Rorug05G0043000

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000321
Physical Location & Seq
Reverse (-)
3752515 .. 3755386
2872 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0043000.1

Sequence Viewer

Length: 1560 bp
ATGCCTGCCGTAGGTATTGCCAGTGGTGGCGAAAAGGAGTATGCCGGAAAACTCACCGGTTATGTACTGGTAACATGCATCATCGCCGCCATGGGGGGGCTGATTTTCGGCTACGACATTGGAATCTCCGGTGGTGTAACGTCCATGGACTCGTTCCTGAAGAAGTTCTTTCCTTCTGTGTACCGTAAGAAGGAGCTGGACAAGTCGACCAACCAGTACTGCCAGTATGACAGTCAGACGTTGACCATGTTCACGTCTTCGTTGTACTTGGCTGCTCTCATGGCCTCGATTGTGGCCGCCACCGTGACTCGGAAGTTTGGCCGGAAATTGTCCATGTTGTTCGGTGGTCTTCTTTTCTGCTCCGGCGCCATCATCAATGCCGCTGCCAAAGCTGTGTGGATGTTGATTCTTGGCCGGATATTGCTCGGTTTCGGTATCGGATTCTCCAATCAGTCTGTGCCACTCTACTTGTCTGAGATGGCGCCATCCAAGTTCAGAGGAGCTCTCAACATTGGTTTCCAGCTTTCTATCACAATTGGTATCCTTGCCGCCAATTTGTTGAATTACTTCTTTGCCAAGATAAAGGGCGGTTGGGGATGGCGTTTGAGTTTGGGTGGTGCAATGGTCCCTGCCCTTATCATCACCGTTGGCTCCCTAATATTACCAGACACACCAAACTCTATGATCGAGCGCGGCCAGCACGAGAAAGCCAAGACCCAACTCCGGAGAATTCGCGGTGTTGATGATGTCAGCGAGGAGTTCAATGACCTTATTGTAGCTAGTGATGAGTGTAAGAAGATAGAGGATCCATGGAGGAATCTACTTAAGAGGAAGTACAGGCCCCAACTCTGCATGGCAATTCTGATTCCATTCTTTCAGCAGCTTACCGGTATCAATGTGATCATGTTCTATGCTCCTGTGTTGTTCAACACAATTGGTTTCGGAAGTGATGCTTCTCTCATATCGGCTGTGATCACCGGAACTGTCAATGTTGCTGCAACATGTGTTTCGATGTATGGTGTTGATAAGTGGGGAAGGAGGAAGCTCTTCCTTGAGGGTGGAACTCAAATGTTGATATGCCAGATAGTTGTGGCGACTTGCATTGGTGCTAAATTTGGATTGGATGGAGATGCTGATAATTTGCCAAAGTGGTATGCAATTGTTGTGGTGATTTTCATCTGCACATATGTAGCAGGGTTTGCTTGGTCATGGGGTCCTCTAGGGTGGCTAGTCCCTAGTGAAATCTTTCCCTTGGAAATCAGATCAGCTGCTCAGAGTGTCAATGTCTCAGTCAACATGATCTTCACCTTCATTGTGGCTCAAGTCTTCTTGACAATGTTGTGCCACTTGAAATTCGGGCTCTTCATCTTCTTCGCATTCTTCGTGTGTGTCATGTCCATTTTCGTGTACTTCTTCTTGCCCGAGACAAAGGGGATCCCAATTGAAGAGATGAGCAGGGTGTGGAAGCAGCATTGGTACTGGAAGAGATTTGTTACCGATGAAGATTACCCCAATGATGGTTATGAGATGAGCAAGCCAACAACTGTCAAAACTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

519

Amino Acids

57.48

Weight (kDa)

9.01

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 26 - 488 1.1e-136 Sugar (and other) transporter
MFS_1 PF07690 76 - 438 1.3e-26 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 365, 481
AccI GTMKAC 1 cut(s) 206
AccII CGCG 2 cut(s) 693, 735
AccIII TCCGGA 1 cut(s) 723
AciI CCGC 7 cut(s) 87, 297, 381, 549, 588, 693, 735
AclWI GGATC 4 cut(s) 800, 813, 1429, 1442
AcoI YGGCCR 4 cut(s) 294, 319, 412, 694
AcsI RAATTY 3 cut(s) 729, 1112, 1352
