RchiOBHm_Chr4g0390571

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000321
Physical Location & Seq
Forward (+)
5862409 .. 5866161
3753 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36356

Sequence Viewer

Length: 1791 bp
ATGTCTAGGAAAGGCTATGCTAATTTGGAAGAGGAACTAAAAATGGAGTTAGGGACTAAAGACGATATTGATAGAGCCATCTTATGGAAGAAAGGGCGTGTCGATAAAGAGGGTAACTATTTGAGTGAGACAACCAAACAACGTGCTGACAAAATTGATGCTTTAACGAAAGATGTGAGGGAGGGAATTGTGTCTGCTGTTGGTAGGAACGACATTTTAACTCAAGCTTTGGAGACACCTGAGCAATCGGGCCGTGTAAGAGGTGCTGGACAATTTGTTACACATAAGGTGTACTTTAATACATCTAGATATAAGTCTGCAACCAAGACACAACTGTTGGAACAGCAGTTGGAATTGATGCAAAACCAGATCAACATGTTTGCTTCATTATTGGATCCCGAGAAGTTGGATCCAATTAAACTAGGCATGATTCGAGACATGTTCAGATGTAATAATGGATCTGAAAAAGCTAGTTGCTCAGTCGACAAGGAGAAAAATCTGTCTTCTAAGGAGGAAGTATCTAAGGTGGCATCTGAGAAAGAAAAAGAGAAAAAAGCTACCGCCAAAAAGGTTCGAAAATGGGATGATACTCCATCTCCAATTGATAGCAGTAGAGAGAGCAAGAAGGCAAAACAATTGTATAAAGGGGGACTAATGATGAGACAGAGAGGAGCATTGGAAGATGACAATGTGATAACATCAACAGATAAAGCATATATTCCTATTGAGACAGCAAATGTTGTAAAAAAGGGGAAAAAATGCAAGCTAGCAGTAGACACCAAAGATAACATTGTTGCAATGGGAACTGTAATAATGTTGGATGGGCTGATACATGGAGTGCCCCTAGGAGCAGAAAATATATATATCTCAATTGATGTGCCCATCAAGGAAGATGCTAATCTCCCCATCCCAAATGAGTCAGCTGAAATTTTTACAGTAAAGCAAGCTACCGGTACTCATGTCGCTTGGCCTCGACATCTTGTTTTAATGTCACATGAAGAGAACTCAATGAGCACTTGGAAGTCTTCGAGTAAAACACCATGCAAACAAGCAGCATACAAGATGCCTGTGTCCGTGCATCTTCTACTGCGTTTGGTAAGAACAATGGATGAATCTATAGCAGTGTCAGTCCCAATGGAAGAAGGTGTGTTTGGCAATGACCACAATACATTCATAAACGGTAACGACATCATCCAGTTTTGTTCGATGCAGCCAATATCCACTATTTGCATTTCTATCTACATGAGACACCTCTGGTCATTGTTGAAAATGAGGAATGAGGATCACTTGTATGCATTTGTGGATCCTGGCCGCATCTCTAATGAAGCTAGAAAGGTTGAGGCTAGATCATGTGCGCTATCACTGAGATTAGAATCTGCCAAATTAGATCAGTTAATTCTTGCTTCTTATAATACAGGGAATCATTGGTTATTGGCTGCTATTAACACGTTTACTACATTGGTGTATTACTTCGACCCATTGAGTAACATTAACATCAATCCAGGCATGAAGAACATTATAGAGCTTTCCATTAAGATGTTTAATGCTCAAAAGGGAAGAAAGTCTCGTAAACCAGTTCATTGGGAGGTGGTTAAGTGTCCTAGACAACCTGGATCTGTGGAATGTGGATATTATGTTATGAAGTACATGAAAGAAATTATTGGAACTCCAAGCAGCTCAATTTTAAATATGTTCGAGGGAAAAGAGACTTACACTCAAGAAGAGATTGATGTAGTTCGAATAGAATGGGCGGAGCAGGTTGATGGATATATTGAAGATGAAGTAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

596

Amino Acids

67.31

Weight (kDa)

8.32

Isoelectric Point (pI)

