RLG00000035957

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
74025074 .. 74026759
1686 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035957

Sequence Viewer

Length: 1014 bp
ATGGGAAGCTTGCCAGTAGCCGAAAATGTCTTATCACGTTCCATCAACATTCCAGTGTTGCCACTGGTCTCATCATCAACTGGGAAAACAACCAACATTCCTGTTCTAGGTTTCGGAACTGCTACATACCCTTTTGTTGGCTCAGAAATCATAAAAGAAGCCATTCTCGATGCGATCAGAGTTGGCTACAGACATTTTGACACAGCCGCTCTTTACCAGACGGAGCAGAGTCTCGGTGAAGCCATTTCGGAAGCTCTTTCTCTTGGCCTCATCGAATCCCGGCAAGACCTCTTCATCACTTCCAAGCTGTGGTGCAGTGATGCTCACCCCCACCGTGTCTTACCTGCCATTCGCACTACGCTCAAGAACCTAGGACTGGAGTACCTTGATCTATATCTCATTCACTGGCCGGTCAGCGTGAAGCTGGGAAACTATGACTTTCCGTTTGACAAAGAGGACCTTCTTCCAATCAACTTCAAGGGTGTGTGGGAAGTCATGGAGGAATGCCAGAAGCTAGGCCTCACTAAATCTATAGGAGTTAGCAACTTCTCATGCAAAAAGATGCAGAACTTGCTAGCCACTGCTAAAATCCCTCCTGCAGTCAACCAAGTGGAGATGAACCCGCTTTGGCAGCAGAGAAAGCTAAGAGAGTTTTGCCAGAAAAATGGTATACTAATCATGGCCTACTCTCCTTTGGGAGCAAAAGGAACACCTTGGGGATCAAATGGAGTCATGGAATCTGAGACGCTCACGCAGATTGCAGATGCGAAAGGGAAAACCCTTGCCCAGATTTGTCTGAGGTGGGCATACGAGCAAGAGGTGAGTTTCGTGGTGAAAAGCTTCAGTAAGGAGAGGATTAGTGAAAATGGTGATATATTTGAGTGGGAGCTTTGTCCAGAGGAGGTGGAGAAGATCAATCAAATTCCACAGAAAAGAGGATTTCCTGCATTCGACTTCGTTGCGGATCATGGCCCTTACAAGACTCTTGAGGAACTGTGGGATGGAGAGATTTAA

Protein Analysis

338

Amino Acids

37.76

Weight (kDa)

