Rorug05G0043200

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000321
Physical Location & Seq
Reverse (-)
3804934 .. 3807341
2408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0043200.1

Sequence Viewer

Length: 1740 bp
ATGGGCGAAGAAGAGCAGAGCAGCAGTCAAGGCAAAGAACCAGACCAACCCTCCGCCGCCGGAGAATCAAGTCTCCGGCAAGCCATTCAGTCCATCTCCTCCCTCATATCCCTCACCTACTCCATCAAAATCTTCGCCGGAAAATGGAAAACGATTACAGCCAAGCTCGAAGAGCTCAACTCCGGCCTCGCCGCCGTCGAAAACTCCGACGGAGATGAAAACCCAGTTCTCTCCGGCGTTCTGTCGAAGACGTTAGCTACCATTAACGAGTGCCACGATCTTGCTCGGCGCTGCGTCGATCTTTCCTACTCCGGCAAGCTTCTGATGCAGAGCGACCTGGACAAGCTCGCCGCGAAGCTCGATCTCCACGCCGGAAGCCTCTCGGAAATCTACAACGCCGGCGTGCTGACTCACCGCTTCGCCATCGTGGTCTCGAGACCCGGGAACGGGGCTTGCAGAGACGACATGAGGTTTTACGTGAGGGACTTGATGACGAGAATGAAGGTTGGCGACGCGGAGATGAAGCGCCAAGCTTTGGAGAATTTGTACGAGTCGATTGTGGAAGACGACAAGTATGTAAAGGTGGTCGTGGAGCAGAGTGAGATTGTGGGTTTGTTGATTGGTTTTCTTGATTCGAATGAGGTGGGAATCCAAGATGGGTCGGCGAAGATCGTGGCTTTGGTTGCTGGGTTTGGATTGTATAAGGGAGTTTTGATCGGAGCCGGAGTTATTGCGCCGTTGATAAGGGTTTTGGAGAGTGGAAGTGAAAGTGGGAAAGAAGGAGCTGCGAGAAGTTTGCAGAGGTTAACTGAGAATGGGGATAATGGGTGGTCTATTTCAGCTCATGGAGGAGTCACAGCTCTGCTTAAGTTATGTGAATGTGGGGAGAGCTCAGGTGGGTTGGTTGGTTCAGCTTGTGGGGTGCTTAAGAATCTTGTGGGGGTGGAAGAGATAAAGAGGTTCATGGTTGAAGAAGGAGCTGTAGGGACTTTTATTGGGCTTGTGAGGTCTAAAGAGGAAGGGTTGCAGATAAATGCAATTGAGTTTCTGCAGAATATAGCTTCTGGGGATGAAGGGATTCGGAATTTGGTGATTAAGGAGGGTGGGATTCGATCATTGCTTCGCGTTTCGGAGCCAAGATCGGATTGTTCGTGCAAAGTGAGGGAGATTGCGTTGAGGGCAATTGAGAATTTGTGTTTTTGTTGCAGTAGTAGTGTTAGTGTTTTGATCAAGTACGGGTTTGTGGATCAGCTGATGTATTTTTTGAGAAATGGGGAGGTTTCGAGTCAGGAATTGGCGTTGAAAGTGGCGATTAGGCTTTGTGAAGCGTCAGAGGAAGCCAAGAAGGCAATGGGGGATGCAAATTTCATGACAGAGCTGGTTAAGTTTCTTGATTCCAAGTCATTTGAGGTTCGGGAAATGGCGGCCGAGGCACTCTCCAGCATGGTTTTGAACCCCAAAAATCGAAAACGTTTCGTGCAGGATGATCGGAACATACGCCTTCTCCTGCAGCGGTTTGATCCAGACCAGCTAGGAAATGCAGGTAACAAGAAGTTCTTGTTCTCCATTTTAATGTCATTGACAAGTTGCAACAGTGGGAGAAGGAAAATTGCCCATTCTGGGTACTTGAAAAACATTGAGAAACTTGCAGAAGCAGAAGTTTCTGATGCCAAGAGACTTGTCAAGAAGTTATCCACAAACAGATTTCGAAGTATGTTAAGTGGAATCTGGCATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

579

Amino Acids

63.02

Weight (kDa)

6.22

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7032 PF23005 26 - 135 9.2e-36 Domain of unknown function (DUF7032)
