source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 482, 1253 |
| AccBSI | CCGCTC | 1 cut(s) | 29 |
| AccII | CGCG | 1 cut(s) | 408 |
| AciI | CCGC | 1 cut(s) | 29 |
| AclI | AACGTT | 1 cut(s) | 1652 |
| AclWI | GGATC | 3 cut(s) | 1231, 1437, 1688 |
| AcoI | YGGCCR | 1 cut(s) | 1382 |
| AcsI | RAATTY | 6 cut(s) | 176, 887, 1030, 1138, 1257, 1704 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AfaI | GTAC | 9 cut(s) | 12, 92, 254, 405, 575, 750, 1173, 1515, 1818 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 482, 1069, 1241, 1253 |
| AflIII | ACRYGT | 2 cut(s) | 361, 1282 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1394 |
| AjiI | CACGTC | 1 cut(s) | 362 |
| AjnI | CCWGG | 1 cut(s) | 1696 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 1823 |
| AluBI | AGCT | 9 cut(s) | 242, 311, 355, 776, 956, 1186, 1343, 1379, 1487 |
| AluI | AGCT | 9 cut(s) | 242, 311, 355, 776, 956, 1186, 1343, 1379, 1487 |
| Alw21I | GWGCWC | 1 cut(s) | 1554 |
| AlwI | GGATC | 3 cut(s) | 1231, 1437, 1688 |
| AoxI | GGCC | 4 cut(s) | 453, 1244, 1268, 1382 |
| ApeKI | GCWGC | 2 cut(s) | 47, 640 |
| ApoI | RAATTY | 6 cut(s) | 176, 887, 1030, 1138, 1257, 1704 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 493, 525, 878, 910 |
| AseI | ATTAAT | 1 cut(s) | 1784 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1064 |
| AspLEI | GCGC | 1 cut(s) | 410 |
| AspS9I | GGNCC | 3 cut(s) | 733, 1244, 1268 |
| AsuHPI | GGTGA | 2 cut(s) | 409, 845 |
| AvaII | GGWCC | 1 cut(s) | 733 |
| AxyI | CCTNAGG | 1 cut(s) | 1433 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1163, 1196 |
| BalI | TGGCCA | 1 cut(s) | 1384 |
| Bbv12I | GWGCWC | 1 cut(s) | 1554 |
| BbvI | GCAGC | 2 cut(s) | 34, 652 |
| BccI | CCATC | 3 cut(s) | 388, 458, 1667 |
| BceAI | ACGGC | 1 cut(s) | 440 |
| BciT130I | CCWGG | 1 cut(s) | 1698 |
| BfaI | CTAG | 3 cut(s) | 270, 777, 1332 |
| BfmI | CTRYAG | 1 cut(s) | 1191 |
| BglII | AGATCT | 1 cut(s) | 141 |
| BisI | GCNGC | 2 cut(s) | 48, 641 |
| BlpI | GCTNAGC | 1 cut(s) | 243 |
| BlsI | GCNGC | 2 cut(s) | 49, 642 |
| BmcAI | AGTACT | 1 cut(s) | 1818 |
| Bme1390I | CCNGG | 1 cut(s) | 1698 |
| Bme18I | GGWCC | 1 cut(s) | 733 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1394 |
| BmgBI | CACGTC | 1 cut(s) | 362 |
| BmgT120I | GGNCC | 3 cut(s) | 733, 1244, 1268 |
| BmrFI | CCNGG | 1 cut(s) | 1698 |
| BmsI | GCATC | 4 cut(s) | 581, 612, 711, 1303 |
| BpmI | CTGGAG | 1 cut(s) | 687 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 243 |
| Bsa29I | ATCGAT | 1 cut(s) | 337 |
| BsaAI | YACGTR | 2 cut(s) | 1283, 1375 |