39.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8039 PF26133 248 - 330 1.6e-13 Domain of unknown function (DUF8039)
Peptidase_C48 PF02902 470 - 592 4e-12 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
Acc36I ACCTGC 1 cut(s) 1747
AccB7I CCANNNNNTGG 1 cut(s) 84
AccI GTMKAC 2 cut(s) 483, 774
AciI CCGC 3 cut(s) 561, 1312, 1751
AclWI GGATC 9 cut(s) 389, 402, 404, 417, 466, 1290, 1298, 1311, 1621
AcoI YGGCCR 1 cut(s) 1309
AcsI RAATTY 1 cut(s) 927
AfaI GTAC 3 cut(s) 293, 955, 1646
AfiI CCNNNNNNNGG 1 cut(s) 84
AflIII ACRYGT 3 cut(s) 375, 438, 1446
AgeI ACCGGT 1 cut(s) 950
AgsI TTSAA 2 cut(s) 1267, 1775
AjnI CCWGG 3 cut(s) 1306, 1501, 1609
AjuI GAANNNNNNNTTGG 2 cut(s) 1134, 1166
AluBI AGCT 9 cut(s) 227, 470, 557, 766, 923, 947, 1328, 1525, 1677
AluI AGCT 9 cut(s) 227, 470, 557, 766, 923, 947, 1328, 1525, 1677
Alw21I GWGCWC 1 cut(s) 1016
Alw26I GTCTC 8 cut(s) 122, 227, 429, 655, 722, 1240, 1569, 1700
AlwI GGATC 9 cut(s) 389, 402, 404, 417, 466, 1290, 1298, 1311, 1621
Ama87I CYCGRG 1 cut(s) 398
AoxI GGCC 3 cut(s) 250, 968, 1309
ApeKI GCWGC 4 cut(s) 1052, 1210, 1436, 1674
ApoI RAATTY 1 cut(s) 927
AsiGI ACCGGT 1 cut(s) 950
AspA2I CCTAGG 1 cut(s) 844
AspLEI GCGC 1 cut(s) 1357
AspS9I GGNCC 1 cut(s) 250
AsuII TTCGAA 2 cut(s) 574, 1738
AsuNHI GCTAGC 1 cut(s) 766
AvaI CYCGRG 1 cut(s) 398
AvrII CCTAGG 1 cut(s) 844
BaeGI GKGCMC 2 cut(s) 843, 882
BaeI ACNNNNGTAYC 2 cut(s) 945, 978
BamHI GGATCC 3 cut(s) 394, 409, 1303
BbsI GAAGAC 2 cut(s) 495, 1017
Bbv12I GWGCWC 1 cut(s) 1016
BbvI GCAGC 4 cut(s) 1064, 1222, 1423, 1686
BccI CCATC 6 cut(s) 86, 601, 815, 890, 914, 1757
BceAI ACGGC 1 cut(s) 237
BciT130I CCWGG 3 cut(s) 1308, 1503, 1611
BcoDI GTCTC 8 cut(s) 122, 227, 429, 655, 722, 1240, 1569, 1700
BfaI CTAG 9 cut(s) 6, 306, 422, 471, 767, 845, 1329, 1344, 1602
BfmI CTRYAG 1 cut(s) 1116
BfuAI ACCTGC 1 cut(s) 1747
BisI GCNGC 5 cut(s) 1053, 1211, 1312, 1437, 1675
BlnI CCTAGG 1 cut(s) 844
BlsI GCNGC 5 cut(s) 1054, 1212, 1313, 1438, 1676
Bme1390I CCNGG 3 cut(s) 1308, 1503, 1611
BmeT110I CYCGRG 1 cut(s) 398
BmgT120I GGNCC 1 cut(s) 250
BmiI GGNNCC 3 cut(s) 396, 411, 1305
BmrFI CCNGG 3 cut(s) 1308, 1503, 1611
BmsI GCATC 8 cut(s) 148, 348, 539, 883, 1053, 1087, 1197, 1323
BmtI GCTAGC 1 cut(s) 770
BpiI GAAGAC 2 cut(s) 495, 1017
Bpu10I CCTNAGC 1 cut(s) 240
Bpu14I TTCGAA 2 cut(s) 574, 1738
BpuEI CTTGAG 2 cut(s) 207, 1701
BsaBI GATNNNNATC 2 cut(s) 897, 1372
BsaJI CCNNGG 1 cut(s) 844
BsaWI WCCGGW 1 cut(s) 950
BsaXI ACNNNNNCTCC 2 cut(s) 580, 610
Bsc4I CCNNNNNNNGG 1 cut(s) 84
Bse118I RCCGGY 1 cut(s) 950
