FvH4_5g11822
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000385
Physical Location & Seq
Reverse (-)
6693871 .. 6696671
2801 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11822.t1

Sequence Viewer

Length: 1533 bp
ATGGCAAGAGGAGGATCCAAGGTGACGCTAGTTGAGGGAGAGCAACACGATGCTGGGGAATCAGCATTGGCTGCCGGCACTCCTCATGTGGTTGAGCAACTAGTCGCACGCGAAGAGGCAAGCGAGCCGGAGGTTCCGAAGAAGAAACACTTGAAGGATGTCATAGCCGATATCGACTCACGACTATCCGAGGTGGAGGGGTTCGTGAGTGGCATGGAGACCCGAGTGGAGGAACTAGACCAAAGAGCGGATGGTCTAGAGGAGGAGGACTCCGTCATCCACGTCGCGATGAAGAGCATAACCATCAAGTTCGAGGATGCCTTGCGGGAGGAGGTTGCCAAGATTCGCGAGGAGTTCATGGGGGAACTCGCGACTATGCGACAAGTCCACGAGAGGGAAATGCAAAGCGCCCTTGCACGCATGGAGGAGATGCGTGAGGACTTAAACCTTTGCAAGAGGGCAGTAGCGTCGGGTGGTCCAAGCACGAGTGGTGCTGCCATGGAGGTAAGGCGCGTGGAAGTGCCGAAACCTAAGTCCTTTGGAGGCGCACGCAACGCACGAGAAGTTGATAACTTCTTATGGGGGCTGGATCAATATTTCGGAGCCGTGGGCATCGCGGAGGAGGACGCCAAGATCAAGAGCGCAGCTCTATACCTCACCGACACCGCCATGCTATGGTGGCGAAGGAAGAAGGGAGATATTGAAAAAGGTACGTGCACCATCACAACCTTTGACGATTTCACTAAGGAGCTTAAGAAACAATTTTATCCCGAGAATGCCGAGGAAGAAGCAAGGGCTCGTCTTCGACGGCTCAAGCAAACGAGCACCATCCGCGACTACATAAAGGAGTTCACAACCTTGGTGCTCGAAATCCCCGATATGTCCGATAAAGACGCCCTTTTCTACTTCATGGATGGTCTCCAACCATGGGCTAAGACCGAGCTACGACGTCGTGGGGTGCAAGACCTTGCGAGCGCCATAGCCGCGGCCGACGCCCTAATCGACTACTCAAATCCGAGGGAGTCCGTGAGCAAACCAAAAGAAAAGAAGGGTGGCTATGTCAAAGGTGGGGGAGACAAAAGCCAACGTAAAGAGGAGCCGCGACGACTTAAGGCCTCGGGATGGAACAAAGACAAGGGCAAGGCCGAGGAAGCAAAGGGGGCGAAGCGACCGAACGACAACAAGTGCTTCCTATGTGATGGGCCGCATTGGGCGAGGGATTGCCCACAAAGAAAAGCTCTAAGTGCACTCTTGGGGAGTCGTCAAGGTGATGAGGAAGCCGAGGGCGGCAATGGTGCACACATGGGGGCACAAGATCAAGGATGGCAAACTCATGATGGAGGAATGCAAGGTGCAAGCCATCCAAGATTGGGAGCCGCCCACGAAGGTGCAAGAGTTGAGATCTTTCCTTGGGCTAGTGAACTACTACCGCCGCTTCATTCAAGGATATTCGGCGAGGGCCGCACCATTAACCGACCTTCTCAAGAAAGGCAAAACTTGGGAGTGGTCGACAAAGTGCCAAGAAGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo RVT_1 Retrotrans_gag gag-asp_proteas

Protein Analysis

511

Amino Acids

56.74

Weight (kDa)

5.92

