FvH4_6g01270

F-Box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000369
Physical Location & Seq
Reverse (-)
688006 .. 690613
2608 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01270.t1

Sequence Viewer

Length: 1602 bp
ATGAAGATCTGCACAAGAAAAAAACGTTTAAAGGTTTCCGGTAGCTACAATTCTATGAACGAAGATGTCCTAGTAGAGATTCTGTCAAAGTTACCAGTAAAGTCTCTAATTAGGTTTCGTTGCGTATCACAAGAATGGAATGCTCTTACAAAAAACACACACTTCATTGCCAGACACCTTAGTTGCTCTGATCCTAATCGATATGTTTTCCTTGATCGCCTTGATCGCCTTGCTGGAAACGATGGAAATAAGACCAGATTATATGGAATGTCACTGCTTCAGGATGATGGGGAAAAAGCTAAATTTACGAGTTTAGATTTGTCTTTCTTCAACCATAAAAGCTGGTTCGCTGTAGATTATCTGGGATCAAGTAATGGCTTAGTTTGCCTTCTGCTGGAAGATGAGAATTGCATTACAAAGGAAAGGGAAGATTCAATAGTAGTATGTAACCCAGCGACGAGAGACTTTAGGTATCTTCCTACACCTACTCCTTTTAGGAAGAAGGGAGATTGGCCTCTTCTGTGTTTTGAATTCATGCGTGACAGTAGGGAATTCAAATTGGCGAGTATTTTCCCATATGTTTCTGATAATGGATCAGAAGTAGGTTTAACGTTTCAAGCCCAAGTGTTCACCCAAAGTACAAATTCTTGGAGGCAAGTTATAAACAAATTAGAATTTCCATCATCCAAACGTGATTGTCATACACATTCATCAAAATCCTTGAACGGGGTGATGTATTGGGCGGCAAAGGATACTAAATCGAACGAGAACTATGCTTTGTCTTTCGATATATATGATGAGGTCTTCCATGTGATAGACCTACCGATGCTGCGGGTACCCGAAAATGTTCATCTGAGAAACCGACCTTCATTCCTCATATGGAAAAATTCACTTGCAATGCTACGACCTTCACTACCAACTGGATACTACCAAGAGCTTTGGGTGATGACCAAGAGTGGAACAACATCGACATTTTCTTGGACTCGACAACTCAGGATGCGAACCTCATCAATTCCTTCAGGGCGCCTCATGGGATTTCTGAATGAACAATTACTTCTCAAAGCATGGAAAGAAATCCTTATTTTGTATGACCCAGAGACTAAGAAAATGAGAAAGATTCCTACACATAAATCAGCCAAAAGGGAGGCCAGAGAGAACTCGACAATTAGACCAGTGATTTTGGGTTTGAGAGAAAGATATCGAGTGGTGGTGGTGCGGGAGCATCGAAACGTCGTCGTCTTGCTGCGTATGCGGCTGGTGGCCACCGACGTTGAGATGGCCAAAACAAGTACTGAAATTCGAGGGCCTAATGGCTGGAATGAATCCACTGCATTTGAAGAGTTTTTGATGCTTGCTTTCGAGCTTCATATGTGCAAAGCAAGCCAGAACGACGCGTGTCTAGGCGTTGATGTGTATGTGGGTGTTAGTGGGTCGTGGGGCCCACCATCGGGTCATGGGGGCCCAACCAGAAGAAGAGAAAAAGGCGCCGGGTTCTGCACACTGTTGAGCTCCGAGAACGAAACGACGTCGCAGCCGATTCAGCTCCTTGCTGGCTTGCTCGATCTCCGGTGGGGGTTTTCGGTAGTGTTAGTTAAACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

534

Amino Acids

61.08

Weight (kDa)

9.34

Isoelectric Point (pI)

39.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 55 3.3e-08 F-box domain
