Rorug01G0192800
MYB Family

Myb/SANT-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000329
Physical Location & Seq
Reverse (-)
26765675 .. 26780758
15084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0192800.1

Sequence Viewer

Length: 2514 bp
ATGGAGTTTCAAGGGTTGAGGCAAGCAACGATCTTGTCCTTTGTGACCTTCTGTTGCCTCATTGGTCACTCAAGTGCTGACATTGAAAACTTAAACTATGATGTTCATTCTATTATTGCTGAAGATCAGGTTCATGTCGGTGTGATTCTCGATATGGAATCAAAGGAAGGAAAGATTGTTCTCAGCTGCATTTCAATGGCCCTCTCTGATTTTTACCATCTGCACAATAACTATAGCACAAGAATAGTTGTCTACAGTAAGGATTCCAAAGGTGAAACTCTTCTTGCTCTGTCAGCTGCTCTTAACTTTTTGGAAAACATCAAAGTGGAAGCAATAATCGGTGCACCAAAAAGAGAGGAAGCAAACCTTTTGGCAGAATTAGGAGAAGCGGCAAAACTCCCTGTAATGTCTCTTTCTCCTGCTCGGACTGACAATAGATATTCCTTCTTTGTTGAGATCGTGCGTGCTGATGTAGCGACTGAAGTTAAGGGAATTAGTGCCCTTATTGAAGTTTTCAAATGGAGGGAAGTTATCCTTTTAGATGATAGCAAAGAATATGAGAGAGGCTTCGTTCCATCATTAGTCAACTCCTTGCAAGAGACCACACATGGGAGTGTTGCGTACAAAAGTTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCACTGCAGAGCTCCAAAAGTTGATCAACCTGAAGGTTAAGGTATTTGTGGTGCATGTTTCACATTTTTTTGCGCCTCGTCTTTTCTTGAATGCAATGAAGTTAGGGATGATGAGCGAAGGGTATGCTTGGATCATGACATCAACTAGCATGAATTTTTTGCATTCTATGAATTTATCTGTTATTGAATCAATGCAAGGAGTGCTGGGTTTCAAGTCTTCTATTCCACCATCAGTGAGACTTCACAGTCTTACTTCAAGATTGAGGAGGAAGTTTAACCTGGAGGATCCCAATATGGAAGCAATTCGGGAGTTGAGTGCAGATGAAATCTGGGCATATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAAAGAGCAAGGCTTAAAAATTCTACAACTAAATCCTCCAAAGATGGAGCTGTGCTTCTTAAAGAGATATTGCAGATTGGATTTAAGGGTTTAAGTGGTGAAATTCAATATGTAGATGGGAGACTTATTCCATCAGAACCATTTGAGATAGTTAATGTTATTGGACAAGGTGACGTCAAACGAATTGGATTTTGGCCTTGCAAAGAAAAAGCAAAAACGAAGAAAGGGTCATCTCAGCAGCAGCTTAATCATAATGGGGGAAATTTAGCTTCCACGATTGATCTTGAAAGAATCATATGGCCTGGTGGTTCCAGGAGGAAACTGAGTAGTAGTAAAACACTTAAACTAAAAATTGGTGTTCCAGTGAAATATGGTTTCAAAGAACTTGTTCGTGTTGAGAAGGATCTTGAAACCAATACAACTCTTGTTACTGGGTTCGCTATTGATGTATTCGAAGCCGCAGTACGAGGTTTGCCGTACGAAGATGAATTGCAGTACGAGTTTATTCCATTTGAGGATGCCAATGGAAATTCTGCTGGGCATTACAATGATCTTGTTTACCAGGTTTATCTCAAGAAATACGATGCTGTTGTTGGAGATGTTACGATCACAGAGAACAGATCTCAATATGTTGATTTTACAATACCATATACTGACTTGGGTGTGGGAACGTTGGTACCAAATGCCAAGGAAAACTTGTGGATTTTTTTTAAACCACTTTCAACATGTCTTTGGATAGCAAGTGCTGCTTTCTTTATCCTAACCAGTTTTGTTGTTTGGATCATTGAGCGTCCTACTAACAAAGAATTCCACTGCACAGTAAAGGAACAAATTGGAAAGCTTTTCTGGTTTTCCTTTTCTACCCTGGTGTTTGCTTATACGGAGAAGTTGTCAAATAATTTGGCAAAGTTTGTAGTGATCATATGGGTGTTTGTAGTGCTTATATTGACGTCGAGTTATACTGCAACTTTAGCATCAATGATGACAGTGAAACAGATACAGTTAAACTCAAGAGGAAACTATATAGGTTACCAATTGGGTTCCTTAGGAGTTATAGTGAACTTGAACTTCCAAGAGCTTAAGTCATATCGTTCATGTGAGGAGTATCTTAATGCTCTATCAAAGGGAAGCAAGAATGGTGGTGTTTCTGGGATTATTGATGAGGTTCCGTACATCAATATCTTCCTTGCAAAGTATTCTGCTGACTACTCGATGATTAAAACTAGGTCTATCACCAATGGTTTTGCCTTTGTTTTCCCTAAAGGTTCGAAATTGGTTCAAGATGTGTCACGGCAAATTGAACGACTGAGACAGGAAGGAAAGCTTATAGAGATGGAAAATACCTGGTTTCGTGAGAAAACAAGTCTCATGTCTGATGAGGATATAATCCAGAGTGATACCAATACGATTGACCTCTATGACTTTCGTGCTGATTCGTATAGATCTGCAGCCTTTAAGGACGTTCTTCGATCTCCTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4

