RchiOBHm_Chr1g0318231

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000321
Physical Location & Seq
Forward (+)
5670502 .. 5681128
10627 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54852

Sequence Viewer

Length: 1596 bp
ATGGATCCAGAAGAAGAAAATCATGCTTCTGAAGATGACTTGTCATCTGATGAGAAGAAGGGAAGAGGTCCAACTTTTATGTCTGACATTATTCATGGCAGGAGTAAGGGGGCTAGAATGGAAGTGACATATAACAAAAAGGGGCAACCAATTGGTCTTGGAGGGAAGAGGCTAGCTACTTTTATTGGGGTAATGGCTCGAACTACTATCCCAATCACATATGAGACTTGGCCAGCTGTGAAGAAATCACTTAAAGAAATGATATGGAGTATGGTTCAGAAATCATTCATTGTGGATCCAAGAAGCAAGAAAGATGTATTGAGTAGTGCAGGAAGGAAATGGAAATCATTCAAGAGCACTTTAACAACAAAATATATATTGAAGTATAAAGATCGACGGAGCCTCCTAAAGAAAAAACCTGAAGAATATGAATTTATCACTCAACCTCAGTGGGAAGCTTTTGTGAAATCTCGATTAACTCCTGAATTTTTGGAAATTCATGAGGACCACTCAAGGAGACGAGCTTTTCATGAGTATGAGCATCGAATGTCCAGGAAAGGCTATGCTAATTTGGAAGAGGAGCTAAAACTGGAGTTAGGGACTGAAGAAGATATTGACAGAGCTATCTTATGGAAGAAAGGGCGTGTCGATAAAGAGGGTAACTATTTGAGTGAGACAACCAAACAACGTGCTGAGAAGATTGATGCTTTAACAAAAGATGTGAAAGAGGGAATTGTGTCTGCTGTTGGTCGGAACGACATTTTGACTCAAGCTTTGGAGACACCTGAGCGACCAGGTCGTGTAAGAGGTGCTGGACAATTTGTTACACACAAAGTGTACTTTAATACATCTAGATATAAGCCTGCAACCAAGACACAAATGTTGGAACAACAGTTGGAAATGATGCAAAACCAGATCAACATGTTTGCTTCATTATTGGATCCAGAGAAGTTGGATGCAGCTAAACTAAGCATGATGCGAGACATGTTCAAATCTAATAATGGATCTGAAAAAGCTAGCTGCTCAGTCGATAAGGAGAAAAATCAGTCTTGTAAGGAGGAGGTATCTAATGTGGCATCCAAGAAAGAAATTGAAAAAAAAGCTACTGAAAAAAAGGTTCGAAAAGTCGATGATATTCCATCTCCAATTGACAACAGTAGAGAGAGCAAGAAGGCAAAACAAAAATCCAAAGGGGGGCTAGTGACGAGAGAGATAGCCGCATTGGAAGATGACAATGTGATAACATCAACAGATAAAGCATATATTCCTATCCAGACAACAAATGTTGTAAAAAAGGCAAATAAATGCAAGCTAGCAGTAGACACCAAAGATAACATTGTTGCAATGGGAACTATAATAATGTTGGATGGGCCGATACATGGAGTGCCCCTAGGAGCAGAAAATGCACGTATCTCAGTTGATGTGCCTATCAAGGAAGATGCTTATCTCCCAATCCCAAATGTGTCAGGTGACATATTTACAGTAAAGCAAGCCATAGGGACTCATGTTGCTTGTCCTCGACATCTTGTTTTAATGTCACATGAAGAGAACTCAATGAGCACTCAGAAGTTTTCGAGTAAAACACCATGCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

531

Amino Acids

60.06

Weight (kDa)

9.26

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 150 - 277 2.1e-11 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 430 - 512 3e-11 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000321)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221 FvH4_1g20221