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 175 - 342 1e-13 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 214 - 309 2.2e-18 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000385)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23713 FvH4_1g25744 FvH4_2g00261 FvH4_2g00262 FvH4_2g15681 FvH4_2g17851 FvH4_2g35550 FvH4_3g05280 FvH4_3g10531 FvH4_3g25910 FvH4_3g28953 FvH4_3g33371 FvH4_3g33536 FvH4_3g36090 FvH4_4g03471 FvH4_4g03480 FvH4_4g06701 FvH4_4g19351 FvH4_4g34281 FvH4_5g00040 FvH4_5g03811 FvH4_5g03812 FvH4_5g11822 FvH4_5g30921 FvH4_5g31701 FvH4_6g12161 FvH4_6g15222 FvH4_6g15223 FvH4_6g17701 FvH4_6g17710 FvH4_6g19301 FvH4_6g33011 FvH4_6g34501 FvH4_6g50161 FvH4_7g04111 FvH4_7g04120 FvH4_7g04121 FvH4_7g04122 FvH4_7g04123 FvH4_7g28231 FvH4_c7g00010
malus_domestica MD12G1084200.v1.1
prunus_persica Prupe.1G206200_v2.0.a1 Prupe.8G085600_v2.0.a1
pyrus_communis pycom01g11080 pycom02g20500 pycom09g18370 pycom12555g00210 pycom13g23120 pycom14g10590 pycom16g17620 pycom16g22750
rosa_chinensis RchiOBHm_Chr2g0137481 RchiOBHm_Chr6g0251961 RchiOBHm_Chr7g0185821
rosa_laevigata RLG00000005585 RLG00000010281 RLG00000010912 RLG00000030342 RLG00000034281
rosa_multiflora Rmu_sc0000096.1_g000010 Rmu_sc0002481.1_g000045 Rmu_sc0003598.1_g000009 Rmu_sc0003863.1_g000019 Rmu_sc0003973.1_g000002 Rmu_sc0004823.1_g000050 Rmu_sc0005621.1_g000007 Rmu_sc0006537.1_g000030 Rmu_sc0006608.1_g000014 Rmu_sc0008506.1_g000007 Rmu_sc0014428.1_g000001 Rmu_sc0035437.1_g000001 Rmu_ssc0000396.1_g000022
rosa_roxburghii Rroxscaffold_175G00432300 Rroxscaffold_17G00435390 Rroxscaffold_27G00446590 Rroxscaffold_29G00441820 Rroxscaffold_31G00438110 Rroxscaffold_32G00442750 Rroxscaffold_33G00439810 Rroxscaffold_37G00445160 Rroxscaffold_4G00306500 Rroxscaffold_4G00327700 Rroxscaffold_4G00332630 Rroxscaffold_52G00439360 Rroxscaffold_63G00444420 Rroxscaffold_76G00448580 Rroxscaffold_7G00156270
rosa_rugosa Rorug03G0295200
rosa_samantha Rh1BG433700 Rh1CG115400 Rh2AG676300 Rh2CG341800 Rh2DG381400 Rh3BG370100 Rh3BG370200 Rh4AG441600 Rh4BG076500 Rh4BG107400 Rh5BG005600 Rh6BG010100 Rh7BG000200
rosa_wichuraiana Rw0G003820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 952
AccB7I CCANNNNNTGG 1 cut(s) 675
AccBSI CCGCTC 1 cut(s) 248
AccI GTMKAC 1 cut(s) 1509
AccII CGCG 9 cut(s) 111, 287, 348, 371, 513, 617, 834, 986, 1102
AclWI GGATC 3 cut(s) 9, 22, 597
AcoI YGGCCR 1 cut(s) 987
