Rh1DG131700

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000321
Physical Location & Seq
Forward (+)
27450401 .. 27453378
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG131700.1

Sequence Viewer

Length: 1773 bp
ATGGACTACTTGAATGGACTTTTGTCTATAATGGTGAATCTTACAGTTCTAGCCAAGATGAAACACTTTAAAGACAATCATTTAGAATGCGATGATGAATATACGGATGAGGATGCAGATGACCAGGCCACAAACAAGAGGAAGGGGAGAGGTCCAACTTTGATGTCAGACTTGGTCCATTGTAGGGGCGGTAAGGGTCGTATAGAAGTTGGATATAACACAAAAGGACAGCCAGAAGGCAAGCATGGATCAAATTTAGCTAGTTTCATAGGAGTAATGACACGAAGCACTGTTCCAATTATATATAAAGATTGGAAAGCGGTACCACCTTCTTTAAAGGATAAGATATGGGACATGGTTCTGAAAGCATTCATCGTGGATATGAATAGTAGGAAGCATGTCATAAGCAGTGTTGGAAAGGCATGGAAATCATTCAAGAGCACTTTAACAACATCATATATATTGAAATTCAAACATCAGCCTCACAAGCTAAAGACTCCACCTCTTGGCTATGATTTCATCCTTCAAACACATTGGGATGCCTTTGTGAAGTCTCGATTAACAGAAGAATTTGCGGAAATTAGAGAAGCTGCATCAAGGAGGCGAGTTCTCTATGTATACAATCATCGAATGTCTAGAAAAGGCTATGCCAAATTGGAAGAAGAACTAAAGTTGGCTTCAGGTGACCAAATTGATATTGATCAGTCAGTTCTGTGGAAGAAAGCACGTGTTGATAAAGATGGAAACTATTCAAATGAGGCAGTGAAACAACGTGTTGATAAAATTGATGAAGTGACTAAACATGTTGAGGATGGTATTATATCAACAGCCGGTAGTAATGACATACTAGCAATGGCTTTGGAAAAGCCTGAATATTCCGGTCGTGTAAGAGGTGTTGGAAGCAATGTCACACCTATTTTGTACTTCAATACTCCAAGGTGTCGATCTCAATCCACCCAAAATCAGTTGCTACAACAAATGGAGCAAATGCAGAACCAGCTTTTAATGTTTACTCAACTGCTACAACCTGATCAATTGTTAATGATGCAACACATGGTCCAAGGTAGCCGTGTGTCTGACAAATCTAGTTGCTCAGTTCAGAAAGACAAATATGAGACATTATCTAAGGAGGAGGTGTCTAGGGTGGAAATGATGAAAGGAATTGAGAACAAATCCAAGAAAGCTACATTTAACGTCAATGTACAAGAGGCTTTGAAGAGTAGTACTAAAATTACAGAAGAAATCAAGAAGGTAAAGCAACACAATAAAGAAGAATCAGCTTTGAAACCTGGAAAAAACAAACAAGATGGCTATACAGAGGTTCCCAAAGACAAGCCACAAGATATTGAGAAGCCCAAGCTAAAGACTCCAAATGCATCATTTAAACACTCGTTGCCACAAAACTTGTACAAGATGCCTCTATCTGTGCGATTTCTATTGCGTTTTGCTAAGACAATGCGAGAAGAAAAACCATTGAAGGTGGCCATTGAGTCTGGTGTCTTCGGATATGAACAAGACACTTATCTGAACAAAGATGATGTCATTGAATTTTGTTCGATGGAACCACTCTCTTCTGTTTGCATGACAATCTACATGAGACATCTGTGGTCATTATTAAAGAAAGATCATAAGGATAACTTGTATGGATTTGCGGATCCATCTTCCTTCTCTCATGATTCTGGAAAACGAGATGAAAGATCGTTTGCATTGTCAATAAGATTAGAGAAAAGCAAGGAACAGCAATTGATTTTTGCTCCTTACAATTTTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

590

Amino Acids

67.65

Weight (kDa)

