PHD and RING finger domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 184 |
| AciI | CCGC | 1 cut(s) | 659 |
| AclWI | GGATC | 1 cut(s) | 614 |
| AcsI | RAATTY | 2 cut(s) | 146, 264 |
| AcuI | CTGAAG | 1 cut(s) | 69 |
| AfaI | GTAC | 1 cut(s) | 409 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 230, 371, 588 |
| AgsI | TTSAA | 4 cut(s) | 104, 269, 341, 622 |
| AjnI | CCWGG | 2 cut(s) | 186, 223 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 28, 60 |
| AluBI | AGCT | 1 cut(s) | 172 |
| AluI | AGCT | 1 cut(s) | 172 |
| Alw26I | GTCTC | 1 cut(s) | 157 |
| AlwI | GGATC | 1 cut(s) | 614 |
| ApoI | RAATTY | 2 cut(s) | 146, 264 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 430, 462 |
| AspS9I | GGNCC | 2 cut(s) | 221, 391 |
| AsuHPI | GGTGA | 1 cut(s) | 472 |
| AsuII | TTCGAA | 1 cut(s) | 360 |
| AvaII | GGWCC | 2 cut(s) | 221, 391 |
| BbsI | GAAGAC | 3 cut(s) | 460, 469, 543 |
| BccI | CCATC | 3 cut(s) | 254, 592, 597 |
| BceAI | ACGGC | 1 cut(s) | 313 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 130, 164 |
| BciT130I | CCWGG | 2 cut(s) | 188, 225 |
| BcoDI | GTCTC | 1 cut(s) | 157 |
| BfaI | CTAG | 1 cut(s) | 167 |
| BfuAI | ACCTGC | 1 cut(s) | 184 |
| Bme1390I | CCNGG | 2 cut(s) | 188, 225 |
| Bme18I | GGWCC | 2 cut(s) | 221, 391 |
| BmgT120I | GGNCC | 2 cut(s) | 221, 391 |
| BmiI | GGNNCC | 3 cut(s) | 222, 293, 392 |
| BmrFI | CCNGG | 2 cut(s) | 188, 225 |
| BmrI | ACTGGG | 1 cut(s) | 290 |
| BmsI | GCATC | 2 cut(s) | 408, 533 |
| BmuI | ACTGGG | 1 cut(s) | 290 |
| BpiI | GAAGAC | 3 cut(s) | 460, 469, 543 |
| Bpu14I | TTCGAA | 1 cut(s) | 360 |
| BsaJI | CCNNGG | 2 cut(s) | 394, 582 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 230, 371, 588 |
| Bse1I | ACTGG | 1 cut(s) | 296 |
| Bse3DI | GCAATG | 1 cut(s) | 131 |
| BseBI | CCWGG | 2 cut(s) | 188, 225 |
| BseDI | CCNNGG | 2 cut(s) | 394, 582 |
| BseGI | GGATG | 3 cut(s) | 196, 603, 608 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 230, 371, 588 |
| BseMI | GCAATG | 1 cut(s) | 131 |
| BseNI | ACTGG | 1 cut(s) | 296 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BslFI | GGGAC | 2 cut(s) | 234, 404 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 230, 371, 588 |
| BsmAI | GTCTC | 1 cut(s) | 157 |
| BsmFI | GGGAC | 2 cut(s) | 234, 404 |
| Bsp119I | TTCGAA | 1 cut(s) | 360 |
| Bsp143I | GATC | 3 cut(s) | 52, 606, 690 |
| Bsp19I | CCATGG | 1 cut(s) | 394 |
| BspACI | CCGC | 1 cut(s) | 659 |
| BspLI | GGNNCC | 3 cut(s) | 222, 293, 392 |
