FvH4_6g19301
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000385
Physical Location & Seq
Forward (+)
12815685 .. 12816986
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g19301.t1

Sequence Viewer

Length: 1302 bp
ATGACTACCTTTGATGACTTCACTAGAGAATTAAAGAGACAATTTTATCCCGAGAATGCCGAGGACGAGGCAAGAGCCTGTTTGCGAAGGCTCAAGCACTCGGGGCCTATTCGAGAGTACATCAAAGATTTCACAAATTTGGTGCTCGAGATCCCCGACTTGTCCGACAAGGACGCACTCTTCAATTTTATGGATGGTCTCCAACCATGGGCCAAGACCGAGCTACGTCGACATGGGGTACAAGACCTTGCTACCGCCATAGCCACGGCCGAAAGCCTAATTGACTACACTAGTCAAAGAGAGACCACCACTAAGCCGAAGGAGAAGAAGAGTAACAATGCCAAAGGTGGGGGAGACAAGAGCCAACGCAAAGACGAGCCCCGTCAAGACAACTATGCGGCAAGAAGCAAAGACAAAGGCAAGCAAAAAGACGTGAGGAGTTCAAAGCCCAACAACAACAAGTGCTTCCTTTGTGATGGGCCGCATTGGGCTAGAGATTGTTCGCAAAAGAGGGCACTAAGTGCACTCTTAGGGAGTCATCAAGGTGAAGCCGAGGGCGACGAAGGTGTAAGCATTGGGTCGATGCAATTACTCAACATAATTCGATCAACACCCAAAGTCCAAGCCAAAGGCCTACTCTTCGTCGACTTGACAATTGGAGGGAAGCCAACGTCCACAATGCTCGATAAGGGGGCAACCCACAATTTCATCTCAATCGAAGAAGCCCAAAGGCTAGGGCTACGAGGGAGTGATGGAGGGGGCTCCATCAAGGCGGTTAACTCACCCACTCGACCAATTCAAGGTATGATTCGAGGAGTCAAGACTACCGTGGGGGCATGGTGTGGAGACTTGGACTTCTCGATTGTTCCAATGGATGACTACAAAGTCGTCCTAGGGTTGGAATTCTATGATCAAGTCAACGCCATACCGGTGCCGTTCGCCAATAGCATGTGCATCATAGATGGCGACAAGGCGTGCGTCGTGCCGACAAAGAGAGGCGTCAAACAAGACTTGAATGTGTTGTCGGCACTACAATTCAAGAAGGGCGTCAAGAGGGAAGAGGAGAGCTACCTAGCCATCCTCAAGGAGTACGATGATGAGGAGTCGAGGCCACAAGACGACGTGCCCAAGGAGGTAGCCAAAGTGCTTGAATTGAAGAGTTCAAGGATGTGTCCCCATCCGAGCTACCCAAGAGACTACCACCAAGGAGGGAAGTCGACCATGCAATTGAGTTGGAGCCGGGAACAAAGCCACCCGCCATGGGCGCATACCGCATGGCACCACCCGAGTTGGCGGAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo RVT_1 Retrotrans_gag gag-asp_proteas

Protein Analysis

434

Amino Acids

48.47

Weight (kDa)

8.45

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 2 - 69 1.3e-10 Retrotransposon gag protein
Ty3_capsid PF19259 3 - 112 1.1e-07 Ty3 transposon capsid-like protein
Asp_protease_2 PF13650 215 - 302 6.2e-08 Aspartyl protease
gag-asp_proteas PF13975 215 - 302 7.3e-08 gag-polyprotein putative aspartyl protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000385)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23713 FvH4_1g25744 FvH4_2g00261 FvH4_2g00262 FvH4_2g15681 FvH4_2g17851 FvH4_2g35550 FvH4_3g05280 FvH4_3g10531 FvH4_3g25910 FvH4_3g28953 FvH4_3g33371 FvH4_3g33536 FvH4_3g36090 FvH4_4g03471 FvH4_4g03480 FvH4_4g06701 FvH4_4g19351 FvH4_4g34281 FvH4_5g00040 FvH4_5g03811 FvH4_5g03812 FvH4_5g11822 FvH4_5g30921 FvH4_5g31701 FvH4_6g12161 FvH4_6g15222 FvH4_6g15223 FvH4_6g17701 FvH4_6g17710 FvH4_6g19301 FvH4_6g33011 FvH4_6g34501 FvH4_6g50161 FvH4_7g04111 FvH4_7g04120 FvH4_7g04121 FvH4_7g04122 FvH4_7g04123 FvH4_7g28231 FvH4_c7g00010