FBA_3 PF08268 99 - 384 1.7e-15 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 108 - 278 3.6e-06 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 137 - 370 1.3e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000369)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12960 FvH4_1g13711 FvH4_1g13821 FvH4_1g13851 FvH4_2g14150 FvH4_2g21221 FvH4_2g29121 FvH4_5g08370 FvH4_6g01270 FvH4_6g01284 FvH4_6g17580
malus_domestica MD14G1060300.v1.1 MD17G1230300.v1.1
prunus_persica Prupe.3G110000_v2.0.a1 Prupe.3G110000_v2.0.a1 Prupe.3G110000_v2.0.a1 Prupe.3G110000_v2.0.a1 Prupe.3G110000_v2.0.a1 Prupe.6G256100_v2.0.a1
pyrus_communis pycom17g23320
rosa_chinensis RchiOBHm_Chr1g0317281 RchiOBHm_Chr2g0158871 RchiOBHm_Chr3g0471851 RchiOBHm_Chr6g0287731 RchiOBHm_Chr6g0287821 RchiOBHm_Chr7g0183811
rosa_laevigata RLG00000005018 RLG00000005021 RLG00000012470 RLG00000017037 RLG00000021119 RLG00000024124 RLG00000029577 RLG00000030613 RLG00000030616
rosa_multiflora Rmu_sc0000423.1_g000029 Rmu_sc0002267.1_g000011 Rmu_sc0003335.1_g000004 Rmu_sc0003610.1_g000042 Rmu_sc0003877.1_g000013 Rmu_sc0005698.1_g000001 Rmu_sc0007593.1_g000004 Rmu_sc0013966.1_g000003 Rmu_sc0015519.1_g000001
rosa_roxburghii Rroxscaffold_2G00141640 Rroxscaffold_3G00270160 Rroxscaffold_3G00270190 Rroxscaffold_4G00327520 Rroxscaffold_6G00409480 Rroxscaffold_7G00180790 Rroxscaffold_7G00181110 Rroxscaffold_7G00181180 Rroxscaffold_7G00181240
rosa_rugosa Rorug01G0015500 Rorug02G0095300 Rorug02G0473000 Rorug03G0120700 Rorug06G0191300 Rorug06G0191500 Rorug06G0460600 Rorug06G0461000
rosa_samantha Rh1AG026600 Rh1BG022800 Rh1DG047100 Rh1DG054100 Rh2AG142300 Rh2AG142400 Rh2BG147400 Rh2BG147500 Rh2BG551700 Rh2CG148700 Rh2CG148800 Rh2CG522400 Rh2DG148000 Rh2DG148100 Rh2DG561500 Rh3AG172000 Rh3BG197400 Rh3CG188400 Rh3CG196000 Rh3DG176900 Rh6AG301500 Rh6AG301800 Rh6BG307300 Rh6BG307800 Rh6DG299000 Rh6DG299200 Rh6DG300300 Rh6DG300400 Rh7AG061300 Rh7AG061700 Rh7BG061300 Rh7BG061400 Rh7BG061800 Rh7CG063000 Rh7CG063200 Rh7CG063300 Rh7DG061400
rosa_wichuraiana Rw1G001850 Rw2G011170 Rw2G044620 Rw3G016850 Rw6G026030 Rw6G026070 Rw7G005090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 662
AatII GACGTC 1 cut(s) 1529
Acc65I GGTACC 1 cut(s) 835
AccB1I GGYRCC 3 cut(s) 835, 1023, 1484
AccII CGCG 1 cut(s) 1394
