RchiOBHm_Chr2g0112301

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000321
Physical Location & Seq
Reverse (-)
24200632 .. 24207481
6850 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48579

Sequence Viewer

Length: 2178 bp
ATGGGTTTACCAAAAATCAAGAATGCCTCTGCTTCGGAGGAGACTGATGACAATATTACTGCCTCAATCGGGCTAAAAAGGAAACGTGGAAGAACAAGTATGGAGCGCATAGTGAACCGAGCACTTAGAGGTAAGAAATCAGTAGTTGAGTTTAACCCAAAGGGCGTACCATTTGGGAAGGCAGCAGCAGAGATGGCTTCTTACATAGGGGTGATTGTGCGTACCACGGTTCCCATCATTGTTGAGAGCTGGCCTAAGGTGGAGAAGGATCTGAAAAATGAAATTTGGAAATCCGTAGAGATGGCATTCGTCTTAGCTCCTAGATGCAGAAAAATGGTTTTATCATCTGCAGCCAATAAGTGGAGGCAATTCAAGTCAGAATTGACAACAAAATACGTACTGCCATATAAAGATCAGCCTGATGCTTTAAAAGACCCACCAGAAGAATATGATTTCATTAAGCAACAAGATTGGGAACAATTCGTAAAGAGTCGCTTAACCACAGATTTTCAGAAACTCCACATGGAGCAGAAAGAGAGAAGGGGGAAGTTGCAGAATGCTCATAGAATGTCACGAAAAGGATATGCTGGTTTAGAGGCAGAACTAAAAAAAACTATGAATGAAGATGAACTTGATCTAGCTGTCCTCTGGAAGAAAGGACGTGAGGACAAAAATGGGAATATCTCCCATGAGACTGTAGGGGAGCAGGCTGCAGAAATGGATACTTTAATGAACAATGAAGGGGATATTTCCAACTCTAACAGTCGATCAAGTGATGATGTCAGGTCAATGGGGTTGGGGACTCCAGAACATTCTAGTAGGGTTAGAAGTGCAGGAGAGTGTCTCATGCCAAATGTTTCACCTCCTCAGTTGGAGCGAGAAAGTGTCTTGGATGAGGTCAGAAAGATGATAGAGCAGCAAAGGTTATGGTTTGAAGCCAAGATTTCTTTGTTAGAGGCAAAGATCAGTGGTGATTGCCCAGCCACAAGTATCACACTTCCAACTCCTCTGCTTGCCAAGCCTTCAAAGAAGGGCAGGTGTTCTGGGAAGACAAACGTTGAGGATAATGAAATTGATTCGGAAGCTTTCTCATTTGTGGGCAGAAGAGAATTCATGAAGGGAAAATCTTGCAAGTTGGCTGTTGGATCAATCAACAATGTTGTTTCCCATGGTACAATAATTGAAATGGATGTGGCGAACCACAAAGTCCATGGTGTGCCTTTGGGAGAGGGCAATATACGTGTTGCTATTGATAATGCCCTAGATGAACAAGCGCTGCTTCCCATACCAGTTACAGGGGAATTAGCAACTGTTGGGCAAGCTGTAGGCTCTCATGTGGCTTGGCCGAAACATCTTGTTAAGTTGATGAATGAAGAGGAACGTGGAAATTCTTCTATAAAACCTCGAGATTTACCCAATCAAGATGTGATCCTGCCCAAGTCCCTCAAGCTCCTATACCGTTATGCTGAGCGTGCCATGACGGATGGTGAGCCTATCAGTGTCTTTATGGAAGAAGCCATATTTGGTATTGCCAAGACTCTCAACATTTTCAAAGAAGATGTTATGCAATTTATGGAAATGAAGGAAATCCCCCCTAGGTGCATAACAGTGTACATGAGGCACCTCTATGATATGCTAAAGCAATCCAACATGGCCAATATGGTTGGTTTGATGGACCCTTCAAGCATATCAGTTGGGGAAGGCAATTCTGACCACAGATCACAGGTGCTCGCAACCCGGTTGCAGCAAGGGTCTGCTGACCAAATACTTTTGGTACCTTACAATTCTGGTTATCATTGGATGCTGACCATCATCAGTGAAGACAAAGAAGTATGCTACTTCATGGACCCTCTTCAACGCTATTTCATGGACCCTCTCCGAAGAAGCATGCGTGAGGAAGAATGGAAATATGTTGTAAACAATGGGATTAGACAATTCAACATTGAAACGGGTAGGGGATTCCGTAAACAACCTCTATGGAAAGTATTGATGGGTCCTAAACAACCCTCAAACATGGAGTGTGGGTATTATGTGATGAGATATATGAAAGAAATCATAGAAGGTCATGACCTTTCCTTTGCAACGAAGTGGGATGGGAGGAAGCTAAATGCCTACACACAGACAGAACTGGATGAGGTGAGGTGCGAGTGGACGGACTTTGTCAGTAATTATGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

