FvH4_6g15222
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000385
Physical Location & Seq
Reverse (-)
9463072 .. 9464544
1473 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g15222.t1

Sequence Viewer

Length: 1473 bp
ATGCCGGGAGGAATGACAAAGCAACAAAAATTTGATTGGTATGACCAAATGCTTGGTGAACTTGCGGGAGTCCCTGATAGATTGATTGACATCACCTCCACGCTAGACCGTGTCGACCTGGATGAACTGGCGGCACGAGTCAATGACCTTGGGGAATTGAGAGGGCGAGTTGCAGCCCTAGACCGCGTCGACCTGGATGAGTTGGCGGCGCGAGTCAATGACCTTGAAAGACTGAAAGGGCGAGTTACGGCCCTTGAAAAGGTGAAAGCTCCAAGACTCGATGTAGAGACCGAGAGAGATGGAGGTTCTGTTTCACAAGAGCAGATGGGGGCGATGGGTGATGCCCTCGAAACTCTACAAGTGACTATGGACACCATGGCTGAGGATGTCCGAGCCACTATTGATGCATTCAAGAACGAGCTGTTGGAGATGAATACCAAGCTCAATCTAGCTATCCGGGCGATGAGTAACCAACCTGTGACGGACTACAGGAGGGTAAAGATCCCGGAACCTCAAACTTACGGAGGGGCGCGAGACGCCAAGGAGCTTGAGAATTTTCTATTTGATATGGAGCAATACTTCCGAGCAGTGAAGCCGGATTCAGAAGAAGCAAAAGTGGGCGTGGCGACAATGTATTTGTCGGGTGATGCGAAACTGTGGTGGAGAACAAAATACAACGACATCCAGAGGAATGTCTGTACCATTGCCACATGGGAGGACCTGAAGAAAGAGCTGAAGATGCAGTTCTTCCCAGAGAATGTGGACTACATTGCAAGACGACAGTTGAGAGAGCTGAAGCACACCAACAACATTAGAGAGTTTGTGAGCAAATTCTCTGTGCTCATGCTCGATCTCCCGGATATGTCGGAGAAGGACCGACTATTCTATTTCCTCGAGGGGTTAAAGCCGTGGGCTAGAACTGAACTTCAGAGACAAAGGGTTCAAGATTTGGCTTCTGCTCAAGCAGCAGCTGAAAGGTTGACAGACTACACTTTTGAAGAAAACCCTCCCAAAAGGACCTCATCCTTTTCAAATGTGAATGCCAACAAAAGTGTGAGACCAGGACAGAGTAGAAGTGGGGGAGCGGAGTCAAAGTTCTCCAGTTTCGGAGGGGGAAGGATGACCAATGTAAGGGATACAGCCTCTTCCAAACCGGCTGCATCAACAGGAGTATTTCCCCCACGACAATTCAACTCCGCCGGCTTCACACCAAGACCTATATCTTGCTTCTTATGCAAGGGGCCTCATAGGGTGAATGAGTGTCCACACAAGACGGCCTTGACAGCCCTACAAGCCCACATTTCGGCGAAGGAGTCTGAGGAACCCCAAGAGGAAGTGGAGGAACCTAGTCAGATGGGTGCTTTGAGATTCTTGAACGCAGTGGAAAAGCAACCACCCGTGTCCCAAGAGTCTCAGCCTAAGGGCCTAATGTTTGTGGATGGGAGCATAAACGGAAGGTTGCCAAGAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo RVT_1 Retrotrans_gag gag-asp_proteas

Protein Analysis

491

Amino Acids

55.2

Weight (kDa)

5.64

Isoelectric Point (pI)

43.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 168 - 346 6.1e-12 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 208 - 303 2.2e-16 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000385)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23713 FvH4_1g25744 FvH4_2g00261 FvH4_2g00262 FvH4_2g15681 FvH4_2g17851 FvH4_2g35550 