AcyI GRCGYC 4 cut(s) 627, 894, 949, 993
AfaI GTAC 1 cut(s) 712
AfiI CCNNNNNNNGG 7 cut(s) 229, 247, 394, 675, 928, 1122, 1370
AflII CTTAAG 2 cut(s) 752, 1109
AgsI TTSAA 3 cut(s) 154, 704, 1443
AhlI ACTAGT 1 cut(s) 100
AjiI CACGTC 1 cut(s) 283
AleI CACNNNNGTG 1 cut(s) 1386
AluBI AGCT 4 cut(s) 647, 751, 943, 1238
AluI AGCT 4 cut(s) 647, 751, 943, 1238
Alw21I GWGCWC 5 cut(s) 719, 827, 867, 1249, 1300
Alw26I GTCTC 3 cut(s) 212, 923, 1068
Alw44I GTGCAC 3 cut(s) 715, 1245, 1296
AlwI GGATC 3 cut(s) 9, 22, 597
Ama87I CYCGRG 3 cut(s) 222, 770, 1117
AoxI GGCC 5 cut(s) 987, 1113, 1143, 1202, 1459
ApaLI GTGCAC 3 cut(s) 715, 1245, 1296
ApeKI GCWGC 3 cut(s) 71, 494, 644
ArsI GACNNNNNNTTYG 2 cut(s) 518, 550
AspLEI GCGC 5 cut(s) 410, 513, 548, 644, 977
AspS9I GGNCC 3 cut(s) 476, 1202, 1459
AsuHPI GGTGA 3 cut(s) 34, 649, 1280
AvaI CYCGRG 3 cut(s) 222, 770, 1117
AvaII GGWCC 1 cut(s) 476
BaeGI GKGCMC 4 cut(s) 719, 1249, 1300, 1312
BamHI GGATCC 1 cut(s) 14
BanII GRGCYC 1 cut(s) 799
BauI CACGAG 3 cut(s) 389, 484, 558
BbsI GAAGAC 1 cut(s) 794
Bbv12I GWGCWC 5 cut(s) 719, 827, 867, 1249, 1300
BbvI GCAGC 3 cut(s) 58, 481, 656
BceAI ACGGC 2 cut(s) 590, 824
BcgI CGANNNNNNTGC 2 cut(s) 450, 484
BcoDI GTCTC 3 cut(s) 212, 923, 1068
BcuI ACTAGT 1 cut(s) 100
BfaI CTAG 5 cut(s) 29, 101, 236, 257, 1416
BfoI RGCGCY 2 cut(s) 411, 978
BfrI CTTAAG 2 cut(s) 752, 1109
BglII AGATCT 1 cut(s) 1401
Bme18I GGWCC 1 cut(s) 476
BmeT110I CYCGRG 3 cut(s) 222, 770, 1117
BmgBI CACGTC 1 cut(s) 283
BmgT120I GGNCC 3 cut(s) 476, 1202, 1459
BmiI GGNNCC 5 cut(s) 16, 135, 604, 1098, 1375
BmsI GCATC 4 cut(s) 40, 307, 420, 621
BpiI GAAGAC 1 cut(s) 794
BplI GAGNNNNNCTC 4 cut(s) 254, 286, 631, 663
BpuEI CTTGAG 2 cut(s) 797, 1467
BsaAI YACGTR 1 cut(s) 714
BsaHI GRCGYC 4 cut(s) 627, 894, 949, 993
BsaI GGTCTC 2 cut(s) 212, 923
Bsc4I CCNNNNNNNGG 7 cut(s) 229, 247, 394, 675, 928, 1122, 1370
Bse118I RCCGGY 1 cut(s) 74
Bse3DI GCAATG 1 cut(s) 1297
BseGI GGATG 9 cut(s) 163, 256, 276, 322, 828, 919, 1127, 1328, 1360
BseLI CCNNNNNNNGG 7 cut(s) 229, 247, 394, 675, 928, 1122, 1370
BseMI GCAATG 1 cut(s) 1297
BseRI GAGGAG 9 cut(s) 24, 72, 275, 278, 344, 365, 440, 635, 1109