AcuI CTGAAG 1 cut(s) 179
AcyI GRCGYC 2 cut(s) 366, 482
AfaI GTAC 7 cut(s) 66, 182, 218, 266, 836, 1409, 1478
AfiI CCNNNNNNNGG 7 cut(s) 11, 93, 96, 190, 309, 723, 1517
AflII CTTAAG 1 cut(s) 824
AflIII ACRYGT 1 cut(s) 1001
AgeI ACCGGT 2 cut(s) 56, 887
AgsI TTSAA 5 cut(s) 562, 763, 928, 1351, 1445
AjiI CACGTC 1 cut(s) 255
AluBI AGCT 8 cut(s) 196, 392, 503, 523, 779, 883, 1045, 1268
AluI AGCT 8 cut(s) 196, 392, 503, 523, 779, 883, 1045, 1268
Alw21I GWGCWC 1 cut(s) 505
Alw26I GTCTC 2 cut(s) 1291, 1418
AlwI GGATC 4 cut(s) 800, 813, 1429, 1442
Ama87I CYCGRG 1 cut(s) 1421
Aor13HI TCCGGA 1 cut(s) 723
AoxI GGCC 6 cut(s) 282, 294, 319, 412, 694, 839
ApeKI GCWGC 6 cut(s) 272, 383, 880, 995, 1268, 1468
ApoI RAATTY 3 cut(s) 729, 1112, 1352
AsiGI ACCGGT 2 cut(s) 56, 887
Asp700I GAANNNNTTC 4 cut(s) 164, 566, 1046, 1245
AspLEI GCGC 3 cut(s) 368, 484, 693
AspS9I GGNCC 3 cut(s) 625, 840, 1214
AsuHPI GGTGA 5 cut(s) 46, 634, 967, 1180, 1297
AvaI CYCGRG 1 cut(s) 1421
AvaII GGWCC 2 cut(s) 625, 1214
BamHI GGATCC 2 cut(s) 805, 1434
BanI GGYRCC 2 cut(s) 365, 481
BanII GRGCYC 2 cut(s) 505, 1362
BauI CACGAG 1 cut(s) 701
BbsI GAAGAC 3 cut(s) 249, 341, 1318
Bbv12I GWGCWC 1 cut(s) 505
BbvI GCAGC 6 cut(s) 259, 370, 892, 982, 1255, 1480
BccI CCATC 6 cut(s) 377, 472, 493, 591, 1118, 1511
BciVI GTATCC 1 cut(s) 551
BclI TGATCA 2 cut(s) 900, 972
BcoDI GTCTC 2 cut(s) 1291, 1418
BfaI CTAG 4 cut(s) 780, 1220, 1229, 1236
BfoI RGCGCY 2 cut(s) 369, 485
BfrI CTTAAG 1 cut(s) 824
BfuI GTATCC 1 cut(s) 551
BmcAI AGTACT 1 cut(s) 218
Bme18I GGWCC 2 cut(s) 625, 1214
BmeT110I CYCGRG 1 cut(s) 1421
BmgBI CACGTC 1 cut(s) 255
BmgT120I GGNCC 3 cut(s) 625, 840, 1214
BmiI GGNNCC 8 cut(s) 367, 483, 627, 652, 807, 842, 1215, 1436
BmsI GCATC 3 cut(s) 87, 940, 1120
BpiI GAAGAC 3 cut(s) 249, 341, 1318
BplI GAGNNNNNCTC 2 cut(s) 489, 521
BpuEI CTTGAG 2 cut(s) 1073, 1305
BsaBI GATNNNNATC 1 cut(s) 1175
BsaHI GRCGYC 2 cut(s) 366, 482
BsaJI CCNNGG 4 cut(s) 90, 144, 809, 1251
BsaWI WCCGGW 5 cut(s) 56, 128, 723, 887, 977
Bsc4I CCNNNNNNNGG 7 cut(s) 11, 93, 96, 190, 309, 723, 1517
Bse118I RCCGGY 2 cut(s) 56, 887
Bse1I ACTGG 5 cut(s) 21, 72, 214, 223, 1484
Bse3DI GCAATG 1 cut(s) 627
Bse8I GATNNNNATC 1 cut(s) 1175
BseAI TCCGGA 1 cut(s) 723
BseDI CCNNGG 4 cut(s) 90, 144, 809, 1251
BseGI GGATG 4 cut(s) 405, 485, 602, 1129
BseJI GATNNNNATC 1 cut(s) 1175