FvH4_3g05280 FvH4_3g10531 FvH4_3g25910 FvH4_3g28953 FvH4_3g33371 FvH4_3g33536 FvH4_3g36090 FvH4_4g03471 FvH4_4g03480 FvH4_4g06701 FvH4_4g19351 FvH4_4g34281 FvH4_5g00040 FvH4_5g03811 FvH4_5g03812 FvH4_5g11822 FvH4_5g30921 FvH4_5g31701 FvH4_6g12161 FvH4_6g15222 FvH4_6g15223 FvH4_6g17701 FvH4_6g17710 FvH4_6g19301 FvH4_6g33011 FvH4_6g34501 FvH4_6g50161 FvH4_7g04111 FvH4_7g04120 FvH4_7g04121 FvH4_7g04122 FvH4_7g04123 FvH4_7g28231 FvH4_c7g00010
malus_domestica MD12G1084200.v1.1
prunus_persica Prupe.1G206200_v2.0.a1 Prupe.8G085600_v2.0.a1
pyrus_communis pycom01g11080 pycom02g20500 pycom09g18370 pycom12555g00210 pycom13g23120 pycom14g10590 pycom16g17620 pycom16g22750
rosa_chinensis RchiOBHm_Chr2g0137481 RchiOBHm_Chr6g0251961 RchiOBHm_Chr7g0185821
rosa_laevigata RLG00000005585 RLG00000010281 RLG00000010912 RLG00000030342 RLG00000034281
rosa_multiflora Rmu_sc0000096.1_g000010 Rmu_sc0002481.1_g000045 Rmu_sc0003598.1_g000009 Rmu_sc0003863.1_g000019 Rmu_sc0003973.1_g000002 Rmu_sc0004823.1_g000050 Rmu_sc0005621.1_g000007 Rmu_sc0006537.1_g000030 Rmu_sc0006608.1_g000014 Rmu_sc0008506.1_g000007 Rmu_sc0014428.1_g000001 Rmu_sc0035437.1_g000001 Rmu_ssc0000396.1_g000022
rosa_roxburghii Rroxscaffold_175G00432300 Rroxscaffold_17G00435390 Rroxscaffold_27G00446590 Rroxscaffold_29G00441820 Rroxscaffold_31G00438110 Rroxscaffold_32G00442750 Rroxscaffold_33G00439810 Rroxscaffold_37G00445160 Rroxscaffold_4G00306500 Rroxscaffold_4G00327700 Rroxscaffold_4G00332630 Rroxscaffold_52G00439360 Rroxscaffold_63G00444420 Rroxscaffold_76G00448580 Rroxscaffold_7G00156270
rosa_rugosa Rorug03G0295200
rosa_samantha Rh1BG433700 Rh1CG115400 Rh2AG676300 Rh2CG341800 Rh2DG381400 Rh3BG370100 Rh3BG370200 Rh4AG441600 Rh4BG076500 Rh4BG107400 Rh5BG005600 Rh6BG010100 Rh7BG000200
rosa_wichuraiana Rw0G003820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 893
AccBSI CCGCTC 1 cut(s) 1085
AccI GTMKAC 2 cut(s) 114, 189
AccII CGCG 3 cut(s) 186, 211, 532
AciI CCGC 6 cut(s) 65, 131, 184, 206, 1085, 1197
AclWI GGATC 1 cut(s) 496
AcsI RAATTY 3 cut(s) 29, 553, 830
AcuI CTGAAG 4 cut(s) 743, 755, 815, 911
AcyI GRCGYC 1 cut(s) 537
AfaI GTAC 1 cut(s) 700
AfiI CCNNNNNNNGG 3 cut(s) 259, 1131, 1303
AgsI TTSAA 8 cut(s) 227, 257, 412, 944, 998, 1032, 1192, 1375