BseSI GKGCMC 4 cut(s) 719, 1249, 1300, 1312
BseX3I CGGCCG 1 cut(s) 987
BseXI GCAGC 3 cut(s) 58, 481, 656
BseYI CCCAGC 1 cut(s) 53
Bsh1236I CGCG 9 cut(s) 111, 287, 348, 371, 513, 617, 834, 986, 1102
Bsh1285I CGRYCG 2 cut(s) 990, 1172
BshFI GGCC 5 cut(s) 989, 1115, 1145, 1204, 1461
BsiEI CGRYCG 2 cut(s) 990, 1172
BsiHKAI GWGCWC 5 cut(s) 719, 827, 867, 1249, 1300
BsiHKCI CYCGRG 3 cut(s) 222, 770, 1117
BsiSI CCGG 2 cut(s) 75, 128
BslI CCNNNNNNNGG 7 cut(s) 229, 247, 394, 675, 928, 1122, 1370
BsmAI GTCTC 3 cut(s) 212, 923, 1068
BsmI GAATGC 2 cut(s) 781, 1350
BsnI GGCC 5 cut(s) 989, 1115, 1145, 1204, 1461
Bso31I GGTCTC 2 cut(s) 212, 923
BsoBI CYCGRG 3 cut(s) 222, 770, 1117
Bsp1286I GDGCHC 7 cut(s) 719, 799, 827, 867, 1249, 1300, 1312
Bsp143I GATC 5 cut(s) 14, 589, 633, 1315, 1401
Bsp19I CCATGG 2 cut(s) 498, 926
Bsp68I TCGCGA 3 cut(s) 287, 348, 371
BspANI GGCC 5 cut(s) 989, 1115, 1145, 1204, 1461
BspFNI CGCG 9 cut(s) 111, 287, 348, 371, 513, 617, 834, 986, 1102
BspHI TCATGA 1 cut(s) 1333
BspLI GGNNCC 5 cut(s) 16, 135, 604, 1098, 1375
BspPI GGATC 3 cut(s) 9, 22, 597
BspQI GCTCTTC 1 cut(s) 287
BspTI CTTAAG 2 cut(s) 752, 1109
BspTNI GGTCTC 2 cut(s) 212, 923
BsrBI CCGCTC 1 cut(s) 248
BsrDI GCAATG 1 cut(s) 1297
BsrFI RCCGGY 1 cut(s) 74
BssAI RCCGGY 1 cut(s) 74
BssMI GATC 5 cut(s) 14, 589, 633, 1315, 1401
BssNI GRCGYC 4 cut(s) 627, 894, 949, 993
BssSI CACGAG 3 cut(s) 389, 484, 558
BssT1I CCWWGG 5 cut(s) 18, 498, 858, 926, 1409
Bst2BI CACGAG 3 cut(s) 389, 484, 558
Bst6I CTCTTC 2 cut(s) 108, 287
BstACI GRCGYC 4 cut(s) 627, 894, 949, 993
BstAFI CTTAAG 2 cut(s) 752, 1109
BstAPI GCANNNNNTGC 1 cut(s) 71
BstBAI YACGTR 1 cut(s) 714
BstC8I GCNNGC 8 cut(s) 76, 109, 121, 125, 418, 550, 973, 1357
BstDEI CTNAG 4 cut(s) 531, 744, 933, 1241
BstDSI CCRYGG 4 cut(s) 498, 606, 926, 984
BstF5I GGATG 9 cut(s) 163, 256, 276, 322, 828, 919, 1127, 1328, 1360
BstFNI CGCG 9 cut(s) 111, 287, 348, 371, 513, 617, 834, 986, 1102
BstH2I RGCGCY 2 cut(s) 411, 978
BstHHI GCGC 5 cut(s) 410, 513, 548, 644, 977
BstKTI GATC 5 cut(s) 17, 592, 636, 1318, 1404
BstMAI GTCTC 3 cut(s) 212, 923, 1068
BstMBI GATC 5 cut(s) 14, 589, 633, 1315, 1401
