Rorug02G0408500
MYB Family

At2g29880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000329
Physical Location & Seq
Forward (+)
52097094 .. 52103295
6202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0408500.1

Sequence Viewer

Length: 2097 bp
ATGCCGGTACTGCGTGGAAGGGGCCGTGGAGCAGCTAAAAAGCAGGAGGTTACGAATCCGATCGACGCCGGAGAGGCCATTGCCACCAGAACAAGGCGAAGGCGAGCGGCGGCGGCGGCGGCGGCACTGCCGAATAATAATAATAACAACAACAATAATAATCAGGTGAAGGAGGAAAAGAATCGGAAGGCGGCGGCTGCGGCGGCGGCCGGTGAGGAGAAGAAGGTAGTCGTTAAGGCGGAGAAAAAGAGGGTCGTTGAGAAGGAGGAAGTGAAAGAGAAGAAGATGAATGACAGTGGTAGTGGCGGCGTTAGGAGTAATGCCAAGGCTGAAGAAGAAGGCAGCACTGCTCCTCTTCCTGAGAAGGTTACTGTTGGTGGTTCCCCTGTCTACAGATTAGATAGAAAGCTGGGTAAGGGTGGCTTCGGACAAGTGTATGTCGGTCGGCGTGTTTCTGCTATAAATACGAATGAGAGAACTGGACCAGGAGCTGTTGAGGTGGCCTTAAAACTCGAGCACAAAAATAGTAAAGGGTGCAATTATGGACCCCCACAGGAGTGGAAAGTTTATGACACTCTTGGTGGCAGCCATGGTGTGCCGCGGGTACACTATAAAGGCAAGCAAGGCGAGTATTATATTATGGTGATGGACATGTTGGGGCCAAGCTTGTGGGATGTTTGGAATAATGGCAATCAAACAATGGCCATTGAAATGGTTGCGTGTATTGCCATTGAAGCAATATCAATATTGGAGAAGATGCATTCTCGAGGGTATGTACATGGAGATGTAAAGCCTGAAAACTTTCTACTTGGTACTCCTGGGACTCCTGATGAGAAAAAGCTATTTTTAGTTGATCTTGGACTAGCAACTAAATGGCGAGATAGTTCAACCGGTCAGCATGTTGATTATGACCAAAGGCCAGATGTTTTCAGAGGAACAGTACGTTACGCTAGTGTGCATGCTCATTTAGGGAGAACGAGTAGTAGGAGAGATGATCTTGAGTCTCTAGCTTATACCCTTGTGTTCCTTCTCCGTGGTCGCCTCCCCTGGCAAGGATACCAGGGAGAGAATAAAGGATTCCTTGTCTGCAAGAAGAAGATGGCAACGTCTCCAGAGACCTTGTGTTCTTTCTGTCCACTCCCTTTTAGACAATTTGTTGAACATGTGGTGAACTTGAAGTTTGATGAAGAACCTAATTATGCAAAATATATATCACTATTTGATGGGACTGTAAGTCCAAATCCTGATATCAGGCCAATAAACACAGAGGGTGCACAGAAGCTTATTAATCTGGTTGGTCATAAGAGAGGAAGATTGACAATGGAGGAGGAGGATGATGAACAACCAAAGAAGAGAATTAGAATGGGTATGCCAGCAACACAATGGATCAGTGTTTATAATGCTCGGAGACCGATGAAGCAAAGGTATCACTATAATGTGGCTGATACAAGGCTTGCACAGCATATTGAGAAAGGGAATGAGGATGGGTTATATATAAGCAGTGTGGCTTCTTCTCAAAATTTGTGGGCCTTGATTATGGATGCAGGCACTGGTTTCACTTCCCAAGTTTATGAACTTGCTCCGACTTGTCTTCACAAGGAATGGATAATGGAACAGTGGGAGAAAAGCTATTACATCAGTGCATTAGCCGGAGCTACTAATGGGAGTTCATTAGTAGTAATGTCCAAGGGTACAACTTTTACGCAGCAGTCATACAAAGTCAGCGATACATTTCCATTTAAGTGGATTAACAAAAAGTGGAAAGAGGACTTTTTTGTTACGTCAATGGCCACTGCAGGAAGTAGATGGGCCATTGTTATGTCTCGGGGTGCTAATTATTCAGACCAAGTTGTTGAACTAGATTTCCTTTATCCTAGTGAAGGAATACATCGGCGCTGGGATTCTGGATATCGTATAACTGCAACTGCAGCAACATGGGATCAGGCCGCTTTTGTTCTCAGCGTGCCAAGGAAGAAGCCTCAAGATGAAACCCAGGAGACGCTTCGTACTTCTGCTTTTCCAAGTACACATGTCAAGGAGAAGTGGGCGAAGAACCTTTATATTGCATCTATTTGTTATGGACGAACAGTATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