AjnI CCWGG 3 cut(s) 117, 192, 1060
AjuI GAANNNNNNNTTGG 2 cut(s) 407, 439
AloI GAACNNNNNNTCC 2 cut(s) 1079, 1111
AluBI AGCT 8 cut(s) 269, 421, 442, 452, 547, 733, 793, 971
AluI AGCT 8 cut(s) 269, 421, 442, 452, 547, 733, 793, 971
Alw21I GWGCWC 1 cut(s) 843
Alw26I GTCTC 5 cut(s) 281, 528, 925, 1051, 1416
AlwI GGATC 1 cut(s) 496
AlwNI CAGNNNCTG 1 cut(s) 971
Ama87I CYCGRG 1 cut(s) 893
AoxI GGCC 4 cut(s) 249, 1241, 1275, 1423
ApeKI GCWGC 4 cut(s) 173, 965, 968, 1157
ApoI RAATTY 3 cut(s) 29, 553, 830
ArsI GACNNNNNNTTYG 4 cut(s) 619, 651, 977, 1009
AspLEI GCGC 2 cut(s) 211, 532
AspS9I GGNCC 6 cut(s) 250, 718, 874, 1017, 1241, 1423
AsuC2I CCSGG 4 cut(s) 6, 458, 506, 857
AsuHPI GGTGA 6 cut(s) 68, 85, 274, 350, 656, 1264
AvaI CYCGRG 1 cut(s) 893
AvaII GGWCC 3 cut(s) 718, 874, 1017
AxyI CCTNAGG 1 cut(s) 1419
BauI CACGAG 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 843
BbvCI CCTCAGC 1 cut(s) 381
BbvI GCAGC 4 cut(s) 185, 977, 980, 1144
BccI CCATC 5 cut(s) 293, 319, 328, 1348, 1433
BceAI ACGGC 3 cut(s) 264, 892, 1290
BciT130I CCWGG 3 cut(s) 119, 194, 1062
BciVI GTATCC 1 cut(s) 1129
BcnI CCSGG 4 cut(s) 6, 458, 506, 857
BcoDI GTCTC 5 cut(s) 281, 528, 925, 1051, 1416
BfaI CTAG 5 cut(s) 104, 179, 449, 915, 1347
BfmI CTRYAG 1 cut(s) 487
BfuI GTATCC 1 cut(s) 1129
BisI GCNGC 6 cut(s) 132, 174, 207, 966, 969, 1158
BlsI GCNGC 6 cut(s) 133, 175, 208, 967, 970, 1159
Bme1390I CCNGG 7 cut(s) 6, 119, 194, 458, 506, 857, 1062
Bme18I GGWCC 3 cut(s) 718, 874, 1017
BmeT110I CYCGRG 1 cut(s) 893
BmgT120I GGNCC 6 cut(s) 250, 718, 874, 1017, 1241, 1423
BmiI GGNNCC 4 cut(s) 510, 1242, 1323, 1344
BmrFI CCNGG 7 cut(s) 6, 119, 194, 458, 506, 857, 1062
BmsI GCATC 5 cut(s) 331, 394, 637, 729, 1169
BpmI CTGGAG 1 cut(s) 1084
Bpu10I CCTNAGC 1 cut(s) 381
BpuEI CTTGAG 2 cut(s) 569, 945
BpuMI CCSGG 4 cut(s) 6, 458, 506, 857
BsaBI GATNNNNATC 1 cut(s) 89
BsaHI GRCGYC 1 cut(s) 537
BsaI GGTCTC 2 cut(s) 281, 1051
BsaJI CCNNGG 4 cut(s) 148, 375, 540, 908
BsaXI ACNNNNNCTCC 6 cut(s) 80, 110, 294, 324, 1079, 1109
Bsc4I CCNNNNNNNGG 3 cut(s) 259, 1131, 1303
Bse118I RCCGGY 2 cut(s) 1153, 1199
Bse1I ACTGG 2 cut(s) 132, 1101
Bse21I CCTNAGG 1 cut(s) 1419
Bse3DI GCAATG 2 cut(s) 702, 768
Bse8I GATNNNNATC 1 cut(s) 89
BseBI CCWGG 3 cut(s) 119, 194, 1062
