Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000576

Physical Location & Seq

Genomic Coordinates Forward (+)

66249963 .. 66274372

Gene Structure 24410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG416900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGCGGTGATGGCAGATCTTGGTCTGCTTGTTCTGTTCTTCATTGCGTTGTGGGACGCTGAGGCGGTGTTGAGTTCAGGGGTTGCAGGCGTTGTTGTTTCTGCGCCCAAGCTCGACGGTGACATGAATGAGGCGACCTCCAGGAGGGAGTTGGCATCTAAATGGCAACTGAGCAGCGATCCGGTCTTGGTTTGGTCAAGATCGAATCGGAAAGGTAGATTCCGATCGAGTCCATGGGAAGATGTTCTCTGGCGTGCAGGCGATCTTGATCTCCCGGACGGTGACAGTGCGCGGGTTTGCTCGGACGCAGGGACTATTGCTTCTGCTGGTGGTGCTCATCGGTATATCGACGGTCAGTACGGAAGTAAGAGTGGCTGTCAATTTGCACCTGGGATTCCGGAGCTGAGGGAGGATCTGCTTTTCTTCTACCCGGGTAGATCGTTGGTAGGGATTATGGTGCGTCTCTGCGCATCGGAGAAGCTTACCTTTGATGGTGAGGATGCTTGGTGCAACGACGGGCCCTACCACGTCTTTGGTGGTCGCGGCTTGCTGGTTGGCGGCGGCGGTGTGCAGGTCCGGTGGGGTGGATCCTGTGGGGTGCTCTTAGCAATTTTTGCTCGGGCCCTCTGGGCTTCACTCTTTTCTGTCGACTTAGGCTGGGCCTTCAGTATCAGCTCTTTTCTTTTGATCGCAAAACATGTGAATGCATTCGATCGACAAAACCAGCAAAACAGACCCAAGCTCCACTGCAACTCTTCGCTCTTCGCCCTCCCCCAAGCCACCGCAGAACAGATCGATTCATTCGATCCCCAAAACCAGCAAAACAGACCCAAGCGACCGCAGCTCTTCGCTCTTCACCATCCCCCAAGCCATCGCAGCTCCACCGCAGCTCTTCGCTCGTCGCCCTCCCCCAAGCCACCACAGAACAGATCGATTCATTCGATCCCCAAAACCAGCAAAACAGACCCAGCCACCGCAGCTCTTCGCTCTTCGCCCTCCCCCAAGCCACCGCAGCTCTTCGCTCTTCGTACTCCCCCAAGCCACCGCAGCTCCACCGCACCTCTTCGGCCTTCGCCTTCCCTCAAGCCACCACAGCTCCACCGCAGGTCTTCGCTCTCCGCCCTCCCCCAAGCCACCGTGTCTCTGCCTCAGACTCCCTCTGCTCCGTGCCTCTGCCTCGAAACGTTGAAGCCTGAAGAAGTTACTGGCATTGTGAATGACTTTAACGAACCTGGAACACTTGCTCCAACTGGGTTGTATCTTGGAGGCACTAAGTACATGGTGATCCAAGGAGAGCCTGGAGCTGTCATTAGAGGGAAGAAGGGCCCTGGAGGTGTTACTGTGAAGAAGACTACTCTGGCATTGCTCATTGGGATCTATCATGAGCCAATGACTCCCGGACAATGCAACATGATTGTGGAGAGGCTTGGCGATTATCTGGTTGAGCAGGTTGTGGTGCAGATGGATGTGGCAAATGAGGCTATCCGGTCTTCACCTCCACCGCAGCCCCGGCCCACCAGCCCACCGACGATTCTCCGCCGCTCAGAAACCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0003785 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005938 GO:0008064 GO:0008092 GO:0008104 GO:0008150 GO:0009987 GO:0010639 GO:0015629 GO:0016043 GO:0030832 GO:0030833 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032507 GO:0032535 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0034613 GO:0042989 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0045185 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051179 GO:0051235 GO:0051493 GO:0051494 GO:0051641 GO:0051651 GO:0065007 GO:0065008 GO:0070727 GO:0071840 GO:0071944 GO:0090066 GO:0099568 GO:0110053 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

ko04013 ko04015 ko04810 ko05131 ko05132 map04013 map04015 map04810 map05131 map05132

