Rorug05G0290500

leucine-rich repeat extensin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000455
Physical Location & Seq
Forward (+)
33377760 .. 33380617
2858 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0290500.1

Sequence Viewer

Length: 1464 bp
ATGATTTCCAGTCTTCCACATTTCTCTACAACTTATTTTAGTTATAACCAACTCATCAAAGAAAACCATTACATATATATACCCTTCTCTCTAAAACTCGTTACAGAAATCAAATTAAACCCCTTCAAGAAACCAAGACTCGTTTCAAAAACCATGGCGGACGAAAGCGGCAGCAGAGAAGCTTTGTTAGCCAACCGGAGAAAGAACATGTTCCAACGCTGCGTTTCGCACGCCCACGACGAGTTGAAGAGCTTCCGGTCCTATCTCCGGTGGATGTGCGTCGACCAGTCCAACGTCTGGAGATTGTGCCTCTCTTGGAGCGTTTTCGTTGTTTTTACGATCGTCGTTCCGGCGGTGTCTCATTTTGTTTTCGCCTGCTCCACCTGCGACGGCAAGCACAAGAGGCCGTACGACAGCGTCGTGCAGCTGTCGCTGAGCGGCGTGGCGACGTTGTCGTTTGTGTGCCTGTCGTCGTTTGTGAGGAAGTATGGGCTGAAGAGGTTTCTGTTTTTTGATAAGCTTTACGATGAGAGCGAGACGGTCAGGAGGGGATACACCGCACAGCTCAATAGATCTTTGAAGCTTCTCAGCTGCTTTGTCATACCATGCTTTGTTGCCGAGAGTGTATACAAGATATGGTGGTACTCATCCGAAGCCTCGCAGATTCCTTATGTGGGCAATATTTACGCGAGTGCCGCAATGGCATGCATAATGGAGCTATGCTCCTGGCTCTATCGCACGACCGTGATTTTCCTCGTGTGTGTTCTCTTCCGTCTCATATGCTACCTTCAAATCCTACGGCTACAAGACTTTGCCACAATGTTCGAAGTGGACTCTGATGTCGGGTCAGTATTATCGGAGCACCTTCGGATTCGAAGGCACCTGAGGATCATAAGCCACAGGTGCCGCGATTTCGTATTGTGGAAACTCATTTTGGTCACAGGGACCCAATTTGCTCTGTTGCTCATCACAACCAGTTCCAGTGCCATTGCCAACCTTGATATTTGCACAGCTGGAGAGCTTCTGTTTTGCTCCATAACTTTAGTTACCGGGCTCCTCATCGTGCTGCGCAGTGCAACCAAAATCACACACAAGGCGCAAGCAGTCACATGTCTTGCTGCCAAATGGCATGTCTGTGCCACATTAGATTCGTTTGATGCAACAACGGCTCAGATCGCCAGTAGTGGCCGAGTGTTCCGTGCAGAATCCGATAACGATGAGACTGAGGACGAGGCTGAGGATGAAGAAGATGAATTGGACAACAGCAAGTTGATACCATCATATGCATATAGTACCATCTCTTATCAGAAAAGACAAGCTCTAGTGACATATTTCGAGAACAACAGAGCCGGCATTACTGTTTACGGGTTTACATTGGACAGGACTACGCTACACATGTTATTTATGATTGAATTTTCATTAATTCTCTGGTTGTTGGGGAAGACCATTAATGGAATTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMA

Protein Analysis

487

Amino Acids

55.68

Weight (kDa)

8.56

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3537 PF12056 80 - 470 1.5e-169 Protein of unknown function (DUF3537)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G51090 AT4G16380 AT4G16380 AT4G16380 AT4G16380
fragaria_vesca FvH4_3g00430 FvH4_3g00441 FvH4_3g00443 FvH4_3g00445
malus_domestica MD05G1360500.v1.1 MD08G1234400.v1.1 MD10G1337500.v1.1 MD10G1337700.v1.1 MD10G1337900.v1.1 MD10G1338100.v1.1