BseDI CCNNGG 4 cut(s) 148, 375, 540, 908
BseGI GGATG 7 cut(s) 127, 202, 391, 681, 1022, 1125, 1444
BseJI GATNNNNATC 1 cut(s) 89
BseLI CCNNNNNNNGG 3 cut(s) 259, 1131, 1303
BseMI GCAATG 2 cut(s) 702, 768
BseMII CTCAG 3 cut(s) 372, 1308, 1427
BseNI ACTGG 2 cut(s) 132, 1101
BseXI GCAGC 4 cut(s) 185, 977, 980, 1144
Bsh1236I CGCG 3 cut(s) 186, 211, 532
BshFI GGCC 4 cut(s) 251, 1243, 1277, 1425
BsiHKAI GWGCWC 1 cut(s) 843
BsiHKCI CYCGRG 1 cut(s) 893
BsiSI CCGG 7 cut(s) 5, 457, 506, 596, 857, 1154, 1200
BslFI GGGAC 2 cut(s) 56, 1387
BslI CCNNNNNNNGG 3 cut(s) 259, 1131, 1303
BsmAI GTCTC 5 cut(s) 281, 528, 925, 1051, 1416
BsmBI CGTCTC 1 cut(s) 528
BsmFI GGGAC 2 cut(s) 56, 1387
BsmI GAATGC 2 cut(s) 407, 1045
BsnI GGCC 4 cut(s) 251, 1243, 1277, 1425
Bso31I GGTCTC 2 cut(s) 281, 1051
BsoBI CYCGRG 1 cut(s) 893
Bsp1286I GDGCHC 1 cut(s) 843
Bsp143I GATC 2 cut(s) 501, 850
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 6 cut(s) 65, 131, 184, 206, 1085, 1197
BspANI GGCC 4 cut(s) 251, 1243, 1277, 1425
BspCNI CTCAG 3 cut(s) 373, 1309, 1426
BspFNI CGCG 3 cut(s) 186, 211, 532
BspLI GGNNCC 4 cut(s) 510, 1242, 1323, 1344
BspPI GGATC 1 cut(s) 496
BspTNI GGTCTC 2 cut(s) 281, 1051
BsrBI CCGCTC 1 cut(s) 1085
BsrDI GCAATG 2 cut(s) 702, 768
BsrFI RCCGGY 2 cut(s) 1153, 1199
BsrI ACTGG 2 cut(s) 132, 1101
BssAI RCCGGY 2 cut(s) 1153, 1199
BssECI CCNNGG 4 cut(s) 148, 375, 540, 908
BssMI GATC 2 cut(s) 501, 850
BssNI GRCGYC 1 cut(s) 537
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 3 cut(s) 148, 375, 540
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 3 cut(s) 119, 194, 1062
Bst4CI ACNGT 3 cut(s) 110, 657, 783
Bst6I CTCTTC 1 cut(s) 1150
BstACI GRCGYC 1 cut(s) 537
BstC8I GCNNGC 1 cut(s) 1201
BstDEI CTNAG 4 cut(s) 381, 1317, 1413, 1419
BstDSI CCRYGG 2 cut(s) 375, 908
BstENI CCTNNNNNAGG 1 cut(s) 257
BstF5I GGATG 7 cut(s) 127, 202, 391, 681, 1022, 1125, 1444
BstFNI CGCG 3 cut(s) 186, 211, 532
BstHHI GCGC 2 cut(s) 211, 532
BstKTI GATC 2 cut(s) 504, 853
BstMAI GTCTC 5 cut(s) 281, 528, 925, 1051, 1416
BstMBI GATC 2 cut(s) 501, 850
BstMWI GCNNNNNNNGC 7 cut(s) 458, 536, 739, 965, 1233, 1283, 1292
BstNI CCWGG 3 cut(s) 119, 194, 1062
BstSCI CCNGG 7 cut(s) 4, 117, 192, 456, 504, 855, 1060
BstSFI CTRYAG 1 cut(s) 487
