Rh7DG364700

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000321
Physical Location & Seq
Forward (+)
48743559 .. 48751961
8403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG364700.1

Sequence Viewer

Length: 1716 bp
ATGAAACACTTCAAAGACAATCCTTTAGAAGACGATGATGAATATATAGATGAGGATGCAGATGACCAGGCCACAAACAAGAGGAAAGGGAGAGGTCCAACTTTGATGTCAGACTTGGTCCATCGTAGGGGCCGTAAGGGTCGTATAGAAGTTGGATATAACACAAAGAGACAGCCAGAAGGCAAGCATGGATCAAATTTAGCTAGTTTCATTGGAGTAATGGCGCGAAGCACTGTTCCAATTATATATGAGGATTGGAAAGCGGTACCAGCTTCTTTAAAGGATAAGATATGGGACATGGTTCTGAAAGCATTCATCGTGGATATGAATAGTAGGAAGCATGTCATAAGCAGTGCTGGAAAGGCATGGAAATCATTCAAGAGCACTTTAACAACATCATATATATTGAAATTCAAACATCAGCCTCTGAAGCTAAAGACTCCACCGTCTGGCTATGATTTCATCCTTCAAGCACATTGGGATGCCTTTGTGATGTCTCGATTAACAGAAGAATTTGCGGAAATTAGAGAAGCTGCATCAAGGAGGCGAGCTCTCCATGTATACAATCATCGAATGTCTAGAAAAGGCTATGCCAATTTGGAAGAAGAATTAAAATTGGCTTTGGGTGACCAAACTGATATTGATCGATCAGTTCTGTGGAAGAAAGCACGTGTTGATAAAAATGGAAACTATTCAAATGAGGCAGTGAAACAACGTGTTGATAAAATTGATGAAGTGACTAAACATGTTAAGGATGGTATTATATCAACAGCTGGTAGTAATGACATACTGACAATGGCTTTGGAAAAGCCTGAATATTCCGGTCGTGTAAGAGGTGTTGGAAGCAATGTCACACCTATTTTGTACTTCAATACTCCAAGGTGTCGATCTCAATCCACCCAAAATCAGTTGTTGCAACAAATGGAGCAAATGCAGAACCAGCTTTTAATGTTTACTCAATTGCTACAACCTGATCAATTGTTAATGATGCAACACATGGTCCAAGGTAGTCGTGTGTCTGAGAAATCTAGTTGCTCAGTTCAGAAGGACAAAGATGAGACATTATCTAAGGAGGAGGAGTCTAGGGTGGAAATGATGAAACAAAAAGAGAAGAAGTCTAAGAAAGCTACATTTAAAGTCAATGTACAAGAGGCTTTGAAGACTAGTACTAAAATTCCAGAACAAATCGAGCAGGTAAAACAACACAATAAAGAAGAATCAGCTCTGAAACCTGGAAAAAACAAACAAGATGGCTATACAGAGGTTCCCAAAGACAAGCCACAACATATTGAAAAGCCCAAGCTAAAGACTCCAAATGCATCATTTAAACCCATGTTGCCACAAAACTTGTACAAGATGCCTCTATCTGTACGATTTCTATTGCGATTTGCTAGGACAATGCGAGAAGAAAAACCATTGAAGGTGGCCATTGATTCTGGTGTCTTTGGATATGAACAAGAAACTTACCTTAACAAAGATGACATCATTGAATTTTGTTCAATGGAACCACTCTCTACTGTTTGCATGACAATCTACATGAGACATCTATGGTCATCATTAAAGAAAGATCATAAGGATAACTTGTATGGATTTGCGGATCCATCTTCCTTCTCTCATGATTCTGGAAAACGAGATGAAAGATCGTTTGCGCTGTCAGTAAGATTAGAGAAAAGCAAGGAACAACAATTGATTTTTGCTCCTTACAATTTTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

571

Amino Acids

65.8

Weight (kDa)

9.37

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 157 - 286 3.8e-13 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 445