malus_domestica MD12G1084200.v1.1
prunus_persica Prupe.1G206200_v2.0.a1 Prupe.8G085600_v2.0.a1
pyrus_communis pycom01g11080 pycom02g20500 pycom09g18370 pycom12555g00210 pycom13g23120 pycom14g10590 pycom16g17620 pycom16g22750
rosa_chinensis RchiOBHm_Chr2g0137481 RchiOBHm_Chr6g0251961 RchiOBHm_Chr7g0185821
rosa_laevigata RLG00000005585 RLG00000010281 RLG00000010912 RLG00000030342 RLG00000034281
rosa_multiflora Rmu_sc0000096.1_g000010 Rmu_sc0002481.1_g000045 Rmu_sc0003598.1_g000009 Rmu_sc0003863.1_g000019 Rmu_sc0003973.1_g000002 Rmu_sc0004823.1_g000050 Rmu_sc0005621.1_g000007 Rmu_sc0006537.1_g000030 Rmu_sc0006608.1_g000014 Rmu_sc0008506.1_g000007 Rmu_sc0014428.1_g000001 Rmu_sc0035437.1_g000001 Rmu_ssc0000396.1_g000022
rosa_roxburghii Rroxscaffold_175G00432300 Rroxscaffold_17G00435390 Rroxscaffold_27G00446590 Rroxscaffold_29G00441820 Rroxscaffold_31G00438110 Rroxscaffold_32G00442750 Rroxscaffold_33G00439810 Rroxscaffold_37G00445160 Rroxscaffold_4G00306500 Rroxscaffold_4G00327700 Rroxscaffold_4G00332630 Rroxscaffold_52G00439360 Rroxscaffold_63G00444420 Rroxscaffold_76G00448580 Rroxscaffold_7G00156270
rosa_rugosa Rorug03G0295200
rosa_samantha Rh1BG433700 Rh1CG115400 Rh2AG676300 Rh2CG341800 Rh2DG381400 Rh3BG370100 Rh3BG370200 Rh4AG441600 Rh4BG076500 Rh4BG107400 Rh5BG005600 Rh6BG010100 Rh7BG000200
rosa_wichuraiana Rw0G003820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
AccB1I GGYRCC 2 cut(s) 931, 1278
AccI GTMKAC 3 cut(s) 229, 645, 1217
AciI CCGC 7 cut(s) 255, 398, 482, 773, 1256, 1272, 1294
AclWI GGATC 1 cut(s) 145
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 2 cut(s) 136, 902
AcyI GRCGYC 2 cut(s) 999, 1047
AdeI CACNNNGTG 1 cut(s) 521
AfaI GTAC 3 cut(s) 119, 240, 1091
AfiI CCNNNNNNNGG 5 cut(s) 208, 348, 800, 898, 1261
AgeI ACCGGT 1 cut(s) 928
AgsI TTSAA 8 cut(s) 184, 444, 800, 1015, 1039, 1151, 1156, 1164
AhlI ACTAGT 1 cut(s) 290
AjiI CACGTC 2 cut(s) 433, 1123
AluBI AGCT 4 cut(s) 223, 1068, 1185, 1299
AluI AGCT 4 cut(s) 223, 1068, 1185, 1299
Alw21I GWGCWC 2 cut(s) 147, 526
Alw26I GTCTC 6 cut(s) 31, 203, 296, 348, 840, 1188