prunus_persica Prupe.6G157700_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1 Prupe.6G193600_v2.0.a1
pyrus_communis pycom03g09490 pycom03g19580 pycom07g21940 pycom07g27440 pycom14g09710
rosa_chinensis RchiOBHm_Chr1g0318231 RchiOBHm_Chr1g0318241 RchiOBHm_Chr1g0325001 RchiOBHm_Chr1g0325021 RchiOBHm_Chr2g0112301 RchiOBHm_Chr3g0482281 RchiOBHm_Chr3g0482291 RchiOBHm_Chr4g0390561 RchiOBHm_Chr4g0390571 RchiOBHm_Chr4g0417951 RchiOBHm_Chr7g0232611 RchiOBHm_Chr7g0240601
rosa_laevigata RLG00000001069 RLG00000013674 RLG00000018830 RLG00000020747
rosa_multiflora Rmu_co8364947.1_g000001 Rmu_co8416715.1_g000001 Rmu_sc0001348.1_g000014 Rmu_sc0002986.1_g000026 Rmu_sc0004003.1_g000007 Rmu_sc0005137.1_g000014 Rmu_sc0006583.1_g000016
rosa_roxburghii Rroxscaffold_159G00432800 Rroxscaffold_174G00435170 Rroxscaffold_1G00001870 Rroxscaffold_1G00044480 Rroxscaffold_2G00111880 Rroxscaffold_2G00111890 Rroxscaffold_2G00119670 Rroxscaffold_2G00129450 Rroxscaffold_2G00131520 Rroxscaffold_3G00240880 Rroxscaffold_5G00337440 Rroxscaffold_5G00356220 Rroxscaffold_5G00362390 Rroxscaffold_5G00368260 Rroxscaffold_7G00196230 Rroxscaffold_7G00196240 Rroxscaffold_7G00202020
rosa_rugosa Rorug01G0094700 Rorug02G0050500 Rorug02G0179800 Rorug05G0042800 Rorug05G0043000 Rorug05G0043100 Rorug05G0043200 Rorug06G0045300 Rorug06G0045600 Rorug06G0069400 Rorug07G0213000 Rorug07G0213000
rosa_samantha Rh1AG031600 Rh1DG131700 Rh1DG134800 Rh1DG288000 Rh1DG288100 Rh2AG218500 Rh2AG232500 Rh2BG245900 Rh2CG236700 Rh2DG224300 Rh2DG224400 Rh2DG240200 Rh3AG247300 Rh3BG126600 Rh3BG126700 Rh3BG333600 Rh5AG440500 Rh5AG440600 Rh5BG457800 Rh5DG472700 Rh5DG472800 Rh6BG138000 Rh6BG138100 Rh6BG171500 Rh6BG188400 Rh6BG230000 Rh6CG135600 Rh6CG135700 Rh6CG186300 Rh6CG450300 Rh7AG376100 Rh7CG394800 Rh7CG426100 Rh7CG426200 Rh7DG247700 Rh7DG322600 Rh7DG334300 Rh7DG364700
rosa_wichuraiana Rw2G018040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1320
AciI CCGC 1 cut(s) 1218
AclWI GGATC 6 cut(s) 12, 290, 303, 935, 948, 1012
AcoI YGGCCR 1 cut(s) 230
AcsI RAATTY 3 cut(s) 431, 485, 495
AcuI CTGAAG 3 cut(s) 51, 441, 624
AdeI CACNNNGTG 1 cut(s) 835
AfaI GTAC 1 cut(s) 839
AfiI CCNNNNNNNGG 2 cut(s) 1194, 1379
AflIII ACRYGT 2 cut(s) 921, 984
AgsI TTSAA 4 cut(s) 352, 382, 991, 1094
AjnI CCWGG 2 cut(s) 551, 793
