I | GGYRCC | 4 cut(s) | 656, 677, 1442, 1669 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 267, 2549 |
| AccBSI | CCGCTC | 1 cut(s) | 2699 |
| AccI | GTMKAC | 3 cut(s) | 1472, 3278, 3294 |
| AccII | CGCG | 1 cut(s) | 3408 |
| AciI | CCGC | 3 cut(s) | 49, 2697, 2871 |
| AclWI | GGATC | 6 cut(s) | 892, 947, 1297, 1600, 2887, 3238 |
| AcoI | YGGCCR | 3 cut(s) | 46, 1005, 2605 |
| AcsI | RAATTY | 9 cut(s) | 526, 608, 1086, 1105, 1230, 1509, 1531, 2050, 2469 |
| AcuI | CTGAAG | 6 cut(s) | 305, 540, 1247, 1856, 2078, 3234 |
| AdeI | CACNNNGTG | 1 cut(s) | 1151 |
| AfaI | GTAC | 6 cut(s) | 173, 679, 2541, 2739, 2866, 3513 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 25, 68, 267, 292, 384, 1028, 1316, 2260, 2549 |
| AflII | CTTAAG | 1 cut(s) | 1768 |
| AflIII | ACRYGT | 5 cut(s) | 1024, 1467, 2310, 2943, 3514 |
| AhlI | ACTAGT | 1 cut(s) | 1079 |
| AjnI | CCWGG | 3 cut(s) | 382, 1335, 1695 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 317, 349 |
| Alw21I | GWGCWC | 3 cut(s) | 249, 2730, 2783 |
| Alw26I | GTCTC | 7 cut(s) | 234, 463, 2667, 3013, 3018, 3331, 3560 |
| AlwI | GGATC | 6 cut(s) | 892, 947, 1297, 1600, 2887, 3238 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 190, 2537 |
| Ama87I | CYCGRG | 5 cut(s) | 125, 237, 404, 726, 2258 |
| ApeKI | GCWGC | 3 cut(s) | 5, 449, 3245 |
| ApoI | RAATTY | 9 cut(s) | 526, 608, 1086, 1105, 1230, 1509, 1531, 2050, 2469 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 511, 543 |
| AseI | ATTAAT | 2 cut(s) | 2678, 3459 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 120, 1869, 2325, 2969 |
| Asp718I | GGTACC | 1 cut(s) | 677 |
| AspA2I | CCTAGG | 1 cut(s) | 2116 |
| AspLEI | GCGC | 4 cut(s) | 891, 1113, 1394, 3408 |
| AspS9I | GGNCC | 7 cut(s) | 54, 366, 415, 932, 985, 1154, 2393 |
| AsuC2I | CCSGG | 1 cut(s) | 2596 |
| AsuHPI | GGTGA | 5 cut(s) | 275, 1757, 2477, 3368, 3461 |
| AsuII | TTCGAA | 1 cut(s) | 2963 |
| AvaI | CYCGRG | 5 cut(s) | 125, 237, 404, 726, 2258 |
| AvaII | GGWCC | 4 cut(s) | 54, 415, 932, 985 |
| AvrII | CCTAGG | 1 cut(s) | 2116 |
| AxyI | CCTNAGG | 1 cut(s) | 1046 |
| BanI | GGYRCC | 4 cut(s) | 656, 677, 1442, 1669 |
| BanII | GRGCYC | 2 cut(s) | 249, 581 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3495, 3527 |
| BauI | CACGAG | 2 cut(s) | 227, 2664 |
| BbsI | GAAGAC | 2 cut(s) | 1514, 2024 |
| Bbv12I | GWGCWC | 3 cut(s) | 249, 2730, 2783 |
| BbvCI | CCTCAGC | 2 cut(s) | 720, 989 |
| BbvI | GCAGC | 3 cut(s) | 17, 461, 3232 |
| BceAI | ACGGC | 4 cut(s) | 190, 939, 2592, 3017 |
| BciT130I | CCWGG | 3 cut(s) | 384, 1337, 1697 |