698

Amino Acids

78.13

Weight (kDa)

9.36

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase_fungal PF17667 84 - 342 8.6e-09 Fungal protein kinase
Pkinase PF00069 131 - 365 3.7e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 133 - 297 4e-07 Protein tyrosine and serine/threonine kinase
DUF7477 PF24289 432 - 698 1.6e-161 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000329)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00551 FvH4_2g33311 FvH4_4g17330 FvH4_5g24690 FvH4_6g24700
rosa_chinensis RchiOBHm_Chr3g0476481 RchiOBHm_Chr3g0497311 RchiOBHm_Chr4g0395221 RchiOBHm_Chr4g0409291 RchiOBHm_Chr5g0019361 RchiOBHm_Chr5g0052631 RchiOBHm_Chr6g0281401 RchiOBHm_Chr6g0297421 RchiOBHm_Chr7g0220391 RchiOBHm_Chr7g0237991
rosa_laevigata RLG00000000925 RLG00000001165 RLG00000001356 RLG00000001477 RLG00000002205 RLG00000002538 RLG00000003099 RLG00000003549 RLG00000003988 RLG00000008622 RLG00000008839 RLG00000010965 RLG00000011510 RLG00000012037 RLG00000013215 RLG00000013450 RLG00000015007 RLG00000017503 RLG00000019169 RLG00000019298 RLG00000020522 RLG00000021241 RLG00000021700 RLG00000022934 RLG00000022935 RLG00000023200 RLG00000026869 RLG00000028902 RLG00000030978 RLG00000032525 RLG00000033761 RLG00000034460 RLG00000034510 RLG00000034626 RLG00000035597 RLG00000035815 RLG00000036785 RLG00000037002
rosa_multiflora Rmu_sc0000147.1_g000040 Rmu_sc0000429.1_g000095 Rmu_sc0002357.1_g000041 Rmu_sc0003113.1_g000004 Rmu_sc0003426.1_g000006 Rmu_sc0004453.1_g000001 Rmu_sc0004455.1_g000005 Rmu_sc0004511.1_g000002 Rmu_sc0005782.1_g000003 Rmu_sc0007848.1_g000030 Rmu_sc0007863.1_g000005 Rmu_sc0008256.1_g000001 Rmu_sc0011325.1_g000005 Rmu_sc0012624.1_g000004 Rmu_sc0017974.1_g000002 Rmu_sc0018061.1_g000001 Rmu_ssc0000366.1_g000011 Rmu_ssc0000472.1_g000025