Alw21I GWGCWC 2 cut(s) 359, 1562
Alw26I GTCTC 5 cut(s) 218, 511, 668, 773, 975
AlwI GGATC 6 cut(s) 12, 290, 303, 935, 948, 1012
AoxI GGCC 2 cut(s) 230, 1370
ApeKI GCWGC 2 cut(s) 959, 1020
ApoI RAATTY 3 cut(s) 431, 485, 495
ArsI GACNNNNNNTTYG 2 cut(s) 757, 789
Asp700I GAANNNNTTC 2 cut(s) 284, 347
AspA2I CCTAGG 1 cut(s) 1390
AspS9I GGNCC 3 cut(s) 68, 505, 1370
AsuHPI GGTGA 1 cut(s) 1481
AsuII TTCGAA 1 cut(s) 1120
AsuNHI GCTAGC 3 cut(s) 172, 1016, 1312
AvaII GGWCC 2 cut(s) 68, 505
AvrII CCTAGG 1 cut(s) 1390
BaeGI GKGCMC 1 cut(s) 1389
BalI TGGCCA 1 cut(s) 232
BamHI GGATCC 3 cut(s) 4, 295, 940
Bbv12I GWGCWC 2 cut(s) 359, 1562
BbvI GCAGC 2 cut(s) 971, 1007
BccI CCATC 2 cut(s) 1147, 1361
BciT130I CCWGG 2 cut(s) 553, 795
BcoDI GTCTC 5 cut(s) 218, 511, 668, 773, 975
BfaI CTAG 7 cut(s) 114, 173, 852, 1017, 1199, 1313, 1391
BisI GCNGC 3 cut(s) 960, 1021, 1218
BlnI CCTAGG 1 cut(s) 1390
BlsI GCNGC 3 cut(s) 961, 1022, 1219
Bme1390I CCNGG 2 cut(s) 553, 795
Bme18I GGWCC 2 cut(s) 68, 505
BmgT120I GGNCC 3 cut(s) 68, 505, 1370
BmiI GGNNCC 4 cut(s) 6, 297, 401, 942
BmrFI CCNGG 2 cut(s) 553, 795
BmsI GCATC 7 cut(s) 550, 694, 894, 946, 966, 1085, 1429
BmtI GCTAGC 3 cut(s) 176, 1020, 1316
BplI GAGNNNNNCTC 2 cut(s) 494, 526
BpmI CTGGAG 1 cut(s) 611
Bpu10I CCTNAGC 1 cut(s) 786
Bpu14I TTCGAA 1 cut(s) 1120
BpuEI CTTGAG 2 cut(s) 496, 753
BsaAI YACGTR 1 cut(s) 1409
BsaBI GATNNNNATC 1 cut(s) 1443
BsaJI CCNNGG 1 cut(s) 1390
BsaXI ACNNNNNCTCC 2 cut(s) 387, 417
Bsc4I CCNNNNNNNGG 2 cut(s) 1194, 1379
Bse1I ACTGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 1350
Bse8I GATNNNNATC 1 cut(s) 1443
BseBI CCWGG 2 cut(s) 553, 795
BseDI CCNNGG 1 cut(s) 1390
BseGI GGATG 3 cut(s) 961, 1076, 1372
BseJI GATNNNNATC 1 cut(s) 1443
BseLI CCNNNNNNNGG 2 cut(s) 1194, 1379
BseMI GCAATG 1 cut(s) 1350
BseMII CTCAG 6 cut(s) 461, 684, 777, 1038, 1428, 1577
BseNI ACTGG 1 cut(s) 594
BseRI GAGGAG 2 cut(s) 593, 1073
BseSI GKGCMC 1 cut(s) 1389
BseXI GCAGC 2 cut(s) 971, 1007
BsgI GTGCAG 1 cut(s) 348
BshFI GGCC 2 cut(s) 232, 1372
BsiHKAI GWGCWC 2 cut(s) 359, 1562
BslFI GGGAC 2 cut(s) 613, 1513
BslI CCNNNNNNNGG 2 cut(s) 1194, 1379
BsmAI GTCTC 5 cut(s) 218, 511, 668, 773, 975
BsmBI CGTCTC 1 cut(s) 511
BsmFI GGGAC 2 cut(s) 613, 1513
BsnI GGCC 2 cut(s) 232, 1372
