pycom16g01150

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
711511 .. 713597
2087 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g01150.2

Sequence Viewer

Length: 981 bp
ATGGTGGGTCTAGTAGCACTCTTATGGATATTGCTTAAAACTGAAATCGATTGGTGTGTGGTGGAGGCAAAAATGGGAAGCAAGAGCATGCCGAAATTGCCACTCCCGCTGGCGGCAAGCGGGAAAAGCATGCCGGTGATAGGGTCAGGGACGTTTCCTTCAGCCGGCAGTGAAGCCACAAAAGCAGCCATTCTCAATGCAATCAGAGCTGGATACACGCACTTTGACACGGCTGCTGCTTACAACACAGAGCAGTTTTTGGGTGAAGCCATTTCAGAAGCTCTTTCTCTTGGCCTCATCAATTCCCGGGATGACCTTTTCATCACTTCCAATCTCTGGTGTAGCGACGCACACCCTCATCTTGTGCTGCCTGCCATTCATAACTCTCTCAGCCGGGAAAATTTGATTTTCCTATTAAAAGAGGACCTTCTTCCCATGGATTTCAAGTCGGTTTGGGAAGCCATGGAGGAATGTCAAAACCTTGGCCTCACCAAGTCCATAGGAGTCAGCAACTTCTCTTGCAAGAAGCTTGAAATCTTGCTTACCACTGCTAAAATTCCCCCTGCAGTCAACCAAGTGGAGATGAACCCAGTTTGGCAACAGAAAAAACTAAGACAGTTTTGCGAGAAAAAGGATATAGTTATAGCAGCTTACTCTCCACAGGGGGCAAACGGAGCTTTTTGGGGGACAAAGAGAGTCATGGATTGTGAGATGCTCAAAGAGATTGCGCACGCCAAAGGAAAAACCCTAGCCCAGGTTTGTTTGAGGTGGGCTTATGAGCAAGGGGTGATCGTCGTGGTGAAGAGCTTTAACAAGGAGAGGATTAAAGAAAATATTGACGTATTTGATTGGGAGCTGAGTCCTGAGGATTTGGATAAGATCAATCAAATTCCACAAATCAGAGGGTACCAAGGATTTGACTTCATTTCAGATGAAGGCCCTTACAAGTCTCCTGAGGAGCTTTGGGATGGAGAGATTTAG

Protein Analysis

327

Amino Acids

36.29

Weight (kDa)

5.31

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G59950 AT1G59960
fragaria_vesca FvH4_2g01280 FvH4_3g20300 FvH4_3g20300 FvH4_4g25591 FvH4_4g25600 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25612 FvH4_4g25612 FvH4_4g25620 FvH4_4g35840
malus_domestica MD04G1063200.v1.1 MD10G1055100.v1.1 MD13G1014700.v1.1 MD13G1101200.v1.1 MD16G1101500.v1.1
prunus_persica Prupe.1G244700_v2.0.a1 Prupe.1G245100_v2.0.a1 Prupe.1G245400_v2.0.a1 Prupe.1G338900_v2.0.a1 Prupe.5G239400_v2.0.a1
pyrus_communis pycom13g08830 pycom16g01150 pycom16g08620
rosa_chinensis RchiOBHm_Chr1g0329311 RchiOBHm_Chr3g0483001 RchiOBHm_Chr4g0395321 RchiOBHm_Chr4g0433021 RchiOBHm_Chr4g0445371 RchiOBHm_Chr4g0445381 RchiOBHm_Chr4g0445421 RchiOBHm_Chr5g0023771 RchiOBHm_Chr5g0023781 RchiOBHm_Chr5g0068101 RchiOBHm_Chr5g0068111 RchiOBHm_Chr6g0281251 RchiOBHm_Chr7g0225361