725

Amino Acids

82.41

Weight (kDa)

7.57

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 156 - 259 1.3e-07 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 373 - 455 8.7e-14 Domain of unknown function (DUF8039)
Peptidase_C48 PF02902 589 - 717 3.9e-07 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1026
Acc36I ACCTGC 1 cut(s) 1026
Acc65I GGTACC 1 cut(s) 1774
AccB1I GGYRCC 2 cut(s) 1620, 1774
AccB7I CCANNNNNTGG 1 cut(s) 360
AclI AACGTT 1 cut(s) 1056
AclWI GGATC 3 cut(s) 276, 1153, 1423
AcoI YGGCCR 2 cut(s) 1343, 1653
AcsI RAATTY 3 cut(s) 282, 1109, 1387
AfaI GTAC 6 cut(s) 168, 223, 399, 1174, 1613, 1776
AfeI AGCGCT 1 cut(s) 1275
AfiI CCNNNNNNNGG 3 cut(s) 69, 360, 1295
AflIII ACRYGT 1 cut(s) 1240
AgsI TTSAA 9 cut(s) 373, 935, 1026, 1184, 1552, 1683, 1856, 1939, 1946
AjiI CACGTC 1 cut(s) 662
AjuI GAANNNNNNNTTGG 2 cut(s) 1506, 1538
AluBI AGCT 7 cut(s) 249, 317, 641, 1085, 1322, 1450, 2104
AluI AGCT 7 cut(s) 249, 317, 641, 1085, 1322, 1450, 2104
Alw21I GWGCWC 2 cut(s) 124, 1731
Alw26I GTCTC 3 cut(s) 35, 686, 848
AlwI GGATC 3 cut(s) 276, 1153, 1423
Ama87I CYCGRG 1 cut(s) 1404
Aor51HI AGCGCT 1 cut(s) 1275
AoxI GGCC 3 cut(s) 251, 1343, 1653
ApeKI GCWGC 7 cut(s) 182, 185, 350, 710, 916, 1276, 1744
ApoI RAATTY 3 cut(s) 282, 1109, 1387
ArsI GACNNNNNNTTYG 2 cut(s) 2060, 2092
Asp700I GAANNNNTTC 1 cut(s) 1390
Asp718I GGTACC 1 cut(s) 1774
AspA2I CCTAGG 1 cut(s) 1595
AspLEI GCGC 2 cut(s) 108, 1276
AspS9I GGNCC 4 cut(s) 1675, 1846, 1870, 1994
AsuC2I CCSGG 1 cut(s) 1738
AsuHPI GGTGA 5 cut(s) 223, 852, 983, 1499, 2149
AvaI CYCGRG 1 cut(s) 1404
AvaII GGWCC 4 cut(s) 1675, 1846, 1870, 1994
AvrII CCTAGG 1 cut(s) 1595
AxyI CCTNAGG 1 cut(s) 255
BalI TGGCCA 1 cut(s) 1655
BanI GGYRCC 2 cut(s) 1620, 1774
BbsI GAAGAC 2 cut(s) 1055, 1827
Bbv12I GWGCWC 2 cut(s) 124, 1731
BbvI GCAGC 7 cut(s) 194, 197, 362, 697, 928, 1263, 1756
BccI CCATC 8 cut(s) 187, 242, 295, 1478, 1666, 1817, 1984, 2087
BciVI GTATCC 1 cut(s) 715
BcnI CCSGG 1 cut(s) 1738
BcoDI GTCTC 3 cut(s) 35, 686, 848
BfaI CTAG 5 cut(s) 321, 638, 816, 1262, 1596
BfmI CTRYAG 4 cut(s) 348, 696, 711, 1323
BfoI RGCGCY 1 cut(s) 1277
BfuAI ACCTGC 1 cut(s) 1026
BfuI GTATCC 1 cut(s) 715
BisI GCNGC 7 cut(s) 183, 186, 351, 711, 917, 1277, 1745
BlnI CCTAGG 1 cut(s) 1595