Bse1I ACTGG 2 cut(s) 1195, 1574
Bse3DI GCAATG 2 cut(s) 804, 1162
Bse8I GATNNNNATC 2 cut(s) 897, 1372
BseBI CCWGG 3 cut(s) 1308, 1503, 1611
BseDI CCNNGG 1 cut(s) 844
BseGI GGATG 5 cut(s) 589, 826, 906, 1114, 1191
BseJI GATNNNNATC 2 cut(s) 897, 1372
BseLI CCNNNNNNNGG 1 cut(s) 84
BseMI GCAATG 2 cut(s) 804, 1162
BseMII CTCAG 4 cut(s) 231, 492, 525, 1355
BseNI ACTGG 2 cut(s) 1195, 1574
BseRI GAGGAG 1 cut(s) 684
BseSI GKGCMC 2 cut(s) 843, 882
BseXI GCAGC 4 cut(s) 1064, 1222, 1423, 1686
BshFI GGCC 3 cut(s) 252, 970, 1311
BshTI ACCGGT 1 cut(s) 950
BsiHKAI GWGCWC 1 cut(s) 1016
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 1 cut(s) 951
BslFI GGGAC 3 cut(s) 67, 663, 1115
BslI CCNNNNNNNGG 1 cut(s) 84
BsmAI GTCTC 8 cut(s) 122, 227, 429, 655, 722, 1240, 1569, 1700
BsmFI GGGAC 3 cut(s) 67, 663, 1115
BsnI GGCC 3 cut(s) 252, 970, 1311
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 2 cut(s) 574, 1738
Bsp1286I GDGCHC 3 cut(s) 843, 882, 1016
Bsp143I GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
BspACI CCGC 3 cut(s) 561, 1312, 1751
BspANI GGCC 3 cut(s) 252, 970, 1311
BspCNI CTCAG 4 cut(s) 232, 491, 526, 1356
BspLI GGNNCC 3 cut(s) 396, 411, 1305
BspMI ACCTGC 1 cut(s) 1747
BspOI GCTAGC 1 cut(s) 770
BspPI GGATC 9 cut(s) 389, 402, 404, 417, 466, 1290, 1298, 1311, 1621
BspT104I TTCGAA 2 cut(s) 574, 1738
BsrDI GCAATG 2 cut(s) 804, 1162
BsrFI RCCGGY 1 cut(s) 950
BsrI ACTGG 2 cut(s) 1195, 1574
BssAI RCCGGY 1 cut(s) 950
BssECI CCNNGG 1 cut(s) 844
BssMI GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
BssT1I CCWWGG 1 cut(s) 844
Bst2UI CCWGG 3 cut(s) 1308, 1503, 1611
Bst4CI ACNGT 4 cut(s) 336, 808, 937, 1181
Bst6I CTCTTC 3 cut(s) 24, 993, 1716
BstBI TTCGAA 2 cut(s) 574, 1738
BstC8I GCNNGC 3 cut(s) 764, 768, 945
BstDEI CTNAG 6 cut(s) 240, 478, 507, 522, 534, 1364
BstF5I GGATG 5 cut(s) 589, 826, 906, 1114, 1191
BstHHI GCGC 1 cut(s) 1357
BstKTI GATC 9 cut(s) 372, 397, 412, 461, 1285, 1306, 1349, 1390, 1616
BstMAI GTCTC 8 cut(s) 122, 227, 429, 655, 722, 1240, 1569, 1700
BstMBI GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
BstNI CCWGG 3 cut(s) 1308, 1503, 1611
BstNSI RCATGY 2 cut(s) 379, 442
BstSCI CCNGG 3 cut(s) 1306, 1501, 1609
BstSFI CTRYAG 1 cut(s) 1116
BstSLI GKGCMC 2 cut(s) 843, 882
BstV1I GCAGC 4 cut(s) 1064, 1222, 1423, 1686
BstV2I GAAGAC 2 cut(s) 495, 1017
BstX2I RGATCY 5 cut(s) 394, 409, 458, 1303, 1613
BstXI CCANNNNNNTGG 1 cut(s) 1581
BstYI RGATCY 5 cut(s) 394, 409, 458, 1303, 1613
BsuRI GGCC 3 cut(s) 252, 970, 1311
BtsCI GGATG 5 cut(s) 589, 826, 906, 1114, 1191