Pfam Domains

Protein Families

Profilin

Protein Analysis

518

Amino Acids

55.85

Weight (kDa)

9.18

Isoelectric Point (pI)

60.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Profilin	PF00235	395 - 483	1.9e-25	Profilin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000576)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0496101
rosa_laevigata	RLG00000001000 RLG00000003686 RLG00000004631 RLG00000004905 RLG00000005430 RLG00000005713 RLG00000007389 RLG00000011894 RLG00000014857 RLG00000017726 RLG00000020028 RLG00000020869 RLG00000021046 RLG00000023109 RLG00000026629 RLG00000027568 RLG00000027741 RLG00000027989 RLG00000029466 RLG00000032523 RLG00000034953 RLG00000035012 RLG00000036930
rosa_multiflora	Rmu_sc0001298.1_g000014 Rmu_sc0010937.1_g000002
rosa_roxburghii	Rroxscaffold_3G00236180 Rroxscaffold_4G00282370 Rroxscaffold_4G00287700 Rroxscaffold_5G00344480 Rroxscaffold_6G00420630
rosa_rugosa	Rorug04G0441100 Rorug07G0282000
rosa_samantha	Rh1AG357100 Rh1BG076300 Rh1BG240500 Rh1BG369300 Rh1CG024800 Rh1CG092500 Rh1DG099000 Rh1DG268800 Rh2AG264600 Rh2AG530800 Rh2AG530900 Rh2BG059300 Rh2BG494200 Rh2BG521900 Rh2BG545400 Rh2CG061100 Rh2CG515200 Rh2DG271900 Rh2DG503300 Rh2DG531800 Rh3AG105800 Rh3AG326600 Rh3BG110000 Rh3CG111500 Rh3DG111600 Rh4AG180600 Rh4CG191700 Rh4DG037400 Rh5AG112900 Rh5AG149800 Rh5AG470600 Rh5BG490300 Rh5BG551700 Rh5CG160600 Rh5CG514300 Rh5CG574500 Rh5DG108700 Rh5DG114200 Rh5DG148200 Rh5DG298500 Rh5DG416900 Rh6CG280200 Rh6CG397900 Rh6DG215700 Rh6DG231300 Rh6DG272800 Rh7CG104800 Rh7CG247000 Rh7DG211100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	469
Acc36I	ACCTGC	3 cut(s)	562, 1095, 1438
AccBSI	CCGCTC	1 cut(s)	1542
AccI	GTMKAC	1 cut(s)	648
AccII	CGCG	2 cut(s)	292, 543
AccIII	TCCGGA	1 cut(s)	397
AclI	AACGTT	1 cut(s)	1184
AclWI	GGATC	8 cut(s)	173, 420, 582, 595, 800, 937, 1279, 1382
AcuI	CTGAAG	2 cut(s)	649, 1215
AfaI	GTAC	3 cut(s)	359, 1030, 1277
AfiI	CCNNNNNNNGG	1 cut(s)	144
AflIII	ACRYGT	1 cut(s)	697
AgsI	TTSAA	1 cut(s)	1189
AjiI	CACGTC	1 cut(s)	529
AjnI	CCWGG	5 cut(s)	140, 388, 1231, 1297, 1327
AloI	GAACNNNNNNTCC	2 cut(s)	1228, 1260
Alw21I	GWGCWC	2 cut(s)	337, 603
Alw26I	GTCTC	2 cut(s)	467, 1146