rosa_roxburghii Rroxscaffold_1G00010100 Rroxscaffold_1G00031270 Rroxscaffold_2G00108870 Rroxscaffold_2G00131670 Rroxscaffold_2G00142200 Rroxscaffold_3G00233060 Rroxscaffold_3G00233710 Rroxscaffold_4G00300200 Rroxscaffold_4G00318490 Rroxscaffold_4G00319390 Rroxscaffold_5G00340520 Rroxscaffold_5G00349510 Rroxscaffold_5G00374060 Rroxscaffold_6G00393340 Rroxscaffold_6G00405620 Rroxscaffold_6G00411840 Rroxscaffold_7G00187660
rosa_rugosa Rorug01G0090600 Rorug01G0091800 Rorug01G0168700 Rorug01G0192800 Rorug02G0326300 Rorug02G0353900 Rorug02G0354000 Rorug02G0408500 Rorug03G0151400 Rorug05G0150800 Rorug05G0150900 Rorug05G0407400 Rorug06G0111000
rosa_samantha Rh3DG370900
rosa_wichuraiana Rw1G001900 Rw2G022570 Rw3G020950 Rw3G028020 Rw4G009960 Rw5G032340 Rw6G003630 Rw6G018060 Rw7G024540 Rw7G035380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1398
AccBSI CCGCTC 1 cut(s) 107
AccI GTMKAC 1 cut(s) 390
AccII CGCG 1 cut(s) 601
AclWI GGATC 2 cut(s) 1394, 1947
AcoI YGGCCR 3 cut(s) 207, 702, 1788
AcsI RAATTY 1 cut(s) 1519
AcuI CTGAAG 1 cut(s) 351
AcyI GRCGYC 1 cut(s) 66
AfaI GTAC 8 cut(s) 9, 606, 777, 814, 942, 1693, 2008, 2026
AfiI CCNNNNNNNGG 3 cut(s) 93, 1052, 1880
AflIII ACRYGT 3 cut(s) 651, 1162, 2029
AgeI ACCGGT 1 cut(s) 890
AgsI TTSAA 6 cut(s) 710, 734, 888, 1160, 1177, 1856
AhdI GACNNNNNGTC 1 cut(s) 1233
AjnI CCWGG 5 cut(s) 484, 817, 1046, 1059, 1992
AleI CACNNNNGTG 1 cut(s) 556
AloI GAACNNNNNNTCC 2 cut(s) 1848, 1880
AluBI AGCT 9 cut(s) 35, 409, 491, 666, 841, 1010, 1282, 1629, 1655
AluI AGCT 9 cut(s) 35, 409, 491, 666, 841, 1010, 1282, 1629, 1655
Alw21I GWGCWC 2 cut(s) 519, 1276
Alw26I GTCTC 6 cut(s) 1008, 1109, 1113, 1402, 1827, 1991
Alw44I GTGCAC 1 cut(s) 1272
AlwI GGATC 2 cut(s) 1394, 1947
AlwNI CAGNNNCTG 2 cut(s) 491, 1550
Ama87I CYCGRG 3 cut(s) 512, 765, 1824
ApaLI GTGCAC 1 cut(s) 1272
ApeKI GCWGC 6 cut(s) 32, 197, 342, 585, 1705, 1928
ApoI RAATTY 1 cut(s) 1519
AseI ATTAAT 1 cut(s) 1287
AsiGI ACCGGT 1 cut(s) 890
Asp700I GAANNNNTTC 1 cut(s) 801
AspLEI GCGC 1 cut(s) 1896
AspS9I GGNCC 6 cut(s) 22, 482, 545, 659, 1527, 1809
AsuHPI GGTGA 4 cut(s) 178, 224, 655, 1180
AvaI CYCGRG 3 cut(s) 512, 765, 1824
AvaII GGWCC 2 cut(s) 482, 545
BaeGI GKGCMC 1 cut(s) 1276
BalI TGGCCA 2 cut(s) 704, 1790
BbsI GAAGAC 1 cut(s) 1583
Bbv12I GWGCWC 2 cut(s) 519, 1276
BbvI GCAGC 6 cut(s) 44, 184, 354, 597, 1717, 1940
BccI CCATC 5 cut(s) 640, 1093, 1217, 1478, 1800