9.22

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 176 - 305 9.1e-13 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 322
AccB1I GGYRCC 1 cut(s) 322
AccB7I CCANNNNNTGG 1 cut(s) 506
AccI GTMKAC 1 cut(s) 618
AciI CCGC 4 cut(s) 189, 320, 575, 1652
AclWI GGATC 3 cut(s) 256, 1649, 1662
AcoI YGGCCR 1 cut(s) 1482
AcsI RAATTY 4 cut(s) 253, 467, 569, 1547
AcuI CTGAAG 1 cut(s) 663
AcvI CACGTG 1 cut(s) 728
AfaI GTAC 5 cut(s) 324, 923, 1203, 1225, 1409
AfiI CCNNNNNNNGG 2 cut(s) 184, 506
AflIII ACRYGT 3 cut(s) 727, 772, 802
AjnI CCWGG 2 cut(s) 123, 1288
AluBI AGCT 7 cut(s) 260, 490, 590, 1000, 1184, 1280, 1360
AluI AGCT 7 cut(s) 260, 490, 590, 1000, 1184, 1280, 1360
Alw21I GWGCWC 1 cut(s) 443
Alw26I GTCTC 3 cut(s) 558, 1109, 1591
AlwI GGATC 3 cut(s) 256, 1649, 1662
AoxI GGCC 2 cut(s) 126, 1482
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 4 cut(s) 253, 467, 569, 1547
ArsI GACNNNNNNTTYG 2 cut(s) 1524, 1556
Asp700I GAANNNNTTC 3 cut(s) 368, 431, 748
Asp718I GGTACC 1 cut(s) 322
AspS9I GGNCC 3 cut(s) 152, 175, 1057
AsuHPI GGTGA 2 cut(s) 46, 695
AvaII GGWCC 3 cut(s) 152, 175, 1057
BalI TGGCCA 1 cut(s) 1484
BamHI GGATCC 1 cut(s) 1654
BanI GGYRCC 1 cut(s) 322
BbrPI CACGTG 1 cut(s) 728
BbsI GAAGAC 1 cut(s) 1492
Bbv12I GWGCWC 1 cut(s) 443
BbvI GCAGC 1 cut(s) 577
BccI CCATC 5 cut(s) 734, 806, 1301, 1552, 1666
BceAI ACGGC 1 cut(s) 1053
BciT130I CCWGG 2 cut(s) 125, 1290
BclI TGATCA 2 cut(s) 700, 1030
BcoDI GTCTC 3 cut(s) 558, 1109, 1591
BfaI CTAG 6 cut(s) 50, 261, 636, 848, 1086, 1140
BisI GCNGC 1 cut(s) 591
BlsI GCNGC 1 cut(s) 592
BmcAI AGTACT 1 cut(s) 1225
Bme1390I CCNGG 2 cut(s) 125, 1290
Bme18I GGWCC 3 cut(s) 152, 175, 1057
BmgT120I GGNCC 3 cut(s) 152, 175, 1057
BmiI GGNNCC 4 cut(s) 324, 1323, 1563, 1656
BmrFI CCNGG 2 cut(s) 125, 1290
BmsI GCATC 6 cut(s) 103, 529, 602, 1035, 1385, 1404
BoxI GACNNNNGTC 1 cut(s) 22
BpiI GAAGAC 1 cut(s) 1492
BsaAI YACGTR 1 cut(s) 728
BsaBI GATNNNNATC 2 cut(s) 699, 949
BsaJI CCNNGG 2 cut(s) 935, 1060
BsaWI WCCGGW 1 cut(s) 878
BsaXI ACNNNNNCTCC 2 cut(s) 1121, 1151
Bsc4I CCNNNNNNNGG 2 cut(s) 184, 506
Bse118I RCCGGY 1 cut(s) 830
Bse3DI GCAATG 2 cut(s) 858, 910
Bse8I GATNNNNATC 2 cut(s) 699, 949
BseBI CCWGG 2 cut(s) 125, 1290
BseDI CCNNGG 2 cut(s) 935, 1060
BseGI GGATG 5 cut(s) 112, 118, 519, 544, 817
BseJI GATNNNNATC 2 cut(s) 699, 949
BseLI CCNNNNNNNGG 2 cut(s) 184, 506
BseMI GCAATG 2 cut(s) 858, 910
BseMII CTCAG 1 cut(s) 1107
BseRI GAGGAG 1 cut(s) 1145
BseXI GCAGC 1 cut(s) 577
Bsh1285I CGRYCG 1 cut(s) 883
BshFI GGCC 2 cut(s) 128, 1484
BshNI GGYRCC 1 cut(s) 322
BsiEI CGRYCG 1 cut(s) 883
BsiHKAI GWGCWC 1 cut(s) 443