| BcnI | CCSGG | 1 cut(s) | 2596 |
| BcoDI | GTCTC | 7 cut(s) | 234, 463, 2667, 3013, 3018, 3331, 3560 |
| BcuI | ACTAGT | 1 cut(s) | 1079 |
| BfaI | CTAG | 7 cut(s) | 1080, 1094, 1388, 2045, 2117, 3440, 3619 |
| BfmI | CTRYAG | 3 cut(s) | 1133, 2688, 2832 |
| BfrI | CTTAAG | 1 cut(s) | 1768 |
| BfuAI | ACCTGC | 4 cut(s) | 820, 1104, 1111, 3413 |
| BglII | AGATCT | 1 cut(s) | 1624 |
| BisI | GCNGC | 4 cut(s) | 6, 49, 450, 3246 |
| BlnI | CCTAGG | 1 cut(s) | 2116 |
| BlpI | GCTNAGC | 1 cut(s) | 2616 |
| BlsI | GCNGC | 4 cut(s) | 7, 50, 451, 3247 |
| Bme1390I | CCNGG | 4 cut(s) | 384, 1337, 1697, 2596 |
| Bme18I | GGWCC | 4 cut(s) | 54, 415, 932, 985 |
| BmeT110I | CYCGRG | 5 cut(s) | 125, 237, 404, 726, 2258 |
| BmgT120I | GGNCC | 7 cut(s) | 54, 366, 415, 932, 985, 1154, 2393 |
| BmrFI | CCNGG | 4 cut(s) | 384, 1337, 1697, 2596 |
| BmrI | ACTGGG | 1 cut(s) | 850 |
| BmsI | GCATC | 8 cut(s) | 92, 268, 970, 1383, 1911, 2124, 2287, 3590 |
| BmuI | ACTGGG | 1 cut(s) | 850 |
| BpiI | GAAGAC | 2 cut(s) | 1514, 2024 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 231, 263 |
| BpmI | CTGGAG | 1 cut(s) | 1319 |
| Bpu10I | CCTNAGC | 4 cut(s) | 720, 744, 989, 3402 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2616 |
| Bpu14I | TTCGAA | 1 cut(s) | 2963 |
| BpuEI | CTTGAG | 3 cut(s) | 884, 1771, 3086 |
| BpuMI | CCSGG | 1 cut(s) | 2596 |
| Bsa29I | ATCGAT | 1 cut(s) | 1838 |
| BsaAI | YACGTR | 1 cut(s) | 3515 |
| BsaBI | GATNNNNATC | 1 cut(s) | 351 |
| BsaI | GGTCTC | 1 cut(s) | 3331 |
| BsaJI | CCNNGG | 9 cut(s) | 383, 453, 651, 956, 1314, 1696, 2116, 2259, 2338 |
| BsaWI | WCCGGW | 2 cut(s) | 1589, 1661 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 535, 565, 2907, 2937 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 25, 68, 267, 292, 384, 1028, 1316, 2260, 2549 |
| Bse118I | RCCGGY | 1 cut(s) | 1007 |
| Bse1I | ACTGG | 6 cut(s) | 368, 621, 669, 845, 934, 3142 |
| Bse21I | CCTNAGG | 1 cut(s) | 1046 |
| Bse3DI | GCAATG | 3 cut(s) | 1737, 1780, 2973 |
| Bse8I | GATNNNNATC | 1 cut(s) | 351 |
| BseBI | CCWGG | 3 cut(s) | 384, 1337, 1697 |
| BseCI | ATCGAT | 1 cut(s) | 1838 |
| BseDI | CCNNGG | 9 cut(s) | 383, 453, 651, 956, 1314, 1696, 2116, 2259, 2338 |
| BseGI | GGATG | 8 cut(s) | 83, 1374, 1902, 2036, 2204, 3295, 3581, 3610 |
| BseJI | GATNNNNATC | 1 cut(s) | 351 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 25, 68, 267, 292, 384, 1028, 1316, 2260, 2549 |
| BseMI | GCAATG | 3 cut(s) | 1737, 1780, 2973 |
| BseNI | ACTGG | 6 cut(s) | 368, 621, 669, 845, 934, 3142 |