Protein Analysis

837

Amino Acids

94.04

Weight (kDa)

6.2

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 44 - 397 7.5e-11 Periplasmic binding protein
ANF_receptor PF01094 62 - 399 7.1e-57 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 477 - 571 2.2e-09 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 488 - 795 4.2e-12 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 587 - 678 2e-21 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000329)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00551 FvH4_2g33311 FvH4_4g17330 FvH4_5g24690 FvH4_6g24700
rosa_chinensis RchiOBHm_Chr3g0476481 RchiOBHm_Chr3g0497311 RchiOBHm_Chr4g0395221 RchiOBHm_Chr4g0409291 RchiOBHm_Chr5g0019361 RchiOBHm_Chr5g0052631 RchiOBHm_Chr6g0281401 RchiOBHm_Chr6g0297421 RchiOBHm_Chr7g0220391 RchiOBHm_Chr7g0237991
rosa_laevigata RLG00000000925 RLG00000001165 RLG00000001356 RLG00000001477 RLG00000002205 RLG00000002538 RLG00000003099 RLG00000003549 RLG00000003988 RLG00000008622 RLG00000008839 RLG00000010965 RLG00000011510 RLG00000012037 RLG00000013215 RLG00000013450 RLG00000015007 RLG00000017503 RLG00000019169 RLG00000019298 RLG00000020522 RLG00000021241 RLG00000021700 RLG00000022934 RLG00000022935 RLG00000023200 RLG00000026869 RLG00000028902 RLG00000030978 RLG00000032525 RLG00000033761 RLG00000034460 RLG00000034510 RLG00000034626 RLG00000035597 RLG00000035815 RLG00000036785 RLG00000037002
rosa_multiflora Rmu_sc0000147.1_g000040 Rmu_sc0000429.1_g000095 Rmu_sc0002357.1_g000041 Rmu_sc0003113.1_g000004 Rmu_sc0003426.1_g000006 Rmu_sc0004453.1_g000001 Rmu_sc0004455.1_g000005 Rmu_sc0004511.1_g000002 Rmu_sc0005782.1_g000003 Rmu_sc0007848.1_g000030 Rmu_sc0007863.1_g000005 Rmu_sc0008256.1_g000001 Rmu_sc0011325.1_g000005 Rmu_sc0012624.1_g000004 Rmu_sc0017974.1_g000002 Rmu_sc0018061.1_g000001 Rmu_ssc0000366.1_g000011 Rmu_ssc0000472.1_g000025
rosa_roxburghii Rroxscaffold_1G00010100 Rroxscaffold_1G00031270 Rroxscaffold_2G00108870 Rroxscaffold_2G00131670 Rroxscaffold_2G00142200 Rroxscaffold_3G00233060 Rroxscaffold_3G00233710 Rroxscaffold_4G00300200 Rroxscaffold_4G00318490 Rroxscaffold_4G00319390 Rroxscaffold_5G00340520 Rroxscaffold_5G00349510 Rroxscaffold_5G00374060 Rroxscaffold_6G00393340 Rroxscaffold_6G00405620 Rroxscaffold_6G00411840 Rroxscaffold_7G00187660
