RchiOBHm_Chr4g0445421

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
65885374 .. 65887139
1766 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41301

Sequence Viewer

Length: 1026 bp
ATGGATCACTTACATAATCCAAAATGTGGATCTTGTATGGAGATATCTCGAAAATGGAGAACATATATAAGCAATATTCCAGAGTTGGCGCTAACCATCGTCCCAAGTAGTATTGCAAGTGATAAAAGCAGTATTCCGGTGCTAGGTTTAGGAACAGCTGCATATCCTTTTGTTGCCTCTGAAGCAGCGAAAGAAGCCATTCTCACTGCAATCCAAGTCGGCTACAGACATTTTGATACCGCTGCTGTTTACCAGACGGAGCAACTTCTTGGTGAAGCCATTGCCGAAGCTCTTTCACTTGAGCTCGTCAAATCCCGGGATGAGCTTTTTTTACTTCCAAGCTTTGGTGCACGGATGCACACCATCACCTTGTCCTGCCTGCCATTCATAAAACACTCAAATTTGTATCTCATTCATTGGCCTGTGAGTTTTGAGCCGGGAAGCTATGACATGCCTGTTAAGAAAGAGGATCTTCTTCCTATGGACTTCAAGTCTGTGTGGGAAGCAATGGAAGAGTGCCAGAAGCTAGGCCTCACCAAGGCAATAGGAGTCAGCAATTTCTCATGCAAAAAGATAGAAATCTTGCTTTCCACTGCAATAATCCCTCCTGCTGTCAACCAAGTGGAGATGAACCCGCTATGGCAGCAGAAAAAGCTGAAAGAGTTTTGTGAAAGAAAAGGTATAATCATCACTGCCTACTCTCCGTTGGGGGCAAAAGCGACACCGTGGGGAACAAATGGAGTTATGGAATGTGAGACTCTCAAACAAATTGCTGAAACAAAAAGGAAAACTCTTGCTCAGGTTTGTCTGAGATGGGCATATGAGCAAGGGGTGAGTGTGGTGGTGAAGAGCTTTAACAAGGAGAGGATTAAGGAAAATATGGACATATTTGAATGGGAGTTGCAGCCTGAGGAAGTTGACAAGATCAATCAAATTCCACAAAAGAGAGCATGCCAAGCATCCGACTTCGTTTCAGATAATGGCCCTTTCAAGTCTCTTGAAGAGTTTTGGGATGGAGAGATTTAA

Protein Analysis

341

Amino Acids

38.36

Weight (kDa)