5.33

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 36 - 308 6.3e-54 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G59950 AT1G59960
fragaria_vesca FvH4_2g01280 FvH4_3g20300 FvH4_3g20300 FvH4_4g25591 FvH4_4g25600 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25612 FvH4_4g25612 FvH4_4g25620 FvH4_4g35840
malus_domestica MD04G1063200.v1.1 MD10G1055100.v1.1 MD13G1014700.v1.1 MD13G1101200.v1.1 MD16G1101500.v1.1
prunus_persica Prupe.1G244700_v2.0.a1 Prupe.1G245100_v2.0.a1 Prupe.1G245400_v2.0.a1 Prupe.1G338900_v2.0.a1 Prupe.5G239400_v2.0.a1
pyrus_communis pycom13g08830 pycom16g01150 pycom16g08620
rosa_chinensis RchiOBHm_Chr1g0329311 RchiOBHm_Chr3g0483001 RchiOBHm_Chr4g0395321 RchiOBHm_Chr4g0433021 RchiOBHm_Chr4g0445371 RchiOBHm_Chr4g0445381 RchiOBHm_Chr4g0445421 RchiOBHm_Chr5g0023771 RchiOBHm_Chr5g0023781 RchiOBHm_Chr5g0068101 RchiOBHm_Chr5g0068111 RchiOBHm_Chr6g0281251 RchiOBHm_Chr7g0225361
rosa_laevigata RLG00000001827 RLG00000005742 RLG00000005743 RLG00000005744 RLG00000006791 RLG00000009629 RLG00000012981 RLG00000023308 RLG00000029902 RLG00000032738 RLG00000032739 RLG00000035956 RLG00000035957
rosa_multiflora Rmu_co7982306.1_g000001 Rmu_co8108716.1_g000001 Rmu_co8139310.1_g000001 Rmu_co8479199.1_g000001 Rmu_sc0000050.1_g000005 Rmu_sc0000050.1_g000006 Rmu_sc0000847.1_g000048 Rmu_sc0001372.1_g000008 Rmu_sc0001762.1_g000035 Rmu_sc0002791.1_g000001 Rmu_sc0002791.1_g000002 Rmu_sc0002791.1_g000005 Rmu_sc0003252.1_g000001 Rmu_sc0003351.1_g000013 Rmu_sc0006184.1_g000008 Rmu_sc0009518.1_g000006 Rmu_sc0010817.1_g000030 Rmu_sc0016867.1_g000002 Rmu_ssc0000027.1_g000010
rosa_roxburghii Rroxscaffold_1G00012480 Rroxscaffold_1G00012490 Rroxscaffold_1G00013240 Rroxscaffold_1G00013250 Rroxscaffold_1G00055410 Rroxscaffold_1G00055420 Rroxscaffold_3G00233890 Rroxscaffold_4G00321220 Rroxscaffold_5G00340230 Rroxscaffold_5G00340260 Rroxscaffold_6G00398750 Rroxscaffold_7G00187200
rosa_rugosa Rorug01G0078500 Rorug03G0202900 Rorug03G0358000 Rorug04G0361100 Rorug04G0361200 Rorug05G0079600 Rorug06G0140100 Rorug07G0228800
rosa_samantha Rh1AG096900 Rh1BG077500 Rh1CG093800 Rh1DG100300 Rh1DG100400 Rh4AG058500 Rh4AG318800 Rh4AG422300 Rh4AG422400 Rh4BG057300 Rh4BG326900 Rh4BG327000 Rh4BG434300 Rh4BG434600 Rh4CG063100 Rh4CG342300 Rh4CG342400 Rh4CG449100 Rh4CG449200 Rh4CG449300 Rh4CG449500 Rh4DG054000 Rh4DG054100 Rh4DG322100 Rh4DG430300 Rh4DG430400 Rh4DG430800 Rh5AG446700 Rh5AG446800 Rh5BG167000 Rh5BG465000 Rh5CG182600 Rh5DG168900 Rh5DG169000 Rh5DG478700 Rh6AG251900 Rh6BG255300 Rh6CG254700 Rh6DG246500 Rh7AG374400 Rh7BG363700 Rh7CG392700 Rh7CG392800 Rh7DG374500 Rh7DG374600
rosa_wichuraiana Rw0G001550 Rw0G005020 Rw1G007510 Rw1G007530 Rw1G007570 Rw3G022750 Rw4G004710 Rw4G027720 Rw4G036230 Rw4G036240 Rw5G015340 Rw6G021880 Rw7G031610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 352
