F-Box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBA_3 | PF08268 | 174 - 355 | 3e-20 | F-box associated beta propeller domain |
| FBA_1 | PF07734 | 203 - 391 | 2.2e-19 | F-box associated beta propeller domain |
| FBA_3 | PF08268 | 449 - 630 | 3e-20 | F-box associated beta propeller domain |
| FBA_1 | PF07734 | 478 - 666 | 2.2e-19 | F-box associated beta propeller domain |
| FBA_3 | PF08268 | 724 - 905 | 3e-20 | F-box associated beta propeller domain |
| FBA_1 | PF07734 | 753 - 929 | 2.5e-19 | F-box associated beta propeller domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 330 |
| AccB1I | GGYRCC | 1 cut(s) | 2917 |
| AccB7I | CCANNNNNTGG | 6 cut(s) | 458, 810, 1283, 1635, 2108, 2460 |
| AccII | CGCG | 3 cut(s) | 388, 1213, 2038 |
| AciI | CCGC | 3 cut(s) | 436, 1261, 2086 |
| AclI | AACGTT | 3 cut(s) | 605, 1430, 2255 |
| AcsI | RAATTY | 7 cut(s) | 175, 688, 1164, 1513, 1989, 2338, 2814 |
| AflII | CTTAAG | 1 cut(s) | 2848 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1143, 1175, 1968, 2000, 2793, 2825 |
| AluBI | AGCT | 4 cut(s) | 88, 100, 109, 334 |
| AluI | AGCT | 4 cut(s) | 88, 100, 109, 334 |
| Alw26I | GTCTC | 1 cut(s) | 2913 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 133 |
| AoxI | GGCC | 3 cut(s) | 922, 1747, 2572 |
| ApeKI | GCWGC | 4 cut(s) | 334, 485, 1310, 2135 |
| ApoI | RAATTY | 7 cut(s) | 175, 688, 1164, 1513, 1989, 2338, 2814 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 130, 162 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 527, 1352, 2177 |
| AspLEI | GCGC | 3 cut(s) | 390, 1215, 2040 |
| AspS9I | GGNCC | 9 cut(s) | 906, 922, 1110, 1731, 1747, 1935, 2556, 2572, 2760 |
| AsuII | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| AvaII | GGWCC | 6 cut(s) | 906, 1110, 1731, 1935, 2556, 2760 |
| BanI | GGYRCC | 1 cut(s) | 2917 |
| BbvI | GCAGC | 4 cut(s) | 321, 497, 1322, 2147 |
| BccI | CCATC | 7 cut(s) | 245, 702, 847, 1527, 1672, 2352, 2497 |
| BceAI | ACGGC | 4 cut(s) | 909, 1734, 2559, 2905 |
| BciVI | GTATCC | 3 cut(s) | 846, 1671, 2496 |
| BclI | TGATCA | 3 cut(s) | 367, 1192, 2017 |
| BcoDI | GTCTC | 1 cut(s) | 2913 |
| BfaI | CTAG | 9 cut(s) | 473, 555, 1028, 1298, 1380, 1853, 2123, 2205, 2678 |
| BfrI | CTTAAG | 1 cut(s) | 2848 |
| BfuI | GTATCC | 3 cut(s) | 846, 1671, 2496 |
| BisI | GCNGC | 4 cut(s) | 335, 486, 1311, 2136 |
| BlsI | GCNGC | 4 cut(s) | 336, 487, 1312, 2137 |
| BmcAI | AGTACT | 1 cut(s) | 2832 |
| Bme18I | GGWCC | 6 cut(s) | 906, 1110, 1731, 1935, 2556, 2760 |
| BmgT120I | GGNCC | 9 cut(s) | 906, 922, 1110, 1731, 1747, 1935, 2556, 2572, 2760 |
| BmiI | GGNNCC | 4 cut(s) | 638, 1463, 2288, 2919 |
| Bpu10I | CCTNAGC | 1 cut(s) | 101 |
| Bpu14I | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| BpuEI | CTTGAG | 3 cut(s) | 701, 1526, 2351 |