| BseRI | GAGGAG | 3 cut(s) | 422, 1544, 2276 |
| BseXI | GCAGC | 3 cut(s) | 17, 461, 3232 |
| BsgI | GTGCAG | 1 cut(s) | 848 |
| Bsh1236I | CGCG | 1 cut(s) | 3408 |
| BshNI | GGYRCC | 4 cut(s) | 656, 677, 1442, 1669 |
| BshVI | ATCGAT | 1 cut(s) | 1838 |
| BsiHKAI | GWGCWC | 3 cut(s) | 249, 2730, 2783 |
| BsiHKCI | CYCGRG | 5 cut(s) | 125, 237, 404, 726, 2258 |
| BsiSI | CCGG | 6 cut(s) | 1008, 1590, 1662, 1673, 1764, 2595 |
| BslFI | GGGAC | 3 cut(s) | 928, 1837, 3532 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 25, 68, 267, 292, 384, 1028, 1316, 2260, 2549 |
| BsmAI | GTCTC | 7 cut(s) | 234, 463, 2667, 3013, 3018, 3331, 3560 |
| BsmBI | CGTCTC | 3 cut(s) | 234, 3013, 3560 |
| BsmFI | GGGAC | 3 cut(s) | 928, 1837, 3532 |
| Bso31I | GGTCTC | 1 cut(s) | 3331 |
| BsoBI | CYCGRG | 5 cut(s) | 125, 237, 404, 726, 2258 |
| Bsp119I | TTCGAA | 1 cut(s) | 2963 |
| Bsp1286I | GDGCHC | 4 cut(s) | 249, 581, 2730, 2783 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2616 |
| Bsp19I | CCATGG | 1 cut(s) | 453 |
| BspACI | CCGC | 3 cut(s) | 49, 2697, 2871 |
| BspDI | ATCGAT | 1 cut(s) | 1838 |
| BspFNI | CGCG | 1 cut(s) | 3408 |
| BspHI | TCATGA | 1 cut(s) | 2008 |
| BspMI | ACCTGC | 4 cut(s) | 820, 1104, 1111, 3413 |
| BspPI | GGATC | 6 cut(s) | 892, 947, 1297, 1600, 2887, 3238 |
| BspQI | GCTCTTC | 5 cut(s) | 254, 788, 1860, 2712, 2735 |
| BspT104I | TTCGAA | 1 cut(s) | 2963 |
| BspT107I | GGYRCC | 4 cut(s) | 656, 677, 1442, 1669 |
| BspTI | CTTAAG | 1 cut(s) | 1768 |
| BspTNI | GGTCTC | 1 cut(s) | 3331 |
| BsrBI | CCGCTC | 1 cut(s) | 2699 |
| BsrDI | GCAATG | 3 cut(s) | 1737, 1780, 2973 |
| BsrFI | RCCGGY | 1 cut(s) | 1007 |
| BsrI | ACTGG | 6 cut(s) | 368, 621, 669, 845, 934, 3142 |
| BssAI | RCCGGY | 1 cut(s) | 1007 |
| BssECI | CCNNGG | 9 cut(s) | 383, 453, 651, 956, 1314, 1696, 2116, 2259, 2338 |
| BssNAI | GTATAC | 1 cut(s) | 3295 |
| BssSI | CACGAG | 2 cut(s) | 227, 2664 |
| BssT1I | CCWWGG | 6 cut(s) | 453, 651, 956, 1314, 2116, 2338 |
| Bst1107I | GTATAC | 1 cut(s) | 3295 |
| Bst2BI | CACGAG | 2 cut(s) | 227, 2664 |
| Bst2UI | CCWGG | 3 cut(s) | 384, 1337, 1697 |
| Bst4CI | ACNGT | 5 cut(s) | 739, 2661, 2776, 3299, 3594 |
| BstAFI | CTTAAG | 1 cut(s) | 1768 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 785, 826, 3419 |
| BstBAI | YACGTR | 1 cut(s) | 3515 |
| BstBI | TTCGAA | 1 cut(s) | 2963 |
| BstC8I | GCNNGC | 3 cut(s) | 1009, 2060, 2125 |
| BstDSI | CCRYGG | 1 cut(s) | 453 |
| BstEII | GGTNACC | 1 cut(s) | 143 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2258 |
| BstF5I | GGATG | 8 cut(s) | 83, 1374, 1902, 2036, 2204, 3295, 3581, 3610 |