Alw44I GTGCAC 1 cut(s) 522
AlwI GGATC 1 cut(s) 145
Ama87I CYCGRG 4 cut(s) 50, 100, 146, 1285
AoxI GGCC 6 cut(s) 104, 210, 267, 479, 631, 1109
ApaLI GTGCAC 1 cut(s) 522
ApoI RAATTY 2 cut(s) 136, 902
AsiGI ACCGGT 1 cut(s) 928
AspA2I CCTAGG 1 cut(s) 892
AspLEI GCGC 1 cut(s) 1267
AspS9I GGNCC 3 cut(s) 104, 210, 479
AsuC2I CCSGG 1 cut(s) 1241
AsuHPI GGTGA 2 cut(s) 557, 774
AvaI CYCGRG 4 cut(s) 50, 100, 146, 1285
AvrII CCTAGG 1 cut(s) 892
BaeGI GKGCMC 3 cut(s) 517, 526, 1128
BanI GGYRCC 2 cut(s) 931, 1278
BanII GRGCYC 2 cut(s) 381, 764
Bbv12I GWGCWC 2 cut(s) 147, 526
BccI CCATC 7 cut(s) 188, 470, 746, 773, 956, 1085, 1185
BceAI ACGGC 2 cut(s) 282, 919
BclI TGATCA 1 cut(s) 910
BcnI CCSGG 1 cut(s) 1241
BcoDI GTCTC 6 cut(s) 31, 203, 296, 348, 840, 1188
BcuI ACTAGT 1 cut(s) 290
BfaI CTAG 6 cut(s) 24, 291, 492, 734, 893, 1073
BisI GCNGC 2 cut(s) 399, 482
BlnI CCTAGG 1 cut(s) 892
BlsI GCNGC 2 cut(s) 400, 483
Bme1390I CCNGG 1 cut(s) 1241
BmeT110I CYCGRG 4 cut(s) 50, 100, 146, 1285
BmgBI CACGTC 2 cut(s) 433, 1123
BmgT120I GGNCC 3 cut(s) 104, 210, 479
BmiI GGNNCC 5 cut(s) 105, 763, 933, 1238, 1280
BmrFI CCNGG 1 cut(s) 1241
BmsI GCATC 2 cut(s) 573, 963
BpuEI CTTGAG 2 cut(s) 77, 1067
BpuMI CCSGG 1 cut(s) 1241
BsaHI GRCGYC 2 cut(s) 999, 1047
BsaI GGTCTC 2 cut(s) 203, 296
BsaJI CCNNGG 9 cut(s) 60, 206, 264, 552, 828, 892, 1128, 1204, 1259
BsaWI WCCGGW 1 cut(s) 928
Bsc4I CCNNNNNNNGG 5 cut(s) 208, 348, 800, 898, 1261
Bse118I RCCGGY 1 cut(s) 928
BseDI CCNNGG 9 cut(s) 60, 206, 264, 552, 828, 892, 1128, 1204, 1259
BseGI GGATG 5 cut(s) 199, 880, 1077, 1173, 1177
BseLI CCNNNNNNNGG 5 cut(s) 208, 348, 800, 898, 1261
BseRI GAGGAG 4 cut(s) 451, 828, 1076, 1115
BseSI GKGCMC 3 cut(s) 517, 526, 1128
BseX3I CGGCCG 1 cut(s) 267
Bsh1285I CGRYCG 1 cut(s) 270
BshFI GGCC 6 cut(s) 106, 212, 269, 481, 633, 1111
BshNI GGYRCC 2 cut(s) 931, 1278
BshTI ACCGGT 1 cut(s) 928
BsiEI CGRYCG 1 cut(s) 270
BsiHKAI GWGCWC 2 cut(s) 147, 526
BsiHKCI CYCGRG 4 cut(s) 50, 100, 146, 1285
BsiSI CCGG 2 cut(s) 929, 1240
BslFI GGGAC 1 cut(s) 1158
BslI CCNNNNNNNGG 5 cut(s) 208, 348, 800, 898, 1261
BsmAI GTCTC 6 cut(s) 31, 203, 296, 348, 840, 1188
BsmFI GGGAC 1 cut(s) 1158
BsmI GAATGC 1 cut(s) 61
BsnI GGCC 6 cut(s) 106, 212, 269, 481, 633, 1111
Bso31I GGTCTC 2 cut(s) 203, 296
BsoBI CYCGRG 4 cut(s) 50, 100, 146, 1285
Bsp1286I GDGCHC 6 cut(s) 147, 381, 517, 526, 764, 1128