BtsI GCAGTG 1 cut(s) 1128
BtsIMutI CAGTG 2 cut(s) 1128, 1361
BveI ACCTGC 1 cut(s) 1747
Cac8I GCNNGC 3 cut(s) 764, 768, 945
CfoI GCGC 1 cut(s) 1357
Cfr10I RCCGGY 1 cut(s) 950
Cfr13I GGNCC 1 cut(s) 250
Csp6I GTAC 3 cut(s) 292, 954, 1645
CspAI ACCGGT 1 cut(s) 950
CviQI GTAC 3 cut(s) 292, 954, 1645
DdeI CTNAG 6 cut(s) 240, 478, 507, 522, 534, 1364
DpnI GATC 9 cut(s) 371, 396, 411, 460, 1284, 1305, 1348, 1389, 1615
DpnII GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
DraI TTTAAA 1 cut(s) 1686
EaeI YGGCCR 1 cut(s) 1309
Eam1104I CTCTTC 3 cut(s) 24, 993, 1716
EarI CTCTTC 3 cut(s) 24, 993, 1716
EciI GGCGGA 1 cut(s) 1766
Eco130I CCWWGG 1 cut(s) 844
Eco88I CYCGRG 1 cut(s) 398
EcoRII CCWGG 3 cut(s) 1306, 1501, 1609
EcoT14I CCWWGG 1 cut(s) 844
EcoT22I ATGCAT 1 cut(s) 1297
ErhI CCWWGG 1 cut(s) 844
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FaqI GGGAC 3 cut(s) 67, 663, 1115
FblI GTMKAC 2 cut(s) 483, 774
Fnu4HI GCNGC 5 cut(s) 1053, 1211, 1312, 1437, 1675
FokI GGATG 5 cut(s) 596, 833, 893, 1121, 1178
Fsp4HI GCNGC 5 cut(s) 1053, 1211, 1312, 1437, 1675
FspBI CTAG 9 cut(s) 6, 306, 422, 471, 767, 845, 1329, 1344, 1602
GlaI GCGC 1 cut(s) 1356
GluI GCNGC 5 cut(s) 1053, 1211, 1312, 1437, 1675
HaeIII GGCC 3 cut(s) 252, 970, 1311
HapII CCGG 1 cut(s) 951
HhaI GCGC 1 cut(s) 1357
Hin6I GCGC 1 cut(s) 1355
HinP1I GCGC 1 cut(s) 1355
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HindIII AAGCTT 1 cut(s) 225
HinfI GANTC 5 cut(s) 430, 917, 1112, 1373, 1420
HpaII CCGG 1 cut(s) 951
Hpy166II GTNNAC 5 cut(s) 292, 484, 775, 1452, 1571
Hpy188I TCNGA 3 cut(s) 446, 463, 535
Hpy188III TCNNGA 4 cut(s) 306, 398, 434, 1718
Hpy8I GTNNAC 5 cut(s) 292, 484, 775, 1452, 1571
HpyAV CCTTC 2 cut(s) 619, 1136
HpyCH4III ACNGT 4 cut(s) 336, 808, 937, 1181
HpyCH4IV ACGT 2 cut(s) 142, 1448
HpyCH4V TGCA 9 cut(s) 320, 361, 762, 797, 1044, 1078, 1210, 1230, 1295
HpyF3I CTNAG 6 cut(s) 240, 478, 507, 522, 534, 1364
HpySE526I ACGT 2 cut(s) 142, 1448
HspAI GCGC 1 cut(s) 1355
Kzo9I GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
LmnI GCTCC 3 cut(s) 671, 848, 1753
Lsp1109I GCAGC 4 cut(s) 1064, 1222, 1423, 1686
LweI GCATC 8 cut(s) 148, 348, 539, 883, 1053, 1087, 1197, 1323
MaeI CTAG 9 cut(s) 6, 306, 422, 471, 767, 845, 1329, 1344, 1602
MaeII ACGT 2 cut(s) 142, 1448
MaeIII GTNAC 5 cut(s) 113, 277, 990, 1181, 1484
MalI GATC 9 cut(s) 371, 396, 411, 460, 1284, 1305, 1348, 1389, 1615
MboI GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
MfeI CAATTG 3 cut(s) 600, 635, 870
MflI RGATCY 5 cut(s) 394, 409, 458, 1303, 1613