AciI CCGC 4 cut(s) 743, 832, 1216, 1252
AclI AACGTT 2 cut(s) 25, 611
AclWI GGATC 3 cut(s) 185, 373, 601
AcoI YGGCCR 2 cut(s) 1260, 1278
AcsI RAATTY 7 cut(s) 302, 530, 551, 643, 674, 886, 1296
AcuI CTGAAG 2 cut(s) 263, 1002
AcyI GRCGYC 3 cut(s) 1024, 1485, 1526
AfaI GTAC 3 cut(s) 640, 837, 1291
AfiI CCNNNNNNNGG 4 cut(s) 394, 726, 1447, 1448
AflIII ACRYGT 1 cut(s) 1392
AgsI TTSAA 7 cut(s) 331, 435, 530, 556, 617, 724, 1337
AluBI AGCT 7 cut(s) 45, 299, 342, 937, 1363, 1509, 1543
AluI AGCT 7 cut(s) 45, 299, 342, 937, 1363, 1509, 1543
Alw21I GWGCWC 1 cut(s) 1511
Alw26I GTCTC 3 cut(s) 108, 456, 1091
AlwI GGATC 3 cut(s) 185, 373, 601
AoxI GGCC 7 cut(s) 512, 1146, 1260, 1278, 1304, 1438, 1459
ApaI GGGCCC 2 cut(s) 1442, 1463
ApeKI GCWGC 3 cut(s) 829, 1243, 1531
ApoI RAATTY 7 cut(s) 302, 530, 551, 643, 674, 886, 1296
Asp700I GAANNNNTTC 1 cut(s) 846
Asp718I GGTACC 1 cut(s) 835
AspLEI GCGC 2 cut(s) 1026, 1487
AspS9I GGNCC 5 cut(s) 1304, 1438, 1439, 1459, 1460
AsuC2I CCSGG 1 cut(s) 1489
AsuHPI GGTGA 3 cut(s) 622, 742, 955
BaeGI GKGCMC 2 cut(s) 1442, 1463
BalI TGGCCA 2 cut(s) 1262, 1280
BanI GGYRCC 3 cut(s) 835, 1023, 1484
BanII GRGCYC 3 cut(s) 1442, 1463, 1511
BbsI GAAGAC 1 cut(s) 796
Bbv12I GWGCWC 1 cut(s) 1511
BbvI GCAGC 3 cut(s) 816, 1230, 1543
BccI CCATC 5 cut(s) 236, 281, 688, 1270, 1453
BcgI CGANNNNNNTGC 2 cut(s) 755, 789
BciVI GTATCC 2 cut(s) 745, 917
BcnI CCSGG 1 cut(s) 1489
BcoDI GTCTC 3 cut(s) 108, 456, 1091
BfaI CTAG 2 cut(s) 71, 1400
BfmI CTRYAG 1 cut(s) 351
BfoI RGCGCY 2 cut(s) 1027, 1488
BfuI GTATCC 2 cut(s) 745, 917
BglII AGATCT 1 cut(s) 6
BisI GCNGC 5 cut(s) 744, 830, 1244, 1253, 1532
BlsI GCNGC 5 cut(s) 745, 831, 1245, 1254, 1533
BmcAI AGTACT 1 cut(s) 1291
Bme1390I CCNGG 1 cut(s) 1489
BmgT120I GGNCC 5 cut(s) 1304, 1438, 1439, 1459, 1460
BmiI GGNNCC 7 cut(s) 837, 1025, 1439, 1440, 1460, 1461, 1486
BmrFI CCNGG 1 cut(s) 1489
BmsI GCATC 4 cut(s) 816, 987, 1231, 1338
BoxI GACNNNNGTC 1 cut(s) 1395
BpiI GAAGAC 1 cut(s) 796
BpuMI CCSGG 1 cut(s) 1489
Bsa29I ATCGAT 1 cut(s) 199
BsaBI GATNNNNATC 1 cut(s) 195
BsaHI GRCGYC 3 cut(s) 1024, 1485, 1526
BsaWI WCCGGW 2 cut(s) 38, 1566
BsaXI ACNNNNNCTCC 2 cut(s) 472, 502