AlwI	GGATC	8 cut(s)	173, 420, 582, 595, 800, 937, 1279, 1382
Ama87I	CYCGRG	2 cut(s)	430, 618
Aor13HI	TCCGGA	1 cut(s)	397
AoxI	GGCC	6 cut(s)	518, 621, 660, 1067, 1324, 1511
ApaI	GGGCCC	3 cut(s)	522, 625, 1328
ApeKI	GCWGC	8 cut(s)	174, 841, 876, 887, 977, 1012, 1047, 1504
Asp700I	GAANNNNTTC	2 cut(s)	243, 707
AspLEI	GCGC	3 cut(s)	106, 292, 470
AspS9I	GGNCC	9 cut(s)	518, 519, 574, 621, 622, 660, 1324, 1325, 1512
AsuC2I	CCSGG	5 cut(s)	275, 431, 432, 1398, 1510
AsuHPI	GGTGA	7 cut(s)	19, 131, 293, 506, 848, 1294, 1485
AvaI	CYCGRG	2 cut(s)	430, 618
AvaII	GGWCC	1 cut(s)	574
BaeGI	GKGCMC	3 cut(s)	522, 625, 1328
BamHI	GGATCC	1 cut(s)	587
BanII	GRGCYC	3 cut(s)	522, 625, 1328
BbsI	GAAGAC	3 cut(s)	1101, 1355, 1482
Bbv12I	GWGCWC	2 cut(s)	337, 603
BbvCI	CCTCAGC	2 cut(s)	60, 404
BbvI	GCAGC	8 cut(s)	186, 853, 888, 899, 989, 1024, 1059, 1516
BccI	CCATC	5 cut(s)	4, 485, 867, 879, 1456
BciT130I	CCWGG	5 cut(s)	142, 390, 1233, 1299, 1329
BcnI	CCSGG	5 cut(s)	275, 431, 432, 1398, 1510
BcoDI	GTCTC	2 cut(s)	467, 1146
BfuAI	ACCTGC	3 cut(s)	562, 1095, 1438
BglI	GCCNNNNNGGC	1 cut(s)	629
BglII	AGATCT	1 cut(s)	16
Bme18I	GGWCC	1 cut(s)	574
BmeT110I	CYCGRG	2 cut(s)	430, 618
BmgBI	CACGTC	1 cut(s)	529
BmgT120I	GGNCC	9 cut(s)	518, 519, 574, 621, 622, 660, 1324, 1325, 1512
BmiI	GGNNCC	4 cut(s)	520, 589, 623, 1326
BmrI	ACTGGG	1 cut(s)	1260
BmsI	GCATC	3 cut(s)	164, 479, 490
BmuI	ACTGGG	1 cut(s)	1260
BpiI	GAAGAC	3 cut(s)	1101, 1355, 1482
BplI	GAGNNNNNCTC	2 cut(s)	122, 154
BpmI	CTGGAG	3 cut(s)	124, 1320, 1350
Bpu10I	CCTNAGC	2 cut(s)	60, 404
BpuEI	CTTGAG	1 cut(s)	1067
BpuMI	CCSGG	5 cut(s)	275, 431, 432, 1398, 1510
Bsa29I	ATCGAT	2 cut(s)	795, 932
BsaBI	GATNNNNATC	2 cut(s)	223, 267
BsaJI	CCNNGG	6 cut(s)	233, 389, 430, 1288, 1327, 1508
BsaWI	WCCGGW	4 cut(s)	181, 397, 576, 1485
BsaXI	ACNNNNNCTCC	8 cut(s)	726, 756, 1034, 1064, 1080, 1110, 1228, 1258
Bsc4I	CCNNNNNNNGG	1 cut(s)	144
Bse1I	ACTGG	2 cut(s)	1210, 1255
Bse3DI	GCAATG	2 cut(s)	42, 1361
Bse8I	GATNNNNATC	2 cut(s)	223, 267
BseAI	TCCGGA	1 cut(s)	397
BseBI	CCWGG	5 cut(s)	142, 390, 1233, 1299, 1329
BseCI	ATCGAT	2 cut(s)	795, 932
BseDI	CCNNGG	6 cut(s)	233, 389, 430, 1288, 1327, 1508
BseGI	GGATG	3 cut(s)	505, 859, 1471
BseJI	GATNNNNATC	2 cut(s)	223, 267