5.67

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 48 - 111 3.9e-09 Aldo/keto reductase family
Aldo_ket_red PF00248 133 - 312 8.1e-35 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G59950 AT1G59960
fragaria_vesca FvH4_2g01280 FvH4_3g20300 FvH4_3g20300 FvH4_4g25591 FvH4_4g25600 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25610 FvH4_4g25612 FvH4_4g25612 FvH4_4g25620 FvH4_4g35840
malus_domestica MD04G1063200.v1.1 MD10G1055100.v1.1 MD13G1014700.v1.1 MD13G1101200.v1.1 MD16G1101500.v1.1
prunus_persica Prupe.1G244700_v2.0.a1 Prupe.1G245100_v2.0.a1 Prupe.1G245400_v2.0.a1 Prupe.1G338900_v2.0.a1 Prupe.5G239400_v2.0.a1
pyrus_communis pycom13g08830 pycom16g01150 pycom16g08620
rosa_chinensis RchiOBHm_Chr1g0329311 RchiOBHm_Chr3g0483001 RchiOBHm_Chr4g0395321 RchiOBHm_Chr4g0433021 RchiOBHm_Chr4g0445371 RchiOBHm_Chr4g0445381 RchiOBHm_Chr4g0445421 RchiOBHm_Chr5g0023771 RchiOBHm_Chr5g0023781 RchiOBHm_Chr5g0068101 RchiOBHm_Chr5g0068111 RchiOBHm_Chr6g0281251 RchiOBHm_Chr7g0225361
rosa_laevigata RLG00000001827 RLG00000005742 RLG00000005743 RLG00000005744 RLG00000006791 RLG00000009629 RLG00000012981 RLG00000023308 RLG00000029902 RLG00000032738 RLG00000032739 RLG00000035956 RLG00000035957
rosa_multiflora Rmu_co7982306.1_g000001 Rmu_co8108716.1_g000001 Rmu_co8139310.1_g000001 Rmu_co8479199.1_g000001 Rmu_sc0000050.1_g000005 Rmu_sc0000050.1_g000006 Rmu_sc0000847.1_g000048 Rmu_sc0001372.1_g000008 Rmu_sc0001762.1_g000035 Rmu_sc0002791.1_g000001 Rmu_sc0002791.1_g000002 Rmu_sc0002791.1_g000005 Rmu_sc0003252.1_g000001 Rmu_sc0003351.1_g000013 Rmu_sc0006184.1_g000008 Rmu_sc0009518.1_g000006 Rmu_sc0010817.1_g000030 Rmu_sc0016867.1_g000002 Rmu_ssc0000027.1_g000010
rosa_roxburghii Rroxscaffold_1G00012480 Rroxscaffold_1G00012490 Rroxscaffold_1G00013240 Rroxscaffold_1G00013250 Rroxscaffold_1G00055410 Rroxscaffold_1G00055420 Rroxscaffold_3G00233890 Rroxscaffold_4G00321220 Rroxscaffold_5G00340230 Rroxscaffold_5G00340260 Rroxscaffold_6G00398750 Rroxscaffold_7G00187200
rosa_rugosa Rorug01G0078500 Rorug03G0202900 Rorug03G0358000 Rorug04G0361100 Rorug04G0361200 Rorug05G0079600 Rorug06G0140100 Rorug07G0228800
rosa_samantha Rh1AG096900 Rh1BG077500 Rh1CG093800 Rh1DG100300 Rh1DG100400 Rh4AG058500 Rh4AG318800 Rh4AG422300 Rh4AG422400 Rh4BG057300 Rh4BG326900 Rh4BG327000 Rh4BG434300 Rh4BG434600 Rh4CG063100 Rh4CG342300 Rh4CG342400 Rh4CG449100 Rh4CG449200 Rh4CG449300 Rh4CG449500 Rh4DG054000 Rh4DG054100 Rh4DG322100 Rh4DG430300 Rh4DG430400 Rh4DG430800 Rh5AG446700 Rh5AG446800 Rh5BG167000 Rh5BG465000 Rh5CG182600 Rh5DG168900 Rh5DG169000 Rh5DG478700 Rh6AG251900 Rh6BG255300 Rh6CG254700 Rh6DG246500 Rh7AG374400 Rh7BG363700 Rh7CG392700 Rh7CG392800 Rh7DG374500 Rh7DG374600
rosa_wichuraiana Rw0G001550 Rw0G005020 Rw1G007510 Rw1G007530 Rw1G007570 Rw3G022750 Rw4G004710 Rw4G027720 Rw4G036230 Rw4G036240 Rw5G015340 Rw6G021880 Rw7G031610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 26, 344