rosa_rugosa Rorug01G0090600 Rorug01G0091800 Rorug01G0168700 Rorug01G0192800 Rorug02G0326300 Rorug02G0353900 Rorug02G0354000 Rorug02G0408500 Rorug03G0151400 Rorug05G0150800 Rorug05G0150900 Rorug05G0407400 Rorug06G0111000
rosa_samantha Rh3DG370900
rosa_wichuraiana Rw1G001900 Rw2G022570 Rw3G020950 Rw3G028020 Rw4G009960 Rw5G032340 Rw6G003630 Rw6G018060 Rw7G024540 Rw7G035380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 909
AatII GACGTC 2 cut(s) 1209, 1985
Acc65I GGTACC 1 cut(s) 1708
AccB1I GGYRCC 1 cut(s) 1708
AccI GTMKAC 1 cut(s) 252
AciI CCGC 2 cut(s) 389, 1491
AclI AACGTT 1 cut(s) 1703
AclWI GGATC 5 cut(s) 803, 944, 957, 1443, 1820
AcsI RAATTY 7 cut(s) 817, 835, 1051, 1134, 1294, 1561, 1838
AcuI CTGAAG 3 cut(s) 141, 501, 716
AcyI GRCGYC 2 cut(s) 1206, 1982
AfaI GTAC 6 cut(s) 623, 1497, 1511, 1529, 1710, 2204
AfiI CCNNNNNNNGG 1 cut(s) 609
AflII CTTAAG 1 cut(s) 2111
AflIII ACRYGT 1 cut(s) 1757
AjnI CCWGG 6 cut(s) 942, 1333, 1343, 1593, 1896, 2375
AjuI GAANNNNNNNTTGG 2 cut(s) 1207, 1239
AleI CACNNNNGTG 1 cut(s) 72
AloI GAACNNNNNNTCC 2 cut(s) 162, 194
AluBI AGCT 9 cut(s) 186, 296, 676, 1082, 1276, 1301, 1873, 2110, 2356
AluI AGCT 9 cut(s) 186, 296, 676, 1082, 1276, 1301, 1873, 2110, 2356
Alw21I GWGCWC 2 cut(s) 346, 678
Alw26I GTCTC 6 cut(s) 414, 593, 895, 1147, 2335, 2402
Alw44I GTGCAC 1 cut(s) 342
AlwI GGATC 5 cut(s) 803, 944, 957, 1443, 1820
AoxI GGCC 3 cut(s) 198, 1226, 1331
ApaLI GTGCAC 1 cut(s) 342
ApeKI GCWGC 6 cut(s) 186, 296, 1270, 1273, 1778, 2480
ApoI RAATTY 7 cut(s) 817, 835, 1051, 1134, 1294, 1561, 1838
ArsI GACNNNNNNTTYG 2 cut(s) 1244, 1276
Asp700I GAANNNNTTC 3 cut(s) 279, 966, 1419
Asp718I GGTACC 1 cut(s) 1708
AspLEI GCGC 1 cut(s) 739
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 4 cut(s) 284, 1142, 1214, 2257
AsuII TTCGAA 2 cut(s) 1485, 2300
AxyI CCTNAGG 1 cut(s) 2077
BaeGI GKGCMC 2 cut(s) 346, 502
BaeI ACNNNNGTAYC 2 cut(s) 1692, 1725
BamHI GGATCC 1 cut(s) 949
BanI GGYRCC 1 cut(s) 1708
BanII GRGCYC 2 cut(s) 678, 1018
BarI GAAGNNNNNNTAC 2 cut(s) 1479, 1511
BbsI GAAGAC 1 cut(s) 873
Bbv12I GWGCWC 2 cut(s) 346, 678
BbvI GCAGC 6 cut(s) 173, 283, 1282, 1285, 1765, 2492
BccI CCATC 7 cut(s) 225, 583, 901, 1070, 1142, 1171, 2359
BceAI ACGGC 2 cut(s) 1492, 2339
BcgI CGANNNNNNTGC 2 cut(s) 770, 804
BciT130I CCWGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
BclI TGATCA 2 cut(s) 687, 1950