BsiSI CCGG 2 cut(s) 831, 879
BslFI GGGAC 1 cut(s) 365
BslI CCNNNNNNNGG 2 cut(s) 184, 506
BsmAI GTCTC 3 cut(s) 558, 1109, 1591
BsmFI GGGAC 1 cut(s) 365
BsmI GAATGC 2 cut(s) 92, 368
BsnI GGCC 2 cut(s) 128, 1484
Bsp1286I GDGCHC 1 cut(s) 443
Bsp1407I TGTACA 2 cut(s) 1201, 1407
Bsp143I GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
BspACI CCGC 4 cut(s) 189, 320, 575, 1652
BspANI GGCC 2 cut(s) 128, 1484
BspCNI CTCAG 1 cut(s) 1106
BspHI TCATGA 1 cut(s) 1672
BspLI GGNNCC 4 cut(s) 324, 1323, 1563, 1656
BspPI GGATC 3 cut(s) 256, 1649, 1662
BspT107I GGYRCC 1 cut(s) 322
BsrDI GCAATG 2 cut(s) 858, 910
BsrFI RCCGGY 1 cut(s) 830
BsrGI TGTACA 2 cut(s) 1201, 1407
BssAI RCCGGY 1 cut(s) 830
BssECI CCNNGG 2 cut(s) 935, 1060
BssMI GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
BssNAI GTATAC 1 cut(s) 619
BssT1I CCWWGG 2 cut(s) 935, 1060
Bst1107I GTATAC 1 cut(s) 619
Bst2UI CCWGG 2 cut(s) 125, 1290
Bst4CI ACNGT 2 cut(s) 46, 292
Bst6I CTCTTC 2 cut(s) 1211, 1576
BstAUI TGTACA 2 cut(s) 1201, 1407
BstBAI YACGTR 1 cut(s) 728
BstC8I GCNNGC 1 cut(s) 242
BstDEI CTNAG 3 cut(s) 1093, 1125, 1449
BstEII GGTNACC 1 cut(s) 683
BstF5I GGATG 5 cut(s) 112, 118, 519, 544, 817
BstKTI GATC 7 cut(s) 251, 703, 947, 1033, 1627, 1657, 1700
BstMAI GTCTC 3 cut(s) 558, 1109, 1591
BstMBI GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
BstMCI CGRYCG 1 cut(s) 883
BstMWI GCNNNNNNNGC 2 cut(s) 487, 997
BstNI CCWGG 2 cut(s) 125, 1290
BstNSI RCATGY 2 cut(s) 401, 806
BstPAI GACNNNNGTC 1 cut(s) 22
BstPI GGTNACC 1 cut(s) 683
BstSCI CCNGG 2 cut(s) 123, 1288
BstV1I GCAGC 1 cut(s) 577
BstV2I GAAGAC 1 cut(s) 1492
BstX2I RGATCY 1 cut(s) 1654
BstYI RGATCY 1 cut(s) 1654
BstZ17I GTATAC 1 cut(s) 619
BsuRI GGCC 2 cut(s) 128, 1484
BtgZI GCGATG 1 cut(s) 105
BtsCI GGATG 5 cut(s) 112, 118, 519, 544, 817
BtsI GCAGTG 2 cut(s) 415, 768
BtsIMutI CAGTG 3 cut(s) 288, 415, 768
Cac8I GCNNGC 1 cut(s) 242
CciI TCATGA 1 cut(s) 1672
Cfr10I RCCGGY 1 cut(s) 830
Cfr13I GGNCC 3 cut(s) 152, 175, 1057
Csp6I GTAC 5 cut(s) 323, 922, 1202, 1224, 1408
CspCI CAANNNNNGTGG 2 cut(s) 1386, 1421
CviAII CATG 9 cut(s) 245, 355, 398, 423, 803, 1054, 1582, 1594, 1673
CviQI GTAC 5 cut(s) 323, 922, 1202, 1224, 1408
DdeI CTNAG 3 cut(s) 1093, 1125, 1449
DpnI GATC 7 cut(s) 250, 702, 946, 1032, 1626, 1656, 1699
DpnII GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
DraI TTTAAA 3 cut(s) 70, 336, 1384
EaeI YGGCCR 1 cut(s) 1482
Eam1104I CTCTTC 2 cut(s) 1211, 1576
EarI CTCTTC 2 cut(s) 1211, 1576
Eco130I CCWWGG 2 cut(s) 935, 1060
Eco47I GGWCC 3 cut(s) 152, 175, 1057
Eco57I CTGAAG 1 cut(s) 663
Eco72I CACGTG 1 cut(s) 728