BseLI CCNNNNNNNGG 7 cut(s) 11, 93, 96, 190, 309, 723, 1517
BseMI GCAATG 1 cut(s) 627
BseMII CTCAG 3 cut(s) 465, 1286, 1302
BseNI ACTGG 5 cut(s) 21, 72, 214, 223, 1484
BseRI GAGGAG 2 cut(s) 513, 770
BseXI GCAGC 6 cut(s) 259, 370, 892, 982, 1255, 1480
BsgI GTGCAG 1 cut(s) 1165
Bsh1236I CGCG 2 cut(s) 693, 735
BshFI GGCC 6 cut(s) 284, 296, 321, 414, 696, 841
BshNI GGYRCC 2 cut(s) 365, 481
BshTI ACCGGT 2 cut(s) 56, 887
BsiHKAI GWGCWC 1 cut(s) 505
BsiHKCI CYCGRG 1 cut(s) 1421
BsiSI CCGG 9 cut(s) 45, 57, 129, 322, 363, 415, 724, 888, 978
BslFI GGGAC 2 cut(s) 611, 1217
BslI CCNNNNNNNGG 7 cut(s) 11, 93, 96, 190, 309, 723, 1517
BsmAI GTCTC 2 cut(s) 1291, 1418
BsmFI GGGAC 2 cut(s) 611, 1217
BsmI GAATGC 1 cut(s) 1376
BsnI GGCC 6 cut(s) 284, 296, 321, 414, 696, 841
BsoBI CYCGRG 1 cut(s) 1421
Bsp1286I GDGCHC 2 cut(s) 505, 1362
Bsp13I TCCGGA 1 cut(s) 723
Bsp143I GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
Bsp19I CCATGG 3 cut(s) 90, 144, 809
BspACI CCGC 7 cut(s) 87, 297, 381, 549, 588, 693, 735
BspANI GGCC 6 cut(s) 284, 296, 321, 414, 696, 841
BspCNI CTCAG 3 cut(s) 466, 1285, 1301
BspEI TCCGGA 1 cut(s) 723
BspFNI CGCG 2 cut(s) 693, 735
BspLI GGNNCC 8 cut(s) 367, 483, 627, 652, 807, 842, 1215, 1436
BspPI GGATC 4 cut(s) 800, 813, 1429, 1442
BspQI GCTCTTC 2 cut(s) 1052, 1367
BspT107I GGYRCC 2 cut(s) 365, 481
BspTI CTTAAG 1 cut(s) 824
BsrDI GCAATG 1 cut(s) 627
BsrFI RCCGGY 2 cut(s) 56, 887
BsrI ACTGG 5 cut(s) 21, 72, 214, 223, 1484
BssAI RCCGGY 2 cut(s) 56, 887
BssECI CCNNGG 4 cut(s) 90, 144, 809, 1251
BssMI GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
BssNI GRCGYC 2 cut(s) 366, 482
BssSI CACGAG 1 cut(s) 701
BssT1I CCWWGG 4 cut(s) 90, 144, 809, 1251
Bst2BI CACGAG 1 cut(s) 701
Bst4CI ACNGT 7 cut(s) 185, 233, 304, 646, 985, 1546, 1555
Bst6I CTCTTC 4 cut(s) 1052, 1367, 1440, 1478
BstACI GRCGYC 2 cut(s) 366, 482
BstAFI CTTAAG 1 cut(s) 824
BstAPI GCANNNNNTGC 1 cut(s) 1199
BstC8I GCNNGC 3 cut(s) 6, 698, 1535
BstDEI CTNAG 3 cut(s) 474, 1272, 1288
BstDSI CCRYGG 3 cut(s) 90, 144, 809
BstENI CCTNNNNNAGG 1 cut(s) 9
BstF5I GGATG 4 cut(s) 405, 485, 602, 1129
BstFNI CGCG 2 cut(s) 693, 735
BstH2I RGCGCY 2 cut(s) 369, 485
BstHHI GCGC 3 cut(s) 368, 484, 693
BstKTI GATC 7 cut(s) 687, 808, 903, 975, 1265, 1302, 1437
BstMAI GTCTC 2 cut(s) 1291, 1418
BstMBI GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