BstUI CGCG 3 cut(s) 186, 211, 532
BstV1I GCAGC 4 cut(s) 185, 977, 980, 1144
BstX2I RGATCY 1 cut(s) 501
BstXI CCANNNNNNTGG 1 cut(s) 53
BstYI RGATCY 1 cut(s) 501
Bsu36I CCTNAGG 1 cut(s) 1419
BsuI GTATCC 1 cut(s) 1129
BsuRI GGCC 4 cut(s) 251, 1243, 1277, 1425
BtgI CCRYGG 2 cut(s) 375, 908
BtgZI GCGATG 2 cut(s) 347, 476
BtsCI GGATG 7 cut(s) 127, 202, 391, 681, 1022, 1125, 1444
BtsI GCAGTG 2 cut(s) 594, 1386
BtsIMutI CAGTG 2 cut(s) 594, 1386
Cac8I GCNNGC 1 cut(s) 1201
CaiI CAGNNNCTG 1 cut(s) 971
CfoI GCGC 2 cut(s) 211, 532
Cfr10I RCCGGY 2 cut(s) 1153, 1199
Cfr13I GGNCC 6 cut(s) 250, 718, 874, 1017, 1241, 1423
CseI GACGC 2 cut(s) 175, 545
Csp6I GTAC 1 cut(s) 699
CviAII CATG 3 cut(s) 376, 711, 844
CviQI GTAC 1 cut(s) 699
DdeI CTNAG 4 cut(s) 381, 1317, 1413, 1419
DpnI GATC 2 cut(s) 503, 852
DpnII GATC 2 cut(s) 501, 850
Eam1104I CTCTTC 1 cut(s) 1150
EarI CTCTTC 1 cut(s) 1150
EciI GGCGGA 1 cut(s) 1186
Eco130I CCWWGG 3 cut(s) 148, 375, 540
Eco31I GGTCTC 2 cut(s) 281, 1051
Eco47I GGWCC 3 cut(s) 718, 874, 1017
Eco57I CTGAAG 4 cut(s) 743, 755, 815, 911
Eco81I CCTNAGG 1 cut(s) 1419
Eco88I CYCGRG 1 cut(s) 893
EcoNI CCTNNNNNAGG 1 cut(s) 257
EcoO109I RGGNCCY 4 cut(s) 718, 1017, 1241, 1423
EcoRII CCWGG 3 cut(s) 117, 192, 1060
EcoT14I CCWWGG 3 cut(s) 148, 375, 540
EcoT22I ATGCAT 1 cut(s) 409
ErhI CCWWGG 3 cut(s) 148, 375, 540
Esp3I CGTCTC 1 cut(s) 528
FaeI CATG 3 cut(s) 379, 714, 847
FalI AAGNNNNNCTT 2 cut(s) 1262, 1294
FaqI GGGAC 2 cut(s) 56, 1387
FatI CATG 3 cut(s) 375, 710, 843
FauI CCCGC 1 cut(s) 58
FblI GTMKAC 2 cut(s) 114, 189
Fnu4HI GCNGC 6 cut(s) 132, 174, 207, 966, 969, 1158
FokI GGATG 7 cut(s) 134, 209, 398, 668, 1009, 1132, 1451
Fsp4HI GCNGC 6 cut(s) 132, 174, 207, 966, 969, 1158
FspBI CTAG 5 cut(s) 104, 179, 449, 915, 1347
GlaI GCGC 2 cut(s) 210, 531
GluI GCNGC 6 cut(s) 132, 174, 207, 966, 969, 1158
GsuI CTGGAG 1 cut(s) 1084
HaeIII GGCC 4 cut(s) 251, 1243, 1277, 1425
HapII CCGG 7 cut(s) 5, 457, 506, 596, 857, 1154, 1200
HgaI GACGC 2 cut(s) 175, 545
HhaI GCGC 2 cut(s) 211, 532
Hin1I GRCGYC 1 cut(s) 537
Hin1II CATG 3 cut(s) 379, 714, 847
Hin6I GCGC 2 cut(s) 209, 530
HinP1I GCGC 2 cut(s) 209, 530
HincII GTYRAC 3 cut(s) 115, 190, 981
HindII GTYRAC 3 cut(s) 115, 190, 981