AciI CCGC 2 cut(s) 240, 635
AclWI GGATC 3 cut(s) 12, 37, 477
AcsI RAATTY 2 cut(s) 400, 933
AcuI CTGAAG 1 cut(s) 201
AfiI CCNNNNNNNGG 4 cut(s) 26, 143, 344, 538
AgsI TTSAA 4 cut(s) 490, 893, 991, 1001
AhdI GACNNNNNGTC 1 cut(s) 490
AluBI AGCT 9 cut(s) 158, 290, 304, 325, 342, 444, 526, 655, 852
AluI AGCT 9 cut(s) 158, 290, 304, 325, 342, 444, 526, 655, 852
Alw21I GWGCWC 2 cut(s) 306, 352
Alw26I GTCTC 2 cut(s) 749, 999
Alw44I GTGCAC 1 cut(s) 348
AlwI GGATC 3 cut(s) 12, 37, 477
Ama87I CYCGRG 1 cut(s) 315
AoxI GGCC 3 cut(s) 419, 529, 982
ApaLI GTGCAC 1 cut(s) 348
ApeKI GCWGC 5 cut(s) 158, 185, 242, 643, 904
ApoI RAATTY 2 cut(s) 400, 933
Asp700I GAANNNNTTC 1 cut(s) 198
AspLEI GCGC 1 cut(s) 91
AspS9I GGNCC 1 cut(s) 983
AsuC2I CCSGG 3 cut(s) 316, 317, 438
AsuHPI GGTGA 5 cut(s) 284, 358, 526, 844, 856
AvaI CYCGRG 1 cut(s) 315
AxyI CCTNAGG 1 cut(s) 909
BaeGI GKGCMC 1 cut(s) 352
BanII GRGCYC 1 cut(s) 306
Bbv12I GWGCWC 2 cut(s) 306, 352
BbvI GCAGC 5 cut(s) 145, 197, 229, 655, 916
BccI CCATC 4 cut(s) 104, 371, 807, 1007
BcnI CCSGG 3 cut(s) 316, 317, 438
BcoDI GTCTC 2 cut(s) 749, 999
BfaI CTAG 2 cut(s) 143, 527
BfmI CTRYAG 1 cut(s) 223
BfoI RGCGCY 1 cut(s) 92
BisI GCNGC 5 cut(s) 159, 186, 243, 644, 905
BlsI GCNGC 5 cut(s) 160, 187, 244, 645, 906
Bme1390I CCNGG 3 cut(s) 316, 317, 438
BmeRI GACNNNNNGTC 1 cut(s) 490
BmeT110I CYCGRG 1 cut(s) 315
BmgT120I GGNCC 1 cut(s) 983
BmrFI CCNGG 3 cut(s) 316, 317, 438
BmsI GCATC 2 cut(s) 345, 968
Bpu10I CCTNAGC 1 cut(s) 798
BpuEI CTTGAG 1 cut(s) 320
BpuMI CCSGG 3 cut(s) 316, 317, 438
BsaBI GATNNNNATC 1 cut(s) 578
BsaJI CCNNGG 3 cut(s) 315, 537, 725
BsaWI WCCGGW 1 cut(s) 136
Bsc4I CCNNNNNNNGG 4 cut(s) 26, 143, 344, 538
Bse21I CCTNAGG 1 cut(s) 909
Bse3DI GCAATG 2 cut(s) 279, 513
Bse8I GATNNNNATC 1 cut(s) 578
BseDI CCNNGG 3 cut(s) 315, 537, 725
BseGI GGATG 4 cut(s) 325, 360, 959, 1018
BseJI GATNNNNATC 1 cut(s) 578
BseLI CCNNNNNNNGG 4 cut(s) 26, 143, 344, 538
BseMI GCAATG 2 cut(s) 279, 513
BseMII CTCAG 3 cut(s) 800, 812, 900
BseSI GKGCMC 1 cut(s) 352
BseXI GCAGC 5 cut(s) 145, 197, 229, 655, 916
BshFI GGCC 3 cut(s) 421, 531, 984
BsiHKAI GWGCWC 2 cut(s) 306, 352
BsiHKCI CYCGRG 1 cut(s) 315
BsiSI CCGG 3 cut(s) 137, 316, 437
BslFI GGGAC 1 cut(s) 86
BslI CCNNNNNNNGG 4 cut(s) 26, 143, 344, 538
BsmAI GTCTC 2 cut(s) 749, 999
BsmFI GGGAC 1 cut(s) 86
BsnI GGCC 3 cut(s) 421, 531, 984
BsoBI CYCGRG 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 306, 352
Bsp143I GATC 4 cut(s) 4, 29, 469, 924
BspACI CCGC 2 cut(s) 240, 635
BspANI GGCC 3 cut(s) 421, 531, 984
BspCNI CTCAG 3 cut(s) 801, 811, 901
BspPI GGATC 3 cut(s) 12, 37, 477
BspQI GCTCTTC 1 cut(s) 842
BsrDI GCAATG 2 cut(s) 279, 513
BssECI CCNNGG 3 cut(s) 315, 537, 725