AccB7I CCANNNNNTGG 1 cut(s) 309
AccBSI CCGCTC 1 cut(s) 209
AccI GTMKAC 1 cut(s) 670
AciI CCGC 3 cut(s) 207, 623, 962
AclWI GGATC 2 cut(s) 727, 972
AcoI YGGCCR 1 cut(s) 407
AcsI RAATTY 1 cut(s) 921
AcuI CTGAAG 1 cut(s) 826
AfaI GTAC 1 cut(s) 383
AfiI CCNNNNNNNGG 4 cut(s) 107, 137, 309, 376
AgsI TTSAA 1 cut(s) 478
AluBI AGCT 8 cut(s) 9, 254, 307, 424, 514, 643, 840, 889
AluI AGCT 8 cut(s) 9, 254, 307, 424, 514, 643, 840, 889
Alw26I GTCTC 3 cut(s) 73, 236, 737
AlwI GGATC 2 cut(s) 727, 972
AoxI GGCC 5 cut(s) 265, 407, 517, 681, 970
ApeKI GCWGC 1 cut(s) 631
ApoI RAATTY 1 cut(s) 921
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
Asp700I GAANNNNTTC 2 cut(s) 162, 839
AspA2I CCTAGG 1 cut(s) 370
AspS9I GGNCC 2 cut(s) 457, 971
AsuC2I CCSGG 1 cut(s) 280
AsuHPI GGTGA 5 cut(s) 248, 317, 832, 844, 881
AsuNHI GCTAGC 1 cut(s) 574
AvaII GGWCC 1 cut(s) 457
AvrII CCTAGG 1 cut(s) 370
BaeI ACNNNNGTAYC 2 cut(s) 365, 398
BbvI GCAGC 1 cut(s) 643
BccI CCATC 2 cut(s) 50, 995
BcgI CGANNNNNNTGC 2 cut(s) 941, 975
BcnI CCSGG 1 cut(s) 280
BcoDI GTCTC 3 cut(s) 73, 236, 737
BfaI CTAG 4 cut(s) 107, 371, 515, 575
BfmI CTRYAG 3 cut(s) 187, 531, 597
BfuAI ACCTGC 1 cut(s) 352
BisI GCNGC 2 cut(s) 207, 632
BlnI CCTAGG 1 cut(s) 370
BlsI GCNGC 2 cut(s) 208, 633
Bme1390I CCNGG 1 cut(s) 280
Bme18I GGWCC 1 cut(s) 457
BmgT120I GGNCC 2 cut(s) 457, 971
BmrFI CCNGG 1 cut(s) 280
BmrI ACTGGG 1 cut(s) 90
BmsI GCATC 4 cut(s) 160, 310, 552, 754
BmtI GCTAGC 1 cut(s) 578
BmuI ACTGGG 1 cut(s) 90
BpmI CTGGAG 1 cut(s) 398
BpuEI CTTGAG 2 cut(s) 347, 1007
BpuMI CCSGG 1 cut(s) 280
BsaBI GATNNNNATC 1 cut(s) 393
BsaI GGTCTC 1 cut(s) 73
BsaJI CCNNGG 2 cut(s) 370, 713
Bsc4I CCNNNNNNNGG 4 cut(s) 107, 137, 309, 376
Bse118I RCCGGY 1 cut(s) 409
Bse1I ACTGG 6 cut(s) 14, 53, 69, 85, 381, 410
Bse8I GATNNNNATC 1 cut(s) 393
BseDI CCNNGG 2 cut(s) 370, 713
BseGI GGATG 1 cut(s) 1006
BseJI GATNNNNATC 1 cut(s) 393
BseLI CCNNNNNNNGG 4 cut(s) 107, 137, 309, 376
BseMII CTCAG 3 cut(s) 156, 732, 788
BseNI ACTGG 6 cut(s) 14, 53, 69, 85, 381, 410
BseRI GAGGAG 1 cut(s) 914
BseXI GCAGC 1 cut(s) 643
BseYI CCCAGC 1 cut(s) 424
BsgI GTGCAG 1 cut(s) 334
BshFI GGCC 5 cut(s) 267, 409, 519, 683, 972
BsiSI CCGG 2 cut(s) 280, 410
BslI CCNNNNNNNGG 4 cut(s) 107, 137, 309, 376
BsmAI GTCTC 3 cut(s) 73, 236, 737
BsmBI CGTCTC 1 cut(s) 737
BsmI GAATGC 2 cut(s) 509, 947
BsnI GGCC 5 cut(s) 267, 409, 519, 683, 972
Bso31I GGTCTC 1 cut(s) 73
Bsp143I GATC 5 cut(s) 174, 388, 719, 912, 964
BspACI CCGC 3 cut(s) 207, 623, 962
BspANI GGCC 5 cut(s) 267, 409, 519, 683, 972
BspCNI CTCAG 3 cut(s) 155, 733, 789
BspMAI CTGCAG 1 cut(s) 601
BspMI ACCTGC 1 cut(s) 352