Bsp143I GATC 3 cut(s) 150, 605, 910
Bsp19I CCATGG 2 cut(s) 206, 1259
BspACI CCGC 7 cut(s) 255, 398, 482, 773, 1256, 1272, 1294
BspANI GGCC 6 cut(s) 106, 212, 269, 481, 633, 1111
BspLI GGNNCC 5 cut(s) 105, 763, 933, 1238, 1280
BspPI GGATC 1 cut(s) 145
BspT107I GGYRCC 2 cut(s) 931, 1278
BspTNI GGTCTC 2 cut(s) 203, 296
BsrFI RCCGGY 1 cut(s) 928
BssAI RCCGGY 1 cut(s) 928
BssECI CCNNGG 9 cut(s) 60, 206, 264, 552, 828, 892, 1128, 1204, 1259
BssMI GATC 3 cut(s) 150, 605, 910
BssNI GRCGYC 2 cut(s) 999, 1047
BssT1I CCWWGG 5 cut(s) 206, 892, 1128, 1204, 1259
Bst4CI ACNGT 1 cut(s) 829
Bst6I CTCTTC 5 cut(s) 185, 323, 644, 1053, 1151
BstACI GRCGYC 2 cut(s) 999, 1047
BstAPI GCANNNNNTGC 1 cut(s) 521
BstC8I GCNNGC 2 cut(s) 422, 976
BstDEI CTNAG 3 cut(s) 312, 518, 529
BstDSI CCRYGG 4 cut(s) 206, 264, 828, 1259
BstF5I GGATG 5 cut(s) 199, 880, 1077, 1173, 1177
BstHHI GCGC 1 cut(s) 1267
BstKTI GATC 3 cut(s) 153, 608, 913
BstMAI GTCTC 6 cut(s) 31, 203, 296, 348, 840, 1188
BstMBI GATC 3 cut(s) 150, 605, 910
BstMCI CGRYCG 1 cut(s) 270
BstMWI GCNNNNNNNGC 4 cut(s) 103, 521, 1264, 1271
BstNSI RCATGY 1 cut(s) 952
BstSCI CCNGG 1 cut(s) 1239
BstSLI GKGCMC 3 cut(s) 517, 526, 1128
BstX2I RGATCY 1 cut(s) 150
BstYI RGATCY 1 cut(s) 150
BstZI CGGCCG 1 cut(s) 267
BsuRI GGCC 6 cut(s) 106, 212, 269, 481, 633, 1111
BtgI CCRYGG 4 cut(s) 206, 264, 828, 1259
BtrI CACGTC 2 cut(s) 433, 1123
BtsCI GGATG 5 cut(s) 199, 880, 1077, 1173, 1177
Cac8I GCNNGC 2 cut(s) 422, 976
CfoI GCGC 1 cut(s) 1267
Cfr10I RCCGGY 1 cut(s) 928
Cfr13I GGNCC 3 cut(s) 104, 210, 479
CseI GACGC 4 cut(s) 182, 967, 988, 1036
Csp6I GTAC 3 cut(s) 118, 239, 1090
CspAI ACCGGT 1 cut(s) 928
CspCI CAANNNNNGTGG 1 cut(s) 1271
CviAII CATG 7 cut(s) 207, 233, 837, 949, 1222, 1260, 1275
CviQI GTAC 3 cut(s) 118, 239, 1090
DdeI CTNAG 3 cut(s) 312, 518, 529
DpnI GATC 3 cut(s) 152, 607, 912
DpnII GATC 3 cut(s) 150, 605, 910
DraIII CACNNNGTG 1 cut(s) 521
DrdI GACNNNNNNGTC 1 cut(s) 884
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 1 cut(s) 267
EagI CGGCCG 1 cut(s) 267
Eam1104I CTCTTC 5 cut(s) 185, 323, 644, 1053, 1151
EarI CTCTTC 5 cut(s) 185, 323, 644, 1053, 1151
EclXI CGGCCG 1 cut(s) 267
Eco130I CCWWGG 5 cut(s) 206, 892, 1128, 1204, 1259
Eco147I AGGCCT 1 cut(s) 633
Eco24I GRGCYC 2 cut(s) 381, 764
Eco31I GGTCTC 2 cut(s) 203, 296
Eco52I CGGCCG 1 cut(s) 267