| BsaJI | CCNNGG | 3 cut(s) | 939, 1143, 1596 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 482, 1069, 1241, 1253 |
| Bse1I | ACTGG | 3 cut(s) | 164, 559, 1752 |
| Bse21I | CCTNAGG | 1 cut(s) | 1433 |
| BseBI | CCWGG | 1 cut(s) | 1698 |
| BseCI | ATCGAT | 1 cut(s) | 337 |
| BseDI | CCNNGG | 3 cut(s) | 939, 1143, 1596 |
| BseGI | GGATG | 5 cut(s) | 37, 178, 445, 1230, 1510 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 482, 1069, 1241, 1253 |
| BseMII | CTCAG | 4 cut(s) | 189, 759, 807, 1447 |
| BseNI | ACTGG | 3 cut(s) | 164, 559, 1752 |
| BseRI | GAGGAG | 2 cut(s) | 247, 674 |
| BseXI | GCAGC | 2 cut(s) | 34, 652 |
| Bsh1236I | CGCG | 1 cut(s) | 408 |
| BshFI | GGCC | 4 cut(s) | 455, 1246, 1270, 1384 |
| BshVI | ATCGAT | 1 cut(s) | 337 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1554 |
| BslFI | GGGAC | 1 cut(s) | 481 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 482, 1069, 1241, 1253 |
| BsmFI | GGGAC | 1 cut(s) | 481 |
| BsnI | GGCC | 4 cut(s) | 455, 1246, 1270, 1384 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1554 |
| Bsp143I | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 243 |
| Bsp19I | CCATGG | 3 cut(s) | 939, 1143, 1596 |
| BspACI | CCGC | 1 cut(s) | 29 |
| BspANI | GGCC | 4 cut(s) | 455, 1246, 1270, 1384 |
| BspCNI | CTCAG | 4 cut(s) | 190, 760, 808, 1446 |
| BspDI | ATCGAT | 1 cut(s) | 337 |
| BspFNI | CGCG | 1 cut(s) | 408 |
| BspPI | GGATC | 3 cut(s) | 1231, 1437, 1688 |
| BspQI | GCTCTTC | 1 cut(s) | 1323 |
| BsrBI | CCGCTC | 1 cut(s) | 29 |
| BsrI | ACTGG | 3 cut(s) | 164, 559, 1752 |
| BssECI | CCNNGG | 3 cut(s) | 939, 1143, 1596 |
| BssMI | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| BssT1I | CCWWGG | 3 cut(s) | 939, 1143, 1596 |
| Bst2UI | CCWGG | 1 cut(s) | 1698 |
| Bst4CI | ACNGT | 4 cut(s) | 753, 1179, 1513, 1615 |
| Bst6I | CTCTTC | 4 cut(s) | 35, 854, 896, 1323 |
| BstBAI | YACGTR | 2 cut(s) | 1283, 1375 |
| BstC8I | GCNNGC | 4 cut(s) | 240, 1184, 1188, 1720 |
| BstDSI | CCRYGG | 3 cut(s) | 939, 1143, 1596 |
| BstF5I | GGATG | 5 cut(s) | 37, 178, 445, 1230, 1510 |
| BstFNI | CGCG | 1 cut(s) | 408 |
| BstHHI | GCGC | 1 cut(s) | 410 |
| BstKTI | GATC | 9 cut(s) | 112, 144, 337, 341, 709, 1226, 1445, 1696, 1739 |
| BstMBI | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 244, 352 |
| BstNI | CCWGG | 1 cut(s) | 1698 |
| BstNSI | RCATGY | 2 cut(s) | 87, 1498 |
| BstSCI | CCNGG | 1 cut(s) | 1696 |
| BstSFI | CTRYAG | 1 cut(s) | 1191 |
| BstUI | CGCG | 1 cut(s) | 408 |
| BstV1I | GCAGC | 2 cut(s) | 34, 652 |