ARM_ARMC5 PF24768 195 - 406 1.9e-08 ARMC5
ARM_PUB PF25598 256 - 479 8.9e-09 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 304 - 504 3.4e-09 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1532
AccB7I CCANNNNNTGG 1 cut(s) 535
AccII CGCG 3 cut(s) 353, 515, 1125
AciI CCGC 8 cut(s) 54, 57, 192, 351, 415, 515, 1424, 1513
AclI AACGTT 1 cut(s) 1471
AclWI GGATC 2 cut(s) 1254, 1514
AcoI YGGCCR 1 cut(s) 1425
AcsI RAATTY 4 cut(s) 541, 1084, 1189, 1363
AfaI GTAC 3 cut(s) 548, 1235, 1625
AfiI CCNNNNNNNGG 5 cut(s) 144, 446, 447, 535, 1620
AflII CTTAAG 2 cut(s) 866, 926
AgsI TTSAA 4 cut(s) 971, 1303, 1453, 1630
AjnI CCWGG 1 cut(s) 336
Alw21I GWGCWC 2 cut(s) 177, 893
Alw26I GTCTC 5 cut(s) 77, 430, 436, 453, 1669
AlwI GGATC 2 cut(s) 1254, 1514
Ama87I CYCGRG 2 cut(s) 433, 440
AoxI GGCC 2 cut(s) 184, 1425
ApeKI GCWGC 4 cut(s) 21, 291, 785, 1510
ApoI RAATTY 4 cut(s) 541, 1084, 1189, 1363
Asp700I GAANNNNTTC 1 cut(s) 1077
AspLEI GCGC 3 cut(s) 291, 528, 736
AsuC2I CCSGG 2 cut(s) 441, 442
AsuHPI GGTGA 3 cut(s) 106, 404, 1102
AsuII TTCGAA 2 cut(s) 635, 1708
AvaI CYCGRG 2 cut(s) 433, 440
BanII GRGCYC 2 cut(s) 177, 893
BbsI GAAGAC 2 cut(s) 254, 570
Bbv12I GWGCWC 2 cut(s) 177, 893
BbvI GCAGC 4 cut(s) 33, 278, 772, 1522
BccI CCATC 4 cut(s) 101, 131, 431, 650
BceAI ACGGC 2 cut(s) 179, 721
BcgI CGANNNNNNTGC 4 cut(s) 778, 812, 1469, 1503
BciT130I CCWGG 1 cut(s) 338
BclI TGATCA 1 cut(s) 1227
BcnI CCSGG 2 cut(s) 441, 442
BcoDI GTCTC 5 cut(s) 77, 430, 436, 453, 1669
BfaI CTAG 1 cut(s) 1532
BfmI CTRYAG 3 cut(s) 981, 1049, 1508
BfoI RGCGCY 2 cut(s) 292, 529
BfrI CTTAAG 2 cut(s) 866, 926
BfuAI ACCTGC 1 cut(s) 1532
BglI GCCNNNNNGGC 1 cut(s) 1346
BisI GCNGC 8 cut(s) 22, 57, 192, 292, 351, 786, 1425, 1511
BlsI GCNGC 8 cut(s) 23, 58, 193, 293, 352, 787, 1426, 1512
Bme1390I CCNGG 3 cut(s) 338, 441, 442
BmeT110I CYCGRG 2 cut(s) 433, 440
BmiI GGNNCC 2 cut(s) 721, 1134
BmrFI CCNGG 3 cut(s) 338, 441, 442
BmrI ACTGGG 1 cut(s) 218
BmsI GCATC 3 cut(s) 315, 1348, 1657
BmuI ACTGGG 1 cut(s) 218
BpiI GAAGAC 2 cut(s) 254, 570
BplI GAGNNNNNCTC 4 cut(s) 164, 196, 1421, 1453
BpmI CTGGAG 1 cut(s) 1423
Bpu10I CCTNAGC 1 cut(s) 892
Bpu14I TTCGAA 2 cut(s) 635, 1708
BpuMI CCSGG 2 cut(s) 441, 442