Bsc4I CCNNNNNNNGG 4 cut(s) 394, 726, 1447, 1448
Bse1I ACTGG 3 cut(s) 95, 925, 1172
Bse3DI GCAATG 2 cut(s) 165, 903
Bse8I GATNNNNATC 1 cut(s) 195
BseCI ATCGAT 1 cut(s) 199
BseGI GGATG 3 cut(s) 289, 683, 1002
BseJI GATNNNNATC 1 cut(s) 195
BseLI CCNNNNNNNGG 4 cut(s) 394, 726, 1447, 1448
BseMI GCAATG 2 cut(s) 165, 903
BseMII CTCAG 2 cut(s) 845, 1006
BseNI ACTGG 3 cut(s) 95, 925, 1172
BseSI GKGCMC 2 cut(s) 1442, 1463
BseXI GCAGC 3 cut(s) 816, 1230, 1543
BseYI CCCAGC 1 cut(s) 451
BsgI GTGCAG 1 cut(s) 1480
Bsh1236I CGCG 1 cut(s) 1394
BshFI GGCC 7 cut(s) 514, 1148, 1262, 1280, 1306, 1440, 1461
BshNI GGYRCC 3 cut(s) 835, 1023, 1484
BshVI ATCGAT 1 cut(s) 199
BsiHKAI GWGCWC 1 cut(s) 1511
BsiSI CCGG 3 cut(s) 39, 1488, 1567
BslI CCNNNNNNNGG 4 cut(s) 394, 726, 1447, 1448
BsmAI GTCTC 3 cut(s) 108, 456, 1091
BsmI GAATGC 1 cut(s) 145
BsnI GGCC 7 cut(s) 514, 1148, 1262, 1280, 1306, 1440, 1461
Bsp120I GGGCCC 2 cut(s) 1438, 1459
Bsp1286I GDGCHC 3 cut(s) 1442, 1463, 1511
Bsp143I GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
BspACI CCGC 4 cut(s) 743, 832, 1216, 1252
BspANI GGCC 7 cut(s) 514, 1148, 1262, 1280, 1306, 1440, 1461
BspCNI CTCAG 2 cut(s) 846, 1005
BspDI ATCGAT 1 cut(s) 199
BspFNI CGCG 1 cut(s) 1394
BspLI GGNNCC 7 cut(s) 837, 1025, 1439, 1440, 1460, 1461, 1486
BspPI GGATC 3 cut(s) 185, 373, 601
BspT107I GGYRCC 3 cut(s) 835, 1023, 1484
BsrDI GCAATG 2 cut(s) 165, 903
BsrI ACTGG 3 cut(s) 95, 925, 1172
BssMI GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
BssNI GRCGYC 3 cut(s) 1024, 1485, 1526
Bst4CI ACNGT 2 cut(s) 545, 1503
Bst6I CTCTTC 3 cut(s) 522, 1332, 1468
BstACI GRCGYC 3 cut(s) 1024, 1485, 1526
BstC8I GCNNGC 4 cut(s) 1353, 1381, 1552, 1556
BstDEI CTNAG 5 cut(s) 179, 379, 854, 992, 1101
BstF5I GGATG 3 cut(s) 289, 683, 1002
BstFNI CGCG 1 cut(s) 1394
BstH2I RGCGCY 2 cut(s) 1027, 1488
BstHHI GCGC 2 cut(s) 1026, 1487
BstKTI GATC 7 cut(s) 9, 193, 217, 226, 368, 596, 1564
BstMAI GTCTC 3 cut(s) 108, 456, 1091
BstMBI GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
BstMWI GCNNNNNNNGC 6 cut(s) 225, 384, 1249, 1252, 1380, 1540
BstPAI GACNNNNGTC 1 cut(s) 1395
BstSCI CCNGG 1 cut(s) 1487
BstSFI CTRYAG 1 cut(s) 351