BcoDI GTCTC 6 cut(s) 414, 593, 895, 1147, 2335, 2402
BfaI CTAG 3 cut(s) 810, 1019, 2256
BfmI CTRYAG 4 cut(s) 232, 253, 669, 2478
BfrI CTTAAG 1 cut(s) 2111
BglII AGATCT 2 cut(s) 1652, 2474
BisI GCNGC 8 cut(s) 187, 297, 390, 1271, 1274, 1491, 1779, 2481
BlsI GCNGC 8 cut(s) 188, 298, 391, 1272, 1275, 1492, 1780, 2482
Bme1390I CCNGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 5 cut(s) 951, 1342, 1710, 2074, 2199
BmrFI CCNGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
BmrI ACTGGG 1 cut(s) 1473
BmsI GCATC 4 cut(s) 994, 1540, 1606, 2015
BmuI ACTGGG 1 cut(s) 1473
BpiI GAAGAC 1 cut(s) 873
BpmI CTGGAG 1 cut(s) 965
Bpu14I TTCGAA 2 cut(s) 1485, 2300
BpuEI CTTGAG 3 cut(s) 55, 1589, 2026
BsaHI GRCGYC 2 cut(s) 1206, 1982
BsaI GGTCTC 1 cut(s) 593
BsaJI CCNNGG 2 cut(s) 1719, 1896
BsaXI ACNNNNNCTCC 4 cut(s) 1907, 1937, 2073, 2103
Bsc4I CCNNNNNNNGG 1 cut(s) 609
Bse1I ACTGG 3 cut(s) 1394, 1468, 1797
Bse21I CCTNAGG 1 cut(s) 2077
Bse3DI GCAATG 1 cut(s) 765
BseBI CCWGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
BseDI CCNNGG 2 cut(s) 1719, 1896
BseGI GGATG 2 cut(s) 777, 1555
BseLI CCNNNNNNNGG 1 cut(s) 609
BseMI GCAATG 1 cut(s) 765
BseMII CTCAG 4 cut(s) 196, 1280, 1346, 2330
BseNI ACTGG 3 cut(s) 1394, 1468, 1797
BseRI GAGGAG 3 cut(s) 637, 943, 2147
BseSI GKGCMC 2 cut(s) 346, 502
BseXI GCAGC 6 cut(s) 173, 283, 1282, 1285, 1765, 2492
BseYI CCCAGC 2 cut(s) 868, 1568
BsgI GTGCAG 3 cut(s) 206, 1002, 1831
BshFI GGCC 3 cut(s) 200, 1228, 1333
BshNI GGYRCC 1 cut(s) 1708
BsiHKAI GWGCWC 2 cut(s) 346, 678
BsiWI CGTACG 1 cut(s) 1509
BslI CCNNNNNNNGG 1 cut(s) 609
BsmAI GTCTC 6 cut(s) 414, 593, 895, 1147, 2335, 2402
BsmI GAATGC 2 cut(s) 760, 826
BsnI GGCC 3 cut(s) 200, 1228, 1333
Bso31I GGTCTC 1 cut(s) 593
Bsp119I TTCGAA 2 cut(s) 1485, 2300
Bsp1286I GDGCHC 4 cut(s) 346, 502, 678, 1018
BspACI CCGC 2 cut(s) 389, 1491
BspANI GGCC 3 cut(s) 200, 1228, 1333
BspCNI CTCAG 4 cut(s) 195, 1279, 1347, 2331
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 5 cut(s) 951, 1342, 1710, 2074, 2199
BspMAI CTGCAG 2 cut(s) 673, 2482
BspPI GGATC 5 cut(s) 803, 944, 957, 1443, 1820
BspT104I TTCGAA 2 cut(s) 1485, 2300
BspT107I GGYRCC 1 cut(s) 1708
BspTI CTTAAG 1 cut(s) 2111
BspTNI GGTCTC 1 cut(s) 593
BsrDI GCAATG 1 cut(s) 765
BsrI ACTGG 3 cut(s) 1394, 1468, 1797
BssECI CCNNGG 2 cut(s) 1719, 1896
BssNI GRCGYC 2 cut(s) 1206, 1982
BssT1I CCWWGG 1 cut(s) 1719
Bst2UI CCWGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
Bst4CI ACNGT 5 cut(s) 257, 911, 1852, 2020, 2034