BceAI ACGGC 1 cut(s) 9
BciT130I CCWGG 5 cut(s) 486, 819, 1048, 1061, 1994
BciVI GTATCC 1 cut(s) 1049
BcoDI GTCTC 6 cut(s) 1008, 1109, 1113, 1402, 1827, 1991
BfaI CTAG 5 cut(s) 863, 951, 1007, 1859, 1875
BfmI CTRYAG 3 cut(s) 391, 1794, 1926
BfoI RGCGCY 1 cut(s) 1897
BfuI GTATCC 1 cut(s) 1049
BglI GCCNNNNNGGC 1 cut(s) 74
Bme1390I CCNGG 5 cut(s) 486, 819, 1048, 1061, 1994
Bme18I GGWCC 2 cut(s) 482, 545
BmeRI GACNNNNNGTC 1 cut(s) 1233
BmeT110I CYCGRG 3 cut(s) 512, 765, 1824
BmgT120I GGNCC 6 cut(s) 22, 482, 545, 659, 1527, 1809
BmiI GGNNCC 4 cut(s) 23, 382, 547, 660
BmrFI CCNGG 5 cut(s) 486, 819, 1048, 1061, 1994
BmsI GCATC 3 cut(s) 747, 1531, 2075
BpiI GAAGAC 1 cut(s) 1583
BpmI CTGGAG 1 cut(s) 1095
BpuEI CTTGAG 2 cut(s) 1019, 1965
BsaHI GRCGYC 1 cut(s) 66
BsaI GGTCTC 2 cut(s) 1109, 1402
BsaWI WCCGGW 1 cut(s) 890
BsaXI ACNNNNNCTCC 2 cut(s) 964, 994
Bsc4I CCNNNNNNNGG 3 cut(s) 93, 1052, 1880
Bse118I RCCGGY 3 cut(s) 4, 209, 890
Bse1I ACTGG 2 cut(s) 484, 1555
Bse3DI GCAATG 1 cut(s) 78
BseBI CCWGG 5 cut(s) 486, 819, 1048, 1061, 1994
BseGI GGATG 4 cut(s) 679, 1339, 1489, 1546
BseLI CCNNNNNNNGG 3 cut(s) 93, 1052, 1880
BseMI GCAATG 1 cut(s) 78
BseMII CTCAG 2 cut(s) 351, 1972
BseNI ACTGG 2 cut(s) 484, 1555
BseRI GAGGAG 4 cut(s) 230, 342, 1340, 1343
BseSI GKGCMC 1 cut(s) 1276
BseX3I CGGCCG 1 cut(s) 207
BseXI GCAGC 6 cut(s) 44, 184, 354, 597, 1717, 1940
BseYI CCCAGC 2 cut(s) 409, 1896
Bsh1236I CGCG 1 cut(s) 601
Bsh1285I CGRYCG 3 cut(s) 63, 210, 445
BshTI ACCGGT 1 cut(s) 890
BsiEI CGRYCG 3 cut(s) 63, 210, 445
BsiHKAI GWGCWC 2 cut(s) 519, 1276
BsiHKCI CYCGRG 3 cut(s) 512, 765, 1824
BsiSI CCGG 5 cut(s) 5, 69, 210, 891, 1650
BslFI GGGAC 2 cut(s) 835, 1240
BslI CCNNNNNNNGG 3 cut(s) 93, 1052, 1880
BsmAI GTCTC 6 cut(s) 1008, 1109, 1113, 1402, 1827, 1991
BsmBI CGTCTC 2 cut(s) 1113, 1991
BsmFI GGGAC 2 cut(s) 835, 1240
BsmI GAATGC 1 cut(s) 760
Bso31I GGTCTC 2 cut(s) 1109, 1402
BsoBI CYCGRG 3 cut(s) 512, 765, 1824
Bsp1286I GDGCHC 2 cut(s) 519, 1276
Bsp1407I TGTACA 1 cut(s) 775
Bsp143I GATC 5 cut(s) 60, 853, 994, 1386, 1939
Bsp19I CCATGG 1 cut(s) 589
BspCNI CTCAG 2 cut(s) 352, 1971
BspFNI CGCG 1 cut(s) 601
BspLI GGNNCC 4 cut(s) 23, 382, 547, 660