Acc36I ACCTGC 1 cut(s) 1183
Acc65I GGTACC 1 cut(s) 265
AccB1I GGYRCC 1 cut(s) 265
AccB7I CCANNNNNTGG 1 cut(s) 449
AccI GTMKAC 1 cut(s) 561
AccII CGCG 1 cut(s) 226
AciI CCGC 3 cut(s) 263, 518, 1595
AclWI GGATC 3 cut(s) 199, 1592, 1605
AcoI YGGCCR 1 cut(s) 1425
AcsI RAATTY 5 cut(s) 196, 410, 512, 1173, 1490
AcuI CTGAAG 1 cut(s) 449
AcvI CACGTG 1 cut(s) 671
AfaI GTAC 6 cut(s) 267, 866, 1146, 1168, 1352, 1371
AfiI CCNNNNNNNGG 2 cut(s) 127, 449
AflIII ACRYGT 3 cut(s) 670, 715, 745
AhlI ACTAGT 1 cut(s) 1163
AjnI CCWGG 2 cut(s) 66, 1231
Alw21I GWGCWC 2 cut(s) 386, 553
Alw26I GTCTC 4 cut(s) 163, 501, 1052, 1534
AlwI GGATC 3 cut(s) 199, 1592, 1605
AlwNI CAGNNNCTG 1 cut(s) 427
AoxI GGCC 3 cut(s) 69, 130, 1425
ApeKI GCWGC 1 cut(s) 533
ApoI RAATTY 5 cut(s) 196, 410, 512, 1173, 1490
ArsI GACNNNNNNTTYG 2 cut(s) 784, 816
Asp700I GAANNNNTTC 4 cut(s) 8, 311, 374, 691
Asp718I GGTACC 1 cut(s) 265
AspLEI GCGC 2 cut(s) 226, 1651
AspS9I GGNCC 4 cut(s) 95, 118, 130, 1000
AsuHPI GGTGA 1 cut(s) 638
AvaII GGWCC 3 cut(s) 95, 118, 1000
BalI TGGCCA 1 cut(s) 1427
BamHI GGATCC 1 cut(s) 1597
BanI GGYRCC 1 cut(s) 265
BanII GRGCYC 1 cut(s) 553
BbrPI CACGTG 1 cut(s) 671
BbsI GAAGAC 2 cut(s) 36, 1166
Bbv12I GWGCWC 2 cut(s) 386, 553
BbvI GCAGC 1 cut(s) 520
BccI CCATC 4 cut(s) 129, 749, 1244, 1609
BceAI ACGGC 1 cut(s) 117
BciT130I CCWGG 2 cut(s) 68, 1233
BclI TGATCA 1 cut(s) 973
BcoDI GTCTC 4 cut(s) 163, 501, 1052, 1534
BcuI ACTAGT 1 cut(s) 1163
BfaI CTAG 6 cut(s) 204, 579, 1029, 1083, 1164, 1392
BfuAI ACCTGC 1 cut(s) 1183
BisI GCNGC 1 cut(s) 534
BlsI GCNGC 1 cut(s) 535
BmcAI AGTACT 1 cut(s) 1168
Bme1390I CCNGG 2 cut(s) 68, 1233
Bme18I GGWCC 3 cut(s) 95, 118, 1000
BmgT120I GGNCC 4 cut(s) 95, 118, 130, 1000
BmiI GGNNCC 5 cut(s) 131, 267, 1266, 1506, 1599
BmrFI CCNGG 2 cut(s) 68, 1233
BmsI GCATC 6 cut(s) 46, 472, 545, 978, 1328, 1347
BpiI GAAGAC 2 cut(s) 36, 1166
BplI GAGNNNNNCTC 2 cut(s) 535, 567
Bsa29I ATCGAT 1 cut(s) 646
BsaAI YACGTR 1 cut(s) 671
BsaBI GATNNNNATC 2 cut(s) 642, 892
BsaJI CCNNGG 2 cut(s) 878, 1003
BsaWI WCCGGW 1 cut(s) 821
BsaXI ACNNNNNCTCC 2 cut(s) 1064, 1094