| BstX2I | RGATCY | 3 cut(s) | 141, 1442, 1693 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1718 |
| BstYI | RGATCY | 3 cut(s) | 141, 1442, 1693 |
| Bsu15I | ATCGAT | 1 cut(s) | 337 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1433 |
| BsuRI | GGCC | 4 cut(s) | 455, 1246, 1270, 1384 |
| BsuTUI | ATCGAT | 1 cut(s) | 337 |
| BtgI | CCRYGG | 3 cut(s) | 939, 1143, 1596 |
| BtrI | CACGTC | 1 cut(s) | 362 |
| BtsCI | GGATG | 5 cut(s) | 37, 178, 445, 1230, 1510 |
| BtsI | GCAGTG | 2 cut(s) | 321, 1197 |
| BtsIMutI | CAGTG | 5 cut(s) | 321, 348, 1184, 1197, 1745 |
| Cac8I | GCNNGC | 4 cut(s) | 240, 1184, 1188, 1720 |
| CfoI | GCGC | 1 cut(s) | 410 |
| Cfr13I | GGNCC | 3 cut(s) | 733, 1244, 1268 |
| ClaI | ATCGAT | 1 cut(s) | 337 |
| Csp6I | GTAC | 9 cut(s) | 11, 91, 253, 404, 574, 749, 1172, 1514, 1817 |
| CviQI | GTAC | 9 cut(s) | 11, 91, 253, 404, 574, 749, 1172, 1514, 1817 |
| DpnI | GATC | 9 cut(s) | 111, 143, 336, 340, 708, 1225, 1444, 1695, 1738 |
| DpnII | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1394 |
| EaeI | YGGCCR | 1 cut(s) | 1382 |
| Eam1104I | CTCTTC | 4 cut(s) | 35, 854, 896, 1323 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1394 |
| EarI | CTCTTC | 4 cut(s) | 35, 854, 896, 1323 |
| Eco130I | CCWWGG | 3 cut(s) | 939, 1143, 1596 |
| Eco32I | GATATC | 2 cut(s) | 1054, 1162 |
| Eco47I | GGWCC | 1 cut(s) | 733 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| Eco81I | CCTNAGG | 1 cut(s) | 1433 |
| EcoRI | GAATTC | 1 cut(s) | 1257 |
| EcoRII | CCWGG | 1 cut(s) | 1696 |
| EcoRV | GATATC | 2 cut(s) | 1054, 1162 |
| EcoT14I | CCWWGG | 3 cut(s) | 939, 1143, 1596 |
| EcoT22I | ATGCAT | 1 cut(s) | 1500 |
| ErhI | CCWWGG | 3 cut(s) | 939, 1143, 1596 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1302, 1334 |
| FaqI | GGGAC | 1 cut(s) | 481 |
| FauNDI | CATATG | 2 cut(s) | 207, 1219 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 641 |
| FokI | GGATG | 5 cut(s) | 44, 185, 452, 1217, 1517 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 641 |
| FspBI | CTAG | 3 cut(s) | 270, 777, 1332 |
| GlaI | GCGC | 1 cut(s) | 409 |
| GluI | GCNGC | 2 cut(s) | 48, 641 |
| GsuI | CTGGAG | 1 cut(s) | 687 |
| HaeIII | GGCC | 4 cut(s) | 455, 1246, 1270, 1384 |
| HhaI | GCGC | 1 cut(s) | 410 |
| Hin6I | GCGC | 1 cut(s) | 408 |
| HinP1I | GCGC | 1 cut(s) | 408 |
| HincII | GTYRAC | 4 cut(s) | 611, 699, 922, 1650 |
| HindII | GTYRAC | 4 cut(s) | 611, 699, 922, 1650 |
| HindIII | AAGCTT | 1 cut(s) | 353 |
| HinfI | GANTC | 6 cut(s) | 318, 583, 607, 1369, 1423, 1529 |
| HpaI | GTTAAC | 2 cut(s) | 699, 922 |
| HphI | GGTGA | 2 cut(s) | 409, 845 |