rosa_laevigata RLG00000001827 RLG00000005742 RLG00000005743 RLG00000005744 RLG00000006791 RLG00000009629 RLG00000012981 RLG00000023308 RLG00000029902 RLG00000032738 RLG00000032739 RLG00000035956 RLG00000035957
rosa_multiflora Rmu_co7982306.1_g000001 Rmu_co8108716.1_g000001 Rmu_co8139310.1_g000001 Rmu_co8479199.1_g000001 Rmu_sc0000050.1_g000005 Rmu_sc0000050.1_g000006 Rmu_sc0000847.1_g000048 Rmu_sc0001372.1_g000008 Rmu_sc0001762.1_g000035 Rmu_sc0002791.1_g000001 Rmu_sc0002791.1_g000002 Rmu_sc0002791.1_g000005 Rmu_sc0003252.1_g000001 Rmu_sc0003351.1_g000013 Rmu_sc0006184.1_g000008 Rmu_sc0009518.1_g000006 Rmu_sc0010817.1_g000030 Rmu_sc0016867.1_g000002 Rmu_ssc0000027.1_g000010
rosa_roxburghii Rroxscaffold_1G00012480 Rroxscaffold_1G00012490 Rroxscaffold_1G00013240 Rroxscaffold_1G00013250 Rroxscaffold_1G00055410 Rroxscaffold_1G00055420 Rroxscaffold_3G00233890 Rroxscaffold_4G00321220 Rroxscaffold_5G00340230 Rroxscaffold_5G00340260 Rroxscaffold_6G00398750 Rroxscaffold_7G00187200
rosa_rugosa Rorug01G0078500 Rorug03G0202900 Rorug03G0358000 Rorug04G0361100 Rorug04G0361200 Rorug05G0079600 Rorug06G0140100 Rorug07G0228800
rosa_samantha Rh1AG096900 Rh1BG077500 Rh1CG093800 Rh1DG100300 Rh1DG100400 Rh4AG058500 Rh4AG318800 Rh4AG422300 Rh4AG422400 Rh4BG057300 Rh4BG326900 Rh4BG327000 Rh4BG434300 Rh4BG434600 Rh4CG063100 Rh4CG342300 Rh4CG342400 Rh4CG449100 Rh4CG449200 Rh4CG449300 Rh4CG449500 Rh4DG054000 Rh4DG054100 Rh4DG322100 Rh4DG430300 Rh4DG430400 Rh4DG430800 Rh5AG446700 Rh5AG446800 Rh5BG167000 Rh5BG465000 Rh5CG182600 Rh5DG168900 Rh5DG169000 Rh5DG478700 Rh6AG251900 Rh6BG255300 Rh6CG254700 Rh6DG246500 Rh7AG374400 Rh7BG363700 Rh7CG392700 Rh7CG392800 Rh7DG374500 Rh7DG374600
rosa_wichuraiana Rw0G001550 Rw0G005020 Rw1G007510 Rw1G007530 Rw1G007570 Rw3G022750 Rw4G004710 Rw4G027720 Rw4G036230 Rw4G036240 Rw5G015340 Rw6G021880 Rw7G031610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 729
Acc65I GGTACC 1 cut(s) 906
AccB1I GGYRCC 1 cut(s) 906
AccB7I CCANNNNNTGG 1 cut(s) 336
AciI CCGC 3 cut(s) 107, 113, 120
AcsI RAATTY 3 cut(s) 400, 555, 888
AcuI CTGAAG 1 cut(s) 144
AfaI GTAC 1 cut(s) 908
AfiI CCNNNNNNNGG 5 cut(s) 112, 140, 164, 336, 754
AgsI TTSAA 2 cut(s) 445, 533