BlpI GCTNAGC 1 cut(s) 1467
BlsI GCNGC 7 cut(s) 184, 187, 352, 712, 918, 1278, 1746
Bme1390I CCNGG 1 cut(s) 1738
Bme18I GGWCC 4 cut(s) 1675, 1846, 1870, 1994
BmeT110I CYCGRG 1 cut(s) 1404
BmgBI CACGTC 1 cut(s) 662
BmgT120I GGNCC 4 cut(s) 1675, 1846, 1870, 1994
BmiI GGNNCC 7 cut(s) 231, 1622, 1677, 1776, 1848, 1872, 1995
BmrFI CCNGG 1 cut(s) 1738
BmsI GCATC 3 cut(s) 314, 412, 1791
BpiI GAAGAC 2 cut(s) 1055, 1827
BplI GAGNNNNNCTC 2 cut(s) 828, 860
BpmI CTGGAG 1 cut(s) 789
Bpu1102I GCTNAGC 1 cut(s) 1467
BpuEI CTTGAG 1 cut(s) 1430
BpuMI CCSGG 1 cut(s) 1738
BsaAI YACGTR 2 cut(s) 397, 1241
BsaJI CCNNGG 4 cut(s) 225, 1168, 1210, 1595
BsaXI ACNNNNNCTCC 2 cut(s) 2009, 2039
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 360, 1295
Bse1I ACTGG 2 cut(s) 1289, 2133
Bse21I CCTNAGG 1 cut(s) 255
BseDI CCNNGG 4 cut(s) 225, 1168, 1210, 1595
BseGI GGATG 6 cut(s) 898, 1195, 1489, 1806, 2098, 2137
BseLI CCNNNNNNNGG 3 cut(s) 69, 360, 1295
BseMII CTCAG 2 cut(s) 881, 1458
BseNI ACTGG 2 cut(s) 1289, 2133
BseRI GAGGAG 3 cut(s) 53, 855, 996
BseXI GCAGC 7 cut(s) 194, 197, 362, 697, 928, 1263, 1756
BseYI CCCAGC 1 cut(s) 979
BsgI GTGCAG 1 cut(s) 852
BshFI GGCC 3 cut(s) 253, 1345, 1655
BshNI GGYRCC 2 cut(s) 1620, 1774
BsiHKAI GWGCWC 2 cut(s) 124, 1731
BsiHKCI CYCGRG 1 cut(s) 1404
BsiSI CCGG 1 cut(s) 1738
BslFI GGGAC 2 cut(s) 814, 1426
BslI CCNNNNNNNGG 3 cut(s) 69, 360, 1295
BsmAI GTCTC 3 cut(s) 35, 686, 848
BsmFI GGGAC 2 cut(s) 814, 1426
BsmI GAATGC 3 cut(s) 28, 305, 562
BsnI GGCC 3 cut(s) 253, 1345, 1655
BsoBI CYCGRG 1 cut(s) 1404
Bsp1286I GDGCHC 2 cut(s) 124, 1731
Bsp1407I TGTACA 1 cut(s) 1611
Bsp143I GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
Bsp1720I GCTNAGC 1 cut(s) 1467
Bsp19I CCATGG 2 cut(s) 1168, 1210
BspANI GGCC 3 cut(s) 253, 1345, 1655
BspCNI CTCAG 2 cut(s) 880, 1459
BspHI TCATGA 2 cut(s) 1113, 2065
BspLI GGNNCC 7 cut(s) 231, 1622, 1677, 1776, 1848, 1872, 1995
BspMAI CTGCAG 2 cut(s) 352, 715
BspMI ACCTGC 1 cut(s) 1026
BspPI GGATC 3 cut(s) 276, 1153, 1423
BspT107I GGYRCC 2 cut(s) 1620, 1774
BsrGI TGTACA 1 cut(s) 1611
BsrI ACTGG 2 cut(s) 1289, 2133
BssECI CCNNGG 4 cut(s) 225, 1168, 1210, 1595
BssMI GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
BssT1I CCWWGG 3 cut(s) 1168, 1210, 1595
Bst4CI ACNGT 6 cut(s) 229, 697, 764, 1312, 1460, 1609
Bst6I CTCTTC 3 cut(s) 1099, 1368, 1857
BstAUI TGTACA 1 cut(s) 1611
BstBAI YACGTR 2 cut(s) 397, 1241