BsaAI YACGTR 1 cut(s) 478
BsaI GGTCTC 2 cut(s) 430, 436
BsaJI CCNNGG 2 cut(s) 440, 1428
Bsc4I CCNNNNNNNGG 5 cut(s) 144, 446, 447, 535, 1620
Bse118I RCCGGY 1 cut(s) 398
Bse1I ACTGG 1 cut(s) 224
Bse3DI GCAATG 2 cut(s) 1115, 1356
BseBI CCWGG 1 cut(s) 338
BseDI CCNNGG 2 cut(s) 440, 1428
BseGI GGATG 3 cut(s) 1075, 1363, 1489
BseLI CCNNNNNNNGG 5 cut(s) 144, 446, 447, 535, 1620
BseMI GCAATG 2 cut(s) 1115, 1356
BseMII CTCAG 2 cut(s) 801, 906
BseNI ACTGG 1 cut(s) 224
BseRI GAGGAG 2 cut(s) 88, 864
BseX3I CGGCCG 1 cut(s) 1425
BseXI GCAGC 4 cut(s) 33, 278, 772, 1522
BseYI CCCAGC 1 cut(s) 686
BsgI GTGCAG 1 cut(s) 1499
Bsh1236I CGCG 3 cut(s) 353, 515, 1125
Bsh1285I CGRYCG 1 cut(s) 1428
BshFI GGCC 2 cut(s) 186, 1427
BsiEI CGRYCG 1 cut(s) 1428
BsiHKAI GWGCWC 2 cut(s) 177, 893
BsiHKCI CYCGRG 2 cut(s) 433, 440
BslFI GGGAC 2 cut(s) 497, 1000
BslI CCNNNNNNNGG 5 cut(s) 144, 446, 447, 535, 1620
BsmAI GTCTC 5 cut(s) 77, 430, 436, 453, 1669
BsmBI CGTCTC 1 cut(s) 453
BsmFI GGGAC 2 cut(s) 497, 1000
BsmI GAATGC 1 cut(s) 1732
BsnI GGCC 2 cut(s) 186, 1427
Bso31I GGTCTC 2 cut(s) 430, 436
BsoBI CYCGRG 2 cut(s) 433, 440
Bsp119I TTCGAA 2 cut(s) 635, 1708
Bsp1286I GDGCHC 2 cut(s) 177, 893
BspACI CCGC 8 cut(s) 54, 57, 192, 351, 415, 515, 1424, 1513
BspANI GGCC 2 cut(s) 186, 1427
BspCNI CTCAG 2 cut(s) 802, 905
BspFNI CGCG 3 cut(s) 353, 515, 1125
BspHI TCATGA 1 cut(s) 1368
BspLI GGNNCC 2 cut(s) 721, 1134
BspMAI CTGCAG 2 cut(s) 1053, 1512
BspMI ACCTGC 1 cut(s) 1532
BspPI GGATC 2 cut(s) 1254, 1514
BspQI GCTCTTC 2 cut(s) 6, 165
BspT104I TTCGAA 2 cut(s) 635, 1708
BspTI CTTAAG 2 cut(s) 866, 926
BspTNI GGTCTC 2 cut(s) 430, 436
BsrDI GCAATG 2 cut(s) 1115, 1356
BsrFI RCCGGY 1 cut(s) 398
BsrI ACTGG 1 cut(s) 224
BssAI RCCGGY 1 cut(s) 398
BssECI CCNNGG 2 cut(s) 440, 1428
Bst2UI CCWGG 1 cut(s) 338
Bst4CI ACNGT 1 cut(s) 1595
Bst6I CTCTTC 3 cut(s) 6, 165, 942
BstAFI CTTAAG 2 cut(s) 866, 926
BstBAI YACGTR 1 cut(s) 478
BstBI TTCGAA 2 cut(s) 635, 1708
BstC8I GCNNGC 6 cut(s) 81, 317, 348, 400, 404, 454
BstDEI CTNAG 2 cut(s) 810, 892
BstF5I GGATG 3 cut(s) 1075, 1363, 1489
BstFNI CGCG 3 cut(s) 353, 515, 1125
BstH2I RGCGCY 2 cut(s) 292, 529
BstHHI GCGC 3 cut(s) 291, 528, 736