Bsc4I CCNNNNNNNGG 2 cut(s) 127, 449
Bse3DI GCAATG 1 cut(s) 853
Bse8I GATNNNNATC 2 cut(s) 642, 892
BseBI CCWGG 2 cut(s) 68, 1233
BseCI ATCGAT 1 cut(s) 646
BseDI CCNNGG 2 cut(s) 878, 1003
BseGI GGATG 4 cut(s) 61, 462, 487, 760
BseJI GATNNNNATC 2 cut(s) 642, 892
BseLI CCNNNNNNNGG 2 cut(s) 127, 449
BseMI GCAATG 1 cut(s) 853
BseMII CTCAG 2 cut(s) 1011, 1050
BseRI GAGGAG 2 cut(s) 1088, 1091
BseXI GCAGC 1 cut(s) 520
Bsh1236I CGCG 1 cut(s) 226
Bsh1285I CGRYCG 1 cut(s) 826
BshFI GGCC 3 cut(s) 71, 132, 1427
BshNI GGYRCC 1 cut(s) 265
BshVI ATCGAT 1 cut(s) 646
BsiEI CGRYCG 1 cut(s) 826
BsiHKAI GWGCWC 2 cut(s) 386, 553
BsiSI CCGG 1 cut(s) 822
BslFI GGGAC 1 cut(s) 308
BslI CCNNNNNNNGG 2 cut(s) 127, 449
BsmAI GTCTC 4 cut(s) 163, 501, 1052, 1534
BsmFI GGGAC 1 cut(s) 308
BsmI GAATGC 1 cut(s) 311
BsnI GGCC 3 cut(s) 71, 132, 1427
Bsp1286I GDGCHC 2 cut(s) 386, 553
Bsp1407I TGTACA 2 cut(s) 1144, 1350
Bsp143I GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
BspACI CCGC 3 cut(s) 263, 518, 1595
BspANI GGCC 3 cut(s) 71, 132, 1427
BspCNI CTCAG 2 cut(s) 1012, 1049
BspDI ATCGAT 1 cut(s) 646
BspFNI CGCG 1 cut(s) 226
BspHI TCATGA 1 cut(s) 1615
BspLI GGNNCC 5 cut(s) 131, 267, 1266, 1506, 1599
BspMI ACCTGC 1 cut(s) 1183
BspPI GGATC 3 cut(s) 199, 1592, 1605
BspT107I GGYRCC 1 cut(s) 265
BsrDI GCAATG 1 cut(s) 853
BsrGI TGTACA 2 cut(s) 1144, 1350
BssECI CCNNGG 2 cut(s) 878, 1003
BssMI GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
BssNAI GTATAC 1 cut(s) 562
BssT1I CCWWGG 2 cut(s) 878, 1003
Bst1107I GTATAC 1 cut(s) 562
Bst2UI CCWGG 2 cut(s) 68, 1233
Bst4CI ACNGT 3 cut(s) 235, 447, 1519
BstAUI TGTACA 2 cut(s) 1144, 1350
BstBAI YACGTR 1 cut(s) 671
BstC8I GCNNGC 2 cut(s) 185, 549
BstDEI CTNAG 4 cut(s) 1020, 1036, 1068, 1119
BstEII GGTNACC 1 cut(s) 626
BstF5I GGATG 4 cut(s) 61, 462, 487, 760
BstFNI CGCG 1 cut(s) 226
BstHHI GCGC 2 cut(s) 226, 1651
BstKTI GATC 8 cut(s) 194, 646, 650, 890, 976, 1570, 1600, 1643
BstMAI GTCTC 4 cut(s) 163, 501, 1052, 1534
BstMBI GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
BstMCI CGRYCG 1 cut(s) 826
BstMWI GCNNNNNNNGC 4 cut(s) 269, 362, 430, 940
