Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 115 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 180 |
| AfaI | GTAC | 3 cut(s) | 48, 145, 242 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 180 |
| AgsI | TTSAA | 2 cut(s) | 167, 223 |
| AjnI | CCWGG | 2 cut(s) | 111, 179 |
| AoxI | GGCC | 2 cut(s) | 195, 245 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| BanI | GGYRCC | 1 cut(s) | 115 |
| BbsI | GAAGAC | 1 cut(s) | 106 |
| BciT130I | CCWGG | 2 cut(s) | 113, 181 |
| Bme1390I | CCNGG | 2 cut(s) | 113, 181 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmiI | GGNNCC | 1 cut(s) | 117 |
| BmrFI | CCNGG | 2 cut(s) | 113, 181 |
| BpiI | GAAGAC | 1 cut(s) | 106 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 224, 254 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseBI | CCWGG | 2 cut(s) | 113, 181 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseRI | GAGGAG | 1 cut(s) | 248 |
| BseYI | CCCAGC | 1 cut(s) | 147 |
| BshFI | GGCC | 2 cut(s) | 197, 247 |
| BshNI | GGYRCC | 1 cut(s) | 115 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BsnI | GGCC | 2 cut(s) | 197, 247 |
| BspANI | GGCC | 2 cut(s) | 197, 247 |
| BspLI | GGNNCC | 1 cut(s) | 117 |
| BspT107I | GGYRCC | 1 cut(s) | 115 |
| Bst2UI | CCWGG | 2 cut(s) | 113, 181 |
| BstC8I | GCNNGC | 1 cut(s) | 132 |
| BstNI | CCWGG | 2 cut(s) | 113, 181 |
| BstSCI | CCNGG | 2 cut(s) | 111, 179 |
| BstV2I | GAAGAC | 1 cut(s) | 106 |
| BsuRI | GGCC | 2 cut(s) | 197, 247 |
| Cac8I | GCNNGC | 1 cut(s) | 132 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| Csp6I | GTAC | 3 cut(s) | 47, 144, 241 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 187, 222 |
| CviAII | CATG | 1 cut(s) | 37 |
| CviJI | RGCY | 4 cut(s) | 53, 134, 197, 247 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 134, 197, 247 |
| CviQI | GTAC | 3 cut(s) | 47, 144, 241 |
| EcoRII | CCWGG | 2 cut(s) | 111, 179 |
| FaeI | CATG | 1 cut(s) | 40 |
| FaiI | YATR | 2 cut(s) | 12, 38 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 91, 123 |
| FatI | CATG | 1 cut(s) | 36 |
| GsaI | CCCAGC | 1 cut(s) | 151 |
| HaeIII | GGCC | 2 cut(s) | 197, 247 |
| Hin1II | CATG | 1 cut(s) | 40 |
| Hpy166II | GTNNAC | 1 cut(s) | 144 |
| Hpy8I | GTNNAC | 1 cut(s) | 144 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyAV | CCTTC | 2 cut(s) | 76, 221 |
| HpyCH4V | TGCA | 1 cut(s) | 209 |
| Hsp92II | CATG | 1 cut(s) | 40 |
| LpnPI | CCDG | 5 cut(s) | 98, 125, 161, 166, 193 |
| MboII | GAAGA | 2 cut(s) | 111, 196 |
| MluCI | AATT | 2 cut(s) | 162, 167 |
| MnlI | CCTC | 3 cut(s) | 120, 187, 226 |
| MseI | TTAA | 1 cut(s) | 215 |
| MspR9I | CCNGG | 2 cut(s) | 113, 181 |
| MvaI | CCWGG | 2 cut(s) | 113, 181 |
| NlaIII | CATG | 1 cut(s) | 40 |
| NlaIV | GGNNCC | 1 cut(s) | 117 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 12 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 180 |
| PfoI | TCCNGGA | 1 cut(s) | 179 |
| Psp6I | CCWGG | 2 cut(s) | 111, 179 |
| PspFI | CCCAGC | 1 cut(s) | 147 |
| PspGI | CCWGG | 2 cut(s) | 111, 179 |
| PspN4I | GGNNCC | 1 cut(s) | 117 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| RsaI | GTAC | 3 cut(s) | 48, 145, 242 |
| RsaNI | GTAC | 3 cut(s) | 47, 144, 241 |
| SaqAI | TTAA | 1 cut(s) | 215 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| ScrFI | CCNGG | 2 cut(s) | 113, 181 |
| SetI | ASST | 3 cut(s) | 48, 109, 215 |
| Sse9I | AATT | 2 cut(s) | 162, 167 |
| SspI | AATATT | 1 cut(s) | 76 |
| StyD4I | CCNGG | 2 cut(s) | 111, 179 |
| TasI | AATT | 2 cut(s) | 162, 167 |
| Tru1I | TTAA | 1 cut(s) | 215 |
| Tru9I | TTAA | 1 cut(s) | 215 |
| TspDTI | ATGAA | 2 cut(s) | 25, 240 |
| TspGWI | ACGGA | 1 cut(s) | 111 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 180 |