BspMAI CTGCAG 2 cut(s) 1798, 1930
BspPI GGATC 2 cut(s) 1394, 1947
BspTNI GGTCTC 2 cut(s) 1109, 1402
BsrBI CCGCTC 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 78
BsrFI RCCGGY 3 cut(s) 4, 209, 890
BsrGI TGTACA 1 cut(s) 775
BsrI ACTGG 2 cut(s) 484, 1555
BssAI RCCGGY 3 cut(s) 4, 209, 890
BssMI GATC 5 cut(s) 60, 853, 994, 1386, 1939
BssNI GRCGYC 1 cut(s) 66
BssT1I CCWWGG 4 cut(s) 324, 589, 1686, 1967
Bst2UI CCWGG 5 cut(s) 486, 819, 1048, 1061, 1994
Bst4CI ACNGT 6 cut(s) 296, 373, 940, 1231, 1617, 2089
Bst6I CTCTTC 2 cut(s) 360, 1346
BstACI GRCGYC 1 cut(s) 66
BstAUI TGTACA 1 cut(s) 775
BstC8I GCNNGC 7 cut(s) 105, 620, 960, 1374, 1455, 1546, 1964
BstDEI CTNAG 2 cut(s) 360, 1958
BstDSI CCRYGG 4 cut(s) 25, 589, 599, 1033
BstENI CCTNNNNNAGG 1 cut(s) 1878
BstF5I GGATG 4 cut(s) 679, 1339, 1489, 1546
BstFNI CGCG 1 cut(s) 601
BstH2I RGCGCY 1 cut(s) 1897
BstHHI GCGC 1 cut(s) 1896
BstKTI GATC 5 cut(s) 63, 856, 997, 1389, 1942
BstMAI GTCTC 6 cut(s) 1008, 1109, 1113, 1402, 1827, 1991
BstMBI GATC 5 cut(s) 60, 853, 994, 1386, 1939
BstMCI CGRYCG 3 cut(s) 63, 210, 445
BstNI CCWGG 5 cut(s) 486, 819, 1048, 1061, 1994
BstNSI RCATGY 5 cut(s) 655, 902, 962, 1166, 2033
BstSCI CCNGG 5 cut(s) 484, 817, 1046, 1059, 1992
BstSFI CTRYAG 3 cut(s) 391, 1794, 1926
BstSLI GKGCMC 1 cut(s) 1276
BstUI CGCG 1 cut(s) 601
BstV1I GCAGC 6 cut(s) 44, 184, 354, 597, 1717, 1940
BstV2I GAAGAC 1 cut(s) 1583
BstXI CCANNNNNNTGG 4 cut(s) 558, 669, 712, 1743
BstZI CGGCCG 1 cut(s) 207
BsuI GTATCC 1 cut(s) 1049
BtgI CCRYGG 4 cut(s) 25, 589, 599, 1033
BtsCI GGATG 4 cut(s) 679, 1339, 1489, 1546
BtsI GCAGTG 4 cut(s) 125, 345, 1507, 1791
BtsIMutI CAGTG 9 cut(s) 125, 301, 345, 1396, 1507, 1548, 1622, 1645, 1791
Cac8I GCNNGC 7 cut(s) 105, 620, 960, 1374, 1455, 1546, 1964
CaiI CAGNNNCTG 2 cut(s) 491, 1550
CfoI GCGC 1 cut(s) 1896
Cfr10I RCCGGY 3 cut(s) 4, 209, 890
Cfr13I GGNCC 6 cut(s) 22, 482, 545, 659, 1527, 1809
Cfr42I CCGCGG 1 cut(s) 602
CseI GACGC 2 cut(s) 74, 2008
Csp6I GTAC 8 cut(s) 8, 605, 776, 813, 941, 1692, 2007, 2025
CspAI ACCGGT 1 cut(s) 890
CspCI CAANNNNNGTGG 2 cut(s) 1505, 1540
CviAII CATG 8 cut(s) 590, 652, 779, 899, 959, 1163, 1935, 2030
CviQI GTAC 8 cut(s) 8, 605, 776, 813, 941, 1692, 2007, 2025