Eco91I GGTNACC 1 cut(s) 683
EcoO65I GGTNACC 1 cut(s) 683
EcoRII CCWGG 2 cut(s) 123, 1288
EcoT14I CCWWGG 2 cut(s) 935, 1060
EcoT22I ATGCAT 1 cut(s) 1378
ErhI CCWWGG 2 cut(s) 935, 1060
FaeI CATG 9 cut(s) 248, 358, 401, 426, 806, 1057, 1585, 1597, 1676
FalI AAGNNNNNCTT 2 cut(s) 1622, 1654
FaqI GGGAC 1 cut(s) 365
FatI CATG 9 cut(s) 244, 354, 397, 422, 802, 1053, 1581, 1593, 1672
FbaI TGATCA 2 cut(s) 700, 1030
FblI GTMKAC 1 cut(s) 618
Fnu4HI GCNGC 1 cut(s) 591
FokI GGATG 5 cut(s) 119, 125, 506, 551, 824
Fsp4HI GCNGC 1 cut(s) 591
FspBI CTAG 6 cut(s) 50, 261, 636, 848, 1086, 1140
GluI GCNGC 1 cut(s) 591
HaeIII GGCC 2 cut(s) 128, 1484
HapII CCGG 2 cut(s) 831, 879
Hin1II CATG 9 cut(s) 248, 358, 401, 426, 806, 1057, 1585, 1597, 1676
HinfI GANTC 6 cut(s) 37, 496, 1274, 1366, 1490, 1676
HpaII CCGG 2 cut(s) 831, 879
HphI GGTGA 2 cut(s) 46, 695
Hpy166II GTNNAC 2 cut(s) 619, 1011
Hpy188I TCNGA 6 cut(s) 169, 363, 1078, 1101, 1505, 1527
Hpy188III TCNNGA 6 cut(s) 436, 555, 636, 1246, 1673, 1680
Hpy8I GTNNAC 2 cut(s) 619, 1011
HpyAV CCTTC 7 cut(s) 136, 230, 339, 533, 1243, 1471, 1675
HpyCH4III ACNGT 2 cut(s) 46, 292
HpyCH4IV ACGT 3 cut(s) 727, 772, 1194
HpyCH4V TGCA 7 cut(s) 116, 593, 991, 1048, 1376, 1581, 1706
HpyF10VI GCNNNNNNNGC 2 cut(s) 487, 997
HpyF3I CTNAG 3 cut(s) 1093, 1125, 1449
HpySE526I ACGT 3 cut(s) 727, 772, 1194
Hsp92II CATG 9 cut(s) 248, 358, 401, 426, 806, 1057, 1585, 1597, 1676
KpnI GGTACC 1 cut(s) 326
Ksp22I TGATCA 2 cut(s) 700, 1030
Kzo9I GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
LmnI GCTCC 2 cut(s) 982, 1759
Lsp1109I GCAGC 1 cut(s) 577
LweI GCATC 6 cut(s) 103, 529, 602, 1035, 1385, 1404
MaeI CTAG 6 cut(s) 50, 261, 636, 848, 1086, 1140
MaeII ACGT 3 cut(s) 727, 772, 1194
MaeIII GTNAC 3 cut(s) 683, 793, 907
MalI GATC 7 cut(s) 250, 702, 946, 1032, 1626, 1656, 1699
MboI GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
MfeI CAATTG 2 cut(s) 1034, 1742
MflI RGATCY 1 cut(s) 1654
MhlI GDGCHC 1 cut(s) 443
MlsI TGGCCA 1 cut(s) 1484
MluNI TGGCCA 1 cut(s) 1484
MlyI GAGTC 3 cut(s) 490, 1360, 1499
MmeI TCCRAC 4 cut(s) 179, 190, 394, 877
Mox20I TGGCCA 1 cut(s) 1484
Mph1103I ATGCAT 1 cut(s) 1378
MroXI GAANNNNTTC 3 cut(s) 368, 431, 748
MscI TGGCCA 1 cut(s) 1484
MseI TTAA 9 cut(s) 69, 335, 446, 560, 1004, 1040, 1191, 1383, 1616
MslI CAYNNNNRTG 1 cut(s) 537
Msp20I TGGCCA 1 cut(s) 1484
MspI CCGG 2 cut(s) 831, 879
MspR9I CCNGG 2 cut(s) 125, 1290
MunI CAATTG 2 cut(s) 1034, 1742
Mva1269I GAATGC 2 cut(s) 92, 368
MvaI CCWGG 2 cut(s) 125, 1290
MwoI GCNNNNNNNGC 2 cut(s) 487, 997
NdeII GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