prunus_persica Prupe.4G004900_v2.0.a1 Prupe.4G004900_v2.0.a1 Prupe.4G005100_v2.0.a1
pyrus_communis pycom05g32730 pycom10g28690 pycom10g28710 pycom10g28730 pycom10g28760 pycom10g28770
rosa_chinensis RchiOBHm_Chr1g0328811 RchiOBHm_Chr1g0347291 RchiOBHm_Chr1g0347351 RchiOBHm_Chr2g0102091 RchiOBHm_Chr5g0000621
rosa_laevigata RLG00000005325 RLG00000017130 RLG00000028756 RLG00000028757 RLG00000028759 RLG00000028763 RLG00000030882
rosa_multiflora Rmu_co8114210.1_g000001 Rmu_co8238747.1_g000001 Rmu_co8428345.1_g000001 Rmu_sc0000157.1_g000022 Rmu_sc0000157.1_g000026 Rmu_sc0002705.1_g000026 Rmu_sc0002705.1_g000035 Rmu_sc0004156.1_g000004 Rmu_sc0008178.1_g000003 Rmu_sc0012465.1_g000001
rosa_roxburghii Rroxscaffold_1G00075580 Rroxscaffold_2G00140790 Rroxscaffold_3G00273490 Rroxscaffold_4G00307890 Rroxscaffold_4G00307920 Rroxscaffold_4G00307930
rosa_rugosa Rorug01G0186000 Rorug02G0104400.1 Rorug04G0385400 Rorug04G0385400 Rorug05G0290500 Rorug06G0427900
rosa_samantha Rh1AG094800 Rh1AG203100 Rh1AG203500 Rh1AG203900 Rh1BG169300 Rh1BG169500 Rh1CG188400 Rh1CG188800 Rh1CG189000 Rh1DG098100 Rh1DG199800 Rh1DG199900 Rh2AG152900 Rh2BG158600 Rh2BG158800 Rh2CG158000 Rh2DG158500 Rh5AG005200 Rh5BG006800 Rh5CG005600 Rh5DG005500 Rh7AG027500 Rh7BG026700 Rh7CG028600 Rh7DG028200
rosa_wichuraiana Rw1G007400 Rw1G017040 Rw1G017060 Rw1G017080 Rw1G017090 Rw2G011910 Rw2G011920 Rw5G000510 Rw7G002210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 45
AarI CACCTGC 1 cut(s) 392
AasI GACNNNNNNGTC 1 cut(s) 839
Acc16I TGCGCA 1 cut(s) 1070
Acc36I ACCTGC 1 cut(s) 392
AccB1I GGYRCC 2 cut(s) 879, 903
AccB7I CCANNNNNTGG 1 cut(s) 297
AccBSI CCGCTC 1 cut(s) 438
AccI GTMKAC 2 cut(s) 282, 627
AccII CGCG 2 cut(s) 689, 909
AciI CCGC 7 cut(s) 158, 168, 353, 438, 558, 696, 907
AclWI GGATC 1 cut(s) 896
AcoI YGGCCR 1 cut(s) 1186
AcsI RAATTY 2 cut(s) 1412, 1455
AcuI CTGAAG 1 cut(s) 515
AfaI GTAC 3 cut(s) 410, 644, 1294
AfiI CCNNNNNNNGG 3 cut(s) 267, 297, 674
AflIII ACRYGT 3 cut(s) 207, 1109, 1395
AgsI TTSAA 6 cut(s) 127, 147, 247, 580, 791, 1412
AjnI CCWGG 1 cut(s) 725
AjuI GAANNNNNNNTTGG 4 cut(s) 127, 159, 917, 949
AleI CACNNNNGTG 1 cut(s) 743
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 4 cut(s) 363, 530, 779, 1214