| BsaBI | GATNNNNATC | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| Bse1I | ACTGG | 1 cut(s) | 2919 |
| Bse3DI | GCAATG | 2 cut(s) | 73, 238 |
| Bse8I | GATNNNNATC | 1 cut(s) | 129 |
| BseDI | CCNNGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| BseGI | GGATG | 1 cut(s) | 256 |
| BseJI | GATNNNNATC | 1 cut(s) | 129 |
| BseMI | GCAATG | 2 cut(s) | 73, 238 |
| BseNI | ACTGG | 1 cut(s) | 2919 |
| BseRI | GAGGAG | 1 cut(s) | 230 |
| BseXI | GCAGC | 4 cut(s) | 321, 497, 1322, 2147 |
| BseYI | CCCAGC | 3 cut(s) | 640, 1465, 2290 |
| BsgI | GTGCAG | 3 cut(s) | 639, 1464, 2289 |
| Bsh1236I | CGCG | 3 cut(s) | 388, 1213, 2038 |
| BshFI | GGCC | 3 cut(s) | 924, 1749, 2574 |
| BshNI | GGYRCC | 1 cut(s) | 2917 |
| BslFI | GGGAC | 1 cut(s) | 107 |
| BsmAI | GTCTC | 1 cut(s) | 2913 |
| BsmBI | CGTCTC | 1 cut(s) | 2913 |
| BsmFI | GGGAC | 1 cut(s) | 107 |
| BsnI | GGCC | 3 cut(s) | 924, 1749, 2574 |
| Bsp119I | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| BspACI | CCGC | 3 cut(s) | 436, 1261, 2086 |
| BspANI | GGCC | 3 cut(s) | 924, 1749, 2574 |
| BspFNI | CGCG | 3 cut(s) | 388, 1213, 2038 |
| BspHI | TCATGA | 3 cut(s) | 415, 1240, 2065 |
| BspLI | GGNNCC | 4 cut(s) | 638, 1463, 2288, 2919 |
| BspQI | GCTCTTC | 1 cut(s) | 32 |
| BspT104I | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| BspT107I | GGYRCC | 1 cut(s) | 2917 |
| BspTI | CTTAAG | 1 cut(s) | 2848 |
| BsrDI | GCAATG | 2 cut(s) | 73, 238 |
| BsrI | ACTGG | 1 cut(s) | 2919 |
| BssECI | CCNNGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| BssT1I | CCWWGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| Bst4CI | ACNGT | 4 cut(s) | 292, 654, 1479, 2304 |
| Bst6I | CTCTTC | 8 cut(s) | 32, 207, 412, 1146, 1237, 1971, 2062, 2796 |
| BstAFI | CTTAAG | 1 cut(s) | 2848 |
| BstBI | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| BstDEI | CTNAG | 4 cut(s) | 101, 565, 1390, 2215 |
| BstF5I | GGATG | 1 cut(s) | 256 |
| BstFNI | CGCG | 3 cut(s) | 388, 1213, 2038 |
| BstHHI | GCGC | 3 cut(s) | 390, 1215, 2040 |
| BstMAI | GTCTC | 1 cut(s) | 2913 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 106, 228 |
| BstUI | CGCG | 3 cut(s) | 388, 1213, 2038 |
| BstV1I | GCAGC | 4 cut(s) | 321, 497, 1322, 2147 |
| BstX2I | RGATCY | 6 cut(s) | 551, 914, 1376, 1739, 2201, 2564 |
| BstYI | RGATCY | 6 cut(s) | 551, 914, 1376, 1739, 2201, 2564 |
| BsuI | GTATCC | 3 cut(s) | 846, 1671, 2496 |
| BsuRI | GGCC | 3 cut(s) | 924, 1749, 2574 |
| BtsCI | GGATG | 1 cut(s) | 256 |
| CaiI | CAGNNNCTG | 1 cut(s) | 133 |
| CciI | TCATGA | 3 cut(s) | 415, 1240, 2065 |
| CfoI | GCGC | 3 cut(s) | 390, 1215, 2040 |
| Cfr13I | GGNCC | 9 cut(s) | 906, 922, 1110, 1731, 1747, 1935, 2556, 2572, 2760 |
| DdeI | CTNAG | 4 cut(s) | 101, 565, 1390, 2215 |