Eco88I CYCGRG 4 cut(s) 50, 100, 146, 1285
EcoO109I RGGNCCY 1 cut(s) 104
EcoRI GAATTC 1 cut(s) 902
EcoT14I CCWWGG 5 cut(s) 206, 892, 1128, 1204, 1259
EcoT38I GRGCYC 2 cut(s) 381, 764
ErhI CCWWGG 5 cut(s) 206, 892, 1128, 1204, 1259
FaeI CATG 7 cut(s) 210, 236, 840, 952, 1225, 1263, 1278
FaqI GGGAC 1 cut(s) 1158
FatI CATG 7 cut(s) 206, 232, 836, 948, 1221, 1259, 1274
FauI CCCGC 1 cut(s) 1263
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 3 cut(s) 229, 645, 1217
Fnu4HI GCNGC 2 cut(s) 399, 482
FokI GGATG 5 cut(s) 206, 887, 1064, 1164, 1180
FriOI GRGCYC 2 cut(s) 381, 764
Fsp4HI GCNGC 2 cut(s) 399, 482
FspBI CTAG 6 cut(s) 24, 291, 492, 734, 893, 1073
GlaI GCGC 1 cut(s) 1266
GluI GCNGC 2 cut(s) 399, 482
HaeIII GGCC 6 cut(s) 106, 212, 269, 481, 633, 1111
HapII CCGG 2 cut(s) 929, 1240
HgaI GACGC 4 cut(s) 182, 967, 988, 1036
HhaI GCGC 1 cut(s) 1267
Hin1I GRCGYC 2 cut(s) 999, 1047
Hin1II CATG 7 cut(s) 210, 236, 840, 952, 1225, 1263, 1278
Hin6I GCGC 1 cut(s) 1265
HinP1I GCGC 1 cut(s) 1265
HincII GTYRAC 5 cut(s) 230, 646, 778, 919, 1218
HindII GTYRAC 5 cut(s) 230, 646, 778, 919, 1218
HinfI GANTC 4 cut(s) 535, 808, 816, 1103
HpaI GTTAAC 1 cut(s) 778
HpaII CCGG 2 cut(s) 929, 1240
HphI GGTGA 2 cut(s) 557, 774
Hpy166II GTNNAC 7 cut(s) 230, 524, 646, 675, 778, 919, 1218
Hpy188I TCNGA 2 cut(s) 166, 1182
Hpy188III TCNNGA 8 cut(s) 50, 113, 148, 386, 820, 859, 1039, 1051
Hpy8I GTNNAC 7 cut(s) 230, 524, 646, 675, 778, 919, 1218
Hpy99I CGWCG 5 cut(s) 231, 563, 647, 983, 1124
HpyAV CCTTC 4 cut(s) 81, 313, 557, 1036
HpyCH4III ACNGT 1 cut(s) 829
HpyCH4IV ACGT 4 cut(s) 226, 432, 671, 1122
HpyCH4V TGCA 4 cut(s) 524, 586, 954, 1225
HpyF10VI GCNNNNNNNGC 4 cut(s) 103, 521, 1264, 1271
HpyF3I CTNAG 3 cut(s) 312, 518, 529
HpySE526I ACGT 4 cut(s) 226, 432, 671, 1122
Hsp92I GRCGYC 2 cut(s) 999, 1047
Hsp92II CATG 7 cut(s) 210, 236, 840, 952, 1225, 1263, 1278
HspAI GCGC 1 cut(s) 1265
Ksp22I TGATCA 1 cut(s) 910
KspAI GTTAAC 1 cut(s) 778
Kzo9I GATC 3 cut(s) 150, 605, 910
LmnI GCTCC 3 cut(s) 767, 1236, 1296
LpnPI CCDG 3 cut(s) 91, 942, 1253
LweI GCATC 2 cut(s) 573, 963
MaeI CTAG 6 cut(s) 24, 291, 492, 734, 893, 1073
MaeII ACGT 4 cut(s) 226, 432, 671, 1122
MaeIII GTNAC 1 cut(s) 332
MalI GATC 3 cut(s) 152, 607, 912
MboI GATC 3 cut(s) 150, 605, 910
MboII GAAGA 7 cut(s) 172, 337, 340, 631, 731, 1070, 1168
MfeI CAATTG 2 cut(s) 654, 1226