AjnI CCWGG 1 cut(s) 753
AluBI AGCT 8 cut(s) 209, 281, 529, 650, 677, 807, 856, 961
AluI AGCT 8 cut(s) 209, 281, 529, 650, 677, 807, 856, 961
Alw26I GTCTC 1 cut(s) 954
Ama87I CYCGRG 1 cut(s) 306
AoxI GGCC 3 cut(s) 292, 484, 937
ApeKI GCWGC 5 cut(s) 185, 233, 236, 367, 647
ApoI RAATTY 3 cut(s) 400, 555, 888
Asp718I GGTACC 1 cut(s) 906
AspLEI GCGC 1 cut(s) 730
AspS9I GGNCC 2 cut(s) 424, 938
AsuC2I CCSGG 3 cut(s) 307, 308, 395
AsuHPI GGTGA 5 cut(s) 148, 275, 481, 799, 811
AvaI CYCGRG 1 cut(s) 306
AvaII GGWCC 1 cut(s) 424
AxyI CCTNAGG 2 cut(s) 864, 954
BanI GGYRCC 1 cut(s) 906
BbvI GCAGC 5 cut(s) 197, 220, 223, 354, 659
BccI CCATC 1 cut(s) 962
BceAI ACGGC 1 cut(s) 246
BciT130I CCWGG 1 cut(s) 755
BciVI GTATCC 1 cut(s) 206
BcnI CCSGG 3 cut(s) 307, 308, 395
BcoDI GTCTC 1 cut(s) 954
BfaI CTAG 2 cut(s) 11, 749
BfmI CTRYAG 1 cut(s) 564
BfuI GTATCC 1 cut(s) 206
BisI GCNGC 6 cut(s) 114, 186, 234, 237, 368, 648
BlsI GCNGC 6 cut(s) 115, 187, 235, 238, 369, 649
Bme1390I CCNGG 4 cut(s) 307, 308, 395, 755
Bme18I GGWCC 1 cut(s) 424
BmeT110I CYCGRG 1 cut(s) 306
BmgT120I GGNCC 2 cut(s) 424, 938
BmiI GGNNCC 1 cut(s) 908
BmrFI CCNGG 4 cut(s) 307, 308, 395, 755
BmrI ACTGGG 1 cut(s) 584
BmsI GCATC 1 cut(s) 702
BmuI ACTGGG 1 cut(s) 584
BpuMI CCSGG 3 cut(s) 307, 308, 395
Bsa29I ATCGAT 1 cut(s) 48
BsaJI CCNNGG 6 cut(s) 306, 435, 462, 481, 753, 910
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 140, 164, 336, 754
Bse118I RCCGGY 2 cut(s) 133, 164
Bse1I ACTGG 1 cut(s) 590
Bse21I CCTNAGG 2 cut(s) 864, 954
BseBI CCWGG 1 cut(s) 755
BseCI ATCGAT 1 cut(s) 48
BseDI CCNNGG 6 cut(s) 306, 435, 462, 481, 753, 910
BseGI GGATG 2 cut(s) 316, 973
BseLI CCNNNNNNNGG 5 cut(s) 112, 140, 164, 336, 754
BseMII CTCAG 4 cut(s) 403, 848, 855, 945
BseNI ACTGG 1 cut(s) 590
BseRI GAGGAG 1 cut(s) 971
BseXI GCAGC 5 cut(s) 197, 220, 223, 354, 659
BshFI GGCC 3 cut(s) 294, 486, 939
BshNI GGYRCC 1 cut(s) 906
BshVI ATCGAT 1 cut(s) 48
BsiHKCI CYCGRG 1 cut(s) 306
BsiSI CCGG 4 cut(s) 134, 165, 307, 394
BslFI GGGAC 2 cut(s) 163, 700
BslI CCNNNNNNNGG 5 cut(s) 112, 140, 164, 336, 754
BsmAI GTCTC 1 cut(s) 954
BsmFI GGGAC 2 cut(s) 163, 700
BsnI GGCC 3 cut(s) 294, 486, 939