Bsp119I TTCGAA 1 cut(s) 1120
Bsp1286I GDGCHC 3 cut(s) 359, 1389, 1562
Bsp143I GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
BspACI CCGC 1 cut(s) 1218
BspANI GGCC 2 cut(s) 232, 1372
BspCNI CTCAG 6 cut(s) 460, 685, 778, 1037, 1427, 1576
BspHI TCATGA 2 cut(s) 499, 529
BspLI GGNNCC 4 cut(s) 6, 297, 401, 942
BspOI GCTAGC 3 cut(s) 176, 1020, 1316
BspPI GGATC 6 cut(s) 12, 290, 303, 935, 948, 1012
BspT104I TTCGAA 1 cut(s) 1120
BsrDI GCAATG 1 cut(s) 1350
BsrI ACTGG 1 cut(s) 594
BssECI CCNNGG 1 cut(s) 1390
BssMI GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
BssT1I CCWWGG 1 cut(s) 1390
Bst2UI CCWGG 2 cut(s) 553, 795
Bst4CI ACNGT 3 cut(s) 894, 1157, 1483
Bst6I CTCTTC 4 cut(s) 58, 161, 570, 1539
BstAPI GCANNNNNTGC 1 cut(s) 1403
BstBAI YACGTR 1 cut(s) 1409
BstBI TTCGAA 1 cut(s) 1120
BstC8I GCNNGC 7 cut(s) 174, 234, 864, 1018, 1310, 1314, 1491
BstDEI CTNAG 7 cut(s) 447, 693, 786, 968, 1024, 1414, 1563
BstF5I GGATG 3 cut(s) 961, 1076, 1372
BstKTI GATC 6 cut(s) 7, 298, 394, 918, 943, 1007
BstMAI GTCTC 5 cut(s) 218, 511, 668, 773, 975
BstMBI GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
BstMWI GCNNNNNNNGC 1 cut(s) 1403
BstNI CCWGG 2 cut(s) 553, 795
BstNSI RCATGY 2 cut(s) 925, 988
BstSCI CCNGG 2 cut(s) 551, 793
BstSLI GKGCMC 1 cut(s) 1389
BstV1I GCAGC 2 cut(s) 971, 1007
BstX2I RGATCY 4 cut(s) 4, 295, 940, 1004
BstYI RGATCY 4 cut(s) 4, 295, 940, 1004
BsuRI GGCC 2 cut(s) 232, 1372
BtsCI GGATG 3 cut(s) 961, 1076, 1372
BtsIMutI CAGTG 1 cut(s) 455
Cac8I GCNNGC 7 cut(s) 174, 234, 864, 1018, 1310, 1314, 1491
CciI TCATGA 2 cut(s) 499, 529
Cfr13I GGNCC 3 cut(s) 68, 505, 1370
CsiI ACCWGGT 1 cut(s) 793
Csp6I GTAC 1 cut(s) 838
CspCI CAANNNNNGTGG 2 cut(s) 431, 466
CviQI GTAC 1 cut(s) 838
DdeI CTNAG 7 cut(s) 447, 693, 786, 968, 1024, 1414, 1563
DpnI GATC 6 cut(s) 6, 297, 393, 917, 942, 1006
DpnII GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
DraIII CACNNNGTG 1 cut(s) 835
EaeI YGGCCR 1 cut(s) 230
Eam1104I CTCTTC 4 cut(s) 58, 161, 570, 1539
EarI CTCTTC 4 cut(s) 58, 161, 570, 1539
Eco130I CCWWGG 1 cut(s) 1390
Eco47I GGWCC 2 cut(s) 68, 505
Eco57I CTGAAG 3 cut(s) 51, 441, 624
EcoRII CCWGG 2 cut(s) 551, 793
EcoT14I CCWWGG 1 cut(s) 1390
ErhI CCWWGG 1 cut(s) 1390
Esp3I CGTCTC 1 cut(s) 511
FaqI GGGAC 2 cut(s) 613, 1513