BstMAI GTCTC 5 cut(s) 77, 430, 436, 453, 1669
BstMCI CGRYCG 1 cut(s) 1428
BstMWI GCNNNNNNNGC 7 cut(s) 30, 172, 325, 683, 1178, 1346, 1430
BstNI CCWGG 1 cut(s) 338
BstSCI CCNGG 3 cut(s) 336, 439, 440
BstSFI CTRYAG 3 cut(s) 981, 1049, 1508
BstUI CGCG 3 cut(s) 353, 515, 1125
BstV1I GCAGC 4 cut(s) 33, 278, 772, 1522
BstV2I GAAGAC 2 cut(s) 254, 570
BstZI CGGCCG 1 cut(s) 1425
BsuRI GGCC 2 cut(s) 186, 1427
BtsCI GGATG 3 cut(s) 1075, 1363, 1489
BtsIMutI CAGTG 1 cut(s) 1600
BveI ACCTGC 1 cut(s) 1532
Cac8I GCNNGC 6 cut(s) 81, 317, 348, 400, 404, 454
CciI TCATGA 1 cut(s) 1368
CfoI GCGC 3 cut(s) 291, 528, 736
Cfr10I RCCGGY 1 cut(s) 398
Cfr9I CCCGGG 1 cut(s) 440
CseI GACGC 3 cut(s) 283, 521, 1317
Csp6I GTAC 3 cut(s) 547, 1234, 1624
CviAII CATG 5 cut(s) 466, 845, 964, 1369, 1444
CviQI GTAC 3 cut(s) 547, 1234, 1624
DdeI CTNAG 2 cut(s) 810, 892
EaeI YGGCCR 1 cut(s) 1425
EagI CGGCCG 1 cut(s) 1425
Eam1104I CTCTTC 3 cut(s) 6, 165, 942
EarI CTCTTC 3 cut(s) 6, 165, 942
EciI GGCGGA 1 cut(s) 43
Ecl136II GAGCTC 2 cut(s) 175, 891
EclXI CGGCCG 1 cut(s) 1425
Eco24I GRGCYC 2 cut(s) 177, 893
Eco31I GGTCTC 2 cut(s) 430, 436
Eco52I CGGCCG 1 cut(s) 1425
Eco53kI GAGCTC 2 cut(s) 175, 891
Eco88I CYCGRG 2 cut(s) 433, 440
EcoICRI GAGCTC 2 cut(s) 175, 891
EcoRII CCWGG 1 cut(s) 336
EcoT38I GRGCYC 2 cut(s) 177, 893
Esp3I CGTCTC 1 cut(s) 453
FaeI CATG 5 cut(s) 469, 848, 967, 1372, 1447
FalI AAGNNNNNCTT 2 cut(s) 1541, 1573
FaqI GGGAC 2 cut(s) 497, 1000
FatI CATG 5 cut(s) 465, 844, 963, 1368, 1443
FbaI TGATCA 1 cut(s) 1227
Fnu4HI GCNGC 8 cut(s) 22, 57, 192, 292, 351, 786, 1425, 1511
FokI GGATG 3 cut(s) 1082, 1370, 1496
FriOI GRGCYC 2 cut(s) 177, 893
Fsp4HI GCNGC 8 cut(s) 22, 57, 192, 292, 351, 786, 1425, 1511
FspBI CTAG 1 cut(s) 1532
GlaI GCGC 3 cut(s) 290, 527, 735
GluI GCNGC 8 cut(s) 22, 57, 192, 292, 351, 786, 1425, 1511
GsaI CCCAGC 1 cut(s) 690
GsuI CTGGAG 1 cut(s) 1423
HaeII RGCGCY 2 cut(s) 292, 529
HaeIII GGCC 2 cut(s) 186, 1427
HgaI GACGC 3 cut(s) 283, 521, 1317
HhaI GCGC 3 cut(s) 291, 528, 736
Hin1II CATG 5 cut(s) 469, 848, 967, 1372, 1447
Hin6I GCGC 3 cut(s) 289, 526, 734
HinP1I GCGC 3 cut(s) 289, 526, 734
HincII GTYRAC 1 cut(s) 807
HindII GTYRAC 1 cut(s) 807
HindIII AAGCTT 2 cut(s) 317, 531