| BspMI | ACCTGC | 1 cut(s) | 184 |
| BspPI | GGATC | 1 cut(s) | 614 |
| BspT104I | TTCGAA | 1 cut(s) | 360 |
| BsrDI | GCAATG | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 296 |
| BssECI | CCNNGG | 2 cut(s) | 394, 582 |
| BssMI | GATC | 3 cut(s) | 52, 606, 690 |
| BssT1I | CCWWGG | 2 cut(s) | 394, 582 |
| Bst2UI | CCWGG | 2 cut(s) | 188, 225 |
| Bst4CI | ACNGT | 4 cut(s) | 92, 518, 549, 654 |
| Bst6I | CTCTTC | 1 cut(s) | 336 |
| BstBI | TTCGAA | 1 cut(s) | 360 |
| BstDSI | CCRYGG | 1 cut(s) | 394 |
| BstF5I | GGATG | 3 cut(s) | 196, 603, 608 |
| BstKTI | GATC | 3 cut(s) | 55, 609, 693 |
| BstMAI | GTCTC | 1 cut(s) | 157 |
| BstMBI | GATC | 3 cut(s) | 52, 606, 690 |
| BstNI | CCWGG | 2 cut(s) | 188, 225 |
| BstSCI | CCNGG | 2 cut(s) | 186, 223 |
| BstV2I | GAAGAC | 3 cut(s) | 460, 469, 543 |
| BtgI | CCRYGG | 1 cut(s) | 394 |
| BtsCI | GGATG | 3 cut(s) | 196, 603, 608 |
| BveI | ACCTGC | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 2 cut(s) | 221, 391 |
| CsiI | ACCWGGT | 1 cut(s) | 223 |
| Csp6I | GTAC | 1 cut(s) | 408 |
| CviAII | CATG | 4 cut(s) | 395, 498, 588, 629 |
| CviJI | RGCY | 2 cut(s) | 172, 328 |
| CviKI_1 | RGCY | 2 cut(s) | 172, 328 |
| CviQI | GTAC | 1 cut(s) | 408 |
| DpnI | GATC | 3 cut(s) | 54, 608, 692 |
| DpnII | GATC | 3 cut(s) | 52, 606, 690 |
| Eam1104I | CTCTTC | 1 cut(s) | 336 |
| EarI | CTCTTC | 1 cut(s) | 336 |
| Eco130I | CCWWGG | 2 cut(s) | 394, 582 |
| Eco47I | GGWCC | 2 cut(s) | 221, 391 |
| Eco57I | CTGAAG | 1 cut(s) | 69 |
| EcoO109I | RGGNCCY | 1 cut(s) | 221 |
| EcoRI | GAATTC | 1 cut(s) | 264 |
| EcoRII | CCWGG | 2 cut(s) | 186, 223 |
| EcoT14I | CCWWGG | 2 cut(s) | 394, 582 |
| ErhI | CCWWGG | 2 cut(s) | 394, 582 |
| FaeI | CATG | 4 cut(s) | 398, 501, 591, 632 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 441, 473 |
| FaqI | GGGAC | 2 cut(s) | 234, 404 |
| FatI | CATG | 4 cut(s) | 394, 497, 587, 628 |
| FokI | GGATG | 3 cut(s) | 203, 610, 615 |
| FspBI | CTAG | 1 cut(s) | 167 |
| Hin1II | CATG | 4 cut(s) | 398, 501, 591, 632 |
| HinfI | GANTC | 2 cut(s) | 194, 381 |
| HphI | GGTGA | 1 cut(s) | 472 |
| Hpy166II | GTNNAC | 1 cut(s) | 110 |
| Hpy188I | TCNGA | 3 cut(s) | 49, 96, 564 |
| Hpy188III | TCNNGA | 3 cut(s) | 162, 389, 435 |
| Hpy8I | GTNNAC | 1 cut(s) | 110 |
| Hpy99I | CGWCG | 1 cut(s) | 287 |
| HpyAV | CCTTC | 2 cut(s) | 78, 254 |
| HpyCH4III | ACNGT | 4 cut(s) | 92, 518, 549, 654 |
| HpyCH4V | TGCA | 3 cut(s) | 179, 491, 628 |