BstMCI CGRYCG 2 cut(s) 990, 1172
BstSLI GKGCMC 4 cut(s) 719, 1249, 1300, 1312
BstUI CGCG 9 cut(s) 111, 287, 348, 371, 513, 617, 834, 986, 1102
BstV1I GCAGC 3 cut(s) 58, 481, 656
BstV2I GAAGAC 1 cut(s) 794
BstX2I RGATCY 2 cut(s) 14, 1401
BstYI RGATCY 2 cut(s) 14, 1401
BstZI CGGCCG 1 cut(s) 987
BsuRI GGCC 5 cut(s) 989, 1115, 1145, 1204, 1461
BtgI CCRYGG 4 cut(s) 498, 606, 926, 984
BtgZI GCGATG 2 cut(s) 302, 598
BtrI CACGTC 1 cut(s) 283
BtsCI GGATG 9 cut(s) 163, 256, 276, 322, 828, 919, 1127, 1328, 1360
BtuMI TCGCGA 3 cut(s) 287, 348, 371
Cac8I GCNNGC 8 cut(s) 76, 109, 121, 125, 418, 550, 973, 1357
CciI TCATGA 1 cut(s) 1333
CfoI GCGC 5 cut(s) 410, 513, 548, 644, 977
Cfr10I RCCGGY 1 cut(s) 74
Cfr13I GGNCC 3 cut(s) 476, 1202, 1459
Cfr42I CCGCGG 1 cut(s) 987
CseI GACGC 5 cut(s) 34, 456, 635, 902, 1001
Csp6I GTAC 1 cut(s) 711
CviQI GTAC 1 cut(s) 711
DdeI CTNAG 4 cut(s) 531, 744, 933, 1241
DpnI GATC 5 cut(s) 16, 591, 635, 1317, 1403
DpnII GATC 5 cut(s) 14, 589, 633, 1315, 1401
EaeI YGGCCR 1 cut(s) 987
EagI CGGCCG 1 cut(s) 987
Eam1104I CTCTTC 2 cut(s) 108, 287
EarI CTCTTC 2 cut(s) 108, 287
EclXI CGGCCG 1 cut(s) 987
Eco130I CCWWGG 5 cut(s) 18, 498, 858, 926, 1409
Eco147I AGGCCT 1 cut(s) 1115
Eco24I GRGCYC 1 cut(s) 799
Eco31I GGTCTC 2 cut(s) 212, 923
Eco32I GATATC 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 476
Eco52I CGGCCG 1 cut(s) 987
Eco88I CYCGRG 3 cut(s) 222, 770, 1117
EcoRV GATATC 1 cut(s) 172
EcoT14I CCWWGG 5 cut(s) 18, 498, 858, 926, 1409
EcoT38I GRGCYC 1 cut(s) 799
ErhI CCWWGG 5 cut(s) 18, 498, 858, 926, 1409
FalI AAGNNNNNCTT 4 cut(s) 134, 166, 882, 914
FauI CCCGC 1 cut(s) 318
FblI GTMKAC 1 cut(s) 1509
FokI GGATG 9 cut(s) 170, 263, 263, 329, 815, 926, 1134, 1335, 1347
FriOI GRGCYC 1 cut(s) 799
FspBI CTAG 5 cut(s) 29, 101, 236, 257, 1416
GlaI GCGC 5 cut(s) 409, 512, 547, 643, 976
GsaI CCCAGC 1 cut(s) 57
HaeII RGCGCY 2 cut(s) 411, 978
HaeIII GGCC 5 cut(s) 989, 1115, 1145, 1204, 1461
HapII CCGG 2 cut(s) 75, 128
HgaI GACGC 5 cut(s) 34, 456, 635, 902, 1001
HhaI GCGC 5 cut(s) 410, 513, 548, 644, 977
Hin1I GRCGYC 4 cut(s) 627, 894, 949, 993
Hin6I GCGC 5 cut(s) 408, 511, 546, 642, 975
HinP1I GCGC 5 cut(s) 408, 511, 546, 642, 975