Bst6I CTCTTC 1 cut(s) 285
BstACI GRCGYC 2 cut(s) 1206, 1982
BstAFI CTTAAG 1 cut(s) 2111
BstAPI GCANNNNNTGC 3 cut(s) 865, 1004, 1778
BstBI TTCGAA 2 cut(s) 1485, 2300
BstC8I GCNNGC 2 cut(s) 24, 465
BstDEI CTNAG 5 cut(s) 182, 1266, 1355, 2077, 2339
BstEII GGTNACC 1 cut(s) 2060
BstF5I GGATG 2 cut(s) 777, 1555
BstHHI GCGC 1 cut(s) 739
BstMAI GTCTC 6 cut(s) 414, 593, 895, 1147, 2335, 2402
BstMWI GCNNNNNNNGC 7 cut(s) 293, 473, 865, 1004, 1013, 1778, 2003
BstNI CCWGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
BstNSI RCATGY 2 cut(s) 722, 1761
BstPI GGTNACC 1 cut(s) 2060
BstSCI CCNGG 6 cut(s) 942, 1333, 1343, 1593, 1896, 2375
BstSFI CTRYAG 4 cut(s) 232, 253, 669, 2478
BstSLI GKGCMC 2 cut(s) 346, 502
BstV1I GCAGC 6 cut(s) 173, 283, 1282, 1285, 1765, 2492
BstV2I GAAGAC 1 cut(s) 873
BstX2I RGATCY 4 cut(s) 949, 1435, 1652, 2474
BstYI RGATCY 4 cut(s) 949, 1435, 1652, 2474
Bsu36I CCTNAGG 1 cut(s) 2077
BsuRI GGCC 3 cut(s) 200, 1228, 1333
BtsCI GGATG 2 cut(s) 777, 1555
BtsI GCAGTG 2 cut(s) 666, 1843
BtsIMutI CAGTG 5 cut(s) 666, 903, 1401, 1843, 2025
Cac8I GCNNGC 2 cut(s) 24, 465
CciI TCATGA 1 cut(s) 798
CfoI GCGC 1 cut(s) 739
Cfr13I GGNCC 1 cut(s) 199
CseI GACGC 1 cut(s) 1811
CsiI ACCWGGT 2 cut(s) 1593, 2375
Csp6I GTAC 6 cut(s) 622, 1496, 1510, 1528, 1709, 2203
CspCI CAANNNNNGTGG 2 cut(s) 2152, 2187
CviAII CATG 8 cut(s) 134, 608, 719, 799, 814, 1758, 2127, 2401
CviQI GTAC 6 cut(s) 622, 1496, 1510, 1528, 1709, 2203
DdeI CTNAG 5 cut(s) 182, 1266, 1355, 2077, 2339
DraI TTTAAA 1 cut(s) 1744
DrdI GACNNNNNNGTC 1 cut(s) 909
DseDI GACNNNNNNGTC 1 cut(s) 909
Eam1104I CTCTTC 1 cut(s) 285
EarI CTCTTC 1 cut(s) 285
Ecl136II GAGCTC 1 cut(s) 676
Eco130I CCWWGG 1 cut(s) 1719
Eco24I GRGCYC 2 cut(s) 678, 1018
Eco31I GGTCTC 1 cut(s) 593
Eco53kI GAGCTC 1 cut(s) 676
Eco57I CTGAAG 3 cut(s) 141, 501, 716
Eco81I CCTNAGG 1 cut(s) 2077
Eco91I GGTNACC 1 cut(s) 2060
EcoICRI GAGCTC 1 cut(s) 676
EcoO65I GGTNACC 1 cut(s) 2060
EcoRI GAATTC 1 cut(s) 1838
EcoRII CCWGG 6 cut(s) 942, 1333, 1343, 1593, 1896, 2375
EcoT14I CCWWGG 1 cut(s) 1719
EcoT38I GRGCYC 2 cut(s) 678, 1018
ErhI CCWWGG 1 cut(s) 1719
FaeI CATG 8 cut(s) 137, 611, 722, 802, 817, 1761, 2130, 2404
FatI CATG 8 cut(s) 133, 607, 718, 798, 813, 1757, 2126, 2400
FauNDI CATATG 3 cut(s) 1000, 1328, 1955
FbaI TGATCA 2 cut(s) 687, 1950
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 8 cut(s) 187, 297, 390, 1271, 1274, 1491, 1779, 2481
FokI GGATG 2 cut(s) 784, 1562
FriOI GRGCYC 2 cut(s) 678, 1018
Fsp4HI GCNGC 8 cut(s) 187, 297, 390, 1271, 1274, 1491, 1779, 2481