BstSLI GKGCMC 2 cut(s) 1442, 1463
BstUI CGCG 1 cut(s) 1394
BstV1I GCAGC 3 cut(s) 816, 1230, 1543
BstV2I GAAGAC 1 cut(s) 796
BstX2I RGATCY 1 cut(s) 6
BstYI RGATCY 1 cut(s) 6
Bsu15I ATCGAT 1 cut(s) 199
BsuI GTATCC 2 cut(s) 745, 917
BsuRI GGCC 7 cut(s) 514, 1148, 1262, 1280, 1306, 1440, 1461
BsuTUI ATCGAT 1 cut(s) 199
BtsCI GGATG 3 cut(s) 289, 683, 1002
BtsI GCAGTG 2 cut(s) 272, 1326
BtsIMutI CAGTG 4 cut(s) 272, 1179, 1326, 1499
Cac8I GCNNGC 4 cut(s) 1353, 1381, 1552, 1556
CfoI GCGC 2 cut(s) 1026, 1487
Cfr13I GGNCC 5 cut(s) 1304, 1438, 1439, 1459, 1460
ClaI ATCGAT 1 cut(s) 199
CseI GACGC 1 cut(s) 1400
Csp6I GTAC 3 cut(s) 639, 836, 1290
CspCI CAANNNNNGTGG 4 cut(s) 1252, 1287, 1315, 1350
CviAII CATG 5 cut(s) 535, 809, 1030, 1065, 1454
CviQI GTAC 3 cut(s) 639, 836, 1290
DdeI CTNAG 5 cut(s) 179, 379, 854, 992, 1101
DinI GGCGCC 2 cut(s) 1025, 1486
DpnI GATC 7 cut(s) 8, 192, 216, 225, 367, 595, 1563
DpnII GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
DraI TTTAAA 1 cut(s) 30
EaeI YGGCCR 2 cut(s) 1260, 1278
Eam1104I CTCTTC 3 cut(s) 522, 1332, 1468
EarI CTCTTC 3 cut(s) 522, 1332, 1468
Ecl136II GAGCTC 1 cut(s) 1509
Eco24I GRGCYC 3 cut(s) 1442, 1463, 1511
Eco32I GATATC 1 cut(s) 1199
Eco53kI GAGCTC 1 cut(s) 1509
Eco57I CTGAAG 2 cut(s) 263, 1002
EcoICRI GAGCTC 1 cut(s) 1509
EcoO109I RGGNCCY 3 cut(s) 1304, 1438, 1459
EcoRI GAATTC 2 cut(s) 530, 551
EcoRV GATATC 1 cut(s) 1199
EcoT38I GRGCYC 3 cut(s) 1442, 1463, 1511
EgeI GGCGCC 2 cut(s) 1025, 1486
EheI GGCGCC 2 cut(s) 1025, 1486
FaeI CATG 5 cut(s) 538, 812, 1033, 1068, 1457
FalI AAGNNNNNCTT 2 cut(s) 1062, 1094
FatI CATG 5 cut(s) 534, 808, 1029, 1064, 1453
FauI CCCGC 2 cut(s) 825, 1209
FauNDI CATATG 3 cut(s) 577, 878, 1368
Fnu4HI GCNGC 5 cut(s) 744, 830, 1244, 1253, 1532
FokI GGATG 3 cut(s) 296, 670, 1009
FriOI GRGCYC 3 cut(s) 1442, 1463, 1511
Fsp4HI GCNGC 5 cut(s) 744, 830, 1244, 1253, 1532
FspBI CTAG 2 cut(s) 71, 1400
GlaI GCGC 2 cut(s) 1025, 1486
GluI GCNGC 5 cut(s) 744, 830, 1244, 1253, 1532
GsaI CCCAGC 1 cut(s) 455
HaeII RGCGCY 2 cut(s) 1027, 1488
HaeIII GGCC 7 cut(s) 514, 1148, 1262, 1280, 1306, 1440, 1461
HapII CCGG 3 cut(s) 39, 1488, 1567
HgaI GACGC 1 cut(s) 1400