AlwI GGATC 1 cut(s) 896
AoxI GGCC 2 cut(s) 404, 1186
ApeKI GCWGC 6 cut(s) 171, 219, 424, 591, 1066, 1118
ApoI RAATTY 2 cut(s) 1412, 1455
ArsI GACNNNNNNTTYG 2 cut(s) 1116, 1148
AseI ATTAAT 2 cut(s) 1421, 1449
Asp700I GAANNNNTTC 2 cut(s) 209, 251
AspLEI GCGC 2 cut(s) 1071, 1099
AspS9I GGNCC 2 cut(s) 258, 945
AsuC2I CCSGG 1 cut(s) 1051
AsuII TTCGAA 2 cut(s) 825, 874
AvaII GGWCC 2 cut(s) 258, 945
AxyI CCTNAGG 1 cut(s) 884
BanI GGYRCC 2 cut(s) 879, 903
BanII GRGCYC 1 cut(s) 1056
BauI CACGAG 1 cut(s) 755
BbsI GAAGAC 2 cut(s) 5, 1448
Bbv12I GWGCWC 1 cut(s) 864
BbvCI CCTCAGC 1 cut(s) 1236
BbvI GCAGC 6 cut(s) 183, 206, 436, 578, 1053, 1105
BccI CCATC 2 cut(s) 1285, 1304
BceAI ACGGC 4 cut(s) 391, 406, 815, 1182
BciT130I CCWGG 1 cut(s) 727
BciVI GTATCC 1 cut(s) 545
BcnI CCSGG 1 cut(s) 1051
BcoDI GTCTC 4 cut(s) 363, 530, 779, 1214
BfaI CTAG 1 cut(s) 1322
BfuAI ACCTGC 1 cut(s) 392
BfuI GTATCC 1 cut(s) 545
BglI GCCNNNNNGGC 1 cut(s) 701
BglII AGATCT 1 cut(s) 572
BlpI GCTNAGC 1 cut(s) 434
Bme1390I CCNGG 2 cut(s) 727, 1051
Bme18I GGWCC 2 cut(s) 258, 945
BmgT120I GGNCC 2 cut(s) 258, 945
BmiI GGNNCC 5 cut(s) 881, 905, 946, 947, 1055
BmrFI CCNGG 2 cut(s) 727, 1051
BmsI GCATC 1 cut(s) 1147
BpiI GAAGAC 2 cut(s) 5, 1448
BplI GAGNNNNNCTC 2 cut(s) 707, 739
BpmI CTGGAG 2 cut(s) 319, 1035
Bpu10I CCTNAGC 1 cut(s) 1236
Bpu1102I GCTNAGC 1 cut(s) 434
Bpu14I TTCGAA 2 cut(s) 825, 874
BpuMI CCSGG 1 cut(s) 1051
BsaJI CCNNGG 1 cut(s) 153
BsaWI WCCGGW 3 cut(s) 195, 255, 267
Bsc4I CCNNNNNNNGG 3 cut(s) 267, 297, 674
Bse118I RCCGGY 1 cut(s) 1349
Bse1I ACTGG 5 cut(s) 9, 286, 975, 981, 1179
Bse21I CCTNAGG 1 cut(s) 884
Bse3DI GCAATG 2 cut(s) 705, 987
BseBI CCWGG 1 cut(s) 727
BseDI CCNNGG 1 cut(s) 153
BseGI GGATG 3 cut(s) 279, 647, 1246
BseLI CCNNNNNNNGG 3 cut(s) 267, 297, 674
BseMI GCAATG 2 cut(s) 705, 987
BseMII CTCAG 6 cut(s) 425, 601, 875, 1184, 1215, 1227
BseNI ACTGG 5 cut(s) 9, 286, 975, 981, 1179
BseRI GAGGAG 1 cut(s) 1046
BseXI GCAGC 6 cut(s) 183, 206, 436, 578, 1053, 1105
BsgI GTGCAG 2 cut(s) 443, 1221
Bsh1236I CGCG 2 cut(s) 689, 909
Bsh1285I CGRYCG 2 cut(s) 342, 744
BshFI GGCC 2 cut(s) 406, 1188
BshNI GGYRCC 2 cut(s) 879, 903
BsiEI CGRYCG 2 cut(s) 342, 744
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 6 cut(s) 196, 256, 268, 350, 1050, 1350