FspBI CTAG 3 cut(s) 810, 1019, 2256
GlaI GCGC 1 cut(s) 738
GluI GCNGC 8 cut(s) 187, 297, 390, 1271, 1274, 1491, 1779, 2481
GsaI CCCAGC 2 cut(s) 872, 1572
GsuI CTGGAG 1 cut(s) 965
HaeIII GGCC 3 cut(s) 200, 1228, 1333
HgaI GACGC 1 cut(s) 1811
HhaI GCGC 1 cut(s) 739
Hin1I GRCGYC 2 cut(s) 1206, 1982
Hin1II CATG 8 cut(s) 137, 611, 722, 802, 817, 1761, 2130, 2404
Hin6I GCGC 1 cut(s) 737
HinP1I GCGC 1 cut(s) 737
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HindIII AAGCTT 2 cut(s) 1871, 2354
HinfI GANTC 6 cut(s) 145, 158, 263, 851, 1323, 2465
HphI GGTGA 4 cut(s) 284, 1142, 1214, 2257
Hpy166II GTNNAC 5 cut(s) 253, 344, 586, 1591, 2092
Hpy188I TCNGA 4 cut(s) 208, 426, 1168, 2407
Hpy8I GTNNAC 5 cut(s) 253, 344, 586, 1591, 2092
Hpy99I CGWCG 1 cut(s) 1987
HpyAV CCTTC 7 cut(s) 58, 161, 454, 691, 776, 1426, 2342
HpyCH4III ACNGT 5 cut(s) 257, 911, 1852, 2020, 2034
HpyCH4IV ACGT 4 cut(s) 1206, 1703, 1982, 2493
HpyF10VI GCNNNNNNNGC 7 cut(s) 293, 473, 865, 1004, 1013, 1778, 2003
HpyF3I CTNAG 5 cut(s) 182, 1266, 1355, 2077, 2339
HpySE526I ACGT 4 cut(s) 1206, 1703, 1982, 2493
Hsp92I GRCGYC 2 cut(s) 1206, 1982
Hsp92II CATG 8 cut(s) 137, 611, 722, 802, 817, 1761, 2130, 2404
HspAI GCGC 1 cut(s) 737
KpnI GGTACC 1 cut(s) 1712
Ksp22I TGATCA 2 cut(s) 687, 1950
LmnI GCTCC 2 cut(s) 681, 1079
Lsp1109I GCAGC 6 cut(s) 173, 283, 1282, 1285, 1765, 2492
LweI GCATC 4 cut(s) 994, 1540, 1606, 2015
MabI ACCWGGT 2 cut(s) 1593, 2375
MaeI CTAG 3 cut(s) 810, 1019, 2256
MaeII ACGT 4 cut(s) 1206, 1703, 1982, 2493
MaeIII GTNAC 7 cut(s) 43, 65, 1202, 1459, 1633, 2060, 2319
MboII GAAGA 8 cut(s) 134, 272, 671, 873, 1264, 1526, 2206, 2489
MfeI CAATTG 1 cut(s) 2066
MflI RGATCY 4 cut(s) 949, 1435, 1652, 2474
MhlI GDGCHC 4 cut(s) 346, 502, 678, 1018
MmeI TCCRAC 1 cut(s) 1606
MroXI GAANNNNTTC 3 cut(s) 279, 966, 1419
MslI CAYNNNNRTG 7 cut(s) 72, 138, 194, 323, 612, 1578, 1958
MspA1I CMGCKG 2 cut(s) 186, 296
MspCI CTTAAG 1 cut(s) 2111
MspR9I CCNGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
MunI CAATTG 1 cut(s) 2066
Mva1269I GAATGC 2 cut(s) 760, 826
MvaI CCWGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
MwoI GCNNNNNNNGC 7 cut(s) 293, 473, 865, 1004, 1013, 1778, 2003
NdeI CATATG 3 cut(s) 1000, 1328, 1955
NlaIII CATG 8 cut(s) 137, 611, 722, 802, 817, 1761, 2130, 2404
NlaIV GGNNCC 5 cut(s) 951, 1342, 1710, 2074, 2199
NmuCI GTSAC 4 cut(s) 43, 65, 1202, 2319
NspI RCATGY 2 cut(s) 722, 1761
NspV TTCGAA 2 cut(s) 1485, 2300
OliI CACNNNNGTG 1 cut(s) 72
PagI TCATGA 1 cut(s) 798