HhaI GCGC 2 cut(s) 1026, 1487
Hin1I GRCGYC 3 cut(s) 1024, 1485, 1526
Hin1II CATG 5 cut(s) 538, 812, 1033, 1068, 1457
Hin6I GCGC 2 cut(s) 1024, 1485
HinP1I GCGC 2 cut(s) 1024, 1485
HinfI GANTC 6 cut(s) 79, 431, 982, 1117, 1322, 1537
HpaII CCGG 3 cut(s) 39, 1488, 1567
HphI GGTGA 3 cut(s) 622, 742, 955
Hpy166II GTNNAC 1 cut(s) 630
Hpy188I TCNGA 6 cut(s) 190, 586, 598, 855, 1041, 1513
Hpy188III TCNNGA 2 cut(s) 281, 994
Hpy8I GTNNAC 1 cut(s) 630
Hpy99I CGWCG 7 cut(s) 460, 1235, 1238, 1271, 1394, 1528, 1531
HpyAV CCTTC 5 cut(s) 398, 496, 876, 918, 1026
HpyCH4III ACNGT 2 cut(s) 545, 1503
HpyCH4IV ACGT 6 cut(s) 25, 611, 691, 1230, 1269, 1526
HpyCH4V TGCA 6 cut(s) 12, 411, 896, 1331, 1374, 1497
HpyF10VI GCNNNNNNNGC 6 cut(s) 225, 384, 1249, 1252, 1380, 1540
HpyF3I CTNAG 5 cut(s) 179, 379, 854, 992, 1101
HpySE526I ACGT 6 cut(s) 25, 611, 691, 1230, 1269, 1526
Hsp92I GRCGYC 3 cut(s) 1024, 1485, 1526
Hsp92II CATG 5 cut(s) 538, 812, 1033, 1068, 1457
HspAI GCGC 2 cut(s) 1024, 1485
KasI GGCGCC 2 cut(s) 1023, 1484
KpnI GGTACC 1 cut(s) 839
Kzo9I GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
LmnI GCTCC 3 cut(s) 1219, 1514, 1548
Lsp1109I GCAGC 3 cut(s) 816, 1230, 1543
LweI GCATC 4 cut(s) 816, 987, 1231, 1338
MaeI CTAG 2 cut(s) 71, 1400
MaeII ACGT 6 cut(s) 25, 611, 691, 1230, 1269, 1526
MaeIII GTNAC 4 cut(s) 90, 270, 446, 539
MalI GATC 7 cut(s) 8, 192, 216, 225, 367, 595, 1563
MboI GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
MflI RGATCY 1 cut(s) 6
MhlI GDGCHC 3 cut(s) 1442, 1463, 1511
MlsI TGGCCA 2 cut(s) 1262, 1280
MluI ACGCGT 1 cut(s) 1392
MluNI TGGCCA 2 cut(s) 1262, 1280
Mly113I GGCGCC 2 cut(s) 1024, 1485
MlyI GAGTC 1 cut(s) 976
MnlI CCTC 8 cut(s) 525, 645, 793, 884, 1015, 1037, 1138, 1295
Mox20I TGGCCA 2 cut(s) 1262, 1280
MroXI GAANNNNTTC 1 cut(s) 846
MscI TGGCCA 2 cut(s) 1262, 1280
MseI TTAA 3 cut(s) 29, 608, 1593
MslI CAYNNNNRTG 1 cut(s) 133
Msp20I TGGCCA 2 cut(s) 1262, 1280
MspI CCGG 3 cut(s) 39, 1488, 1567
MspR9I CCNGG 1 cut(s) 1489
Mva1269I GAATGC 1 cut(s) 145
MvnI CGCG 1 cut(s) 1394
MwoI GCNNNNNNNGC 6 cut(s) 225, 384, 1249, 1252, 1380, 1540
NarI GGCGCC 2 cut(s) 1024, 1485
NciI CCSGG 1 cut(s) 1489
NdeI CATATG 3 cut(s) 577, 878, 1368