| BstFNI | CGCG | 1 cut(s) | 3408 |
| BstHHI | GCGC | 4 cut(s) | 891, 1113, 1394, 3408 |
| BstMAI | GTCTC | 7 cut(s) | 234, 463, 2667, 3013, 3018, 3331, 3560 |
| BstNI | CCWGG | 3 cut(s) | 384, 1337, 1697 |
| BstNSI | RCATGY | 6 cut(s) | 1028, 1471, 2062, 2127, 2314, 2947 |
| BstPI | GGTNACC | 1 cut(s) | 143 |
| BstSCI | CCNGG | 4 cut(s) | 382, 1335, 1695, 2594 |
| BstSFI | CTRYAG | 3 cut(s) | 1133, 2688, 2832 |
| BstUI | CGCG | 1 cut(s) | 3408 |
| BstV1I | GCAGC | 3 cut(s) | 17, 461, 3232 |
| BstV2I | GAAGAC | 2 cut(s) | 1514, 2024 |
| BstX2I | RGATCY | 4 cut(s) | 1302, 1592, 1624, 2879 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1534, 1895 |
| BstYI | RGATCY | 4 cut(s) | 1302, 1592, 1624, 2879 |
| BstZ17I | GTATAC | 1 cut(s) | 3295 |
| Bsu15I | ATCGAT | 1 cut(s) | 1838 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1046 |
| BsuTUI | ATCGAT | 1 cut(s) | 1838 |
| BtgI | CCRYGG | 1 cut(s) | 453 |
| BtgZI | GCGATG | 1 cut(s) | 3013 |
| BtsCI | GGATG | 8 cut(s) | 83, 1374, 1902, 2036, 2204, 3295, 3581, 3610 |
| BtsI | GCAGTG | 1 cut(s) | 795 |
| BtsIMutI | CAGTG | 9 cut(s) | 361, 379, 628, 795, 1252, 1394, 2781, 3342, 3364 |
| BveI | ACCTGC | 4 cut(s) | 820, 1104, 1111, 3413 |
| Cac8I | GCNNGC | 3 cut(s) | 1009, 2060, 2125 |
| CaiI | CAGNNNCTG | 2 cut(s) | 190, 2537 |
| CciI | TCATGA | 1 cut(s) | 2008 |
| CfoI | GCGC | 4 cut(s) | 891, 1113, 1394, 3408 |
| Cfr10I | RCCGGY | 1 cut(s) | 1007 |
| Cfr13I | GGNCC | 7 cut(s) | 54, 366, 415, 932, 985, 1154, 2393 |
| ClaI | ATCGAT | 1 cut(s) | 1838 |
| Csp6I | GTAC | 6 cut(s) | 172, 678, 2540, 2738, 2865, 3512 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 604, 639, 1228, 1263 |
| CviQI | GTAC | 6 cut(s) | 172, 678, 2540, 2738, 2865, 3512 |
| DraI | TTTAAA | 2 cut(s) | 2484, 2560 |
| DraIII | CACNNNGTG | 1 cut(s) | 1151 |
| EaeI | YGGCCR | 3 cut(s) | 46, 1005, 2605 |
| Ecl136II | GAGCTC | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 6 cut(s) | 453, 651, 956, 1314, 2116, 2338 |
| Eco24I | GRGCYC | 2 cut(s) | 249, 581 |
| Eco31I | GGTCTC | 1 cut(s) | 3331 |
| Eco32I | GATATC | 1 cut(s) | 1842 |
| Eco47I | GGWCC | 4 cut(s) | 54, 415, 932, 985 |
| Eco53kI | GAGCTC | 1 cut(s) | 247 |
| Eco57I | CTGAAG | 6 cut(s) | 305, 540, 1247, 1856, 2078, 3234 |
| Eco81I | CCTNAGG | 1 cut(s) | 1046 |
| Eco88I | CYCGRG | 5 cut(s) | 125, 237, 404, 726, 2258 |
| Eco91I | GGTNACC | 1 cut(s) | 143 |
| EcoICRI | GAGCTC | 1 cut(s) | 247 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2258 |
| EcoO65I | GGTNACC | 1 cut(s) | 143 |