MflI RGATCY 1 cut(s) 150
MhlI GDGCHC 6 cut(s) 147, 381, 517, 526, 764, 1128
MlyI GAGTC 3 cut(s) 544, 825, 1112
MmeI TCCRAC 4 cut(s) 189, 226, 879, 1214
MseI TTAA 2 cut(s) 32, 777
MslI CAYNNNNRTG 2 cut(s) 543, 929
MspI CCGG 2 cut(s) 929, 1240
MspR9I CCNGG 1 cut(s) 1241
MunI CAATTG 2 cut(s) 654, 1226
Mva1269I GAATGC 1 cut(s) 61
MwoI GCNNNNNNNGC 4 cut(s) 103, 521, 1264, 1271
NciI CCSGG 1 cut(s) 1241
NcoI CCATGG 2 cut(s) 206, 1259
NdeII GATC 3 cut(s) 150, 605, 910
NlaIII CATG 7 cut(s) 210, 236, 840, 952, 1225, 1263, 1278
NlaIV GGNNCC 5 cut(s) 105, 763, 933, 1238, 1280
NmeAIII GCCGAG 2 cut(s) 85, 577
NspI RCATGY 1 cut(s) 952
PaeR7I CTCGAG 1 cut(s) 146
PceI AGGCCT 1 cut(s) 633
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 1 cut(s) 61
PfeI GAWTC 1 cut(s) 808
PinAI ACCGGT 1 cut(s) 928
PkrI GCNGC 2 cut(s) 400, 483
PleI GAGTC 3 cut(s) 543, 824, 1111
PpsI GAGTC 3 cut(s) 543, 824, 1111
PspN4I GGNNCC 5 cut(s) 105, 763, 933, 1238, 1280
PspPI GGNCC 3 cut(s) 104, 210, 479
PsuI RGATCY 1 cut(s) 150
RsaI GTAC 3 cut(s) 119, 240, 1091
RsaNI GTAC 3 cut(s) 118, 239, 1090
RseI CAYNNNNRTG 2 cut(s) 543, 929
SalI GTCGAC 3 cut(s) 228, 644, 1216
SaqAI TTAA 2 cut(s) 32, 777
SatI GCNGC 2 cut(s) 399, 482
Sau3AI GATC 3 cut(s) 150, 605, 910
Sau96I GGNCC 3 cut(s) 104, 210, 479
SchI GAGTC 3 cut(s) 544, 825, 1112
ScrFI CCNGG 1 cut(s) 1241
SduI GDGCHC 6 cut(s) 147, 381, 517, 526, 764, 1128
SfaNI GCATC 2 cut(s) 573, 963
Sfr274I CTCGAG 1 cut(s) 146
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 2 cut(s) 543, 929
SmlI CTYRAG 3 cut(s) 92, 146, 1082
SmoI CTYRAG 3 cut(s) 92, 146, 1082
SpeI ACTAGT 1 cut(s) 290
SseBI AGGCCT 1 cut(s) 633
SsiI CCGC 7 cut(s) 255, 398, 482, 773, 1256, 1272, 1294
SspMI CTAG 6 cut(s) 24, 291, 492, 734, 893, 1073
StuI AGGCCT 1 cut(s) 633
StyD4I CCNGG 1 cut(s) 1239
StyI CCWWGG 5 cut(s) 206, 892, 1128, 1204, 1259
TaaI ACNGT 1 cut(s) 829
TaiI ACGT 4 cut(s) 229, 435, 674, 1125
TaqII GACCGA 1 cut(s) 233
TatI WGTACW 1 cut(s) 117
TauI GCSGC 2 cut(s) 401, 484
TfiI GAWTC 1 cut(s) 808
Tru1I TTAA 2 cut(s) 32, 777
Tru9I TTAA 2 cut(s) 32, 777
TspDTI ATGAA 1 cut(s) 697
VneI GTGCAC 1 cut(s) 522
XapI RAATTY 2 cut(s) 136, 902
XceI RCATGY 1 cut(s) 952
XhoI CTCGAG 1 cut(s) 146
XmaJI CCTAGG 1 cut(s) 892
XmiI GTMKAC 3 cut(s) 229, 645, 1217
XspI CTAG 6 cut(s) 24, 291, 492, 734, 893, 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.