BsiWI CGTACG 1 cut(s) 408
BslFI GGGAC 1 cut(s) 958
BslI CCNNNNNNNGG 3 cut(s) 267, 297, 674
BsmAI GTCTC 4 cut(s) 363, 530, 779, 1214
BsmBI CGTCTC 2 cut(s) 530, 779
BsmFI GGGAC 1 cut(s) 958
BsnI GGCC 2 cut(s) 406, 1188
Bsp119I TTCGAA 2 cut(s) 825, 874
Bsp1286I GDGCHC 2 cut(s) 864, 1056
Bsp143I GATC 4 cut(s) 339, 572, 888, 1173
Bsp1720I GCTNAGC 1 cut(s) 434
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 7 cut(s) 158, 168, 353, 438, 558, 696, 907
BspANI GGCC 2 cut(s) 406, 1188
BspCNI CTCAG 6 cut(s) 426, 600, 876, 1183, 1216, 1228
BspFNI CGCG 2 cut(s) 689, 909
BspLI GGNNCC 5 cut(s) 881, 905, 946, 947, 1055
BspMI ACCTGC 1 cut(s) 392
BspPI GGATC 1 cut(s) 896
BspQI GCTCTTC 1 cut(s) 242
BspT104I TTCGAA 2 cut(s) 825, 874
BspT107I GGYRCC 2 cut(s) 879, 903
BsrBI CCGCTC 1 cut(s) 438
BsrDI GCAATG 2 cut(s) 705, 987
BsrFI RCCGGY 1 cut(s) 1349
BsrI ACTGG 5 cut(s) 9, 286, 975, 981, 1179
BssAI RCCGGY 1 cut(s) 1349
BssECI CCNNGG 1 cut(s) 153
BssMI GATC 4 cut(s) 339, 572, 888, 1173
BssNAI GTATAC 1 cut(s) 628
BssSI CACGAG 1 cut(s) 755
BssT1I CCWWGG 1 cut(s) 153
Bst1107I GTATAC 1 cut(s) 628
Bst2BI CACGAG 1 cut(s) 755
Bst2UI CCWGG 1 cut(s) 727
Bst4CI ACNGT 3 cut(s) 541, 745, 1360
Bst6I CTCTTC 3 cut(s) 242, 491, 773
BstBI TTCGAA 2 cut(s) 825, 874
BstC8I GCNNGC 6 cut(s) 231, 376, 395, 706, 1101, 1351
BstDEI CTNAG 6 cut(s) 434, 587, 884, 1170, 1224, 1236
BstDSI CCRYGG 1 cut(s) 153
BstF5I GGATG 3 cut(s) 279, 647, 1246
BstFNI CGCG 2 cut(s) 689, 909
BstHHI GCGC 2 cut(s) 1071, 1099
BstKTI GATC 4 cut(s) 342, 575, 891, 1176
BstMAI GTCTC 4 cut(s) 363, 530, 779, 1214
BstMBI GATC 4 cut(s) 339, 572, 888, 1173
BstMCI CGRYCG 2 cut(s) 342, 744
BstMWI GCNNNNNNNGC 9 cut(s) 188, 384, 403, 430, 695, 701, 903, 1166, 1175
BstNI CCWGG 1 cut(s) 727
BstNSI RCATGY 5 cut(s) 211, 708, 1113, 1133, 1399
BstSCI CCNGG 2 cut(s) 725, 1049
BstUI CGCG 2 cut(s) 689, 909
BstV1I GCAGC 6 cut(s) 183, 206, 436, 578, 1053, 1105
BstV2I GAAGAC 2 cut(s) 5, 1448
BstX2I RGATCY 1 cut(s) 572
BstYI RGATCY 1 cut(s) 572
BstZ17I GTATAC 1 cut(s) 628
Bsu36I CCTNAGG 1 cut(s) 884
BsuI GTATCC 1 cut(s) 545
BsuRI GGCC 2 cut(s) 406, 1188
BtgI CCRYGG 1 cut(s) 153
BtsCI GGATG 3 cut(s) 279, 647, 1246
BtsI GCAGTG 1 cut(s) 1078
BtsIMutI CAGTG 2 cut(s) 988, 1078