BsoBI CYCGRG 1 cut(s) 306
Bsp143I GATC 2 cut(s) 789, 879
Bsp19I CCATGG 2 cut(s) 435, 462
BspACI CCGC 3 cut(s) 107, 113, 120
BspANI GGCC 3 cut(s) 294, 486, 939
BspCNI CTCAG 4 cut(s) 402, 849, 856, 946
BspDI ATCGAT 1 cut(s) 48
BspLI GGNNCC 1 cut(s) 908
BspMAI CTGCAG 1 cut(s) 568
BspQI GCTCTTC 1 cut(s) 797
BspT107I GGYRCC 1 cut(s) 906
BsrFI RCCGGY 2 cut(s) 133, 164
BsrI ACTGG 1 cut(s) 590
BssAI RCCGGY 2 cut(s) 133, 164
BssECI CCNNGG 6 cut(s) 306, 435, 462, 481, 753, 910
BssMI GATC 2 cut(s) 789, 879
BssT1I CCWWGG 4 cut(s) 435, 462, 481, 910
Bst2UI CCWGG 1 cut(s) 755
Bst4CI ACNGT 1 cut(s) 618
Bst6I CTCTTC 1 cut(s) 797
BstC8I GCNNGC 7 cut(s) 89, 111, 118, 131, 166, 372, 732
BstDEI CTNAG 5 cut(s) 389, 611, 857, 864, 954
BstDSI CCRYGG 2 cut(s) 435, 462
BstENI CCTNNNNNAGG 1 cut(s) 752
BstF5I GGATG 2 cut(s) 316, 973
BstHHI GCGC 1 cut(s) 730
BstKTI GATC 2 cut(s) 792, 882
BstMAI GTCTC 1 cut(s) 954
BstMBI GATC 2 cut(s) 789, 879
BstMWI GCNNNNNNNGC 6 cut(s) 97, 106, 126, 182, 206, 674
BstNI CCWGG 1 cut(s) 755
BstNSI RCATGY 2 cut(s) 91, 133
BstSCI CCNGG 4 cut(s) 305, 306, 393, 753
BstSFI CTRYAG 1 cut(s) 564
BstV1I GCAGC 5 cut(s) 197, 220, 223, 354, 659
Bsu15I ATCGAT 1 cut(s) 48
Bsu36I CCTNAGG 2 cut(s) 864, 954
BsuI GTATCC 1 cut(s) 206
BsuRI GGCC 3 cut(s) 294, 486, 939
BsuTUI ATCGAT 1 cut(s) 48
BtgI CCRYGG 2 cut(s) 435, 462
BtsCI GGATG 2 cut(s) 316, 973
BtsI GCAGTG 2 cut(s) 175, 546
BtsIMutI CAGTG 2 cut(s) 175, 546
Cac8I GCNNGC 7 cut(s) 89, 111, 118, 131, 166, 372, 732
CfoI GCGC 1 cut(s) 730
Cfr10I RCCGGY 2 cut(s) 133, 164
Cfr13I GGNCC 2 cut(s) 424, 938
Cfr9I CCCGGG 1 cut(s) 306
ClaI ATCGAT 1 cut(s) 48
CseI GACGC 1 cut(s) 356
Csp6I GTAC 1 cut(s) 907
CviAII CATG 5 cut(s) 88, 130, 436, 463, 700
CviQI GTAC 1 cut(s) 907
DdeI CTNAG 5 cut(s) 389, 611, 857, 864, 954
DpnI GATC 2 cut(s) 791, 881
DpnII GATC 2 cut(s) 789, 879
Eam1104I CTCTTC 1 cut(s) 797
EarI CTCTTC 1 cut(s) 797
Eco130I CCWWGG 4 cut(s) 435, 462, 481, 910
Eco47I GGWCC 1 cut(s) 424
Eco57I CTGAAG 1 cut(s) 144
Eco81I CCTNAGG 2 cut(s) 864, 954
Eco88I CYCGRG 1 cut(s) 306
EcoNI CCTNNNNNAGG 1 cut(s) 752
EcoO109I RGGNCCY 2 cut(s) 424, 938
EcoRII CCWGG 1 cut(s) 753