DdeI CTNAG 2 cut(s) 360, 1958
DpnI GATC 5 cut(s) 62, 855, 996, 1388, 1941
DpnII GATC 5 cut(s) 60, 853, 994, 1386, 1939
DriI GACNNNNNGTC 1 cut(s) 1233
EaeI YGGCCR 3 cut(s) 207, 702, 1788
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 2 cut(s) 360, 1346
Eam1105I GACNNNNNGTC 1 cut(s) 1233
EarI CTCTTC 2 cut(s) 360, 1346
EciI GGCGGA 1 cut(s) 254
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 4 cut(s) 324, 589, 1686, 1967
Eco31I GGTCTC 2 cut(s) 1109, 1402
Eco32I GATATC 2 cut(s) 1249, 1910
Eco47I GGWCC 2 cut(s) 482, 545
Eco52I CGGCCG 1 cut(s) 207
Eco57I CTGAAG 1 cut(s) 351
Eco88I CYCGRG 3 cut(s) 512, 765, 1824
EcoNI CCTNNNNNAGG 1 cut(s) 1878
EcoRII CCWGG 5 cut(s) 484, 817, 1046, 1059, 1992
EcoRV GATATC 2 cut(s) 1249, 1910
EcoT14I CCWWGG 4 cut(s) 324, 589, 1686, 1967
EcoT22I ATGCAT 1 cut(s) 762
ErhI CCWWGG 4 cut(s) 324, 589, 1686, 1967
Esp3I CGTCTC 2 cut(s) 1113, 1991
FaeI CATG 8 cut(s) 593, 655, 782, 902, 962, 1166, 1938, 2033
FalI AAGNNNNNCTT 4 cut(s) 407, 439, 1065, 1097
FaqI GGGAC 2 cut(s) 835, 1240
FatI CATG 8 cut(s) 589, 651, 778, 898, 958, 1162, 1934, 2029
FauI CCCGC 1 cut(s) 594
FblI GTMKAC 1 cut(s) 390
FokI GGATG 4 cut(s) 686, 1346, 1496, 1553
FspBI CTAG 5 cut(s) 863, 951, 1007, 1859, 1875
GlaI GCGC 1 cut(s) 1895
GsaI CCCAGC 2 cut(s) 413, 1900
GsuI CTGGAG 1 cut(s) 1095
HaeII RGCGCY 1 cut(s) 1897
HapII CCGG 5 cut(s) 5, 69, 210, 891, 1650
HgaI GACGC 2 cut(s) 74, 2008
HhaI GCGC 1 cut(s) 1896
Hin1I GRCGYC 1 cut(s) 66
Hin1II CATG 8 cut(s) 593, 655, 782, 902, 962, 1166, 1938, 2033
Hin6I GCGC 1 cut(s) 1894
HinP1I GCGC 1 cut(s) 1894
HindIII AAGCTT 2 cut(s) 664, 1280
HinfI GANTC 6 cut(s) 55, 181, 823, 1001, 1077, 1901
HpaII CCGG 5 cut(s) 5, 69, 210, 891, 1650
HphI GGTGA 4 cut(s) 178, 224, 655, 1180
Hpy166II GTNNAC 6 cut(s) 391, 607, 1136, 1171, 1274, 2027
Hpy188I TCNGA 7 cut(s) 60, 186, 428, 932, 1407, 1584, 1843
Hpy188III TCNNGA 8 cut(s) 359, 765, 827, 998, 1112, 1244, 1905, 1982
Hpy8I GTNNAC 6 cut(s) 391, 607, 1136, 1171, 1274, 2027
Hpy99I CGWCG 1 cut(s) 68
HpyCH4III ACNGT 6 cut(s) 296, 373, 940, 1231, 1617, 2089
HpyCH4IV ACGT 3 cut(s) 943, 1106, 1781
HpyF3I CTNAG 2 cut(s) 360, 1958
HpySE526I ACGT 3 cut(s) 943, 1106, 1781
Hsp92I GRCGYC 1 cut(s) 66