BssMI GATC 4 cut(s) 4, 29, 469, 924
BssT1I CCWWGG 1 cut(s) 537
Bst4CI ACNGT 1 cut(s) 726
Bst6I CTCTTC 3 cut(s) 507, 842, 996
BstC8I GCNNGC 2 cut(s) 380, 952
BstDEI CTNAG 3 cut(s) 798, 809, 909
BstDSI CCRYGG 1 cut(s) 725
BstENI CCTNNNNNAGG 1 cut(s) 536
BstF5I GGATG 4 cut(s) 325, 360, 959, 1018
BstH2I RGCGCY 1 cut(s) 92
BstHHI GCGC 1 cut(s) 91
BstKTI GATC 4 cut(s) 7, 32, 472, 927
BstMAI GTCTC 2 cut(s) 749, 999
BstMBI GATC 4 cut(s) 4, 29, 469, 924
BstMWI GCNNNNNNNGC 5 cut(s) 182, 194, 643, 652, 956
BstNSI RCATGY 2 cut(s) 454, 954
BstSCI CCNGG 3 cut(s) 314, 315, 436
BstSFI CTRYAG 1 cut(s) 223
BstSLI GKGCMC 1 cut(s) 352
BstV1I GCAGC 5 cut(s) 145, 197, 229, 655, 916
BstX2I RGATCY 2 cut(s) 29, 469
BstYI RGATCY 2 cut(s) 29, 469
Bsu36I CCTNAGG 1 cut(s) 909
BsuRI GGCC 3 cut(s) 421, 531, 984
BtgI CCRYGG 1 cut(s) 725
BtsCI GGATG 4 cut(s) 325, 360, 959, 1018
BtsI GCAGTG 3 cut(s) 204, 591, 690
BtsIMutI CAGTG 3 cut(s) 204, 591, 690
Cac8I GCNNGC 2 cut(s) 380, 952
CfoI GCGC 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 983
Cfr9I CCCGGG 1 cut(s) 315
CviAII CATG 3 cut(s) 451, 564, 951
DdeI CTNAG 3 cut(s) 798, 809, 909
DpnI GATC 4 cut(s) 6, 31, 471, 926
DpnII GATC 4 cut(s) 4, 29, 469, 924
DriI GACNNNNNGTC 1 cut(s) 490
Eam1104I CTCTTC 3 cut(s) 507, 842, 996
Eam1105I GACNNNNNGTC 1 cut(s) 490
EarI CTCTTC 3 cut(s) 507, 842, 996
Ecl136II GAGCTC 1 cut(s) 304
Eco130I CCWWGG 1 cut(s) 537
Eco147I AGGCCT 1 cut(s) 531
Eco24I GRGCYC 1 cut(s) 306
Eco32I GATATC 1 cut(s) 45
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 1 cut(s) 201
Eco81I CCTNAGG 1 cut(s) 909
Eco88I CYCGRG 1 cut(s) 315
EcoICRI GAGCTC 1 cut(s) 304
EcoNI CCTNNNNNAGG 1 cut(s) 536
EcoRV GATATC 1 cut(s) 45
EcoT14I CCWWGG 1 cut(s) 537
EcoT38I GRGCYC 1 cut(s) 306
ErhI CCWWGG 1 cut(s) 537
FaeI CATG 3 cut(s) 454, 567, 954
FalI AAGNNNNNCTT 2 cut(s) 456, 488
FaqI GGGAC 1 cut(s) 86
FatI CATG 3 cut(s) 450, 563, 950
FauI CCCGC 1 cut(s) 642
FauNDI CATATG 1 cut(s) 820
Fnu4HI GCNGC 5 cut(s) 159, 186, 243, 644, 905
FokI GGATG 3 cut(s) 332, 367, 946
FriOI GRGCYC 1 cut(s) 306
Fsp4HI GCNGC 5 cut(s) 159, 186, 243, 644, 905
FspBI CTAG 2 cut(s) 143, 527
GlaI GCGC 1 cut(s) 90
GluI GCNGC 5 cut(s) 159, 186, 243, 644, 905
HaeII RGCGCY 1 cut(s) 92
HaeIII GGCC 3 cut(s) 421, 531, 984
HapII CCGG 3 cut(s) 137, 316, 437
HhaI GCGC 1 cut(s) 91
Hin1II CATG 3 cut(s) 454, 567, 954
Hin6I GCGC 1 cut(s) 89
HinP1I GCGC 1 cut(s) 89
HincII GTYRAC 2 cut(s) 616, 919
HindII GTYRAC 2 cut(s) 616, 919
HindIII AAGCTT 1 cut(s) 340
HinfI GANTC 2 cut(s) 549, 757
HpaII CCGG 3 cut(s) 137, 316, 437
HphI GGTGA 5 cut(s) 284, 358, 526, 844, 856
Hpy166II GTNNAC 4 cut(s) 250, 350, 616, 919
Hpy188I TCNGA 4 cut(s) 181, 810, 964, 976
Hpy188III TCNNGA 3 cut(s) 48, 80, 998
Hpy8I GTNNAC 4 cut(s) 250, 350, 616, 919
HpyCH4III ACNGT 1 cut(s) 726