BstMWI GCNNNNNNNGC 4 cut(s) 281, 389, 697, 1199
BstNSI RCATGY 2 cut(s) 78, 1005
BstUI CGCG 2 cut(s) 693, 735
BstV1I GCAGC 6 cut(s) 259, 370, 892, 982, 1255, 1480
BstV2I GAAGAC 3 cut(s) 249, 341, 1318
BstX2I RGATCY 2 cut(s) 805, 1434
BstYI RGATCY 2 cut(s) 805, 1434
BsuI GTATCC 1 cut(s) 551
BsuRI GGCC 6 cut(s) 284, 296, 321, 414, 696, 841
BtgI CCRYGG 3 cut(s) 90, 144, 809
BtgZI GCGATG 1 cut(s) 67
BtrI CACGTC 1 cut(s) 255
BtsCI GGATG 4 cut(s) 405, 485, 602, 1129
BtsIMutI CAGTG 1 cut(s) 28
Cac8I GCNNGC 3 cut(s) 6, 698, 1535
CfoI GCGC 3 cut(s) 368, 484, 693
Cfr10I RCCGGY 2 cut(s) 56, 887
Cfr13I GGNCC 3 cut(s) 625, 840, 1214
Csp6I GTAC 7 cut(s) 65, 181, 217, 265, 835, 1408, 1477
CspAI ACCGGT 2 cut(s) 56, 887
CspCI CAANNNNNGTGG 4 cut(s) 450, 485, 1146, 1181
CviQI GTAC 7 cut(s) 65, 181, 217, 265, 835, 1408, 1477
DdeI CTNAG 3 cut(s) 474, 1272, 1288
DinI GGCGCC 2 cut(s) 367, 483
DpnI GATC 7 cut(s) 686, 807, 902, 974, 1264, 1301, 1436
DpnII GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
EaeI YGGCCR 4 cut(s) 294, 319, 412, 694
Eam1104I CTCTTC 4 cut(s) 1052, 1367, 1440, 1478
EarI CTCTTC 4 cut(s) 1052, 1367, 1440, 1478
Ecl136II GAGCTC 1 cut(s) 503
Eco130I CCWWGG 4 cut(s) 90, 144, 809, 1251
Eco24I GRGCYC 2 cut(s) 505, 1362
Eco47I GGWCC 2 cut(s) 625, 1214
Eco53kI GAGCTC 1 cut(s) 503
Eco57I CTGAAG 1 cut(s) 179
Eco88I CYCGRG 1 cut(s) 1421
EcoICRI GAGCTC 1 cut(s) 503
EcoNI CCTNNNNNAGG 1 cut(s) 9
EcoO109I RGGNCCY 2 cut(s) 840, 1214
EcoRI GAATTC 1 cut(s) 729
EcoT14I CCWWGG 4 cut(s) 90, 144, 809, 1251
EcoT22I ATGCAT 1 cut(s) 80
EcoT38I GRGCYC 2 cut(s) 505, 1362
EgeI GGCGCC 2 cut(s) 367, 483
EheI GGCGCC 2 cut(s) 367, 483
ErhI CCWWGG 4 cut(s) 90, 144, 809, 1251
FalI AAGNNNNNCTT 4 cut(s) 152, 184, 937, 969
FaqI GGGAC 2 cut(s) 611, 1217
FauNDI CATATG 1 cut(s) 1186
FbaI TGATCA 2 cut(s) 900, 972
FblI GTMKAC 1 cut(s) 206
FokI GGATG 4 cut(s) 412, 472, 609, 1136
FriOI GRGCYC 2 cut(s) 505, 1362
FspBI CTAG 4 cut(s) 780, 1220, 1229, 1236
GlaI GCGC 3 cut(s) 367, 483, 692
HaeII RGCGCY 2 cut(s) 369, 485
HaeIII GGCC 6 cut(s) 284, 296, 321, 414, 696, 841
HapII CCGG 9 cut(s) 45, 57, 129, 322, 363, 415, 724, 888, 978
HhaI GCGC 3 cut(s) 368, 484, 693
Hin1I GRCGYC 2 cut(s) 366, 482
Hin6I GCGC 3 cut(s) 366, 482, 691
HinP1I GCGC 3 cut(s) 366, 482, 691
HincII GTYRAC 3 cut(s) 207, 243, 1294