| Hsp92II | CATG | 4 cut(s) | 398, 501, 591, 632 |
| Kzo9I | GATC | 3 cut(s) | 52, 606, 690 |
| LpnPI | CCDG | 7 cut(s) | 173, 189, 200, 210, 237, 309, 513 |
| LweI | GCATC | 2 cut(s) | 408, 533 |
| MabI | ACCWGGT | 1 cut(s) | 223 |
| MaeI | CTAG | 1 cut(s) | 167 |
| MaeIII | GTNAC | 5 cut(s) | 81, 298, 466, 518, 654 |
| MalI | GATC | 3 cut(s) | 54, 608, 692 |
| MboI | GATC | 3 cut(s) | 52, 606, 690 |
| MboII | GAAGA | 8 cut(s) | 62, 107, 217, 242, 353, 465, 469, 543 |
| MluCI | AATT | 3 cut(s) | 62, 146, 264 |
| MlyI | GAGTC | 1 cut(s) | 203 |
| MnlI | CCTC | 3 cut(s) | 337, 420, 628 |
| MseI | TTAA | 2 cut(s) | 278, 510 |
| MspR9I | CCNGG | 2 cut(s) | 188, 225 |
| MvaI | CCWGG | 2 cut(s) | 188, 225 |
| NcoI | CCATGG | 1 cut(s) | 394 |
| NdeII | GATC | 3 cut(s) | 52, 606, 690 |
| NlaIII | CATG | 4 cut(s) | 398, 501, 591, 632 |
| NlaIV | GGNNCC | 3 cut(s) | 222, 293, 392 |
| NspV | TTCGAA | 1 cut(s) | 360 |
| PfeI | GAWTC | 1 cut(s) | 381 |
| PfoI | TCCNGGA | 1 cut(s) | 186 |
| PleI | GAGTC | 1 cut(s) | 202 |
| PpsI | GAGTC | 1 cut(s) | 202 |
| PpuMI | RGGWCCY | 1 cut(s) | 221 |
| Psp5II | RGGWCCY | 1 cut(s) | 221 |
| Psp6I | CCWGG | 2 cut(s) | 186, 223 |
| PspGI | CCWGG | 2 cut(s) | 186, 223 |
| PspN4I | GGNNCC | 3 cut(s) | 222, 293, 392 |
| PspPI | GGNCC | 2 cut(s) | 221, 391 |
| PspPPI | RGGWCCY | 1 cut(s) | 221 |
| RsaI | GTAC | 1 cut(s) | 409 |
| RsaNI | GTAC | 1 cut(s) | 408 |
| SaqAI | TTAA | 2 cut(s) | 278, 510 |
| Sau3AI | GATC | 3 cut(s) | 52, 606, 690 |
| Sau96I | GGNCC | 2 cut(s) | 221, 391 |
| SchI | GAGTC | 1 cut(s) | 203 |
| ScrFI | CCNGG | 2 cut(s) | 188, 225 |
| SetI | ASST | 8 cut(s) | 70, 174, 178, 226, 376, 448, 532, 639 |
| SexAI | ACCWGGT | 1 cut(s) | 223 |
| SfaNI | GCATC | 2 cut(s) | 408, 533 |
| SfuI | TTCGAA | 1 cut(s) | 360 |
| SinI | GGWCC | 2 cut(s) | 221, 391 |
| Sse9I | AATT | 3 cut(s) | 62, 146, 264 |
| SsiI | CCGC | 1 cut(s) | 659 |
| SspMI | CTAG | 1 cut(s) | 167 |
| StyD4I | CCNGG | 2 cut(s) | 186, 223 |
| StyI | CCWWGG | 2 cut(s) | 394, 582 |
| TaaI | ACNGT | 4 cut(s) | 92, 518, 549, 654 |
| TaqI | TCGA | 4 cut(s) | 150, 161, 360, 689 |
| TasI | AATT | 3 cut(s) | 62, 146, 264 |
| TfiI | GAWTC | 1 cut(s) | 381 |
| Tru1I | TTAA | 2 cut(s) | 278, 510 |
| Tru9I | TTAA | 2 cut(s) | 278, 510 |
| TspDTI | ATGAA | 5 cut(s) | 107, 236, 373, 582, 632 |
| TspGWI | ACGGA | 1 cut(s) | 287 |
| VpaK11BI | GGWCC | 2 cut(s) | 221, 391 |
| XapI | RAATTY | 2 cut(s) | 146, 264 |
| XspI | CTAG | 1 cut(s) | 167 |