| Hpy166II | GTNNAC | 7 cut(s) | 611, 650, 699, 922, 1108, 1472, 1650 |
| Hpy188I | TCNGA | 4 cut(s) | 769, 1159, 1534, 1544 |
| Hpy188III | TCNNGA | 9 cut(s) | 70, 189, 270, 580, 704, 1057, 1165, 1399, 1670 |
| Hpy8I | GTNNAC | 7 cut(s) | 611, 650, 699, 922, 1108, 1472, 1650 |
| HpyAV | CCTTC | 3 cut(s) | 955, 1162, 1708 |
| HpyCH4III | ACNGT | 4 cut(s) | 753, 1179, 1513, 1615 |
| HpyCH4IV | ACGT | 5 cut(s) | 361, 479, 1282, 1374, 1652 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 244, 352 |
| HpySE526I | ACGT | 5 cut(s) | 361, 479, 1282, 1374, 1652 |
| HspAI | GCGC | 1 cut(s) | 408 |
| KspAI | GTTAAC | 2 cut(s) | 699, 922 |
| Kzo9I | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| LguI | GCTCTTC | 1 cut(s) | 1323 |
| LmnI | GCTCC | 2 cut(s) | 637, 1798 |
| Lsp1109I | GCAGC | 2 cut(s) | 34, 652 |
| LweI | GCATC | 4 cut(s) | 581, 612, 711, 1303 |
| MaeI | CTAG | 3 cut(s) | 270, 777, 1332 |
| MaeII | ACGT | 5 cut(s) | 361, 479, 1282, 1374, 1652 |
| MaeIII | GTNAC | 4 cut(s) | 445, 1082, 1370, 1507 |
| MalI | GATC | 9 cut(s) | 111, 143, 336, 340, 708, 1225, 1444, 1695, 1738 |
| MbiI | CCGCTC | 1 cut(s) | 29 |
| MboI | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| MfeI | CAATTG | 2 cut(s) | 504, 1362 |
| MflI | RGATCY | 3 cut(s) | 141, 1442, 1693 |
| MhlI | GDGCHC | 1 cut(s) | 1554 |
| MlsI | TGGCCA | 1 cut(s) | 1384 |
| MluNI | TGGCCA | 1 cut(s) | 1384 |
| MlyI | GAGTC | 3 cut(s) | 577, 616, 1378 |
| MmeI | TCCRAC | 1 cut(s) | 529 |
| MnlI | CCTC | 7 cut(s) | 177, 225, 228, 267, 536, 652, 1442 |
| Mox20I | TGGCCA | 1 cut(s) | 1384 |
| Mph1103I | ATGCAT | 1 cut(s) | 1500 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1064 |
| MscI | TGGCCA | 1 cut(s) | 1384 |
| MseI | TTAA | 8 cut(s) | 98, 125, 194, 665, 698, 921, 1305, 1784 |
| MslI | CAYNNNNRTG | 2 cut(s) | 876, 1503 |
| Msp20I | TGGCCA | 1 cut(s) | 1384 |
| MspR9I | CCNGG | 1 cut(s) | 1698 |
| MunI | CAATTG | 2 cut(s) | 504, 1362 |
| MvaI | CCWGG | 1 cut(s) | 1698 |
| MvnI | CGCG | 1 cut(s) | 408 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 244, 352 |
| NcoI | CCATGG | 3 cut(s) | 939, 1143, 1596 |
| NdeI | CATATG | 2 cut(s) | 207, 1219 |
| NdeII | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| NmuCI | GTSAC | 2 cut(s) | 1082, 1370 |
| NsiI | ATGCAT | 1 cut(s) | 1500 |
| NspI | RCATGY | 2 cut(s) | 87, 1498 |
| PciSI | GCTCTTC | 1 cut(s) | 1323 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1064 |
| PfeI | GAWTC | 3 cut(s) | 318, 1423, 1529 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 482, 1253 |
| PkrI | GCNGC | 2 cut(s) | 49, 642 |