| Eam1104I | CTCTTC | 8 cut(s) | 32, 207, 412, 1146, 1237, 1971, 2062, 2796 |
| EarI | CTCTTC | 8 cut(s) | 32, 207, 412, 1146, 1237, 1971, 2062, 2796 |
| Eco130I | CCWWGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| Eco47I | GGWCC | 6 cut(s) | 906, 1110, 1731, 1935, 2556, 2760 |
| EcoT14I | CCWWGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| EcoT22I | ATGCAT | 1 cut(s) | 67 |
| ErhI | CCWWGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| Esp3I | CGTCTC | 1 cut(s) | 2913 |
| FaqI | GGGAC | 1 cut(s) | 107 |
| FbaI | TGATCA | 3 cut(s) | 367, 1192, 2017 |
| Fnu4HI | GCNGC | 4 cut(s) | 335, 486, 1311, 2136 |
| FokI | GGATG | 1 cut(s) | 263 |
| Fsp4HI | GCNGC | 4 cut(s) | 335, 486, 1311, 2136 |
| FspBI | CTAG | 9 cut(s) | 473, 555, 1028, 1298, 1380, 1853, 2123, 2205, 2678 |
| GlaI | GCGC | 3 cut(s) | 389, 1214, 2039 |
| GluI | GCNGC | 4 cut(s) | 335, 486, 1311, 2136 |
| GsaI | CCCAGC | 3 cut(s) | 644, 1469, 2294 |
| HaeIII | GGCC | 3 cut(s) | 924, 1749, 2574 |
| HhaI | GCGC | 3 cut(s) | 390, 1215, 2040 |
| Hin6I | GCGC | 3 cut(s) | 388, 1213, 2038 |
| HinP1I | GCGC | 3 cut(s) | 388, 1213, 2038 |
| HindIII | AAGCTT | 2 cut(s) | 86, 98 |
| Hpy166II | GTNNAC | 4 cut(s) | 138, 537, 1362, 2187 |
| Hpy188I | TCNGA | 4 cut(s) | 129, 1078, 1903, 2728 |
| Hpy8I | GTNNAC | 4 cut(s) | 138, 537, 1362, 2187 |
| Hpy99I | CGWCG | 5 cut(s) | 350, 388, 1213, 2038, 2908 |
| HpyCH4III | ACNGT | 4 cut(s) | 292, 654, 1479, 2304 |
| HpyCH4IV | ACGT | 5 cut(s) | 348, 605, 1430, 2255, 2903 |
| HpyCH4V | TGCA | 5 cut(s) | 29, 65, 620, 1445, 2270 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 106, 228 |
| HpyF3I | CTNAG | 4 cut(s) | 101, 565, 1390, 2215 |
| HpySE526I | ACGT | 5 cut(s) | 348, 605, 1430, 2255, 2903 |
| HspAI | GCGC | 3 cut(s) | 388, 1213, 2038 |
| Ksp22I | TGATCA | 3 cut(s) | 367, 1192, 2017 |
| LguI | GCTCTTC | 1 cut(s) | 32 |
| Lsp1109I | GCAGC | 4 cut(s) | 321, 497, 1322, 2147 |
| MaeI | CTAG | 9 cut(s) | 473, 555, 1028, 1298, 1380, 1853, 2123, 2205, 2678 |
| MaeII | ACGT | 5 cut(s) | 348, 605, 1430, 2255, 2903 |
| MaeIII | GTNAC | 6 cut(s) | 731, 1088, 1556, 1913, 2381, 2738 |
| MflI | RGATCY | 6 cut(s) | 551, 914, 1376, 1739, 2201, 2564 |
| MlyI | GAGTC | 3 cut(s) | 1067, 1892, 2717 |
| Mph1103I | ATGCAT | 1 cut(s) | 67 |
| MroXI | GAANNNNTTC | 3 cut(s) | 527, 1352, 2177 |
| MseI | TTAA | 6 cut(s) | 56, 354, 762, 1587, 2412, 2849 |
| MslI | CAYNNNNRTG | 3 cut(s) | 420, 1245, 2070 |
| MspCI | CTTAAG | 1 cut(s) | 2848 |
| MvnI | CGCG | 3 cut(s) | 388, 1213, 2038 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 106, 228 |
| NlaIV | GGNNCC | 4 cut(s) | 638, 1463, 2288, 2919 |
| NmuCI | GTSAC | 6 cut(s) | 731, 1088, 1556, 1913, 2381, 2738 |
| NsiI | ATGCAT | 1 cut(s) | 67 |