HinfI GANTC 9 cut(s) 69, 138, 213, 276, 599, 1088, 1313, 1368, 1409
HpaII CCGG 7 cut(s) 5, 457, 506, 596, 857, 1154, 1200
HphI GGTGA 6 cut(s) 68, 85, 274, 350, 656, 1264
Hpy166II GTNNAC 6 cut(s) 59, 115, 190, 763, 981, 1265
Hpy188I TCNGA 8 cut(s) 392, 584, 604, 868, 930, 1109, 1318, 1353
Hpy188III TCNNGA 4 cut(s) 412, 685, 944, 1372
Hpy8I GTNNAC 6 cut(s) 59, 115, 190, 763, 981, 1265
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 4 cut(s) 865, 1110, 1303, 1449
HpyCH4III ACNGT 3 cut(s) 110, 657, 783
HpyCH4V TGCA 6 cut(s) 173, 407, 742, 773, 1160, 1236
HpyF10VI GCNNNNNNNGC 7 cut(s) 458, 536, 739, 965, 1233, 1283, 1292
HpyF3I CTNAG 4 cut(s) 381, 1317, 1413, 1419
Hsp92I GRCGYC 1 cut(s) 537
Hsp92II CATG 3 cut(s) 379, 714, 847
HspAI GCGC 2 cut(s) 209, 530
KroI GCCGGC 1 cut(s) 1199
KroNI GCCGGC 1 cut(s) 1201
Kzo9I GATC 2 cut(s) 501, 850
LmnI GCTCC 5 cut(s) 274, 544, 571, 1082, 1443
Lsp1109I GCAGC 4 cut(s) 185, 977, 980, 1144
LweI GCATC 5 cut(s) 331, 394, 637, 729, 1169
MaeI CTAG 5 cut(s) 104, 179, 449, 915, 1347
MaeIII GTNAC 4 cut(s) 244, 361, 467, 478
MalI GATC 2 cut(s) 503, 852
MbiI CCGCTC 1 cut(s) 1085
MboI GATC 2 cut(s) 501, 850
MboII GAAGA 6 cut(s) 617, 736, 739, 748, 1010, 1137
MflI RGATCY 1 cut(s) 501
MhlI GDGCHC 1 cut(s) 843
MluCI AATT 5 cut(s) 29, 155, 553, 830, 1187
MlyI GAGTC 7 cut(s) 78, 147, 222, 270, 1097, 1322, 1418
MmeI TCCRAC 2 cut(s) 405, 846
Mph1103I ATGCAT 1 cut(s) 409
MroNI GCCGGC 1 cut(s) 1199
MseI TTAA 1 cut(s) 902
MspA1I CMGCKG 1 cut(s) 971
MspI CCGG 7 cut(s) 5, 457, 506, 596, 857, 1154, 1200
MspR9I CCNGG 7 cut(s) 6, 119, 194, 458, 506, 857, 1062
Mva1269I GAATGC 2 cut(s) 407, 1045
MvaI CCWGG 3 cut(s) 119, 194, 1062
MvnI CGCG 3 cut(s) 186, 211, 532
MwoI GCNNNNNNNGC 7 cut(s) 458, 536, 739, 965, 1233, 1283, 1292
NaeI GCCGGC 1 cut(s) 1201
NciI CCSGG 4 cut(s) 6, 458, 506, 857
NcoI CCATGG 1 cut(s) 375
NdeII GATC 2 cut(s) 501, 850
NgoMIV GCCGGC 1 cut(s) 1199
NlaIII CATG 3 cut(s) 379, 714, 847
NlaIV GGNNCC 4 cut(s) 510, 1242, 1323, 1344
NmuCI GTSAC 2 cut(s) 361, 478
NsiI ATGCAT 1 cut(s) 409
PaeR7I CTCGAG 1 cut(s) 893
PcsI WCGNNNNNNNCGW 1 cut(s) 647
PctI GAATGC 2 cut(s) 407, 1045
PdiI GCCGGC 1 cut(s) 1201
PfeI GAWTC 2 cut(s) 599, 1368
PflFI GACNNNGTC 2 cut(s) 110, 185
PfoI TCCNGGA 2 cut(s) 504, 855