NdeII GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
NlaIII CATG 5 cut(s) 538, 812, 1033, 1068, 1457
NlaIV GGNNCC 7 cut(s) 837, 1025, 1439, 1440, 1460, 1461, 1486
NmuCI GTSAC 2 cut(s) 270, 539
PcsI WCGNNNNNNNCGW 1 cut(s) 1532
PctI GAATGC 1 cut(s) 145
PdmI GAANNNNTTC 1 cut(s) 846
PfeI GAWTC 5 cut(s) 79, 431, 1117, 1322, 1537
PkrI GCNGC 5 cut(s) 745, 831, 1245, 1254, 1533
PleI GAGTC 1 cut(s) 976
PluTI GGCGCC 2 cut(s) 1027, 1488
PpsI GAGTC 1 cut(s) 976
PshAI GACNNNNGTC 1 cut(s) 1395
PsiI TTATAA 1 cut(s) 662
Psp124BI GAGCTC 1 cut(s) 1511
Psp1406I AACGTT 2 cut(s) 25, 611
PspFI CCCAGC 1 cut(s) 451
PspN4I GGNNCC 7 cut(s) 837, 1025, 1439, 1440, 1460, 1461, 1486
PspOMI GGGCCC 2 cut(s) 1438, 1459
PspPI GGNCC 5 cut(s) 1304, 1438, 1439, 1459, 1460
PsuI RGATCY 1 cut(s) 6
RsaI GTAC 3 cut(s) 640, 837, 1291
RsaNI GTAC 3 cut(s) 639, 836, 1290
RseI CAYNNNNRTG 1 cut(s) 133
SacI GAGCTC 1 cut(s) 1511
SaqAI TTAA 3 cut(s) 29, 608, 1593
SatI GCNGC 5 cut(s) 744, 830, 1244, 1253, 1532
Sau3AI GATC 7 cut(s) 6, 190, 214, 223, 365, 593, 1561
Sau96I GGNCC 5 cut(s) 1304, 1438, 1439, 1459, 1460
ScaI AGTACT 1 cut(s) 1291
SchI GAGTC 1 cut(s) 976
ScrFI CCNGG 1 cut(s) 1489
SduI GDGCHC 3 cut(s) 1442, 1463, 1511
SfaNI GCATC 4 cut(s) 816, 987, 1231, 1338
SfcI CTRYAG 1 cut(s) 351
SfoI GGCGCC 2 cut(s) 1025, 1486
SmiMI CAYNNNNRTG 1 cut(s) 133
SsiI CCGC 4 cut(s) 743, 832, 1216, 1252
SspDI GGCGCC 2 cut(s) 1023, 1484
SspMI CTAG 2 cut(s) 71, 1400
SstI GAGCTC 1 cut(s) 1511
StyD4I CCNGG 1 cut(s) 1487
TaaI ACNGT 2 cut(s) 545, 1503
TaiI ACGT 6 cut(s) 28, 614, 694, 1233, 1272, 1529
TatI WGTACW 2 cut(s) 638, 1289
TauI GCSGC 2 cut(s) 746, 1255
TfiI GAWTC 5 cut(s) 79, 431, 1117, 1322, 1537
Tru1I TTAA 3 cut(s) 29, 608, 1593
Tru9I TTAA 3 cut(s) 29, 608, 1593
TscAI CASTG 4 cut(s) 279, 1179, 1333, 1506
TseFI GTSAC 2 cut(s) 270, 539
TseI GCWGC 3 cut(s) 829, 1243, 1531
Tsp45I GTSAC 2 cut(s) 270, 539
TspRI CASTG 4 cut(s) 279, 1179, 1333, 1506
XapI RAATTY 7 cut(s) 302, 530, 551, 643, 674, 886, 1296
XmnI GAANNNNTTC 1 cut(s) 846
XspI CTAG 2 cut(s) 71, 1400
ZraI GACGTC 1 cut(s) 1527
ZrmI AGTACT 1 cut(s) 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.