HindII GTYRAC 3 cut(s) 207, 243, 1294
HinfI GANTC 7 cut(s) 123, 149, 307, 406, 441, 817, 865
HpaII CCGG 9 cut(s) 45, 57, 129, 322, 363, 415, 724, 888, 978
HphI GGTGA 5 cut(s) 46, 634, 967, 1180, 1297
Hpy166II GTNNAC 6 cut(s) 181, 207, 243, 252, 1294, 1408
Hpy188I TCNGA 9 cut(s) 237, 312, 440, 475, 497, 864, 944, 1262, 1275
Hpy188III TCNNGA 3 cut(s) 157, 724, 1330
Hpy8I GTNNAC 6 cut(s) 181, 207, 243, 252, 1294, 1408
HpyAV CCTTC 4 cut(s) 183, 184, 1029, 1318
HpyCH4III ACNGT 7 cut(s) 185, 233, 304, 646, 985, 1546, 1555
HpyCH4IV ACGT 3 cut(s) 140, 239, 254
HpyCH4V TGCA 7 cut(s) 78, 620, 852, 998, 1101, 1157, 1182
HpyF10VI GCNNNNNNNGC 4 cut(s) 281, 389, 697, 1199
HpyF3I CTNAG 3 cut(s) 474, 1272, 1288
HpySE526I ACGT 3 cut(s) 140, 239, 254
Hsp92I GRCGYC 2 cut(s) 366, 482
HspAI GCGC 3 cut(s) 366, 482, 691
KasI GGCGCC 2 cut(s) 365, 481
Kpn2I TCCGGA 1 cut(s) 723
Ksp22I TGATCA 2 cut(s) 900, 972
Kzo9I GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
LguI GCTCTTC 2 cut(s) 1052, 1367
LmnI GCTCC 5 cut(s) 193, 365, 500, 656, 919
Lsp1109I GCAGC 6 cut(s) 259, 370, 892, 982, 1255, 1480
LweI GCATC 3 cut(s) 87, 940, 1120
MaeI CTAG 4 cut(s) 780, 1220, 1229, 1236
MaeII ACGT 3 cut(s) 140, 239, 254
MaeIII GTNAC 4 cut(s) 70, 136, 304, 1492
MalI GATC 7 cut(s) 686, 807, 902, 974, 1264, 1301, 1436
MboI GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
MfeI CAATTG 4 cut(s) 534, 933, 1158, 1440
MflI RGATCY 2 cut(s) 805, 1434
MhlI GDGCHC 2 cut(s) 505, 1362
Mly113I GGCGCC 2 cut(s) 366, 482
MlyI GAGTC 2 cut(s) 143, 301
MnlI CCTC 9 cut(s) 295, 491, 748, 796, 807, 822, 1032, 1048, 1227
Mph1103I ATGCAT 1 cut(s) 80
MroI TCCGGA 1 cut(s) 723
MroXI GAANNNNTTC 4 cut(s) 164, 566, 1046, 1245
MseI TTAA 1 cut(s) 825
MslI CAYNNNNRTG 1 cut(s) 1403
MspA1I CMGCKG 2 cut(s) 383, 1268
MspCI CTTAAG 1 cut(s) 824
MspI CCGG 9 cut(s) 45, 57, 129, 322, 363, 415, 724, 888, 978
MunI CAATTG 4 cut(s) 534, 933, 1158, 1440
Mva1269I GAATGC 1 cut(s) 1376
MvnI CGCG 2 cut(s) 693, 735
MwoI GCNNNNNNNGC 4 cut(s) 281, 389, 697, 1199
NarI GGCGCC 2 cut(s) 366, 482
NcoI CCATGG 3 cut(s) 90, 144, 809
NdeI CATATG 1 cut(s) 1186
NdeII GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
NlaIV GGNNCC 8 cut(s) 367, 483, 627, 652, 807, 842, 1215, 1436
NmuCI GTSAC 1 cut(s) 304
NsiI ATGCAT 1 cut(s) 80
NspI RCATGY 2 cut(s) 78, 1005
PciI ACATGT 1 cut(s) 1001