HincII GTYRAC 1 cut(s) 1510
HindII GTYRAC 1 cut(s) 1510
HinfI GANTC 6 cut(s) 59, 176, 269, 343, 1022, 1258
HpaII CCGG 2 cut(s) 75, 128
HphI GGTGA 3 cut(s) 34, 649, 1280
Hpy166II GTNNAC 7 cut(s) 388, 717, 852, 1247, 1298, 1421, 1510
Hpy188I TCNGA 5 cut(s) 138, 190, 602, 886, 1017
Hpy8I GTNNAC 7 cut(s) 388, 717, 852, 1247, 1298, 1421, 1510
Hpy99I CGWCG 7 cut(s) 287, 472, 810, 951, 954, 995, 1107
HpyAV CCTTC 6 cut(s) 148, 678, 685, 1042, 1379, 1488
HpyCH4IV ACGT 4 cut(s) 282, 713, 949, 1087
HpyF3I CTNAG 4 cut(s) 531, 744, 933, 1241
HpySE526I ACGT 4 cut(s) 282, 713, 949, 1087
Hsp92I GRCGYC 4 cut(s) 627, 894, 949, 993
HspAI GCGC 5 cut(s) 408, 511, 546, 642, 975
KroI GCCGGC 1 cut(s) 74
KroNI GCCGGC 1 cut(s) 76
KspI CCGCGG 1 cut(s) 987
Kzo9I GATC 5 cut(s) 14, 589, 633, 1315, 1401
LguI GCTCTTC 1 cut(s) 287
LmnI GCTCC 4 cut(s) 602, 748, 1096, 1373
LpnPI CCDG 4 cut(s) 39, 88, 141, 572
Lsp1109I GCAGC 3 cut(s) 58, 481, 656
LweI GCATC 4 cut(s) 40, 307, 420, 621
MaeI CTAG 5 cut(s) 29, 101, 236, 257, 1416
MaeII ACGT 4 cut(s) 282, 713, 949, 1087
MaeIII GTNAC 1 cut(s) 22
MalI GATC 5 cut(s) 16, 591, 635, 1317, 1403
MbiI CCGCTC 1 cut(s) 248
MboI GATC 5 cut(s) 14, 589, 633, 1315, 1401
MboII GAAGA 7 cut(s) 125, 151, 154, 304, 700, 794, 797
MflI RGATCY 2 cut(s) 14, 1401
MhlI GDGCHC 7 cut(s) 719, 799, 827, 867, 1249, 1300, 1312
MluCI AATT 1 cut(s) 761
MlyI GAGTC 4 cut(s) 170, 263, 1031, 1267
MmeI TCCRAC 1 cut(s) 946
MroNI GCCGGC 1 cut(s) 74
MseI TTAA 4 cut(s) 443, 753, 1110, 1470
MslI CAYNNNNRTG 2 cut(s) 668, 1386
MspA1I CMGCKG 1 cut(s) 986
MspCI CTTAAG 2 cut(s) 752, 1109
MspI CCGG 2 cut(s) 75, 128
Mva1269I GAATGC 2 cut(s) 781, 1350
MvnI CGCG 9 cut(s) 111, 287, 348, 371, 513, 617, 834, 986, 1102
NaeI GCCGGC 1 cut(s) 76
NcoI CCATGG 2 cut(s) 498, 926
NdeII GATC 5 cut(s) 14, 589, 633, 1315, 1401
NgoMIV GCCGGC 1 cut(s) 74
NlaIV GGNNCC 5 cut(s) 16, 135, 604, 1098, 1375
NmeAIII GCCGAG 3 cut(s) 805, 1171, 1306
NmuCI GTSAC 1 cut(s) 22
NruI TCGCGA 3 cut(s) 287, 348, 371
OliI CACNNNNGTG 1 cut(s) 1386
PagI TCATGA 1 cut(s) 1333
PceI AGGCCT 1 cut(s) 1115
PciSI GCTCTTC 1 cut(s) 287
PcsI WCGNNNNNNNCGW 3 cut(s) 556, 873, 999