BstC8I GCNNGC 7 cut(s) 251, 708, 1014, 1320, 1473, 1731, 1889
BstDEI CTNAG 5 cut(s) 125, 255, 313, 867, 1467
BstDSI CCRYGG 3 cut(s) 225, 1168, 1210
BstF5I GGATG 6 cut(s) 898, 1195, 1489, 1806, 2098, 2137
BstH2I RGCGCY 1 cut(s) 1277
BstHHI GCGC 2 cut(s) 108, 1276
BstKTI GATC 8 cut(s) 271, 415, 637, 770, 966, 1148, 1431, 1721
BstMAI GTCTC 3 cut(s) 35, 686, 848
BstMBI GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
BstMWI GCNNNNNNNGC 3 cut(s) 194, 1018, 1472
BstNSI RCATGY 1 cut(s) 1891
BstSCI CCNGG 1 cut(s) 1736
BstSFI CTRYAG 4 cut(s) 348, 696, 711, 1323
BstSNI TACGTA 1 cut(s) 397
BstV1I GCAGC 7 cut(s) 194, 197, 362, 697, 928, 1263, 1756
BstV2I GAAGAC 2 cut(s) 1055, 1827
BstX2I RGATCY 1 cut(s) 268
BstYI RGATCY 1 cut(s) 268
Bsu36I CCTNAGG 1 cut(s) 255
BsuI GTATCC 1 cut(s) 715
BsuRI GGCC 3 cut(s) 253, 1345, 1655
BtgI CCRYGG 3 cut(s) 225, 1168, 1210
BtrI CACGTC 1 cut(s) 662
BtsCI GGATG 6 cut(s) 898, 1195, 1489, 1806, 2098, 2137
BtsIMutI CAGTG 4 cut(s) 973, 1504, 1614, 1822
BveI ACCTGC 1 cut(s) 1026
Cac8I GCNNGC 7 cut(s) 251, 708, 1014, 1320, 1473, 1731, 1889
CciI TCATGA 2 cut(s) 1113, 2065
CfoI GCGC 2 cut(s) 108, 1276
Cfr13I GGNCC 4 cut(s) 1675, 1846, 1870, 1994
Csp6I GTAC 6 cut(s) 167, 222, 398, 1173, 1612, 1775
CviQI GTAC 6 cut(s) 167, 222, 398, 1173, 1612, 1775
DdeI CTNAG 5 cut(s) 125, 255, 313, 867, 1467
DpnI GATC 8 cut(s) 270, 414, 636, 769, 965, 1147, 1430, 1720
DpnII GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
DraI TTTAAA 1 cut(s) 429
EaeI YGGCCR 2 cut(s) 1343, 1653
Eam1104I CTCTTC 3 cut(s) 1099, 1368, 1857
EarI CTCTTC 3 cut(s) 1099, 1368, 1857
Eco105I TACGTA 1 cut(s) 397
Eco130I CCWWGG 3 cut(s) 1168, 1210, 1595
Eco47I GGWCC 4 cut(s) 1675, 1846, 1870, 1994
Eco47III AGCGCT 1 cut(s) 1275
Eco81I CCTNAGG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 1404
EcoO109I RGGNCCY 1 cut(s) 1994
EcoRI GAATTC 1 cut(s) 1109
EcoT14I CCWWGG 3 cut(s) 1168, 1210, 1595
ErhI CCWWGG 3 cut(s) 1168, 1210, 1595
FalI AAGNNNNNCTT 6 cut(s) 479, 511, 615, 647, 1263, 1295
FaqI GGGAC 2 cut(s) 814, 1426
Fnu4HI GCNGC 7 cut(s) 183, 186, 351, 711, 917, 1277, 1745
FokI GGATG 6 cut(s) 905, 1202, 1496, 1813, 2105, 2144
Fsp4HI GCNGC 7 cut(s) 183, 186, 351, 711, 917, 1277, 1745
FspBI CTAG 5 cut(s) 321, 638, 816, 1262, 1596
GlaI GCGC 2 cut(s) 107, 1275
GluI GCNGC 7 cut(s) 183, 186, 351, 711, 917, 1277, 1745
GsaI CCCAGC 1 cut(s) 983