HpyCH4V TGCA 8 cut(s) 116, 161, 209, 350, 358, 567, 596, 904
HpyF10VI GCNNNNNNNGC 5 cut(s) 182, 194, 643, 652, 956
HpyF3I CTNAG 3 cut(s) 798, 809, 909
Hsp92II CATG 3 cut(s) 454, 567, 954
HspAI GCGC 1 cut(s) 89
Kzo9I GATC 4 cut(s) 4, 29, 469, 924
LguI GCTCTTC 1 cut(s) 842
LmnI GCTCC 1 cut(s) 259
Lsp1109I GCAGC 5 cut(s) 145, 197, 229, 655, 916
LweI GCATC 2 cut(s) 345, 968
MaeI CTAG 2 cut(s) 143, 527
MalI GATC 4 cut(s) 6, 31, 471, 926
MboI GATC 4 cut(s) 4, 29, 469, 924
MboII GAAGA 5 cut(s) 464, 467, 524, 859, 1013
MflI RGATCY 2 cut(s) 29, 469
MhlI GDGCHC 2 cut(s) 306, 352
MluCI AATT 4 cut(s) 400, 556, 768, 933
MlyI GAGTC 2 cut(s) 558, 751
MmeI TCCRAC 1 cut(s) 987
MnlI CCTC 6 cut(s) 187, 460, 542, 615, 858, 904
MroXI GAANNNNTTC 1 cut(s) 198
MseI TTAA 4 cut(s) 459, 855, 870, 1024
MspA1I CMGCKG 2 cut(s) 158, 242
MspI CCGG 3 cut(s) 137, 316, 437
MspR9I CCNGG 3 cut(s) 316, 317, 438
MwoI GCNNNNNNNGC 5 cut(s) 182, 194, 643, 652, 956
NciI CCSGG 3 cut(s) 316, 317, 438
NdeI CATATG 1 cut(s) 820
NdeII GATC 4 cut(s) 4, 29, 469, 924
NlaIII CATG 3 cut(s) 454, 567, 954
NspI RCATGY 2 cut(s) 454, 954
PaeI GCATGC 1 cut(s) 954
PceI AGGCCT 1 cut(s) 531
PciSI GCTCTTC 1 cut(s) 842
PdmI GAANNNNTTC 1 cut(s) 198
PflMI CCANNNNNTGG 2 cut(s) 26, 344
PkrI GCNGC 5 cut(s) 160, 187, 244, 645, 906
PleI GAGTC 2 cut(s) 557, 751
PpsI GAGTC 2 cut(s) 557, 751
Psp124BI GAGCTC 1 cut(s) 306
PspPI GGNCC 1 cut(s) 983
PsuI RGATCY 2 cut(s) 29, 469
PvuII CAGCTG 1 cut(s) 158
SacI GAGCTC 1 cut(s) 306
SapI GCTCTTC 1 cut(s) 842
SaqAI TTAA 4 cut(s) 459, 855, 870, 1024
SatI GCNGC 5 cut(s) 159, 186, 243, 644, 905
Sau3AI GATC 4 cut(s) 4, 29, 469, 924
Sau96I GGNCC 1 cut(s) 983
SchI GAGTC 2 cut(s) 558, 751
ScrFI CCNGG 3 cut(s) 316, 317, 438
SduI GDGCHC 2 cut(s) 306, 352
SfaNI GCATC 2 cut(s) 345, 968
SfcI CTRYAG 1 cut(s) 223
SmaI CCCGGG 1 cut(s) 317
SmlI CTYRAG 1 cut(s) 299
SmoI CTYRAG 1 cut(s) 299
SphI GCATGC 1 cut(s) 954
Sse9I AATT 4 cut(s) 400, 556, 768, 933
SseBI AGGCCT 1 cut(s) 531
SsiI CCGC 2 cut(s) 240, 635
SspI AATATT 1 cut(s) 76
SspMI CTAG 2 cut(s) 143, 527
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 531
StyD4I CCNGG 3 cut(s) 314, 315, 436
StyI CCWWGG 1 cut(s) 537
TaaI ACNGT 1 cut(s) 726
TaqI TCGA 1 cut(s) 49
TasI AATT 4 cut(s) 400, 556, 768, 933
Tru1I TTAA 4 cut(s) 459, 855, 870, 1024
Tru9I TTAA 4 cut(s) 459, 855, 870, 1024
TscAI CASTG 3 cut(s) 211, 598, 697
TseI GCWGC 5 cut(s) 158, 185, 242, 643, 904
TspDTI ATGAA 3 cut(s) 376, 404, 644
TspGWI ACGGA 3 cut(s) 272, 367, 693
TspMI CCCGGG 1 cut(s) 315
TspRI CASTG 3 cut(s) 211, 598, 697
Van91I CCANNNNNTGG 2 cut(s) 26, 344
VneI GTGCAC 1 cut(s) 348
XagI CCTNNNNNAGG 1 cut(s) 536
XapI RAATTY 2 cut(s) 400, 933
XceI RCATGY 2 cut(s) 454, 954
XmaI CCCGGG 1 cut(s) 315
XmnI GAANNNNTTC 1 cut(s) 198
XspI CTAG 2 cut(s) 143, 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.