BseLI	CCNNNNNNNGG	1 cut(s)	144
BseMI	GCAATG	2 cut(s)	42, 1361
BseMII	CTCAG	5 cut(s)	51, 161, 395, 1163, 1557
BseNI	ACTGG	2 cut(s)	1210, 1255
BseSI	GKGCMC	3 cut(s)	522, 625, 1328
BseXI	GCAGC	8 cut(s)	186, 853, 888, 899, 989, 1024, 1059, 1516
BseYI	CCCAGC	2 cut(s)	657, 967
BsgI	GTGCAG	3 cut(s)	276, 590, 1478
Bsh1236I	CGCG	2 cut(s)	292, 543
Bsh1285I	CGRYCG	3 cut(s)	227, 715, 839
BshFI	GGCC	6 cut(s)	520, 623, 662, 1069, 1326, 1513
BshVI	ATCGAT	2 cut(s)	795, 932
BsiEI	CGRYCG	3 cut(s)	227, 715, 839
BsiHKAI	GWGCWC	2 cut(s)	337, 603
BsiHKCI	CYCGRG	2 cut(s)	430, 618
BsiSI	CCGG	8 cut(s)	182, 275, 398, 431, 577, 1398, 1486, 1510
BslFI	GGGAC	2 cut(s)	68, 325
BslI	CCNNNNNNNGG	1 cut(s)	144
BsmAI	GTCTC	2 cut(s)	467, 1146
BsmBI	CGTCTC	1 cut(s)	467
BsmFI	GGGAC	2 cut(s)	68, 325
BsmI	GAATGC	2 cut(s)	707, 709
BsnI	GGCC	6 cut(s)	520, 623, 662, 1069, 1326, 1513
BsoBI	CYCGRG	2 cut(s)	430, 618
Bsp120I	GGGCCC	3 cut(s)	518, 621, 1324
Bsp1286I	GDGCHC	5 cut(s)	337, 522, 603, 625, 1328
Bsp13I	TCCGGA	1 cut(s)	397
Bsp19I	CCATGG	1 cut(s)	233
BspANI	GGCC	6 cut(s)	520, 623, 662, 1069, 1326, 1513
BspCNI	CTCAG	5 cut(s)	52, 162, 396, 1162, 1556
BspDI	ATCGAT	2 cut(s)	795, 932
BspEI	TCCGGA	1 cut(s)	397
BspFNI	CGCG	2 cut(s)	292, 543
BspHI	TCATGA	1 cut(s)	1381
BspLI	GGNNCC	4 cut(s)	520, 589, 623, 1326
BspMI	ACCTGC	3 cut(s)	562, 1095, 1438
BspPI	GGATC	8 cut(s)	173, 420, 582, 595, 800, 937, 1279, 1382
BspQI	GCTCTTC	8 cut(s)	767, 851, 858, 897, 987, 994, 1022, 1029
BsrBI	CCGCTC	1 cut(s)	1542
BsrDI	GCAATG	2 cut(s)	42, 1361
BsrI	ACTGG	2 cut(s)	1210, 1255
BssECI	CCNNGG	6 cut(s)	233, 389, 430, 1288, 1327, 1508
BssT1I	CCWWGG	2 cut(s)	233, 1288
Bst2UI	CCWGG	5 cut(s)	142, 390, 1233, 1299, 1329
Bst4CI	ACNGT	6 cut(s)	119, 281, 287, 353, 1138, 1342
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstC8I	GCNNGC	4 cut(s)	88, 255, 259, 548
BstDEI	CTNAG	9 cut(s)	60, 170, 404, 604, 652, 1149, 1272, 1543, 1554
BstDSI	CCRYGG	1 cut(s)	233
BstENI	CCTNNNNNAGG	1 cut(s)	142
BstF5I	GGATG	3 cut(s)	505, 859, 1471
BstFNI	CGCG	2 cut(s)	292, 543
BstHHI	GCGC	3 cut(s)	106, 292, 470
BstMAI	GTCTC	2 cut(s)	467, 1146
BstMCI	CGRYCG	3 cut(s)	227, 715, 839
BstNI	CCWGG	5 cut(s)	142, 390, 1233, 1299, 1329
BstNSI	RCATGY	1 cut(s)	701