PkrI GCNGC 6 cut(s) 133, 175, 208, 967, 970, 1159
PleI GAGTC 7 cut(s) 77, 146, 221, 270, 1096, 1321, 1417
PpsI GAGTC 7 cut(s) 77, 146, 221, 270, 1096, 1321, 1417
PpuMI RGGWCCY 2 cut(s) 718, 1017
Psp5II RGGWCCY 2 cut(s) 718, 1017
Psp6I CCWGG 3 cut(s) 117, 192, 1060
PspGI CCWGG 3 cut(s) 117, 192, 1060
PspN4I GGNNCC 4 cut(s) 510, 1242, 1323, 1344
PspPI GGNCC 6 cut(s) 250, 718, 874, 1017, 1241, 1423
PspPPI RGGWCCY 2 cut(s) 718, 1017
PspXI VCTCGAGB 1 cut(s) 893
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 1 cut(s) 501
PsyI GACNNNGTC 2 cut(s) 110, 185
PvuII CAGCTG 1 cut(s) 971
RsaI GTAC 1 cut(s) 700
RsaNI GTAC 1 cut(s) 699
SalI GTCGAC 2 cut(s) 113, 188
SaqAI TTAA 1 cut(s) 902
SatI GCNGC 6 cut(s) 132, 174, 207, 966, 969, 1158
Sau3AI GATC 2 cut(s) 501, 850
Sau96I GGNCC 6 cut(s) 250, 718, 874, 1017, 1241, 1423
SchI GAGTC 7 cut(s) 78, 147, 222, 270, 1097, 1322, 1418
ScrFI CCNGG 7 cut(s) 6, 119, 194, 458, 506, 857, 1062
SduI GDGCHC 1 cut(s) 843
SfaNI GCATC 5 cut(s) 331, 394, 637, 729, 1169
SfcI CTRYAG 1 cut(s) 487
Sfr274I CTCGAG 1 cut(s) 893
SinI GGWCC 3 cut(s) 718, 874, 1017
SlaI CTCGAG 1 cut(s) 893
SmlI CTYRAG 3 cut(s) 548, 893, 960
SmoI CTYRAG 3 cut(s) 548, 893, 960
Sse9I AATT 5 cut(s) 29, 155, 553, 830, 1187
SsiI CCGC 6 cut(s) 65, 131, 184, 206, 1085, 1197
SspMI CTAG 5 cut(s) 104, 179, 449, 915, 1347
StyD4I CCNGG 7 cut(s) 4, 117, 192, 456, 504, 855, 1060
StyI CCWWGG 3 cut(s) 148, 375, 540
TaaI ACNGT 3 cut(s) 110, 657, 783
TaqI TCGA 6 cut(s) 114, 189, 279, 348, 849, 894
TaqII GACCGA 2 cut(s) 305, 891
TasI AATT 5 cut(s) 29, 155, 553, 830, 1187
TauI GCSGC 2 cut(s) 134, 209
TfiI GAWTC 2 cut(s) 599, 1368
Tru1I TTAA 1 cut(s) 902
Tru9I TTAA 1 cut(s) 902
TscAI CASTG 2 cut(s) 594, 1386
TseFI GTSAC 2 cut(s) 361, 478
TseI GCWGC 4 cut(s) 173, 965, 968, 1157
Tsp45I GTSAC 2 cut(s) 361, 478
TspDTI ATGAA 2 cut(s) 138, 446
TspGWI ACGGA 3 cut(s) 497, 537, 1467
TspRI CASTG 2 cut(s) 594, 1386
Tth111I GACNNNGTC 2 cut(s) 110, 185
VpaK11BI GGWCC 3 cut(s) 718, 874, 1017
XagI CCTNNNNNAGG 1 cut(s) 257
XapI RAATTY 3 cut(s) 29, 553, 830
XhoI CTCGAG 1 cut(s) 893
XmiI GTMKAC 2 cut(s) 114, 189
XspI CTAG 5 cut(s) 104, 179, 449, 915, 1347
Zsp2I ATGCAT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.