BspOI GCTAGC 1 cut(s) 578
BspPI GGATC 2 cut(s) 727, 972
BspTNI GGTCTC 1 cut(s) 73
BsrBI CCGCTC 1 cut(s) 209
BsrFI RCCGGY 1 cut(s) 409
BsrI ACTGG 6 cut(s) 14, 53, 69, 85, 381, 410
BssAI RCCGGY 1 cut(s) 409
BssECI CCNNGG 2 cut(s) 370, 713
BssMI GATC 5 cut(s) 174, 388, 719, 912, 964
BssNAI GTATAC 1 cut(s) 671
BssT1I CCWWGG 2 cut(s) 370, 713
Bst1107I GTATAC 1 cut(s) 671
Bst4CI ACNGT 2 cut(s) 335, 996
Bst6I CTCTTC 1 cut(s) 296
BstAPI GCANNNNNTGC 1 cut(s) 571
BstC8I GCNNGC 2 cut(s) 11, 576
BstDEI CTNAG 4 cut(s) 142, 644, 741, 797
BstENI CCTNNNNNAGG 1 cut(s) 105
BstF5I GGATG 1 cut(s) 1006
BstKTI GATC 5 cut(s) 177, 391, 722, 915, 967
BstMAI GTCTC 3 cut(s) 73, 236, 737
BstMBI GATC 5 cut(s) 174, 388, 719, 912, 964
BstMWI GCNNNNNNNGC 3 cut(s) 571, 631, 640
BstSCI CCNGG 1 cut(s) 278
BstSFI CTRYAG 3 cut(s) 187, 531, 597
BstV1I GCAGC 1 cut(s) 643
BstXI CCANNNNNNTGG 1 cut(s) 665
BstZ17I GTATAC 1 cut(s) 671
BsuRI GGCC 5 cut(s) 267, 409, 519, 683, 972
BtsCI GGATG 1 cut(s) 1006
BtsI GCAGTG 2 cut(s) 322, 579
BtsIMutI CAGTG 5 cut(s) 60, 62, 322, 403, 579
BveI ACCTGC 1 cut(s) 352
Cac8I GCNNGC 2 cut(s) 11, 576
Cfr10I RCCGGY 1 cut(s) 409
Cfr13I GGNCC 2 cut(s) 457, 971
CseI GACGC 1 cut(s) 754
Csp6I GTAC 1 cut(s) 382
CviAII CATG 5 cut(s) 496, 552, 679, 733, 968
CviQI GTAC 1 cut(s) 382
DdeI CTNAG 4 cut(s) 142, 644, 741, 797
DpnI GATC 5 cut(s) 176, 390, 721, 914, 966
DpnII GATC 5 cut(s) 174, 388, 719, 912, 964
EaeI YGGCCR 1 cut(s) 407
Eam1104I CTCTTC 1 cut(s) 296
EarI CTCTTC 1 cut(s) 296
Eco130I CCWWGG 2 cut(s) 370, 713
Eco147I AGGCCT 1 cut(s) 519
Eco31I GGTCTC 1 cut(s) 73
Eco47I GGWCC 1 cut(s) 457
Eco57I CTGAAG 1 cut(s) 826
EcoNI CCTNNNNNAGG 1 cut(s) 105
EcoO109I RGGNCCY 1 cut(s) 457
EcoT14I CCWWGG 2 cut(s) 370, 713
ErhI CCWWGG 2 cut(s) 370, 713
Esp3I CGTCTC 1 cut(s) 737
FaeI CATG 5 cut(s) 499, 555, 682, 736, 971
FalI AAGNNNNNCTT 2 cut(s) 444, 476
FatI CATG 5 cut(s) 495, 551, 678, 732, 967
FauI CCCGC 1 cut(s) 630
FblI GTMKAC 1 cut(s) 670
Fnu4HI GCNGC 2 cut(s) 207, 632
Fsp4HI GCNGC 2 cut(s) 207, 632
FspBI CTAG 4 cut(s) 107, 371, 515, 575
GluI GCNGC 2 cut(s) 207, 632
GsaI CCCAGC 1 cut(s) 428
GsuI CTGGAG 1 cut(s) 398
HaeIII GGCC 5 cut(s) 267, 409, 519, 683, 972
HapII CCGG 2 cut(s) 280, 410
HgaI GACGC 1 cut(s) 754
Hin1II CATG 5 cut(s) 499, 555, 682, 736, 971
HincII GTYRAC 1 cut(s) 604
HindII GTYRAC 1 cut(s) 604
HindIII AAGCTT 2 cut(s) 7, 838
HinfI GANTC 5 cut(s) 229, 275, 729, 737, 982
HpaII CCGG 2 cut(s) 280, 410
HphI GGTGA 5 cut(s) 248, 317, 832, 844, 881
Hpy166II GTNNAC 2 cut(s) 604, 671
Hpy188I TCNGA 6 cut(s) 116, 145, 179, 250, 742, 798
Hpy188III TCNNGA 4 cut(s) 167, 364, 896, 986
Hpy8I GTNNAC 2 cut(s) 604, 671
HpyAV CCTTC 1 cut(s) 470
HpyCH4III ACNGT 2 cut(s) 335, 996
HpyCH4IV ACGT 1 cut(s) 37