NlaIII CATG 9 cut(s) 248, 358, 401, 426, 806, 1057, 1585, 1597, 1676
NlaIV GGNNCC 4 cut(s) 324, 1323, 1563, 1656
NmuCI GTSAC 3 cut(s) 683, 793, 907
NsiI ATGCAT 1 cut(s) 1378
NspI RCATGY 2 cut(s) 401, 806
PagI TCATGA 1 cut(s) 1672
PciI ACATGT 1 cut(s) 802
PctI GAATGC 2 cut(s) 92, 368
PdmI GAANNNNTTC 3 cut(s) 368, 431, 748
PfeI GAWTC 3 cut(s) 37, 1274, 1676
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 506
PkrI GCNGC 1 cut(s) 592
PleI GAGTC 3 cut(s) 490, 1360, 1498
PmaCI CACGTG 1 cut(s) 728
PmlI CACGTG 1 cut(s) 728
PpsI GAGTC 3 cut(s) 490, 1360, 1498
Ppu21I YACGTR 1 cut(s) 728
PscI ACATGT 1 cut(s) 802
PshAI GACNNNNGTC 1 cut(s) 22
Psp6I CCWGG 2 cut(s) 123, 1288
PspCI CACGTG 1 cut(s) 728
PspEI GGTNACC 1 cut(s) 683
PspGI CCWGG 2 cut(s) 123, 1288
PspN4I GGNNCC 4 cut(s) 324, 1323, 1563, 1656
PspPI GGNCC 3 cut(s) 152, 175, 1057
PsuI RGATCY 1 cut(s) 1654
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 5 cut(s) 324, 923, 1203, 1225, 1409
RsaNI GTAC 5 cut(s) 323, 922, 1202, 1224, 1408
RseI CAYNNNNRTG 1 cut(s) 537
SaqAI TTAA 9 cut(s) 69, 335, 446, 560, 1004, 1040, 1191, 1383, 1616
SatI GCNGC 1 cut(s) 591
Sau3AI GATC 7 cut(s) 248, 700, 944, 1030, 1624, 1654, 1697
Sau96I GGNCC 3 cut(s) 152, 175, 1057
ScaI AGTACT 1 cut(s) 1225
SchI GAGTC 3 cut(s) 490, 1360, 1499
ScrFI CCNGG 2 cut(s) 125, 1290
SduI GDGCHC 1 cut(s) 443
SfaNI GCATC 6 cut(s) 103, 529, 602, 1035, 1385, 1404
SinI GGWCC 3 cut(s) 152, 175, 1057
SmiMI CAYNNNNRTG 1 cut(s) 537
SsiI CCGC 4 cut(s) 189, 320, 575, 1652
SspI AATATT 1 cut(s) 875
SspMI CTAG 6 cut(s) 50, 261, 636, 848, 1086, 1140
StyD4I CCNGG 2 cut(s) 123, 1288
StyI CCWWGG 2 cut(s) 935, 1060
TaaI ACNGT 2 cut(s) 46, 292
TaiI ACGT 3 cut(s) 730, 775, 1197
TaqI TCGA 4 cut(s) 556, 628, 943, 1556
TatI WGTACW 4 cut(s) 921, 1201, 1223, 1407
TfiI GAWTC 3 cut(s) 37, 1274, 1676
Tru1I TTAA 9 cut(s) 69, 335, 446, 560, 1004, 1040, 1191, 1383, 1616
Tru9I TTAA 9 cut(s) 69, 335, 446, 560, 1004, 1040, 1191, 1383, 1616
TscAI CASTG 3 cut(s) 295, 415, 768
TseFI GTSAC 3 cut(s) 683, 793, 907
TseI GCWGC 1 cut(s) 590
Tsp45I GTSAC 3 cut(s) 683, 793, 907
TspGWI ACGGA 1 cut(s) 119
TspRI CASTG 3 cut(s) 295, 415, 768
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 1 cut(s) 506
VpaK11BI GGWCC 3 cut(s) 152, 175, 1057
XapI RAATTY 4 cut(s) 253, 467, 569, 1547
XbaI TCTAGA 1 cut(s) 635
XceI RCATGY 2 cut(s) 401, 806
XmiI GTMKAC 1 cut(s) 618
XmnI GAANNNNTTC 3 cut(s) 368, 431, 748
XspI CTAG 6 cut(s) 50, 261, 636, 848, 1086, 1140
ZrmI AGTACT 1 cut(s) 1225
Zsp2I ATGCAT 1 cut(s) 1378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.