BveI ACCTGC 1 cut(s) 392
Cac8I GCNNGC 6 cut(s) 231, 376, 395, 706, 1101, 1351
CfoI GCGC 2 cut(s) 1071, 1099
Cfr10I RCCGGY 1 cut(s) 1349
Cfr13I GGNCC 2 cut(s) 258, 945
CseI GACGC 2 cut(s) 268, 406
Csp6I GTAC 3 cut(s) 409, 643, 1293
CviAII CATG 7 cut(s) 154, 208, 606, 705, 1110, 1130, 1396
CviQI GTAC 3 cut(s) 409, 643, 1293
DdeI CTNAG 6 cut(s) 434, 587, 884, 1170, 1224, 1236
DpnI GATC 4 cut(s) 341, 574, 890, 1175
DpnII GATC 4 cut(s) 339, 572, 888, 1173
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 1 cut(s) 1186
Eam1104I CTCTTC 3 cut(s) 242, 491, 773
EarI CTCTTC 3 cut(s) 242, 491, 773
EciI GGCGGA 1 cut(s) 173
Eco130I CCWWGG 1 cut(s) 153
Eco24I GRGCYC 1 cut(s) 1056
Eco47I GGWCC 2 cut(s) 258, 945
Eco57I CTGAAG 1 cut(s) 515
Eco81I CCTNAGG 1 cut(s) 884
EcoO109I RGGNCCY 1 cut(s) 945
EcoRII CCWGG 1 cut(s) 725
EcoT14I CCWWGG 1 cut(s) 153
EcoT22I ATGCAT 2 cut(s) 710, 1288
EcoT38I GRGCYC 1 cut(s) 1056
ErhI CCWWGG 1 cut(s) 153
Esp3I CGTCTC 2 cut(s) 530, 779
FaeI CATG 7 cut(s) 157, 211, 609, 708, 1113, 1133, 1399
FaqI GGGAC 1 cut(s) 958
FatI CATG 7 cut(s) 153, 207, 605, 704, 1109, 1129, 1395
FauNDI CATATG 2 cut(s) 779, 1282
FblI GTMKAC 2 cut(s) 282, 627
FokI GGATG 3 cut(s) 286, 634, 1253
FriOI GRGCYC 1 cut(s) 1056
FspBI CTAG 1 cut(s) 1322
FspI TGCGCA 1 cut(s) 1070
GlaI GCGC 2 cut(s) 1070, 1098
GsuI CTGGAG 2 cut(s) 319, 1035
HaeIII GGCC 2 cut(s) 406, 1188
HapII CCGG 6 cut(s) 196, 256, 268, 350, 1050, 1350
HgaI GACGC 2 cut(s) 268, 406
HhaI GCGC 2 cut(s) 1071, 1099
Hin1II CATG 7 cut(s) 157, 211, 609, 708, 1113, 1133, 1399
Hin6I GCGC 2 cut(s) 1069, 1097
HinP1I GCGC 2 cut(s) 1069, 1097
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 3 cut(s) 180, 518, 581
HinfI GANTC 6 cut(s) 138, 664, 833, 871, 1148, 1205
HpaII CCGG 6 cut(s) 196, 256, 268, 350, 1050, 1350
Hpy166II GTNNAC 5 cut(s) 283, 628, 832, 1363, 1371
Hpy188I TCNGA 7 cut(s) 652, 838, 859, 870, 1173, 1210, 1308
Hpy188III TCNNGA 4 cut(s) 127, 298, 544, 1336
Hpy8I GTNNAC 5 cut(s) 283, 628, 832, 1363, 1371
Hpy99I CGWCG 7 cut(s) 242, 284, 347, 392, 422, 451, 475
HpyAV CCTTC 5 cut(s) 94, 133, 797, 870, 875
HpyCH4III ACNGT 3 cut(s) 541, 745, 1360
HpyCH4IV ACGT 2 cut(s) 294, 449
HpyCH4V TGCA 7 cut(s) 424, 708, 1008, 1076, 1160, 1202, 1286