HpyCH4V TGCA 6 cut(s) 315, 555, 565, 599, 761, 947
HpyF10VI GCNNNNNNNGC 3 cut(s) 571, 631, 640
HpyF3I CTNAG 4 cut(s) 142, 644, 741, 797
HpySE526I ACGT 1 cut(s) 37
Hsp92II CATG 5 cut(s) 499, 555, 682, 736, 971
Kzo9I GATC 5 cut(s) 174, 388, 719, 912, 964
LmnI GCTCC 3 cut(s) 223, 698, 886
Lsp1109I GCAGC 1 cut(s) 643
LweI GCATC 4 cut(s) 160, 310, 552, 754
MaeI CTAG 4 cut(s) 107, 371, 515, 575
MaeII ACGT 1 cut(s) 37
MalI GATC 5 cut(s) 176, 390, 721, 914, 966
MbiI CCGCTC 1 cut(s) 209
MboI GATC 5 cut(s) 174, 388, 719, 912, 964
MboII GAAGA 3 cut(s) 283, 455, 922
MluCI AATT 1 cut(s) 921
MlyI GAGTC 3 cut(s) 238, 738, 976
MroXI GAANNNNTTC 2 cut(s) 162, 839
MseI TTAA 1 cut(s) 1012
MslI CAYNNNNRTG 1 cut(s) 53
MspI CCGG 2 cut(s) 280, 410
MspR9I CCNGG 1 cut(s) 280
Mva1269I GAATGC 2 cut(s) 509, 947
MwoI GCNNNNNNNGC 3 cut(s) 571, 631, 640
NciI CCSGG 1 cut(s) 280
NdeII GATC 5 cut(s) 174, 388, 719, 912, 964
NheI GCTAGC 1 cut(s) 574
NlaIII CATG 5 cut(s) 499, 555, 682, 736, 971
PceI AGGCCT 1 cut(s) 519
PctI GAATGC 2 cut(s) 509, 947
PdmI GAANNNNTTC 2 cut(s) 162, 839
PfeI GAWTC 2 cut(s) 275, 737
PflMI CCANNNNNTGG 1 cut(s) 309
PkrI GCNGC 2 cut(s) 208, 633
PleI GAGTC 3 cut(s) 237, 737, 976
PpsI GAGTC 3 cut(s) 237, 737, 976
PpuMI RGGWCCY 1 cut(s) 457
Psp5II RGGWCCY 1 cut(s) 457
PspFI CCCAGC 1 cut(s) 424
PspPI GGNCC 2 cut(s) 457, 971
PspPPI RGGWCCY 1 cut(s) 457
PstI CTGCAG 1 cut(s) 601
RsaI GTAC 1 cut(s) 383
RsaNI GTAC 1 cut(s) 382
RseI CAYNNNNRTG 1 cut(s) 53
SaqAI TTAA 1 cut(s) 1012
SatI GCNGC 2 cut(s) 207, 632
Sau3AI GATC 5 cut(s) 174, 388, 719, 912, 964
Sau96I GGNCC 2 cut(s) 457, 971
SchI GAGTC 3 cut(s) 238, 738, 976
ScrFI CCNGG 1 cut(s) 280
SfaNI GCATC 4 cut(s) 160, 310, 552, 754
SfcI CTRYAG 3 cut(s) 187, 531, 597
SinI GGWCC 1 cut(s) 457
SmiMI CAYNNNNRTG 1 cut(s) 53
SmlI CTYRAG 2 cut(s) 362, 986
SmoI CTYRAG 2 cut(s) 362, 986
Sse9I AATT 1 cut(s) 921
SseBI AGGCCT 1 cut(s) 519
SsiI CCGC 3 cut(s) 207, 623, 962
SspMI CTAG 4 cut(s) 107, 371, 515, 575
StuI AGGCCT 1 cut(s) 519
StyD4I CCNGG 1 cut(s) 278
StyI CCWWGG 2 cut(s) 370, 713
TaaI ACNGT 2 cut(s) 335, 996
TaiI ACGT 1 cut(s) 40
TaqI TCGA 3 cut(s) 168, 273, 951
TasI AATT 1 cut(s) 921
TauI GCSGC 1 cut(s) 209
TfiI GAWTC 2 cut(s) 275, 737
Tru1I TTAA 1 cut(s) 1012
Tru9I TTAA 1 cut(s) 1012
TscAI CASTG 5 cut(s) 60, 69, 322, 410, 586
TseI GCWGC 1 cut(s) 631
TspDTI ATGAA 2 cut(s) 283, 632
TspGWI ACGGA 2 cut(s) 236, 432
TspRI CASTG 5 cut(s) 60, 69, 322, 410, 586
Van91I CCANNNNNTGG 1 cut(s) 309
VpaK11BI GGWCC 1 cut(s) 457
XagI CCTNNNNNAGG 1 cut(s) 105
XapI RAATTY 1 cut(s) 921
XmaJI CCTAGG 1 cut(s) 370
XmiI GTMKAC 1 cut(s) 670
XmnI GAANNNNTTC 2 cut(s) 162, 839
XspI CTAG 4 cut(s) 107, 371, 515, 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.