BstSLI	GKGCMC	3 cut(s)	522, 625, 1328
BstUI	CGCG	2 cut(s)	292, 543
BstV1I	GCAGC	8 cut(s)	186, 853, 888, 899, 989, 1024, 1059, 1516
BstV2I	GAAGAC	3 cut(s)	1101, 1355, 1482
BstX2I	RGATCY	4 cut(s)	16, 412, 587, 1374
BstXI	CCANNNNNNTGG	1 cut(s)	533
BstYI	RGATCY	4 cut(s)	16, 412, 587, 1374
Bsu15I	ATCGAT	2 cut(s)	795, 932
BsuRI	GGCC	6 cut(s)	520, 623, 662, 1069, 1326, 1513
BsuTUI	ATCGAT	2 cut(s)	795, 932
BtgI	CCRYGG	1 cut(s)	233
BtgZI	GCGATG	1 cut(s)	857
BtrI	CACGTC	1 cut(s)	529
BtsCI	GGATG	3 cut(s)	505, 859, 1471
BtsI	GCAGTG	1 cut(s)	745
BtsIMutI	CAGTG	2 cut(s)	292, 745
BveI	ACCTGC	3 cut(s)	562, 1095, 1438
Cac8I	GCNNGC	4 cut(s)	88, 255, 259, 548
CciI	TCATGA	1 cut(s)	1381
CfoI	GCGC	3 cut(s)	106, 292, 470
Cfr13I	GGNCC	9 cut(s)	518, 519, 574, 621, 622, 660, 1324, 1325, 1512
Cfr9I	CCCGGG	1 cut(s)	430
ClaI	ATCGAT	2 cut(s)	795, 932
CseI	GACGC	3 cut(s)	65, 314, 449
Csp6I	GTAC	3 cut(s)	358, 1029, 1276
CviAII	CATG	6 cut(s)	124, 234, 698, 1279, 1382, 1411
CviQI	GTAC	3 cut(s)	358, 1029, 1276
DdeI	CTNAG	9 cut(s)	60, 170, 404, 604, 652, 1149, 1272, 1543, 1554
EciI	GGCGGA	2 cut(s)	1108, 1526
Eco130I	CCWWGG	2 cut(s)	233, 1288
Eco24I	GRGCYC	3 cut(s)	522, 625, 1328
Eco47I	GGWCC	1 cut(s)	574
Eco57I	CTGAAG	2 cut(s)	649, 1215
Eco88I	CYCGRG	2 cut(s)	430, 618
EcoNI	CCTNNNNNAGG	1 cut(s)	142
EcoO109I	RGGNCCY	4 cut(s)	519, 622, 1324, 1325
EcoRII	CCWGG	5 cut(s)	140, 388, 1231, 1297, 1327
EcoT14I	CCWWGG	2 cut(s)	233, 1288
EcoT22I	ATGCAT	1 cut(s)	709
EcoT38I	GRGCYC	3 cut(s)	522, 625, 1328
ErhI	CCWWGG	2 cut(s)	233, 1288
Esp3I	CGTCTC	1 cut(s)	467
FaeI	CATG	6 cut(s)	127, 237, 701, 1282, 1385, 1414
FaiI	YATR	8 cut(s)	125, 235, 345, 455, 699, 1280, 1383, 1412
FalI	AAGNNNNNCTT	2 cut(s)	470, 502
FaqI	GGGAC	2 cut(s)	68, 325
FatI	CATG	6 cut(s)	123, 233, 697, 1278, 1381, 1410
FauI	CCCGC	1 cut(s)	285
FblI	GTMKAC	1 cut(s)	648
FokI	GGATG	3 cut(s)	512, 846, 1478
FriOI	GRGCYC	3 cut(s)	522, 625, 1328
FspI	TGCGCA	1 cut(s)	469
GlaI	GCGC	3 cut(s)	105, 291, 469
GsaI	CCCAGC	2 cut(s)	661, 971
GsuI	CTGGAG	3 cut(s)	124, 1320, 1350
HaeIII	GGCC	6 cut(s)	520, 623, 662, 1069, 1326, 1513
HapII	CCGG	8 cut(s)	182, 275, 398, 431, 577, 1398, 1486, 1510
HgaI	GACGC	3 cut(s)	65, 314, 449
HhaI	GCGC	3 cut(s)	106, 292, 470