Hsp92II CATG 8 cut(s) 593, 655, 782, 902, 962, 1166, 1938, 2033
HspAI GCGC 1 cut(s) 1894
KspI CCGCGG 1 cut(s) 602
Kzo9I GATC 5 cut(s) 60, 853, 994, 1386, 1939
LmnI GCTCC 5 cut(s) 29, 355, 488, 1585, 1652
Lsp1109I GCAGC 6 cut(s) 44, 184, 354, 597, 1717, 1940
LweI GCATC 3 cut(s) 747, 1531, 2075
MaeI CTAG 5 cut(s) 863, 951, 1007, 1859, 1875
MaeII ACGT 3 cut(s) 943, 1106, 1781
MaeIII GTNAC 4 cut(s) 49, 367, 944, 1777
MalI GATC 5 cut(s) 62, 855, 996, 1388, 1941
MbiI CCGCTC 1 cut(s) 107
MboI GATC 5 cut(s) 60, 853, 994, 1386, 1939
MhlI GDGCHC 2 cut(s) 519, 1276
MlsI TGGCCA 2 cut(s) 704, 1790
MluCI AATT 6 cut(s) 538, 1151, 1195, 1356, 1519, 1834
MluNI TGGCCA 2 cut(s) 704, 1790
MlyI GAGTC 2 cut(s) 817, 1010
MmeI TCCRAC 1 cut(s) 1607
Mox20I TGGCCA 2 cut(s) 704, 1790
Mph1103I ATGCAT 1 cut(s) 762
MroXI GAANNNNTTC 1 cut(s) 801
MscI TGGCCA 2 cut(s) 704, 1790
MseI TTAA 5 cut(s) 234, 506, 1287, 1740, 1749
MslI CAYNNNNRTG 6 cut(s) 556, 710, 783, 1434, 1741, 1817
Msp20I TGGCCA 2 cut(s) 704, 1790
MspA1I CMGCKG 1 cut(s) 601
MspI CCGG 5 cut(s) 5, 69, 210, 891, 1650
MspR9I CCNGG 5 cut(s) 486, 819, 1048, 1061, 1994
Mva1269I GAATGC 1 cut(s) 760
MvaI CCWGG 5 cut(s) 486, 819, 1048, 1061, 1994
MvnI CGCG 1 cut(s) 601
NcoI CCATGG 1 cut(s) 589
NdeII GATC 5 cut(s) 60, 853, 994, 1386, 1939
NlaIII CATG 8 cut(s) 593, 655, 782, 902, 962, 1166, 1938, 2033
NlaIV GGNNCC 4 cut(s) 23, 382, 547, 660
NsiI ATGCAT 1 cut(s) 762
NspI RCATGY 5 cut(s) 655, 902, 962, 1166, 2033
OliI CACNNNNGTG 1 cut(s) 556
PaeI GCATGC 1 cut(s) 962
PaeR7I CTCGAG 2 cut(s) 512, 765
PciI ACATGT 3 cut(s) 651, 1162, 2029
PctI GAATGC 1 cut(s) 760
PdmI GAANNNNTTC 1 cut(s) 801
PfeI GAWTC 4 cut(s) 55, 181, 1077, 1901
PinAI ACCGGT 1 cut(s) 890
Ple19I CGATCG 1 cut(s) 63
PleI GAGTC 2 cut(s) 817, 1009
PpsI GAGTC 2 cut(s) 817, 1009
PscI ACATGT 3 cut(s) 651, 1162, 2029
PshBI ATTAAT 1 cut(s) 1287
PsiI TTATAA 1 cut(s) 1398
Psp6I CCWGG 5 cut(s) 484, 817, 1046, 1059, 1992
PspFI CCCAGC 2 cut(s) 409, 1896
PspGI CCWGG 5 cut(s) 484, 817, 1046, 1059, 1992
PspN4I GGNNCC 4 cut(s) 23, 382, 547, 660
PspPI GGNCC 6 cut(s) 22, 482, 545, 659, 1527, 1809
PspXI VCTCGAGB 1 cut(s) 512
PstI CTGCAG 2 cut(s) 1798, 1930
PstNI CAGNNNCTG 2 cut(s) 491, 1550