HpaI GTTAAC 1 cut(s) 807
HphI GGTGA 3 cut(s) 106, 404, 1102
Hpy166II GTNNAC 1 cut(s) 807
Hpy8I GTNNAC 1 cut(s) 807
Hpy99I CGWCG 4 cut(s) 200, 212, 299, 515
HpyAV CCTTC 8 cut(s) 496, 773, 968, 1013, 1067, 1339, 1511, 1596
HpyCH4III ACNGT 1 cut(s) 1595
HpyCH4IV ACGT 3 cut(s) 251, 477, 1471
HpyF10VI GCNNNNNNNGC 7 cut(s) 30, 172, 325, 683, 1178, 1346, 1430
HpyF3I CTNAG 2 cut(s) 810, 892
HpySE526I ACGT 3 cut(s) 251, 477, 1471
Hsp92II CATG 5 cut(s) 469, 848, 967, 1372, 1447
HspAI GCGC 3 cut(s) 289, 526, 734
KroI GCCGGC 1 cut(s) 398
KroNI GCCGGC 1 cut(s) 400
Ksp22I TGATCA 1 cut(s) 1227
KspAI GTTAAC 1 cut(s) 807
LguI GCTCTTC 2 cut(s) 6, 165
LmnI GCTCC 5 cut(s) 592, 719, 782, 977, 1132
Lsp1109I GCAGC 4 cut(s) 33, 278, 772, 1522
LweI GCATC 3 cut(s) 315, 1348, 1657
MaeI CTAG 1 cut(s) 1532
MaeII ACGT 3 cut(s) 251, 477, 1471
MaeIII GTNAC 2 cut(s) 853, 1544
MboII GAAGA 9 cut(s) 20, 23, 124, 182, 259, 575, 679, 959, 983
MfeI CAATTG 2 cut(s) 1038, 1182
MhlI GDGCHC 2 cut(s) 177, 893
MluCI AATT 8 cut(s) 541, 1038, 1084, 1182, 1189, 1292, 1363, 1608
MlyI GAGTC 4 cut(s) 403, 560, 861, 1294
MmeI TCCRAC 1 cut(s) 231
MreI CGCCGGCG 1 cut(s) 398
MroNI GCCGGC 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 1077
MseI TTAA 8 cut(s) 264, 806, 867, 927, 1095, 1383, 1571, 1718
MslI CAYNNNNRTG 1 cut(s) 1571
MspA1I CMGCKG 2 cut(s) 1252, 1513
MspCI CTTAAG 2 cut(s) 866, 926
MspR9I CCNGG 3 cut(s) 338, 441, 442
MunI CAATTG 2 cut(s) 1038, 1182
Mva1269I GAATGC 1 cut(s) 1732
MvaI CCWGG 1 cut(s) 338
MvnI CGCG 3 cut(s) 353, 515, 1125
MwoI GCNNNNNNNGC 7 cut(s) 30, 172, 325, 683, 1178, 1346, 1430
NaeI GCCGGC 1 cut(s) 400
NciI CCSGG 2 cut(s) 441, 442
NgoMIV GCCGGC 1 cut(s) 398
NlaIII CATG 5 cut(s) 469, 848, 967, 1372, 1447
NlaIV GGNNCC 2 cut(s) 721, 1134
NmeAIII GCCGAG 2 cut(s) 265, 1453
NmuCI GTSAC 1 cut(s) 853
NspV TTCGAA 2 cut(s) 635, 1708
PaeR7I CTCGAG 1 cut(s) 433
PagI TCATGA 1 cut(s) 1368
PciSI GCTCTTC 2 cut(s) 6, 165
PcsI WCGNNNNNNNCGW 4 cut(s) 195, 204, 273, 1148
PctI GAATGC 1 cut(s) 1732
PdiI GCCGGC 1 cut(s) 400
PdmI GAANNNNTTC 1 cut(s) 1077
PfeI GAWTC 8 cut(s) 65, 632, 648, 931, 1078, 1108, 1394, 1725
PflMI CCANNNNNTGG 1 cut(s) 535
PkrI GCNGC 8 cut(s) 23, 58, 193, 293, 352, 787, 1426, 1512