MhlI GDGCHC 3 cut(s) 843, 882, 1016
MlyI GAGTC 1 cut(s) 926
MmeI TCCRAC 4 cut(s) 318, 330, 387, 798
Mph1103I ATGCAT 1 cut(s) 1297
MslI CAYNNNNRTG 2 cut(s) 1290, 1535
MspA1I CMGCKG 1 cut(s) 923
MspI CCGG 1 cut(s) 951
MspR9I CCNGG 3 cut(s) 1308, 1503, 1611
MunI CAATTG 3 cut(s) 600, 635, 870
MvaI CCWGG 3 cut(s) 1308, 1503, 1611
NdeII GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
NheI GCTAGC 1 cut(s) 766
NlaIV GGNNCC 3 cut(s) 396, 411, 1305
NmuCI GTSAC 1 cut(s) 990
NsiI ATGCAT 1 cut(s) 1297
NspI RCATGY 2 cut(s) 379, 442
NspV TTCGAA 2 cut(s) 574, 1738
PciI ACATGT 2 cut(s) 375, 438
PfeI GAWTC 4 cut(s) 430, 1112, 1373, 1420
PflMI CCANNNNNTGG 1 cut(s) 84
PinAI ACCGGT 1 cut(s) 950
PkrI GCNGC 5 cut(s) 1054, 1212, 1313, 1438, 1676
PleI GAGTC 1 cut(s) 925
PpsI GAGTC 1 cut(s) 925
PscI ACATGT 2 cut(s) 375, 438
PsiI TTATAA 1 cut(s) 1410
Psp6I CCWGG 3 cut(s) 1306, 1501, 1609
PspGI CCWGG 3 cut(s) 1306, 1501, 1609
PspN4I GGNNCC 3 cut(s) 396, 411, 1305
PspPI GGNCC 1 cut(s) 250
PsuI RGATCY 5 cut(s) 394, 409, 458, 1303, 1613
PvuII CAGCTG 1 cut(s) 923
RsaI GTAC 3 cut(s) 293, 955, 1646
RsaNI GTAC 3 cut(s) 292, 954, 1645
RseI CAYNNNNRTG 2 cut(s) 1290, 1535
SalI GTCGAC 1 cut(s) 482
SatI GCNGC 5 cut(s) 1053, 1211, 1312, 1437, 1675
Sau3AI GATC 9 cut(s) 369, 394, 409, 458, 1282, 1303, 1346, 1387, 1613
Sau96I GGNCC 1 cut(s) 250
SchI GAGTC 1 cut(s) 926
ScrFI CCNGG 3 cut(s) 1308, 1503, 1611
SduI GDGCHC 3 cut(s) 843, 882, 1016
SfaNI GCATC 8 cut(s) 148, 348, 539, 883, 1053, 1087, 1197, 1323
SfcI CTRYAG 1 cut(s) 1116
SfuI TTCGAA 2 cut(s) 574, 1738
SmiMI CAYNNNNRTG 2 cut(s) 1290, 1535
SmlI CTYRAG 2 cut(s) 222, 1716
SmoI CTYRAG 2 cut(s) 222, 1716
SsiI CCGC 3 cut(s) 561, 1312, 1751
SspMI CTAG 9 cut(s) 6, 306, 422, 471, 767, 845, 1329, 1344, 1602
StyD4I CCNGG 3 cut(s) 1306, 1501, 1609
StyI CCWWGG 1 cut(s) 844
TaaI ACNGT 4 cut(s) 336, 808, 937, 1181
TaiI ACGT 2 cut(s) 145, 1451
TatI WGTACW 2 cut(s) 291, 1644
TauI GCSGC 1 cut(s) 1314
TfiI GAWTC 4 cut(s) 430, 1112, 1373, 1420
TscAI CASTG 2 cut(s) 1128, 1368
TseFI GTSAC 1 cut(s) 990
TseI GCWGC 4 cut(s) 1052, 1210, 1436, 1674
Tsp45I GTSAC 1 cut(s) 990
TspDTI ATGAA 9 cut(s) 375, 1011, 1125, 1162, 1338, 1523, 1568, 1655, 1664
TspGWI ACGGA 1 cut(s) 1063
TspRI CASTG 2 cut(s) 1128, 1368
Van91I CCANNNNNTGG 1 cut(s) 84
XapI RAATTY 1 cut(s) 927
XbaI TCTAGA 1 cut(s) 305
XceI RCATGY 2 cut(s) 379, 442
XmaJI CCTAGG 1 cut(s) 844
XmiI GTMKAC 2 cut(s) 483, 774
XspI CTAG 9 cut(s) 6, 306, 422, 471, 767, 845, 1329, 1344, 1602
Zsp2I ATGCAT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.