| PleI | GAGTC | 3 cut(s) | 577, 615, 1377 |
| PpsI | GAGTC | 3 cut(s) | 577, 615, 1377 |
| Ppu21I | YACGTR | 2 cut(s) | 1283, 1375 |
| PshBI | ATTAAT | 1 cut(s) | 1784 |
| Psp1406I | AACGTT | 1 cut(s) | 1652 |
| Psp6I | CCWGG | 1 cut(s) | 1696 |
| PspGI | CCWGG | 1 cut(s) | 1696 |
| PspPI | GGNCC | 3 cut(s) | 733, 1244, 1268 |
| PsuI | RGATCY | 3 cut(s) | 141, 1442, 1693 |
| RsaI | GTAC | 9 cut(s) | 12, 92, 254, 405, 575, 750, 1173, 1515, 1818 |
| RsaNI | GTAC | 9 cut(s) | 11, 91, 253, 404, 574, 749, 1172, 1514, 1817 |
| RseI | CAYNNNNRTG | 2 cut(s) | 876, 1503 |
| SapI | GCTCTTC | 1 cut(s) | 1323 |
| SaqAI | TTAA | 8 cut(s) | 98, 125, 194, 665, 698, 921, 1305, 1784 |
| SatI | GCNGC | 2 cut(s) | 48, 641 |
| Sau3AI | GATC | 9 cut(s) | 109, 141, 334, 338, 706, 1223, 1442, 1693, 1736 |
| Sau96I | GGNCC | 3 cut(s) | 733, 1244, 1268 |
| ScaI | AGTACT | 1 cut(s) | 1818 |
| SchI | GAGTC | 3 cut(s) | 577, 616, 1378 |
| ScrFI | CCNGG | 1 cut(s) | 1698 |
| SduI | GDGCHC | 1 cut(s) | 1554 |
| SfaNI | GCATC | 4 cut(s) | 581, 612, 711, 1303 |
| SfcI | CTRYAG | 1 cut(s) | 1191 |
| SinI | GGWCC | 1 cut(s) | 733 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 876, 1503 |
| SsiI | CCGC | 1 cut(s) | 29 |
| SspI | AATATT | 2 cut(s) | 527, 990 |
| SspMI | CTAG | 3 cut(s) | 270, 777, 1332 |
| StyD4I | CCNGG | 1 cut(s) | 1696 |
| StyI | CCWWGG | 3 cut(s) | 939, 1143, 1596 |
| TaaI | ACNGT | 4 cut(s) | 753, 1179, 1513, 1615 |
| TaiI | ACGT | 5 cut(s) | 364, 482, 1285, 1377, 1655 |
| TaqI | TCGA | 6 cut(s) | 188, 230, 262, 337, 605, 1610 |
| TatI | WGTACW | 4 cut(s) | 10, 90, 573, 1816 |
| TfiI | GAWTC | 3 cut(s) | 318, 1423, 1529 |
| Tru1I | TTAA | 8 cut(s) | 98, 125, 194, 665, 698, 921, 1305, 1784 |
| Tru9I | TTAA | 8 cut(s) | 98, 125, 194, 665, 698, 921, 1305, 1784 |
| TscAI | CASTG | 5 cut(s) | 328, 348, 1184, 1204, 1752 |
| TseFI | GTSAC | 2 cut(s) | 1082, 1370 |
| TseI | GCWGC | 2 cut(s) | 47, 640 |
| Tsp45I | GTSAC | 2 cut(s) | 1082, 1370 |
| TspDTI | ATGAA | 7 cut(s) | 142, 189, 224, 234, 456, 819, 880 |
| TspGWI | ACGGA | 2 cut(s) | 1031, 1785 |
| TspRI | CASTG | 5 cut(s) | 328, 348, 1184, 1204, 1752 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 482, 1253 |
| VpaK11BI | GGWCC | 1 cut(s) | 733 |
| VspI | ATTAAT | 1 cut(s) | 1784 |
| XapI | RAATTY | 6 cut(s) | 176, 887, 1030, 1138, 1257, 1704 |
| XbaI | TCTAGA | 1 cut(s) | 269 |
| XceI | RCATGY | 2 cut(s) | 87, 1498 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1064 |
| XspI | CTAG | 3 cut(s) | 270, 777, 1332 |
| ZrmI | AGTACT | 1 cut(s) | 1818 |
| Zsp2I | ATGCAT | 1 cut(s) | 1500 |