GsuI CTGGAG 1 cut(s) 789
HaeII RGCGCY 1 cut(s) 1277
HaeIII GGCC 3 cut(s) 253, 1345, 1655
HapII CCGG 1 cut(s) 1738
HhaI GCGC 2 cut(s) 108, 1276
Hin6I GCGC 2 cut(s) 106, 1274
HinP1I GCGC 2 cut(s) 106, 1274
HindIII AAGCTT 1 cut(s) 1083
HinfI GANTC 5 cut(s) 490, 802, 1076, 1537, 1959
HpaII CCGG 1 cut(s) 1738
HphI GGTGA 5 cut(s) 223, 852, 983, 1499, 2149
Hpy166II GTNNAC 6 cut(s) 8, 115, 1612, 1918, 1967, 2151
Hpy188I TCNGA 8 cut(s) 37, 273, 379, 513, 902, 1081, 1711, 1880
Hpy188III TCNNGA 8 cut(s) 19, 573, 649, 806, 1114, 1406, 1421, 2066
Hpy8I GTNNAC 6 cut(s) 8, 115, 1612, 1918, 1967, 2151
HpyCH4III ACNGT 6 cut(s) 229, 697, 764, 1312, 1460, 1609
HpyCH4IV ACGT 6 cut(s) 85, 396, 661, 1056, 1240, 1381
HpyF10VI GCNNNNNNNGC 3 cut(s) 194, 1018, 1472
HpyF3I CTNAG 5 cut(s) 125, 255, 313, 867, 1467
HpySE526I ACGT 6 cut(s) 85, 396, 661, 1056, 1240, 1381
HspAI GCGC 2 cut(s) 106, 1274
KpnI GGTACC 1 cut(s) 1778
Kzo9I GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
LmnI GCTCC 6 cut(s) 103, 322, 526, 703, 874, 1455
Lsp1109I GCAGC 7 cut(s) 194, 197, 362, 697, 928, 1263, 1756
LweI GCATC 3 cut(s) 314, 412, 1791
MaeI CTAG 5 cut(s) 321, 638, 816, 1262, 1596
MaeII ACGT 6 cut(s) 85, 396, 661, 1056, 1240, 1381
MaeIII GTNAC 2 cut(s) 570, 1291
MalI GATC 8 cut(s) 270, 414, 636, 769, 965, 1147, 1430, 1720
MboI GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
MflI RGATCY 1 cut(s) 268
MhlI GDGCHC 2 cut(s) 124, 1731
MlsI TGGCCA 1 cut(s) 1655
MluNI TGGCCA 1 cut(s) 1655
MlyI GAGTC 3 cut(s) 499, 796, 1531
MmeI TCCRAC 5 cut(s) 777, 852, 1025, 1123, 1671
Mox20I TGGCCA 1 cut(s) 1655
MroXI GAANNNNTTC 1 cut(s) 1390
MscI TGGCCA 1 cut(s) 1655
MseI TTAA 6 cut(s) 153, 428, 459, 497, 728, 1359
MslI CAYNNNNRTG 3 cut(s) 209, 1607, 1626
Msp20I TGGCCA 1 cut(s) 1655
MspI CCGG 1 cut(s) 1738
MspR9I CCNGG 1 cut(s) 1738
Mva1269I GAATGC 3 cut(s) 28, 305, 562
MwoI GCNNNNNNNGC 3 cut(s) 194, 1018, 1472
NciI CCSGG 1 cut(s) 1738
NcoI CCATGG 2 cut(s) 1168, 1210
NdeII GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
NlaIV GGNNCC 7 cut(s) 231, 1622, 1677, 1776, 1848, 1872, 1995
NmuCI GTSAC 1 cut(s) 570
NspI RCATGY 1 cut(s) 1891
PaeI GCATGC 1 cut(s) 1891
PaeR7I CTCGAG 1 cut(s) 1404
PagI TCATGA 2 cut(s) 1113, 2065
PaqCI CACCTGC 1 cut(s) 1026
PctI GAATGC 3 cut(s) 28, 305, 562
PdmI GAANNNNTTC 1 cut(s) 1390
PfeI GAWTC 2 cut(s) 1076, 1959
PflFI GACNNNGTC 1 cut(s) 2159