PleI GAGTC 4 cut(s) 403, 559, 860, 1293
PpsI GAGTC 4 cut(s) 403, 559, 860, 1293
Ppu21I YACGTR 1 cut(s) 478
Psp124BI GAGCTC 2 cut(s) 177, 893
Psp1406I AACGTT 1 cut(s) 1471
Psp6I CCWGG 1 cut(s) 336
PspFI CCCAGC 1 cut(s) 686
PspGI CCWGG 1 cut(s) 336
PspN4I GGNNCC 2 cut(s) 721, 1134
PstI CTGCAG 2 cut(s) 1053, 1512
PvuII CAGCTG 1 cut(s) 1252
RsaI GTAC 3 cut(s) 548, 1235, 1625
RsaNI GTAC 3 cut(s) 547, 1234, 1624
RseI CAYNNNNRTG 1 cut(s) 1571
SacI GAGCTC 2 cut(s) 177, 893
SapI GCTCTTC 2 cut(s) 6, 165
SaqAI TTAA 8 cut(s) 264, 806, 867, 927, 1095, 1383, 1571, 1718
SatI GCNGC 8 cut(s) 22, 57, 192, 292, 351, 786, 1425, 1511
SchI GAGTC 4 cut(s) 403, 560, 861, 1294
ScrFI CCNGG 3 cut(s) 338, 441, 442
SduI GDGCHC 2 cut(s) 177, 893
SfaNI GCATC 3 cut(s) 315, 1348, 1657
SfcI CTRYAG 3 cut(s) 981, 1049, 1508
Sfr274I CTCGAG 1 cut(s) 433
SfuI TTCGAA 2 cut(s) 635, 1708
SgrAI CRCCGGYG 1 cut(s) 398
SlaI CTCGAG 1 cut(s) 433
SmaI CCCGGG 1 cut(s) 442
SmiMI CAYNNNNRTG 1 cut(s) 1571
SmlI CTYRAG 3 cut(s) 433, 866, 926
SmoI CTYRAG 3 cut(s) 433, 866, 926
Sse9I AATT 8 cut(s) 541, 1038, 1084, 1182, 1189, 1292, 1363, 1608
SsiI CCGC 8 cut(s) 54, 57, 192, 351, 415, 515, 1424, 1513
SspMI CTAG 1 cut(s) 1532
SstI GAGCTC 2 cut(s) 177, 893
StyD4I CCNGG 3 cut(s) 336, 439, 440
TaaI ACNGT 1 cut(s) 1595
TaiI ACGT 3 cut(s) 254, 480, 1474
TasI AATT 8 cut(s) 541, 1038, 1084, 1182, 1189, 1292, 1363, 1608
TauI GCSGC 4 cut(s) 59, 194, 353, 1427
TfiI GAWTC 8 cut(s) 65, 632, 648, 931, 1078, 1108, 1394, 1725
Tru1I TTAA 8 cut(s) 264, 806, 867, 927, 1095, 1383, 1571, 1718
Tru9I TTAA 8 cut(s) 264, 806, 867, 927, 1095, 1383, 1571, 1718
TscAI CASTG 1 cut(s) 1600
TseFI GTSAC 1 cut(s) 853
TseI GCWGC 4 cut(s) 21, 291, 785, 1510
Tsp45I GTSAC 1 cut(s) 853
TspDTI ATGAA 6 cut(s) 231, 515, 536, 952, 1086, 1357
TspGWI ACGGA 1 cut(s) 225
TspMI CCCGGG 1 cut(s) 440
TspRI CASTG 1 cut(s) 1600
Van91I CCANNNNNTGG 1 cut(s) 535
Vha464I CTTAAG 2 cut(s) 866, 926
XapI RAATTY 4 cut(s) 541, 1084, 1189, 1363
XcmI CCANNNNNNNNNTGG 1 cut(s) 1348
XhoI CTCGAG 1 cut(s) 433
XmaI CCCGGG 1 cut(s) 440
XmnI GAANNNNTTC 1 cut(s) 1077
XspI CTAG 1 cut(s) 1532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.