FauNDI CATATG 1 cut(s) 220
FblI GTMKAC 1 cut(s) 1320
Fnu4HI GCNGC 3 cut(s) 960, 1021, 1218
FokI GGATG 3 cut(s) 968, 1063, 1379
Fsp4HI GCNGC 3 cut(s) 960, 1021, 1218
FspBI CTAG 7 cut(s) 114, 173, 852, 1017, 1199, 1313, 1391
GluI GCNGC 3 cut(s) 960, 1021, 1218
GsuI CTGGAG 1 cut(s) 611
HaeIII GGCC 2 cut(s) 232, 1372
HindIII AAGCTT 2 cut(s) 456, 771
HinfI GANTC 2 cut(s) 766, 1501
HphI GGTGA 1 cut(s) 1481
Hpy166II GTNNAC 2 cut(s) 838, 1321
Hpy188I TCNGA 7 cut(s) 31, 49, 85, 279, 753, 1009, 1566
Hpy188III TCNNGA 9 cut(s) 8, 352, 471, 482, 500, 530, 852, 944, 1273
Hpy8I GTNNAC 2 cut(s) 838, 1321
Hpy99I CGWCG 1 cut(s) 399
HpyAV CCTTC 3 cut(s) 52, 327, 1165
HpyCH4III ACNGT 3 cut(s) 894, 1157, 1483
HpyCH4IV ACGT 2 cut(s) 688, 1408
HpyCH4V TGCA 8 cut(s) 329, 866, 907, 959, 1308, 1343, 1406, 1590
HpyF10VI GCNNNNNNNGC 1 cut(s) 1403
HpyF3I CTNAG 7 cut(s) 447, 693, 786, 968, 1024, 1414, 1563
HpySE526I ACGT 2 cut(s) 688, 1408
Kzo9I GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
LmnI GCTCC 3 cut(s) 399, 580, 1394
Lsp1109I GCAGC 2 cut(s) 971, 1007
LweI GCATC 7 cut(s) 550, 694, 894, 946, 966, 1085, 1429
MabI ACCWGGT 1 cut(s) 793
MaeI CTAG 7 cut(s) 114, 173, 852, 1017, 1199, 1313, 1391
MaeII ACGT 2 cut(s) 688, 1408
MaeIII GTNAC 6 cut(s) 124, 659, 823, 1201, 1469, 1536
MalI GATC 6 cut(s) 6, 297, 393, 917, 942, 1006
MboI GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
MfeI CAATTG 2 cut(s) 150, 1146
MflI RGATCY 4 cut(s) 4, 295, 940, 1004
MhlI GDGCHC 3 cut(s) 359, 1389, 1562
MlsI TGGCCA 1 cut(s) 232
MluCI AATT 9 cut(s) 150, 431, 485, 495, 568, 732, 818, 1089, 1146
MluNI TGGCCA 1 cut(s) 232
MlyI GAGTC 2 cut(s) 760, 1495
MmeI TCCRAC 6 cut(s) 95, 731, 864, 876, 933, 1344
Mox20I TGGCCA 1 cut(s) 232
MroXI GAANNNNTTC 2 cut(s) 284, 347
MscI TGGCCA 1 cut(s) 232
MseI TTAA 6 cut(s) 252, 362, 476, 710, 843, 1532
MslI CAYNNNNRTG 1 cut(s) 534
Msp20I TGGCCA 1 cut(s) 232
MspA1I CMGCKG 1 cut(s) 236
MspR9I CCNGG 2 cut(s) 553, 795
MunI CAATTG 2 cut(s) 150, 1146
MvaI CCWGG 2 cut(s) 553, 795
MwoI GCNNNNNNNGC 1 cut(s) 1403
NdeI CATATG 1 cut(s) 220
NdeII GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
NheI GCTAGC 3 cut(s) 172, 1016, 1312
NlaIV GGNNCC 4 cut(s) 6, 297, 401, 942
NmuCI GTSAC 4 cut(s) 124, 1201, 1469, 1536