| NspV | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| PagI | TCATGA | 3 cut(s) | 415, 1240, 2065 |
| PciSI | GCTCTTC | 1 cut(s) | 32 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 703, 741, 1528, 1566, 2353, 2391 |
| PdmI | GAANNNNTTC | 3 cut(s) | 527, 1352, 2177 |
| PflMI | CCANNNNNTGG | 6 cut(s) | 458, 810, 1283, 1635, 2108, 2460 |
| PkrI | GCNGC | 4 cut(s) | 336, 487, 1312, 2137 |
| PleI | GAGTC | 3 cut(s) | 1067, 1892, 2717 |
| PpsI | GAGTC | 3 cut(s) | 1067, 1892, 2717 |
| PsiI | TTATAA | 1 cut(s) | 330 |
| Psp1406I | AACGTT | 3 cut(s) | 605, 1430, 2255 |
| PspFI | CCCAGC | 3 cut(s) | 640, 1465, 2290 |
| PspN4I | GGNNCC | 4 cut(s) | 638, 1463, 2288, 2919 |
| PspPI | GGNCC | 9 cut(s) | 906, 922, 1110, 1731, 1747, 1935, 2556, 2572, 2760 |
| PstNI | CAGNNNCTG | 1 cut(s) | 133 |
| PsuI | RGATCY | 6 cut(s) | 551, 914, 1376, 1739, 2201, 2564 |
| RseI | CAYNNNNRTG | 3 cut(s) | 420, 1245, 2070 |
| SapI | GCTCTTC | 1 cut(s) | 32 |
| SaqAI | TTAA | 6 cut(s) | 56, 354, 762, 1587, 2412, 2849 |
| SatI | GCNGC | 4 cut(s) | 335, 486, 1311, 2136 |
| Sau96I | GGNCC | 9 cut(s) | 906, 922, 1110, 1731, 1747, 1935, 2556, 2572, 2760 |
| ScaI | AGTACT | 1 cut(s) | 2832 |
| SchI | GAGTC | 3 cut(s) | 1067, 1892, 2717 |
| SfuI | TTCGAA | 7 cut(s) | 396, 658, 1221, 1483, 2046, 2308, 2839 |
| SinI | GGWCC | 6 cut(s) | 906, 1110, 1731, 1935, 2556, 2760 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 420, 1245, 2070 |
| SmlI | CTYRAG | 4 cut(s) | 680, 1505, 2330, 2848 |
| SmoI | CTYRAG | 4 cut(s) | 680, 1505, 2330, 2848 |
| SsiI | CCGC | 3 cut(s) | 436, 1261, 2086 |
| SspI | AATATT | 9 cut(s) | 374, 766, 851, 1199, 1591, 1676, 2024, 2416, 2501 |
| SspMI | CTAG | 9 cut(s) | 473, 555, 1028, 1298, 1380, 1853, 2123, 2205, 2678 |
| StyI | CCWWGG | 4 cut(s) | 918, 1743, 2568, 2886 |
| TaaI | ACNGT | 4 cut(s) | 292, 654, 1479, 2304 |
| TaiI | ACGT | 5 cut(s) | 351, 608, 1433, 2258, 2906 |
| TaqII | GACCGA | 6 cut(s) | 923, 1082, 1748, 1907, 2573, 2732 |
| TatI | WGTACW | 7 cut(s) | 676, 781, 1501, 1606, 2326, 2431, 2830 |
| Tru1I | TTAA | 6 cut(s) | 56, 354, 762, 1587, 2412, 2849 |
| Tru9I | TTAA | 6 cut(s) | 56, 354, 762, 1587, 2412, 2849 |
| TseFI | GTSAC | 6 cut(s) | 731, 1088, 1556, 1913, 2381, 2738 |
| TseI | GCWGC | 4 cut(s) | 334, 485, 1310, 2135 |
| Tsp45I | GTSAC | 6 cut(s) | 731, 1088, 1556, 1913, 2381, 2738 |
| Van91I | CCANNNNNTGG | 6 cut(s) | 458, 810, 1283, 1635, 2108, 2460 |
| Vha464I | CTTAAG | 1 cut(s) | 2848 |
| VpaK11BI | GGWCC | 6 cut(s) | 906, 1110, 1731, 1935, 2556, 2760 |
| XapI | RAATTY | 7 cut(s) | 175, 688, 1164, 1513, 1989, 2338, 2814 |
| XmnI | GAANNNNTTC | 3 cut(s) | 527, 1352, 2177 |
| XspI | CTAG | 9 cut(s) | 473, 555, 1028, 1298, 1380, 1853, 2123, 2205, 2678 |
| ZrmI | AGTACT | 1 cut(s) | 2832 |
| Zsp2I | ATGCAT | 1 cut(s) | 67 |