| EcoRI | GAATTC | 1 cut(s) | 608 |
| EcoRII | CCWGG | 3 cut(s) | 382, 1335, 1695 |
| EcoRV | GATATC | 1 cut(s) | 1842 |
| EcoT14I | CCWWGG | 6 cut(s) | 453, 651, 956, 1314, 2116, 2338 |
| EcoT38I | GRGCYC | 2 cut(s) | 249, 581 |
| ErhI | CCWWGG | 6 cut(s) | 453, 651, 956, 1314, 2116, 2338 |
| Esp3I | CGTCTC | 3 cut(s) | 234, 3013, 3560 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 846, 878, 1506, 1538 |
| FaqI | GGGAC | 3 cut(s) | 928, 1837, 3532 |
| FauNDI | CATATG | 2 cut(s) | 2812, 3283 |
| FblI | GTMKAC | 3 cut(s) | 1472, 3278, 3294 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 49, 450, 3246 |
| FokI | GGATG | 8 cut(s) | 70, 1361, 1889, 2023, 2191, 3302, 3568, 3617 |
| FriOI | GRGCYC | 2 cut(s) | 249, 581 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 49, 450, 3246 |
| FspBI | CTAG | 7 cut(s) | 1080, 1094, 1388, 2045, 2117, 3440, 3619 |
| FspI | TGCGCA | 1 cut(s) | 1112 |
| GlaI | GCGC | 4 cut(s) | 890, 1112, 1393, 3407 |
| GluI | GCNGC | 4 cut(s) | 6, 49, 450, 3246 |
| GsuI | CTGGAG | 1 cut(s) | 1319 |
| HapII | CCGG | 6 cut(s) | 1008, 1590, 1662, 1673, 1764, 2595 |
| HhaI | GCGC | 4 cut(s) | 891, 1113, 1394, 3408 |
| Hin6I | GCGC | 4 cut(s) | 889, 1111, 1392, 3406 |
| HinP1I | GCGC | 4 cut(s) | 889, 1111, 1392, 3406 |
| HincII | GTYRAC | 3 cut(s) | 1915, 2316, 3279 |
| HindII | GTYRAC | 3 cut(s) | 1915, 2316, 3279 |
| HindIII | AAGCTT | 7 cut(s) | 263, 1000, 1039, 1259, 1685, 1859, 1988 |
| HpaI | GTTAAC | 1 cut(s) | 2316 |
| HpaII | CCGG | 6 cut(s) | 1008, 1590, 1662, 1673, 1764, 2595 |
| HphI | GGTGA | 5 cut(s) | 275, 1757, 2477, 3368, 3461 |
| Hpy166II | GTNNAC | 7 cut(s) | 1473, 1915, 2316, 3279, 3295, 3327, 3512 |
| Hpy8I | GTNNAC | 7 cut(s) | 1473, 1915, 2316, 3279, 3295, 3327, 3512 |
| HpyCH4III | ACNGT | 5 cut(s) | 739, 2661, 2776, 3299, 3594 |
| HpyCH4IV | ACGT | 5 cut(s) | 1328, 1826, 3353, 3483, 3514 |
| HpySE526I | ACGT | 5 cut(s) | 1328, 1826, 3353, 3483, 3514 |
| HspAI | GCGC | 4 cut(s) | 889, 1111, 1392, 3406 |
| KpnI | GGTACC | 1 cut(s) | 681 |
| KroI | GCCGGC | 1 cut(s) | 1007 |
| KroNI | GCCGGC | 1 cut(s) | 1009 |
| KspAI | GTTAAC | 1 cut(s) | 2316 |
| LguI | GCTCTTC | 5 cut(s) | 254, 788, 1860, 2712, 2735 |
| LmnI | GCTCC | 9 cut(s) | 181, 776, 1016, 1701, 1978, 2177, 2534, 2957, 3218 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 461, 3232 |
| LweI | GCATC | 8 cut(s) | 92, 268, 970, 1383, 1911, 2124, 2287, 3590 |
| MaeI | CTAG | 7 cut(s) | 1080, 1094, 1388, 2045, 2117, 3440, 3619 |
| MaeII | ACGT | 5 cut(s) | 1328, 1826, 3353, 3483, 3514 |