EcoT14I CCWWGG 4 cut(s) 435, 462, 481, 910
ErhI CCWWGG 4 cut(s) 435, 462, 481, 910
FaeI CATG 5 cut(s) 91, 133, 439, 466, 703
FalI AAGNNNNNCTT 2 cut(s) 411, 443
FaqI GGGAC 2 cut(s) 163, 700
FatI CATG 5 cut(s) 87, 129, 435, 462, 699
FauI CCCGC 2 cut(s) 113, 114
Fnu4HI GCNGC 6 cut(s) 114, 186, 234, 237, 368, 648
FokI GGATG 1 cut(s) 323
Fsp4HI GCNGC 6 cut(s) 114, 186, 234, 237, 368, 648
FspBI CTAG 2 cut(s) 11, 749
FspI TGCGCA 1 cut(s) 729
GlaI GCGC 1 cut(s) 729
GluI GCNGC 6 cut(s) 114, 186, 234, 237, 368, 648
HaeIII GGCC 3 cut(s) 294, 486, 939
HapII CCGG 4 cut(s) 134, 165, 307, 394
HgaI GACGC 1 cut(s) 356
HhaI GCGC 1 cut(s) 730
Hin1II CATG 5 cut(s) 91, 133, 439, 466, 703
Hin6I GCGC 1 cut(s) 728
HinP1I GCGC 1 cut(s) 728
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HindIII AAGCTT 1 cut(s) 527
HinfI GANTC 3 cut(s) 504, 696, 859
HpaII CCGG 4 cut(s) 134, 165, 307, 394
HphI GGTGA 5 cut(s) 148, 275, 481, 799, 811
Hpy166II GTNNAC 1 cut(s) 571
Hpy188I TCNGA 4 cut(s) 206, 277, 902, 931
Hpy188III TCNNGA 2 cut(s) 863, 953
Hpy8I GTNNAC 1 cut(s) 571
Hpy99I CGWCG 2 cut(s) 350, 797
HpyAV CCTTC 3 cut(s) 168, 437, 929
HpyCH4III ACNGT 1 cut(s) 618
HpyCH4IV ACGT 2 cut(s) 152, 840
HpyCH4V TGCA 3 cut(s) 200, 522, 566
HpyF10VI GCNNNNNNNGC 6 cut(s) 97, 106, 126, 182, 206, 674
HpyF3I CTNAG 5 cut(s) 389, 611, 857, 864, 954
HpySE526I ACGT 2 cut(s) 152, 840
Hsp92II CATG 5 cut(s) 91, 133, 439, 466, 703
HspAI GCGC 1 cut(s) 728
KpnI GGTACC 1 cut(s) 910
KroI GCCGGC 1 cut(s) 164
KroNI GCCGGC 1 cut(s) 166
Kzo9I GATC 2 cut(s) 789, 879
LguI GCTCTTC 1 cut(s) 797
LmnI GCTCC 3 cut(s) 674, 853, 958
Lsp1109I GCAGC 5 cut(s) 197, 220, 223, 354, 659
LweI GCATC 1 cut(s) 702
MaeI CTAG 2 cut(s) 11, 749
MaeII ACGT 2 cut(s) 152, 840
MalI GATC 2 cut(s) 791, 881
MboI GATC 2 cut(s) 789, 879
MboII GAAGA 2 cut(s) 422, 814
MluCI AATT 5 cut(s) 95, 301, 400, 555, 888
MlyI GAGTC 3 cut(s) 513, 705, 868
MroNI GCCGGC 1 cut(s) 164
MseI TTAA 4 cut(s) 36, 416, 810, 825
MslI CAYNNNNRTG 2 cut(s) 22, 134
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 4 cut(s) 134, 165, 307, 394
MspR9I CCNGG 4 cut(s) 307, 308, 395, 755
MvaI CCWGG 1 cut(s) 755