Hin1II	CATG	6 cut(s)	127, 237, 701, 1282, 1385, 1414
Hin6I	GCGC	3 cut(s)	104, 290, 468
HinP1I	GCGC	3 cut(s)	104, 290, 468
HincII	GTYRAC	1 cut(s)	649
HindII	GTYRAC	1 cut(s)	649
HindIII	AAGCTT	1 cut(s)	479
HinfI	GANTC	9 cut(s)	205, 219, 229, 394, 797, 934, 1153, 1393, 1531
HpaII	CCGG	8 cut(s)	182, 275, 398, 431, 577, 1398, 1486, 1510
HphI	GGTGA	7 cut(s)	19, 131, 293, 506, 848, 1294, 1485
Hpy166II	GTNNAC	1 cut(s)	649
Hpy188I	TCNGA	6 cut(s)	210, 224, 304, 475, 1152, 1546
Hpy188III	TCNNGA	4 cut(s)	198, 266, 398, 1382
Hpy8I	GTNNAC	1 cut(s)	649
Hpy99I	CGWCG	5 cut(s)	119, 353, 518, 904, 1531
HpyAV	CCTTC	4 cut(s)	673, 1080, 1086, 1315
HpyCH4III	ACNGT	6 cut(s)	119, 281, 287, 353, 1138, 1342
HpyCH4IV	ACGT	2 cut(s)	528, 1184
HpyCH4V	TGCA	9 cut(s)	86, 257, 386, 510, 571, 707, 750, 1407, 1459
HpyF3I	CTNAG	9 cut(s)	60, 170, 404, 604, 652, 1149, 1272, 1543, 1554
HpySE526I	ACGT	2 cut(s)	528, 1184
Hsp92II	CATG	6 cut(s)	127, 237, 701, 1282, 1385, 1414
HspAI	GCGC	3 cut(s)	104, 290, 468
Kpn2I	TCCGGA	1 cut(s)	397
LguI	GCTCTTC	8 cut(s)	767, 851, 858, 897, 987, 994, 1022, 1029
LmnI	GCTCC	8 cut(s)	400, 747, 884, 1055, 1101, 1168, 1249, 1301
Lsp1109I	GCAGC	8 cut(s)	186, 853, 888, 899, 989, 1024, 1059, 1516
LweI	GCATC	3 cut(s)	164, 479, 490
MaeII	ACGT	2 cut(s)	528, 1184
MaeIII	GTNAC	4 cut(s)	119, 281, 1201, 1336
MbiI	CCGCTC	1 cut(s)	1542
MflI	RGATCY	4 cut(s)	16, 412, 587, 1374
MhlI	GDGCHC	5 cut(s)	337, 522, 603, 625, 1328
MluCI	AATT	2 cut(s)	380, 609
MlyI	GAGTC	3 cut(s)	238, 1147, 1387
MmeI	TCCRAC	1 cut(s)	1271
Mph1103I	ATGCAT	1 cut(s)	709
MroI	TCCGGA	1 cut(s)	397
MroXI	GAANNNNTTC	2 cut(s)	243, 707
MseI	TTAA	1 cut(s)	1224
MslI	CAYNNNNRTG	3 cut(s)	160, 702, 1415
MspI	CCGG	8 cut(s)	182, 275, 398, 431, 577, 1398, 1486, 1510
Mva1269I	GAATGC	2 cut(s)	707, 709
MvaI	CCWGG	5 cut(s)	142, 390, 1233, 1299, 1329
MvnI	CGCG	2 cut(s)	292, 543
NciI	CCSGG	5 cut(s)	275, 431, 432, 1398, 1510
NcoI	CCATGG	1 cut(s)	233
NlaIII	CATG	6 cut(s)	127, 237, 701, 1282, 1385, 1414
NlaIV	GGNNCC	4 cut(s)	520, 589, 623, 1326
NmuCI	GTSAC	2 cut(s)	119, 281
NsbI	TGCGCA	1 cut(s)	469
NsiI	ATGCAT	1 cut(s)	709
NspI	RCATGY	1 cut(s)	701
PagI	TCATGA	1 cut(s)	1381
PciI	ACATGT	1 cut(s)	697