HpyF10VI GCNNNNNNNGC 9 cut(s) 188, 384, 403, 430, 695, 701, 903, 1166, 1175
HpyF3I CTNAG 6 cut(s) 434, 587, 884, 1170, 1224, 1236
HpySE526I ACGT 2 cut(s) 294, 449
Hsp92II CATG 7 cut(s) 157, 211, 609, 708, 1113, 1133, 1399
HspAI GCGC 2 cut(s) 1069, 1097
KflI GGGWCCC 1 cut(s) 945
KroI GCCGGC 1 cut(s) 1349
KroNI GCCGGC 1 cut(s) 1351
Kzo9I GATC 4 cut(s) 339, 572, 888, 1173
LguI GCTCTTC 1 cut(s) 242
LmnI GCTCC 7 cut(s) 318, 383, 715, 728, 859, 1037, 1059
Lsp1109I GCAGC 6 cut(s) 183, 206, 436, 578, 1053, 1105
LweI GCATC 1 cut(s) 1147
MaeI CTAG 1 cut(s) 1322
MaeII ACGT 2 cut(s) 294, 449
MaeIII GTNAC 5 cut(s) 100, 937, 1045, 1105, 1324
MalI GATC 4 cut(s) 341, 574, 890, 1175
MbiI CCGCTC 1 cut(s) 438
MboI GATC 4 cut(s) 339, 572, 888, 1173
MboII GAAGA 7 cut(s) 5, 259, 508, 760, 1256, 1259, 1453
MflI RGATCY 1 cut(s) 572
MhlI GDGCHC 2 cut(s) 864, 1056
MluCI AATT 6 cut(s) 113, 950, 1253, 1412, 1422, 1455
MlyI GAGTC 2 cut(s) 132, 827
MmeI TCCRAC 2 cut(s) 238, 315
Mph1103I ATGCAT 2 cut(s) 710, 1288
MroNI GCCGGC 1 cut(s) 1349
MroXI GAANNNNTTC 2 cut(s) 209, 251
MseI TTAA 4 cut(s) 116, 1421, 1449, 1462
MslI CAYNNNNRTG 2 cut(s) 743, 1134
MspA1I CMGCKG 3 cut(s) 427, 591, 1013
MspI CCGG 6 cut(s) 196, 256, 268, 350, 1050, 1350
MspR9I CCNGG 2 cut(s) 727, 1051
MvaI CCWGG 1 cut(s) 727
MvnI CGCG 2 cut(s) 689, 909
MwoI GCNNNNNNNGC 9 cut(s) 188, 384, 403, 430, 695, 701, 903, 1166, 1175
NaeI GCCGGC 1 cut(s) 1351
NciI CCSGG 1 cut(s) 1051
NcoI CCATGG 1 cut(s) 153
NdeI CATATG 2 cut(s) 779, 1282
NdeII GATC 4 cut(s) 339, 572, 888, 1173
NgoMIV GCCGGC 1 cut(s) 1349
NlaIII CATG 7 cut(s) 157, 211, 609, 708, 1113, 1133, 1399
NlaIV GGNNCC 5 cut(s) 881, 905, 946, 947, 1055
NmeAIII GCCGAG 2 cut(s) 643, 1214
NmuCI GTSAC 3 cut(s) 937, 1105, 1324
NsbI TGCGCA 1 cut(s) 1070
NsiI ATGCAT 2 cut(s) 710, 1288
NspI RCATGY 5 cut(s) 211, 708, 1113, 1133, 1399
NspV TTCGAA 2 cut(s) 825, 874
OliI CACNNNNGTG 1 cut(s) 743
PaeI GCATGC 1 cut(s) 708
PaqCI CACCTGC 1 cut(s) 392
PciI ACATGT 3 cut(s) 207, 1109, 1395
PciSI GCTCTTC 1 cut(s) 242
PcsI WCGNNNNNNNCGW 3 cut(s) 237, 417, 531
PdiI GCCGGC 1 cut(s) 1351
PdmI GAANNNNTTC 2 cut(s) 209, 251
PfeI GAWTC 4 cut(s) 664, 871, 1148, 1205
Pfl23II CGTACG 1 cut(s) 408
PflFI GACNNNGTC 2 cut(s) 416, 451