BstNI CCWGG 2 cut(s) 68, 1233
BstNSI RCATGY 2 cut(s) 344, 749
BstPI GGTNACC 1 cut(s) 626
BstSCI CCNGG 2 cut(s) 66, 1231
BstUI CGCG 1 cut(s) 226
BstV1I GCAGC 1 cut(s) 520
BstV2I GAAGAC 2 cut(s) 36, 1166
BstX2I RGATCY 1 cut(s) 1597
BstYI RGATCY 1 cut(s) 1597
BstZ17I GTATAC 1 cut(s) 562
Bsu15I ATCGAT 1 cut(s) 646
BsuRI GGCC 3 cut(s) 71, 132, 1427
BsuTUI ATCGAT 1 cut(s) 646
BtsCI GGATG 4 cut(s) 61, 462, 487, 760
BtsI GCAGTG 2 cut(s) 358, 711
BtsIMutI CAGTG 3 cut(s) 231, 358, 711
BveI ACCTGC 1 cut(s) 1183
Cac8I GCNNGC 2 cut(s) 185, 549
CaiI CAGNNNCTG 1 cut(s) 427
CciI TCATGA 1 cut(s) 1615
CfoI GCGC 2 cut(s) 226, 1651
Cfr13I GGNCC 4 cut(s) 95, 118, 130, 1000
ClaI ATCGAT 1 cut(s) 646
Csp6I GTAC 6 cut(s) 266, 865, 1145, 1167, 1351, 1370
CspCI CAANNNNNGTGG 2 cut(s) 1329, 1364
CviQI GTAC 6 cut(s) 266, 865, 1145, 1167, 1351, 1370
DdeI CTNAG 4 cut(s) 1020, 1036, 1068, 1119
DpnI GATC 8 cut(s) 193, 645, 649, 889, 975, 1569, 1599, 1642
DpnII GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
DraI TTTAAA 3 cut(s) 279, 1135, 1327
DrdI GACNNNNNNGTC 1 cut(s) 445
DseDI GACNNNNNNGTC 1 cut(s) 445
EaeI YGGCCR 1 cut(s) 1425
Ecl136II GAGCTC 1 cut(s) 551
Eco130I CCWWGG 2 cut(s) 878, 1003
Eco24I GRGCYC 1 cut(s) 553
Eco47I GGWCC 3 cut(s) 95, 118, 1000
Eco53kI GAGCTC 1 cut(s) 551
Eco57I CTGAAG 1 cut(s) 449
Eco72I CACGTG 1 cut(s) 671
Eco91I GGTNACC 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 551
EcoO65I GGTNACC 1 cut(s) 626
EcoRII CCWGG 2 cut(s) 66, 1231
EcoT14I CCWWGG 2 cut(s) 878, 1003
EcoT22I ATGCAT 1 cut(s) 1321
EcoT38I GRGCYC 1 cut(s) 553
ErhI CCWWGG 2 cut(s) 878, 1003
FalI AAGNNNNNCTT 2 cut(s) 1565, 1597
FaqI GGGAC 1 cut(s) 308
FbaI TGATCA 1 cut(s) 973
FblI GTMKAC 1 cut(s) 561
Fnu4HI GCNGC 1 cut(s) 534
FokI GGATG 4 cut(s) 68, 449, 494, 767
FriOI GRGCYC 1 cut(s) 553
Fsp4HI GCNGC 1 cut(s) 534
FspBI CTAG 6 cut(s) 204, 579, 1029, 1083, 1164, 1392
GlaI GCGC 2 cut(s) 225, 1650
GluI GCNGC 1 cut(s) 534
HaeIII GGCC 3 cut(s) 71, 132, 1427
HapII CCGG 1 cut(s) 822
HhaI GCGC 2 cut(s) 226, 1651
Hin6I GCGC 2 cut(s) 224, 1649
HinP1I GCGC 2 cut(s) 224, 1649
HinfI GANTC 6 cut(s) 439, 1079, 1217, 1309, 1433, 1619