PciSI	GCTCTTC	8 cut(s)	767, 851, 858, 897, 987, 994, 1022, 1029
PcsI	WCGNNNNNNNCGW	2 cut(s)	801, 938
PctI	GAATGC	2 cut(s)	707, 709
PdmI	GAANNNNTTC	2 cut(s)	243, 707
PfeI	GAWTC	6 cut(s)	205, 219, 394, 797, 934, 1531
PfoI	TCCNGGA	3 cut(s)	140, 273, 1396
Ple19I	CGATCG	2 cut(s)	227, 715
PleI	GAGTC	3 cut(s)	237, 1147, 1387
PpsI	GAGTC	3 cut(s)	237, 1147, 1387
PscI	ACATGT	1 cut(s)	697
Psp1406I	AACGTT	1 cut(s)	1184
Psp6I	CCWGG	5 cut(s)	140, 388, 1231, 1297, 1327
PspFI	CCCAGC	2 cut(s)	657, 967
PspGI	CCWGG	5 cut(s)	140, 388, 1231, 1297, 1327
PspN4I	GGNNCC	4 cut(s)	520, 589, 623, 1326
PspOMI	GGGCCC	3 cut(s)	518, 621, 1324
PspPI	GGNCC	9 cut(s)	518, 519, 574, 621, 622, 660, 1324, 1325, 1512
PsuI	RGATCY	4 cut(s)	16, 412, 587, 1374
PvuI	CGATCG	2 cut(s)	227, 715
RsaI	GTAC	3 cut(s)	359, 1030, 1277
RsaNI	GTAC	3 cut(s)	358, 1029, 1276
RseI	CAYNNNNRTG	3 cut(s)	160, 702, 1415
SalI	GTCGAC	1 cut(s)	647
SapI	GCTCTTC	8 cut(s)	767, 851, 858, 897, 987, 994, 1022, 1029
SaqAI	TTAA	1 cut(s)	1224
Sau96I	GGNCC	9 cut(s)	518, 519, 574, 621, 622, 660, 1324, 1325, 1512
SchI	GAGTC	3 cut(s)	238, 1147, 1387
SduI	GDGCHC	5 cut(s)	337, 522, 603, 625, 1328
SfaNI	GCATC	3 cut(s)	164, 479, 490
SinI	GGWCC	1 cut(s)	574
SmaI	CCCGGG	1 cut(s)	432
SmiMI	CAYNNNNRTG	3 cut(s)	160, 702, 1415
SmlI	CTYRAG	1 cut(s)	1082
SmoI	CTYRAG	1 cut(s)	1082
Sse9I	AATT	2 cut(s)	380, 609
StyI	CCWWGG	2 cut(s)	233, 1288
TaaI	ACNGT	6 cut(s)	119, 281, 287, 353, 1138, 1342
TaiI	ACGT	2 cut(s)	531, 1187
TasI	AATT	2 cut(s)	380, 609
TatI	WGTACW	1 cut(s)	1275
TauI	GCSGC	4 cut(s)	546, 561, 564, 1542
TfiI	GAWTC	6 cut(s)	205, 219, 394, 797, 934, 1531
Tru1I	TTAA	1 cut(s)	1224
Tru9I	TTAA	1 cut(s)	1224
TscAI	CASTG	2 cut(s)	292, 752
TseFI	GTSAC	2 cut(s)	119, 281
TseI	GCWGC	8 cut(s)	174, 841, 876, 887, 977, 1012, 1047, 1504
Tsp45I	GTSAC	2 cut(s)	119, 281
TspDTI	ATGAA	4 cut(s)	31, 140, 789, 926
TspGWI	ACGGA	2 cut(s)	375, 1155
TspMI	CCCGGG	1 cut(s)	430
TspRI	CASTG	2 cut(s)	292, 752
VpaK11BI	GGWCC	1 cut(s)	574
XagI	CCTNNNNNAGG	1 cut(s)	142
XceI	RCATGY	1 cut(s)	701
XcmI	CCANNNNNNNNNTGG	3 cut(s)	148, 533, 1295
XmaI	CCCGGG	1 cut(s)	430
XmiI	GTMKAC	1 cut(s)	648
XmnI	GAANNNNTTC	2 cut(s)	243, 707
Zsp2I	ATGCAT	1 cut(s)	709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.