PvuI CGATCG 1 cut(s) 63
RsaI GTAC 8 cut(s) 9, 606, 777, 814, 942, 1693, 2008, 2026
RsaNI GTAC 8 cut(s) 8, 605, 776, 813, 941, 1692, 2007, 2025
RseI CAYNNNNRTG 6 cut(s) 556, 710, 783, 1434, 1741, 1817
SacII CCGCGG 1 cut(s) 602
SaqAI TTAA 5 cut(s) 234, 506, 1287, 1740, 1749
Sau3AI GATC 5 cut(s) 60, 853, 994, 1386, 1939
Sau96I GGNCC 6 cut(s) 22, 482, 545, 659, 1527, 1809
SchI GAGTC 2 cut(s) 817, 1010
ScrFI CCNGG 5 cut(s) 486, 819, 1048, 1061, 1994
SduI GDGCHC 2 cut(s) 519, 1276
SfaNI GCATC 3 cut(s) 747, 1531, 2075
SfcI CTRYAG 3 cut(s) 391, 1794, 1926
Sfr274I CTCGAG 2 cut(s) 512, 765
Sfr303I CCGCGG 1 cut(s) 602
SgrBI CCGCGG 1 cut(s) 602
SinI GGWCC 2 cut(s) 482, 545
SlaI CTCGAG 2 cut(s) 512, 765
SmiMI CAYNNNNRTG 6 cut(s) 556, 710, 783, 1434, 1741, 1817
SmlI CTYRAG 4 cut(s) 512, 765, 998, 1980
SmoI CTYRAG 4 cut(s) 512, 765, 998, 1980
SphI GCATGC 1 cut(s) 962
Sse9I AATT 6 cut(s) 538, 1151, 1195, 1356, 1519, 1834
SspI AATATT 1 cut(s) 747
SspMI CTAG 5 cut(s) 863, 951, 1007, 1859, 1875
StyD4I CCNGG 5 cut(s) 484, 817, 1046, 1059, 1992
StyI CCWWGG 4 cut(s) 324, 589, 1686, 1967
TaaI ACNGT 6 cut(s) 296, 373, 940, 1231, 1617, 2089
TaiI ACGT 3 cut(s) 946, 1109, 1784
TaqI TCGA 3 cut(s) 63, 513, 766
TaqII GACCGA 2 cut(s) 431, 1426
TasI AATT 6 cut(s) 538, 1151, 1195, 1356, 1519, 1834
TatI WGTACW 2 cut(s) 775, 2024
TfiI GAWTC 4 cut(s) 55, 181, 1077, 1901
Tru1I TTAA 5 cut(s) 234, 506, 1287, 1740, 1749
Tru9I TTAA 5 cut(s) 234, 506, 1287, 1740, 1749
TscAI CASTG 9 cut(s) 132, 301, 352, 1396, 1507, 1555, 1622, 1645, 1798
TseI GCWGC 6 cut(s) 32, 197, 342, 585, 1705, 1928
TspDTI ATGAA 7 cut(s) 302, 1200, 1353, 1430, 1587, 1659, 2001
TspGWI ACGGA 1 cut(s) 1022
TspRI CASTG 9 cut(s) 132, 301, 352, 1396, 1507, 1555, 1622, 1645, 1798
VneI GTGCAC 1 cut(s) 1272
VpaK11BI GGWCC 2 cut(s) 482, 545
VspI ATTAAT 1 cut(s) 1287
XagI CCTNNNNNAGG 1 cut(s) 1878
XapI RAATTY 1 cut(s) 1519
XceI RCATGY 5 cut(s) 655, 902, 962, 1166, 2033
XcmI CCANNNNNNNNNTGG 1 cut(s) 1380
XhoI CTCGAG 2 cut(s) 512, 765
XmiI GTMKAC 1 cut(s) 390
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 5 cut(s) 863, 951, 1007, 1859, 1875
Zsp2I ATGCAT 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.