PflMI CCANNNNNTGG 1 cut(s) 297
Ple19I CGATCG 1 cut(s) 342
PleI GAGTC 2 cut(s) 132, 827
PpsI GAGTC 2 cut(s) 132, 827
PpuMI RGGWCCY 1 cut(s) 945
PscI ACATGT 3 cut(s) 207, 1109, 1395
PshBI ATTAAT 2 cut(s) 1421, 1449
PsiI TTATAA 1 cut(s) 45
Psp5II RGGWCCY 1 cut(s) 945
Psp6I CCWGG 1 cut(s) 725
PspGI CCWGG 1 cut(s) 725
PspLI CGTACG 1 cut(s) 408
PspN4I GGNNCC 5 cut(s) 881, 905, 946, 947, 1055
PspPI GGNCC 2 cut(s) 258, 945
PspPPI RGGWCCY 1 cut(s) 945
PsuI RGATCY 1 cut(s) 572
PsyI GACNNNGTC 2 cut(s) 416, 451
PvuI CGATCG 1 cut(s) 342
PvuII CAGCTG 3 cut(s) 427, 591, 1013
RsaI GTAC 3 cut(s) 410, 644, 1294
RsaNI GTAC 3 cut(s) 409, 643, 1293
RseI CAYNNNNRTG 2 cut(s) 743, 1134
SalI GTCGAC 1 cut(s) 281
SapI GCTCTTC 1 cut(s) 242
SaqAI TTAA 4 cut(s) 116, 1421, 1449, 1462
Sau3AI GATC 4 cut(s) 339, 572, 888, 1173
Sau96I GGNCC 2 cut(s) 258, 945
SchI GAGTC 2 cut(s) 132, 827
ScrFI CCNGG 2 cut(s) 727, 1051
SduI GDGCHC 2 cut(s) 864, 1056
SfaNI GCATC 1 cut(s) 1147
SfuI TTCGAA 2 cut(s) 825, 874
SinI GGWCC 2 cut(s) 258, 945
SmiMI CAYNNNNRTG 2 cut(s) 743, 1134
SphI GCATGC 1 cut(s) 708
Sse9I AATT 6 cut(s) 113, 950, 1253, 1412, 1422, 1455
SsiI CCGC 7 cut(s) 158, 168, 353, 438, 558, 696, 907
SspI AATATT 1 cut(s) 682
SspMI CTAG 1 cut(s) 1322
StyD4I CCNGG 2 cut(s) 725, 1049
StyI CCWWGG 1 cut(s) 153
TaaI ACNGT 3 cut(s) 541, 745, 1360
TaiI ACGT 2 cut(s) 297, 452
TaqI TCGA 4 cut(s) 282, 825, 874, 1335
TasI AATT 6 cut(s) 113, 950, 1253, 1412, 1422, 1455
TauI GCSGC 4 cut(s) 171, 441, 698, 909
TfiI GAWTC 4 cut(s) 664, 871, 1148, 1205
Tru1I TTAA 4 cut(s) 116, 1421, 1449, 1462
Tru9I TTAA 4 cut(s) 116, 1421, 1449, 1462
TscAI CASTG 2 cut(s) 988, 1078
TseFI GTSAC 3 cut(s) 937, 1105, 1324
TseI GCWGC 6 cut(s) 171, 219, 424, 591, 1066, 1118
Tsp45I GTSAC 3 cut(s) 937, 1105, 1324
TspDTI ATGAA 3 cut(s) 1257, 1266, 1407
TspGWI ACGGA 2 cut(s) 761, 1187
TspRI CASTG 2 cut(s) 988, 1078
Tth111I GACNNNGTC 2 cut(s) 416, 451
Van91I CCANNNNNTGG 1 cut(s) 297
VpaK11BI GGWCC 2 cut(s) 258, 945
VspI ATTAAT 2 cut(s) 1421, 1449
XapI RAATTY 2 cut(s) 1412, 1455
XceI RCATGY 5 cut(s) 211, 708, 1113, 1133, 1399
XmiI GTMKAC 2 cut(s) 282, 627
XmnI GAANNNNTTC 2 cut(s) 209, 251
XspI CTAG 1 cut(s) 1322
Zsp2I ATGCAT 2 cut(s) 710, 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.