PflMI CCANNNNNTGG 1 cut(s) 360
PkrI GCNGC 7 cut(s) 184, 187, 352, 712, 918, 1278, 1746
PleI GAGTC 3 cut(s) 498, 796, 1531
PpsI GAGTC 3 cut(s) 498, 796, 1531
Ppu21I YACGTR 2 cut(s) 397, 1241
PpuMI RGGWCCY 1 cut(s) 1994
Psp1406I AACGTT 1 cut(s) 1056
Psp5II RGGWCCY 1 cut(s) 1994
PspFI CCCAGC 1 cut(s) 979
PspN4I GGNNCC 7 cut(s) 231, 1622, 1677, 1776, 1848, 1872, 1995
PspPI GGNCC 4 cut(s) 1675, 1846, 1870, 1994
PspPPI RGGWCCY 1 cut(s) 1994
PstI CTGCAG 2 cut(s) 352, 715
PsuI RGATCY 1 cut(s) 268
PsyI GACNNNGTC 1 cut(s) 2159
RsaI GTAC 6 cut(s) 168, 223, 399, 1174, 1613, 1776
RsaNI GTAC 6 cut(s) 167, 222, 398, 1173, 1612, 1775
RseI CAYNNNNRTG 3 cut(s) 209, 1607, 1626
SaqAI TTAA 6 cut(s) 153, 428, 459, 497, 728, 1359
SatI GCNGC 7 cut(s) 183, 186, 351, 711, 917, 1277, 1745
Sau3AI GATC 8 cut(s) 268, 412, 634, 767, 963, 1145, 1428, 1718
Sau96I GGNCC 4 cut(s) 1675, 1846, 1870, 1994
SchI GAGTC 3 cut(s) 499, 796, 1531
ScrFI CCNGG 1 cut(s) 1738
SduI GDGCHC 2 cut(s) 124, 1731
SfaNI GCATC 3 cut(s) 314, 412, 1791
SfcI CTRYAG 4 cut(s) 348, 696, 711, 1323
Sfr274I CTCGAG 1 cut(s) 1404
SinI GGWCC 4 cut(s) 1675, 1846, 1870, 1994
SlaI CTCGAG 1 cut(s) 1404
SmiMI CAYNNNNRTG 3 cut(s) 209, 1607, 1626
SmlI CTYRAG 2 cut(s) 1404, 1445
SmoI CTYRAG 2 cut(s) 1404, 1445
SnaBI TACGTA 1 cut(s) 397
SphI GCATGC 1 cut(s) 1891
SspI AATATT 1 cut(s) 55
SspMI CTAG 5 cut(s) 321, 638, 816, 1262, 1596
StyD4I CCNGG 1 cut(s) 1736
StyI CCWWGG 3 cut(s) 1168, 1210, 1595
TaaI ACNGT 6 cut(s) 229, 697, 764, 1312, 1460, 1609
TaiI ACGT 6 cut(s) 88, 399, 664, 1059, 1243, 1384
TaqI TCGA 2 cut(s) 766, 1405
TatI WGTACW 1 cut(s) 1611
TfiI GAWTC 2 cut(s) 1076, 1959
Tru1I TTAA 6 cut(s) 153, 428, 459, 497, 728, 1359
Tru9I TTAA 6 cut(s) 153, 428, 459, 497, 728, 1359
TscAI CASTG 4 cut(s) 973, 1504, 1614, 1822
TseFI GTSAC 1 cut(s) 570
TseI GCWGC 7 cut(s) 182, 185, 350, 710, 916, 1276, 1744
Tsp45I GTSAC 1 cut(s) 570
TspGWI ACGGA 4 cut(s) 283, 1496, 1952, 2168
TspRI CASTG 4 cut(s) 973, 1504, 1614, 1822
Tth111I GACNNNGTC 1 cut(s) 2159
Van91I CCANNNNNTGG 1 cut(s) 360
VpaK11BI GGWCC 4 cut(s) 1675, 1846, 1870, 1994
XapI RAATTY 3 cut(s) 282, 1109, 1387
XceI RCATGY 1 cut(s) 1891
XcmI CCANNNNNNNNNTGG 1 cut(s) 1208
XhoI CTCGAG 1 cut(s) 1404
XmaJI CCTAGG 1 cut(s) 1595
XmnI GAANNNNTTC 1 cut(s) 1390
XspI CTAG 5 cut(s) 321, 638, 816, 1262, 1596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.