| MaeIII | GTNAC | 9 cut(s) | 143, 395, 634, 919, 973, 1649, 1745, 2076, 2946 |
| MbiI | CCGCTC | 1 cut(s) | 2699 |
| MfeI | CAATTG | 3 cut(s) | 332, 1177, 2544 |
| MflI | RGATCY | 4 cut(s) | 1302, 1592, 1624, 2879 |
| MhlI | GDGCHC | 4 cut(s) | 249, 581, 2730, 2783 |
| MlyI | GAGTC | 8 cut(s) | 196, 403, 514, 1528, 1996, 2038, 2657, 3554 |
| MmeI | TCCRAC | 2 cut(s) | 111, 2248 |
| MroNI | GCCGGC | 1 cut(s) | 1007 |
| MroXI | GAANNNNTTC | 4 cut(s) | 120, 1869, 2325, 2969 |
| MslI | CAYNNNNRTG | 2 cut(s) | 62, 2013 |
| MspCI | CTTAAG | 1 cut(s) | 1768 |
| MspI | CCGG | 6 cut(s) | 1008, 1590, 1662, 1673, 1764, 2595 |
| MspR9I | CCNGG | 4 cut(s) | 384, 1337, 1697, 2596 |
| MunI | CAATTG | 3 cut(s) | 332, 1177, 2544 |
| MvaI | CCWGG | 3 cut(s) | 384, 1337, 1697 |
| MvnI | CGCG | 1 cut(s) | 3408 |
| NaeI | GCCGGC | 1 cut(s) | 1009 |
| NciI | CCSGG | 1 cut(s) | 2596 |
| NcoI | CCATGG | 1 cut(s) | 453 |
| NdeI | CATATG | 2 cut(s) | 2812, 3283 |
| NgoMIV | GCCGGC | 1 cut(s) | 1007 |
| NmeAIII | GCCGAG | 2 cut(s) | 201, 3004 |
| NmuCI | GTSAC | 4 cut(s) | 395, 634, 973, 1745 |
| NsbI | TGCGCA | 1 cut(s) | 1112 |
| NspI | RCATGY | 6 cut(s) | 1028, 1471, 2062, 2127, 2314, 2947 |
| NspV | TTCGAA | 1 cut(s) | 2963 |
| PaeI | GCATGC | 2 cut(s) | 2062, 2127 |
| PaeR7I | CTCGAG | 3 cut(s) | 125, 237, 404 |
| PagI | TCATGA | 1 cut(s) | 2008 |
| PaqCI | CACCTGC | 1 cut(s) | 820 |
| PciI | ACATGT | 4 cut(s) | 1024, 1467, 2310, 2943 |
| PciSI | GCTCTTC | 5 cut(s) | 254, 788, 1860, 2712, 2735 |
| PdiI | GCCGGC | 1 cut(s) | 1009 |
| PdmI | GAANNNNTTC | 4 cut(s) | 120, 1869, 2325, 2969 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 267, 2549 |
| PkrI | GCNGC | 4 cut(s) | 7, 50, 451, 3247 |
| PleI | GAGTC | 8 cut(s) | 195, 402, 514, 1527, 1996, 2037, 2656, 3553 |
| PpsI | GAGTC | 8 cut(s) | 195, 402, 514, 1527, 1996, 2037, 2656, 3553 |
| Ppu21I | YACGTR | 1 cut(s) | 3515 |
| PscI | ACATGT | 4 cut(s) | 1024, 1467, 2310, 2943 |
| PshBI | ATTAAT | 2 cut(s) | 2678, 3459 |
| PsiI | TTATAA | 1 cut(s) | 2307 |
| Psp124BI | GAGCTC | 1 cut(s) | 249 |
| Psp6I | CCWGG | 3 cut(s) | 382, 1335, 1695 |
| PspEI | GGTNACC | 1 cut(s) | 143 |
| PspGI | CCWGG | 3 cut(s) | 382, 1335, 1695 |
| PspPI | GGNCC | 7 cut(s) | 54, 366, 415, 932, 985, 1154, 2393 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2061, 2093 |
| PstNI | CAGNNNCTG | 2 cut(s) | 190, 2537 |
| PsuI | RGATCY | 4 cut(s) | 1302, 1592, 1624, 2879 |
| RsaI | GTAC | 6 cut(s) | 173, 679, 2541, 2739, 2866, 3513 |
| RsaNI | GTAC | 6 cut(s) | 172, 678, 2540, 2738, 2865, 3512 |
| RseI | CAYNNNNRTG | 2 cut(s) | 62, 2013 |