PctI GAATGC 2 cut(s) 781, 1350
PdiI GCCGGC 1 cut(s) 76
PfeI GAWTC 2 cut(s) 59, 343
PflFI GACNNNGTC 1 cut(s) 272
PflMI CCANNNNNTGG 1 cut(s) 675
PleI GAGTC 4 cut(s) 170, 263, 1030, 1266
PpsI GAGTC 4 cut(s) 170, 263, 1030, 1266
Ppu21I YACGTR 1 cut(s) 714
PspFI CCCAGC 1 cut(s) 53
PspN4I GGNNCC 5 cut(s) 16, 135, 604, 1098, 1375
PspPI GGNCC 3 cut(s) 476, 1202, 1459
PsuI RGATCY 2 cut(s) 14, 1401
PsyI GACNNNGTC 1 cut(s) 272
RruI TCGCGA 3 cut(s) 287, 348, 371
RsaI GTAC 1 cut(s) 712
RsaNI GTAC 1 cut(s) 711
RseI CAYNNNNRTG 2 cut(s) 668, 1386
SacII CCGCGG 1 cut(s) 987
SalI GTCGAC 1 cut(s) 1508
SapI GCTCTTC 1 cut(s) 287
SaqAI TTAA 4 cut(s) 443, 753, 1110, 1470
Sau3AI GATC 5 cut(s) 14, 589, 633, 1315, 1401
Sau96I GGNCC 3 cut(s) 476, 1202, 1459
SchI GAGTC 4 cut(s) 170, 263, 1031, 1267
SduI GDGCHC 7 cut(s) 719, 799, 827, 867, 1249, 1300, 1312
SfaNI GCATC 4 cut(s) 40, 307, 420, 621
Sfr303I CCGCGG 1 cut(s) 987
SgrBI CCGCGG 1 cut(s) 987
SinI GGWCC 1 cut(s) 476
SmiMI CAYNNNNRTG 2 cut(s) 668, 1386
SmlI CTYRAG 4 cut(s) 752, 812, 1109, 1482
SmoI CTYRAG 4 cut(s) 752, 812, 1109, 1482
SpeI ACTAGT 1 cut(s) 100
Sse9I AATT 1 cut(s) 761
SseBI AGGCCT 1 cut(s) 1115
SspI AATATT 1 cut(s) 596
SspMI CTAG 5 cut(s) 29, 101, 236, 257, 1416
StuI AGGCCT 1 cut(s) 1115
StyI CCWWGG 5 cut(s) 18, 498, 858, 926, 1409
TaiI ACGT 4 cut(s) 285, 716, 952, 1090
TaqI TCGA 6 cut(s) 174, 312, 805, 867, 1002, 1509
TaqII GACCGA 2 cut(s) 953, 1186
TasI AATT 1 cut(s) 761
TauI GCSGC 8 cut(s) 986, 989, 1102, 1207, 1290, 1379, 1435, 1464
TfiI GAWTC 2 cut(s) 59, 343
Tru1I TTAA 4 cut(s) 443, 753, 1110, 1470
Tru9I TTAA 4 cut(s) 443, 753, 1110, 1470
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 3 cut(s) 71, 494, 644
Tsp45I GTSAC 1 cut(s) 22
TspDTI ATGAA 4 cut(s) 305, 346, 898, 1427
TspGWI ACGGA 2 cut(s) 262, 1015
Tth111I GACNNNGTC 1 cut(s) 272
Van91I CCANNNNNTGG 1 cut(s) 675
Vha464I CTTAAG 2 cut(s) 752, 1109
VneI GTGCAC 3 cut(s) 715, 1245, 1296
VpaK11BI GGWCC 1 cut(s) 476
XbaI TCTAGA 1 cut(s) 256
XcmI CCANNNNNNNNNTGG 1 cut(s) 248
XmiI GTMKAC 1 cut(s) 1509
XspI CTAG 5 cut(s) 29, 101, 236, 257, 1416
ZraI GACGTC 1 cut(s) 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.