MwoI GCNNNNNNNGC 6 cut(s) 97, 106, 126, 182, 206, 674
NaeI GCCGGC 1 cut(s) 166
NciI CCSGG 3 cut(s) 307, 308, 395
NcoI CCATGG 2 cut(s) 435, 462
NdeII GATC 2 cut(s) 789, 879
NgoMIV GCCGGC 1 cut(s) 164
NlaIII CATG 5 cut(s) 91, 133, 439, 466, 703
NlaIV GGNNCC 1 cut(s) 908
NsbI TGCGCA 1 cut(s) 729
NspI RCATGY 2 cut(s) 91, 133
PaeI GCATGC 2 cut(s) 91, 133
PciSI GCTCTTC 1 cut(s) 797
PdiI GCCGGC 1 cut(s) 166
PflMI CCANNNNNTGG 1 cut(s) 336
PkrI GCNGC 6 cut(s) 115, 187, 235, 238, 369, 649
PleI GAGTC 3 cut(s) 512, 704, 867
PpsI GAGTC 3 cut(s) 512, 704, 867
PpuMI RGGWCCY 1 cut(s) 424
Psp5II RGGWCCY 1 cut(s) 424
Psp6I CCWGG 1 cut(s) 753
PspGI CCWGG 1 cut(s) 753
PspN4I GGNNCC 1 cut(s) 908
PspPI GGNCC 2 cut(s) 424, 938
PspPPI RGGWCCY 1 cut(s) 424
PstI CTGCAG 1 cut(s) 568
RsaI GTAC 1 cut(s) 908
RsaNI GTAC 1 cut(s) 907
RseI CAYNNNNRTG 2 cut(s) 22, 134
SapI GCTCTTC 1 cut(s) 797
SaqAI TTAA 4 cut(s) 36, 416, 810, 825
SatI GCNGC 6 cut(s) 114, 186, 234, 237, 368, 648
Sau3AI GATC 2 cut(s) 789, 879
Sau96I GGNCC 2 cut(s) 424, 938
SchI GAGTC 3 cut(s) 513, 705, 868
ScrFI CCNGG 4 cut(s) 307, 308, 395, 755
SfaNI GCATC 1 cut(s) 702
SfcI CTRYAG 1 cut(s) 564
SinI GGWCC 1 cut(s) 424
SmaI CCCGGG 1 cut(s) 308
SmiMI CAYNNNNRTG 2 cut(s) 22, 134
SphI GCATGC 2 cut(s) 91, 133
Sse9I AATT 5 cut(s) 95, 301, 400, 555, 888
SsiI CCGC 3 cut(s) 107, 113, 120
SspI AATATT 1 cut(s) 835
SspMI CTAG 2 cut(s) 11, 749
StyD4I CCNGG 4 cut(s) 305, 306, 393, 753
StyI CCWWGG 4 cut(s) 435, 462, 481, 910
TaaI ACNGT 1 cut(s) 618
TaiI ACGT 2 cut(s) 155, 843
TaqI TCGA 1 cut(s) 48
TasI AATT 5 cut(s) 95, 301, 400, 555, 888
TauI GCSGC 1 cut(s) 116
Tru1I TTAA 4 cut(s) 36, 416, 810, 825
Tru9I TTAA 4 cut(s) 36, 416, 810, 825
TscAI CASTG 2 cut(s) 175, 553
TseI GCWGC 5 cut(s) 185, 233, 236, 367, 647
TspDTI ATGAA 5 cut(s) 310, 368, 599, 913, 948
TspGWI ACGGA 1 cut(s) 687
TspMI CCCGGG 1 cut(s) 306
TspRI CASTG 2 cut(s) 175, 553
Van91I CCANNNNNTGG 1 cut(s) 336
VpaK11BI GGWCC 1 cut(s) 424
XagI CCTNNNNNAGG 1 cut(s) 752
XapI RAATTY 3 cut(s) 400, 555, 888
XceI RCATGY 2 cut(s) 91, 133
XmaI CCCGGG 1 cut(s) 306
XspI CTAG 2 cut(s) 11, 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.