HpaII CCGG 1 cut(s) 822
HphI GGTGA 1 cut(s) 638
Hpy166II GTNNAC 2 cut(s) 562, 954
Hpy188I TCNGA 6 cut(s) 112, 306, 429, 1021, 1044, 1227
Hpy188III TCNNGA 6 cut(s) 379, 498, 579, 1178, 1616, 1623
Hpy8I GTNNAC 2 cut(s) 562, 954
HpyAV CCTTC 5 cut(s) 173, 476, 1039, 1414, 1618
HpyCH4III ACNGT 3 cut(s) 235, 447, 1519
HpyCH4IV ACGT 2 cut(s) 670, 715
HpyCH4V TGCA 7 cut(s) 59, 536, 916, 934, 991, 1319, 1524
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 362, 430, 940
HpyF3I CTNAG 4 cut(s) 1020, 1036, 1068, 1119
HpySE526I ACGT 2 cut(s) 670, 715
HspAI GCGC 2 cut(s) 224, 1649
KpnI GGTACC 1 cut(s) 269
Ksp22I TGATCA 1 cut(s) 973
Kzo9I GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
LmnI GCTCC 2 cut(s) 925, 1702
Lsp1109I GCAGC 1 cut(s) 520
LweI GCATC 6 cut(s) 46, 472, 545, 978, 1328, 1347
MaeI CTAG 6 cut(s) 204, 579, 1029, 1083, 1164, 1392
MaeII ACGT 2 cut(s) 670, 715
MaeIII GTNAC 3 cut(s) 626, 736, 850
MalI GATC 8 cut(s) 193, 645, 649, 889, 975, 1569, 1599, 1642
MboI GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
MfeI CAATTG 3 cut(s) 959, 977, 1685
MflI RGATCY 1 cut(s) 1597
MhlI GDGCHC 2 cut(s) 386, 553
MlsI TGGCCA 1 cut(s) 1427
MluNI TGGCCA 1 cut(s) 1427
MlyI GAGTC 3 cut(s) 433, 1088, 1303
MmeI TCCRAC 3 cut(s) 122, 133, 820
Mox20I TGGCCA 1 cut(s) 1427
Mph1103I ATGCAT 1 cut(s) 1321
MroXI GAANNNNTTC 4 cut(s) 8, 311, 374, 691
MscI TGGCCA 1 cut(s) 1427
MslI CAYNNNNRTG 1 cut(s) 480
Msp20I TGGCCA 1 cut(s) 1427
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 1 cut(s) 822
MspR9I CCNGG 2 cut(s) 68, 1233
MunI CAATTG 3 cut(s) 959, 977, 1685
Mva1269I GAATGC 1 cut(s) 311
MvaI CCWGG 2 cut(s) 68, 1233
MvnI CGCG 1 cut(s) 226
MwoI GCNNNNNNNGC 4 cut(s) 269, 362, 430, 940
NdeII GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
NlaIV GGNNCC 5 cut(s) 131, 267, 1266, 1506, 1599
NmuCI GTSAC 3 cut(s) 626, 736, 850
NsiI ATGCAT 1 cut(s) 1321
NspI RCATGY 2 cut(s) 344, 749
PagI TCATGA 1 cut(s) 1615
PciI ACATGT 1 cut(s) 745
PcsI WCGNNNNNNNCGW 1 cut(s) 130
PctI GAATGC 1 cut(s) 311
PdmI GAANNNNTTC 4 cut(s) 8, 311, 374, 691
PfeI GAWTC 3 cut(s) 1217, 1433, 1619
PflFI GACNNNGTC 1 cut(s) 116