PciI ACATGT 1 cut(s) 1757
PctI GAATGC 2 cut(s) 760, 826
PdmI GAANNNNTTC 3 cut(s) 279, 966, 1419
PfeI GAWTC 6 cut(s) 145, 158, 263, 851, 1323, 2465
Pfl23II CGTACG 1 cut(s) 1509
PfoI TCCNGGA 1 cut(s) 1343
PkrI GCNGC 8 cut(s) 188, 298, 391, 1272, 1275, 1492, 1780, 2482
PscI ACATGT 1 cut(s) 1757
Psp124BI GAGCTC 1 cut(s) 678
Psp1406I AACGTT 1 cut(s) 1703
Psp6I CCWGG 6 cut(s) 942, 1333, 1343, 1593, 1896, 2375
PspEI GGTNACC 1 cut(s) 2060
PspFI CCCAGC 2 cut(s) 868, 1568
PspGI CCWGG 6 cut(s) 942, 1333, 1343, 1593, 1896, 2375
PspLI CGTACG 1 cut(s) 1509
PspN4I GGNNCC 5 cut(s) 951, 1342, 1710, 2074, 2199
PspPI GGNCC 1 cut(s) 199
PstI CTGCAG 2 cut(s) 673, 2482
PsuI RGATCY 4 cut(s) 949, 1435, 1652, 2474
PvuII CAGCTG 2 cut(s) 186, 296
RsaI GTAC 6 cut(s) 623, 1497, 1511, 1529, 1710, 2204
RsaNI GTAC 6 cut(s) 622, 1496, 1510, 1528, 1709, 2203
RseI CAYNNNNRTG 7 cut(s) 72, 138, 194, 323, 612, 1578, 1958
SacI GAGCTC 1 cut(s) 678
SatI GCNGC 8 cut(s) 187, 297, 390, 1271, 1274, 1491, 1779, 2481
Sau96I GGNCC 1 cut(s) 199
ScrFI CCNGG 6 cut(s) 944, 1335, 1345, 1595, 1898, 2377
SduI GDGCHC 4 cut(s) 346, 502, 678, 1018
SexAI ACCWGGT 2 cut(s) 1593, 2375
SfaNI GCATC 4 cut(s) 994, 1540, 1606, 2015
SfcI CTRYAG 4 cut(s) 232, 253, 669, 2478
SfuI TTCGAA 2 cut(s) 1485, 2300
SmiMI CAYNNNNRTG 7 cut(s) 72, 138, 194, 323, 612, 1578, 1958
SmlI CTYRAG 4 cut(s) 70, 1604, 2041, 2111
SmoI CTYRAG 4 cut(s) 70, 1604, 2041, 2111
SsiI CCGC 2 cut(s) 389, 1491
SspI AATATT 1 cut(s) 637
SspMI CTAG 3 cut(s) 810, 1019, 2256
SstI GAGCTC 1 cut(s) 678
StyD4I CCNGG 6 cut(s) 942, 1333, 1343, 1593, 1896, 2375
StyI CCWWGG 1 cut(s) 1719
TaaI ACNGT 5 cut(s) 257, 911, 1852, 2020, 2034
TaiI ACGT 4 cut(s) 1209, 1706, 1985, 2496
TaqI TCGA 6 cut(s) 150, 1485, 1985, 2243, 2300, 2500
TauI GCSGC 2 cut(s) 392, 1493
TfiI GAWTC 6 cut(s) 145, 158, 263, 851, 1323, 2465
TscAI CASTG 5 cut(s) 673, 903, 1401, 1850, 2025
TseFI GTSAC 4 cut(s) 43, 65, 1202, 2319
TseI GCWGC 6 cut(s) 186, 296, 1270, 1273, 1778, 2480
Tsp45I GTSAC 4 cut(s) 43, 65, 1202, 2319
TspDTI ATGAA 9 cut(s) 95, 122, 672, 776, 830, 848, 1002, 1533, 2115
TspGWI ACGGA 2 cut(s) 1928, 2190
TspRI CASTG 5 cut(s) 673, 903, 1401, 1850, 2025
Vha464I CTTAAG 1 cut(s) 2111
VneI GTGCAC 1 cut(s) 342
XapI RAATTY 7 cut(s) 817, 835, 1051, 1134, 1294, 1561, 1838
XceI RCATGY 2 cut(s) 722, 1761
XmiI GTMKAC 1 cut(s) 252
XmnI GAANNNNTTC 3 cut(s) 279, 966, 1419
XspI CTAG 3 cut(s) 810, 1019, 2256
ZraI GACGTC 2 cut(s) 1207, 1983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.