PciSI GCTCTTC 2 cut(s) 1052, 1367
PcsI WCGNNNNNNNCGW 1 cut(s) 1380
PctI GAATGC 1 cut(s) 1376
PdmI GAANNNNTTC 4 cut(s) 164, 566, 1046, 1245
PfeI GAWTC 5 cut(s) 123, 406, 441, 817, 865
PinAI ACCGGT 2 cut(s) 56, 887
PleI GAGTC 2 cut(s) 143, 301
PluTI GGCGCC 2 cut(s) 369, 485
PpsI GAGTC 2 cut(s) 143, 301
PpuMI RGGWCCY 1 cut(s) 1214
PscI ACATGT 1 cut(s) 1001
Psp124BI GAGCTC 1 cut(s) 505
Psp5II RGGWCCY 1 cut(s) 1214
PspN4I GGNNCC 8 cut(s) 367, 483, 627, 652, 807, 842, 1215, 1436
PspPI GGNCC 3 cut(s) 625, 840, 1214
PspPPI RGGWCCY 1 cut(s) 1214
PsuI RGATCY 2 cut(s) 805, 1434
PvuII CAGCTG 1 cut(s) 1268
RsaI GTAC 7 cut(s) 66, 182, 218, 266, 836, 1409, 1478
RsaNI GTAC 7 cut(s) 65, 181, 217, 265, 835, 1408, 1477
RseI CAYNNNNRTG 1 cut(s) 1403
SacI GAGCTC 1 cut(s) 505
SalI GTCGAC 1 cut(s) 205
SapI GCTCTTC 2 cut(s) 1052, 1367
SaqAI TTAA 1 cut(s) 825
Sau3AI GATC 7 cut(s) 684, 805, 900, 972, 1262, 1299, 1434
Sau96I GGNCC 3 cut(s) 625, 840, 1214
ScaI AGTACT 1 cut(s) 218
SchI GAGTC 2 cut(s) 143, 301
SduI GDGCHC 2 cut(s) 505, 1362
SfaNI GCATC 3 cut(s) 87, 940, 1120
SfoI GGCGCC 2 cut(s) 367, 483
SinI GGWCC 2 cut(s) 625, 1214
SmiMI CAYNNNNRTG 1 cut(s) 1403
SmlI CTYRAG 3 cut(s) 824, 1052, 1320
SmoI CTYRAG 3 cut(s) 824, 1052, 1320
SsiI CCGC 7 cut(s) 87, 297, 381, 549, 588, 693, 735
SspDI GGCGCC 2 cut(s) 365, 481
SspI AATATT 1 cut(s) 660
SspMI CTAG 4 cut(s) 780, 1220, 1229, 1236
SstI GAGCTC 1 cut(s) 505
StyI CCWWGG 4 cut(s) 90, 144, 809, 1251
TaaI ACNGT 7 cut(s) 185, 233, 304, 646, 985, 1546, 1555
TaiI ACGT 3 cut(s) 143, 242, 257
TaqI TCGA 4 cut(s) 206, 287, 687, 1010
TatI WGTACW 5 cut(s) 64, 216, 264, 834, 1407
TauI GCSGC 5 cut(s) 89, 299, 383, 551, 696
TfiI GAWTC 5 cut(s) 123, 406, 441, 817, 865
Tru1I TTAA 1 cut(s) 825
Tru9I TTAA 1 cut(s) 825
TscAI CASTG 1 cut(s) 28
TseFI GTSAC 1 cut(s) 304
TseI GCWGC 6 cut(s) 272, 383, 880, 995, 1268, 1468
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 4 cut(s) 1165, 1300, 1354, 1515
TspRI CASTG 1 cut(s) 28
Vha464I CTTAAG 1 cut(s) 824
VpaK11BI GGWCC 2 cut(s) 625, 1214
XagI CCTNNNNNAGG 1 cut(s) 9
XapI RAATTY 3 cut(s) 729, 1112, 1352
XceI RCATGY 2 cut(s) 78, 1005
XmiI GTMKAC 1 cut(s) 206
XmnI GAANNNNTTC 4 cut(s) 164, 566, 1046, 1245
XspI CTAG 4 cut(s) 780, 1220, 1229, 1236
ZrmI AGTACT 1 cut(s) 218
Zsp2I ATGCAT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.