PflMI CCANNNNNTGG 1 cut(s) 449
PkrI GCNGC 1 cut(s) 535
PleI GAGTC 3 cut(s) 433, 1087, 1303
PmaCI CACGTG 1 cut(s) 671
PmlI CACGTG 1 cut(s) 671
PpsI GAGTC 3 cut(s) 433, 1087, 1303
Ppu21I YACGTR 1 cut(s) 671
PscI ACATGT 1 cut(s) 745
Psp124BI GAGCTC 1 cut(s) 553
Psp6I CCWGG 2 cut(s) 66, 1231
PspCI CACGTG 1 cut(s) 671
PspEI GGTNACC 1 cut(s) 626
PspGI CCWGG 2 cut(s) 66, 1231
PspN4I GGNNCC 5 cut(s) 131, 267, 1266, 1506, 1599
PspPI GGNCC 4 cut(s) 95, 118, 130, 1000
PstNI CAGNNNCTG 1 cut(s) 427
PsuI RGATCY 1 cut(s) 1597
PsyI GACNNNGTC 1 cut(s) 116
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 6 cut(s) 267, 866, 1146, 1168, 1352, 1371
RsaNI GTAC 6 cut(s) 266, 865, 1145, 1167, 1351, 1370
RseI CAYNNNNRTG 1 cut(s) 480
SacI GAGCTC 1 cut(s) 553
SatI GCNGC 1 cut(s) 534
Sau3AI GATC 8 cut(s) 191, 643, 647, 887, 973, 1567, 1597, 1640
Sau96I GGNCC 4 cut(s) 95, 118, 130, 1000
ScaI AGTACT 1 cut(s) 1168
SchI GAGTC 3 cut(s) 433, 1088, 1303
ScrFI CCNGG 2 cut(s) 68, 1233
SduI GDGCHC 2 cut(s) 386, 553
SfaNI GCATC 6 cut(s) 46, 472, 545, 978, 1328, 1347
SinI GGWCC 3 cut(s) 95, 118, 1000
SmiMI CAYNNNNRTG 1 cut(s) 480
SpeI ACTAGT 1 cut(s) 1163
SsiI CCGC 3 cut(s) 263, 518, 1595
SspI AATATT 1 cut(s) 818
SspMI CTAG 6 cut(s) 204, 579, 1029, 1083, 1164, 1392
SstI GAGCTC 1 cut(s) 553
StyD4I CCNGG 2 cut(s) 66, 1231
StyI CCWWGG 2 cut(s) 878, 1003
TaaI ACNGT 3 cut(s) 235, 447, 1519
TaiI ACGT 2 cut(s) 673, 718
TaqI TCGA 5 cut(s) 499, 571, 646, 886, 1188
TatI WGTACW 4 cut(s) 864, 1144, 1166, 1350
TfiI GAWTC 3 cut(s) 1217, 1433, 1619
TscAI CASTG 3 cut(s) 238, 358, 711
TseFI GTSAC 3 cut(s) 626, 736, 850
TseI GCWGC 1 cut(s) 533
Tsp45I GTSAC 3 cut(s) 626, 736, 850
TspRI CASTG 3 cut(s) 238, 358, 711
Tth111I GACNNNGTC 1 cut(s) 116
Van91I CCANNNNNTGG 1 cut(s) 449
VpaK11BI GGWCC 3 cut(s) 95, 118, 1000
XapI RAATTY 5 cut(s) 196, 410, 512, 1173, 1490
XbaI TCTAGA 1 cut(s) 578
XceI RCATGY 2 cut(s) 344, 749
XmiI GTMKAC 1 cut(s) 561
XmnI GAANNNNTTC 4 cut(s) 8, 311, 374, 691
XspI CTAG 6 cut(s) 204, 579, 1029, 1083, 1164, 1392
ZrmI AGTACT 1 cut(s) 1168
Zsp2I ATGCAT 1 cut(s) 1321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.