| SacI | GAGCTC | 1 cut(s) | 249 |
| SalI | GTCGAC | 1 cut(s) | 3277 |
| SapI | GCTCTTC | 5 cut(s) | 254, 788, 1860, 2712, 2735 |
| SatI | GCNGC | 4 cut(s) | 6, 49, 450, 3246 |
| Sau96I | GGNCC | 7 cut(s) | 54, 366, 415, 932, 985, 1154, 2393 |
| SchI | GAGTC | 8 cut(s) | 196, 403, 514, 1528, 1996, 2038, 2657, 3554 |
| ScrFI | CCNGG | 4 cut(s) | 384, 1337, 1697, 2596 |
| SduI | GDGCHC | 4 cut(s) | 249, 581, 2730, 2783 |
| SfaNI | GCATC | 8 cut(s) | 92, 268, 970, 1383, 1911, 2124, 2287, 3590 |
| SfcI | CTRYAG | 3 cut(s) | 1133, 2688, 2832 |
| Sfr274I | CTCGAG | 3 cut(s) | 125, 237, 404 |
| SfuI | TTCGAA | 1 cut(s) | 2963 |
| SinI | GGWCC | 4 cut(s) | 54, 415, 932, 985 |
| SlaI | CTCGAG | 3 cut(s) | 125, 237, 404 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 62, 2013 |
| SmlI | CTYRAG | 7 cut(s) | 125, 237, 404, 863, 1750, 1768, 3101 |
| SmoI | CTYRAG | 7 cut(s) | 125, 237, 404, 863, 1750, 1768, 3101 |
| SpeI | ACTAGT | 1 cut(s) | 1079 |
| SphI | GCATGC | 2 cut(s) | 2062, 2127 |
| SsiI | CCGC | 3 cut(s) | 49, 2697, 2871 |
| SspI | AATATT | 5 cut(s) | 1711, 1960, 2908, 3001, 3457 |
| SspMI | CTAG | 7 cut(s) | 1080, 1094, 1388, 2045, 2117, 3440, 3619 |
| SstI | GAGCTC | 1 cut(s) | 249 |
| StyD4I | CCNGG | 4 cut(s) | 382, 1335, 1695, 2594 |
| StyI | CCWWGG | 6 cut(s) | 453, 651, 956, 1314, 2116, 2338 |
| TaaI | ACNGT | 5 cut(s) | 739, 2661, 2776, 3299, 3594 |
| TaiI | ACGT | 5 cut(s) | 1331, 1829, 3356, 3486, 3517 |
| TatI | WGTACW | 1 cut(s) | 2737 |
| TauI | GCSGC | 1 cut(s) | 51 |
| TscAI | CASTG | 9 cut(s) | 368, 379, 628, 795, 1252, 1401, 2781, 3349, 3364 |
| TseFI | GTSAC | 4 cut(s) | 395, 634, 973, 1745 |
| TseI | GCWGC | 3 cut(s) | 5, 449, 3245 |
| Tsp45I | GTSAC | 4 cut(s) | 395, 634, 973, 1745 |
| TspGWI | ACGGA | 2 cut(s) | 2333, 2394 |
| TspRI | CASTG | 9 cut(s) | 368, 379, 628, 795, 1252, 1401, 2781, 3349, 3364 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 267, 2549 |
| Vha464I | CTTAAG | 1 cut(s) | 1768 |
| VpaK11BI | GGWCC | 4 cut(s) | 54, 415, 932, 985 |
| VspI | ATTAAT | 2 cut(s) | 2678, 3459 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2258 |
| XapI | RAATTY | 9 cut(s) | 526, 608, 1086, 1105, 1230, 1509, 1531, 2050, 2469 |
| XbaI | TCTAGA | 1 cut(s) | 1093 |
| XceI | RCATGY | 6 cut(s) | 1028, 1471, 2062, 2127, 2314, 2947 |
| XhoI | CTCGAG | 3 cut(s) | 125, 237, 404 |
| XmaJI | CCTAGG | 1 cut(s) | 2116 |
| XmiI | GTMKAC | 3 cut(s) | 1472, 3278, 3294 |
| XmnI | GAANNNNTTC | 4 cut(s) | 120, 1869, 2325, 2969 |
| XspI | CTAG | 7 cut(s) | 1080, 1094, 1388, 2045, 2117, 3440, 3619 |