NspI RCATGY 2 cut(s) 925, 988
NspV TTCGAA 1 cut(s) 1120
PagI TCATGA 2 cut(s) 499, 529
PciI ACATGT 2 cut(s) 921, 984
PdmI GAANNNNTTC 2 cut(s) 284, 347
PflFI GACNNNGTC 1 cut(s) 795
PfoI TCCNGGA 1 cut(s) 551
PkrI GCNGC 3 cut(s) 961, 1022, 1219
PleI GAGTC 2 cut(s) 760, 1495
PpsI GAGTC 2 cut(s) 760, 1495
Ppu21I YACGTR 1 cut(s) 1409
PscI ACATGT 2 cut(s) 921, 984
Psp6I CCWGG 2 cut(s) 551, 793
PspGI CCWGG 2 cut(s) 551, 793
PspN4I GGNNCC 4 cut(s) 6, 297, 401, 942
PspPI GGNCC 3 cut(s) 68, 505, 1370
PsuI RGATCY 4 cut(s) 4, 295, 940, 1004
PsyI GACNNNGTC 1 cut(s) 795
PvuII CAGCTG 1 cut(s) 236
RsaI GTAC 1 cut(s) 839
RsaNI GTAC 1 cut(s) 838
RseI CAYNNNNRTG 1 cut(s) 534
SaqAI TTAA 6 cut(s) 252, 362, 476, 710, 843, 1532
SatI GCNGC 3 cut(s) 960, 1021, 1218
Sau3AI GATC 6 cut(s) 4, 295, 391, 915, 940, 1004
Sau96I GGNCC 3 cut(s) 68, 505, 1370
SchI GAGTC 2 cut(s) 760, 1495
ScrFI CCNGG 2 cut(s) 553, 795
SduI GDGCHC 3 cut(s) 359, 1389, 1562
SexAI ACCWGGT 1 cut(s) 793
SfaNI GCATC 7 cut(s) 550, 694, 894, 946, 966, 1085, 1429
SfuI TTCGAA 1 cut(s) 1120
SinI GGWCC 2 cut(s) 68, 505
SmiMI CAYNNNNRTG 1 cut(s) 534
SmlI CTYRAG 2 cut(s) 511, 768
SmoI CTYRAG 2 cut(s) 511, 768
Sse9I AATT 9 cut(s) 150, 431, 485, 495, 568, 732, 818, 1089, 1146
SsiI CCGC 1 cut(s) 1218
SspMI CTAG 7 cut(s) 114, 173, 852, 1017, 1199, 1313, 1391
StyD4I CCNGG 2 cut(s) 551, 793
StyI CCWWGG 1 cut(s) 1390
TaaI ACNGT 3 cut(s) 894, 1157, 1483
TaiI ACGT 2 cut(s) 691, 1411
TasI AATT 9 cut(s) 150, 431, 485, 495, 568, 732, 818, 1089, 1146
TatI WGTACW 1 cut(s) 837
TauI GCSGC 1 cut(s) 1220
Tru1I TTAA 6 cut(s) 252, 362, 476, 710, 843, 1532
Tru9I TTAA 6 cut(s) 252, 362, 476, 710, 843, 1532
TscAI CASTG 1 cut(s) 455
TseFI GTSAC 4 cut(s) 124, 1201, 1469, 1536
TseI GCWGC 2 cut(s) 959, 1020
Tsp45I GTSAC 4 cut(s) 124, 1201, 1469, 1536
TspDTI ATGAA 7 cut(s) 83, 277, 444, 488, 518, 921, 1557
TspGWI ACGGA 1 cut(s) 412
TspRI CASTG 1 cut(s) 455
Tth111I GACNNNGTC 1 cut(s) 795
VpaK11BI GGWCC 2 cut(s) 68, 505
XapI RAATTY 3 cut(s) 431, 485, 495
XbaI TCTAGA 1 cut(s) 851
XceI RCATGY 2 cut(s) 925, 988
XmaJI CCTAGG 1 cut(s) 1390
XmiI GTMKAC 1 cut(s) 1320
XmnI GAANNNNTTC 2 cut(s) 284, 347
XspI CTAG 7 cut(s) 114, 173, 852, 1017, 1199, 1313, 1391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.