PHD and RING finger domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 184 |
| AccI | GTMKAC | 1 cut(s) | 150 |
| AclWI | GGATC | 1 cut(s) | 229 |
| AcoI | YGGCCR | 1 cut(s) | 78 |
| AcsI | RAATTY | 1 cut(s) | 264 |
| AfaI | GTAC | 2 cut(s) | 66, 578 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 371 |
| AgsI | TTSAA | 4 cut(s) | 104, 269, 341, 565 |
| AhlI | ACTAGT | 1 cut(s) | 22 |
| AjnI | CCWGG | 1 cut(s) | 186 |
| Alw26I | GTCTC | 1 cut(s) | 157 |
| AlwI | GGATC | 1 cut(s) | 229 |
| AoxI | GGCC | 1 cut(s) | 78 |
| ApoI | RAATTY | 1 cut(s) | 264 |
| AspS9I | GGNCC | 1 cut(s) | 391 |
| AsuHPI | GGTGA | 2 cut(s) | 436, 472 |
| AvaII | GGWCC | 1 cut(s) | 391 |
| BbsI | GAAGAC | 3 cut(s) | 460, 469, 543 |
| BccI | CCATC | 3 cut(s) | 76, 254, 532 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 130, 164 |
| BciT130I | CCWGG | 1 cut(s) | 188 |
| BcoDI | GTCTC | 1 cut(s) | 157 |
| BcuI | ACTAGT | 1 cut(s) | 22 |
| BfaI | CTAG | 2 cut(s) | 23, 167 |
| BfuAI | ACCTGC | 1 cut(s) | 184 |
| BglII | AGATCT | 1 cut(s) | 91 |
| Bme1390I | CCNGG | 1 cut(s) | 188 |
| Bme18I | GGWCC | 1 cut(s) | 391 |
| BmgT120I | GGNCC | 1 cut(s) | 391 |
| BmiI | GGNNCC | 2 cut(s) | 293, 392 |
| BmrFI | CCNGG | 1 cut(s) | 188 |
| BmrI | ACTGGG | 1 cut(s) | 290 |
| BmsI | GCATC | 1 cut(s) | 408 |
| BmuI | ACTGGG | 1 cut(s) | 290 |
| BpiI | GAAGAC | 3 cut(s) | 460, 469, 543 |
| BsaJI | CCNNGG | 2 cut(s) | 394, 582 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 430, 460 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 371 |
| Bse1I | ACTGG | 1 cut(s) | 296 |
| Bse3DI | GCAATG | 1 cut(s) | 131 |
| BseBI | CCWGG | 1 cut(s) | 188 |
| BseDI | CCNNGG | 2 cut(s) | 394, 582 |
| BseGI | GGATG | 1 cut(s) | 196 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 371 |
| BseMI | GCAATG | 1 cut(s) | 131 |
| BseNI | ACTGG | 1 cut(s) | 296 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BshFI | GGCC | 1 cut(s) | 80 |
| BslFI | GGGAC | 1 cut(s) | 404 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 371 |
| BsmAI | GTCTC | 1 cut(s) | 157 |
| BsmFI | GGGAC | 1 cut(s) | 404 |
| BsnI | GGCC | 1 cut(s) | 80 |
| Bsp143I | GATC | 3 cut(s) | 91, 221, 357 |
| Bsp19I | CCATGG | 1 cut(s) | 394 |
| BspANI | GGCC | 1 cut(s) | 80 |
| BspLI | GGNNCC | 2 cut(s) | 293, 392 |
| BspMI | ACCTGC | 1 cut(s) | 184 |
| BspPI | GGATC | 1 cut(s) | 229 |
| BsrDI | GCAATG | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 296 |
| BssECI | CCNNGG | 2 cut(s) | 394, 582 |
| BssMI | GATC | 3 cut(s) | 91, 221, 357 |
| BssT1I | CCWWGG | 2 cut(s) | 394, 582 |
| Bst2UI | CCWGG | 1 cut(s) | 188 |
| Bst4CI | ACNGT | 2 cut(s) | 446, 549 |
| Bst6I | CTCTTC | 1 cut(s) | 336 |
| BstC8I | GCNNGC | 1 cut(s) | 326 |
| BstDSI | CCRYGG | 1 cut(s) | 394 |
| BstF5I | GGATG | 1 cut(s) | 196 |
| BstKTI | GATC | 3 cut(s) | 94, 224, 360 |
| BstMAI | GTCTC | 1 cut(s) | 157 |
| BstMBI | GATC | 3 cut(s) | 91, 221, 357 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 405 |
| BstNI | CCWGG | 1 cut(s) | 188 |
| BstSCI | CCNGG | 1 cut(s) | 186 |
| BstV2I | GAAGAC | 3 cut(s) | 460, 469, 543 |
| BstX2I | RGATCY | 2 cut(s) | 91, 221 |
| BstYI | RGATCY | 2 cut(s) | 91, 221 |
| BsuRI | GGCC | 1 cut(s) | 80 |
| BtgI | CCRYGG | 1 cut(s) | 394 |
| BtsCI | GGATG | 1 cut(s) | 196 |
| BtsIMutI | CAGTG | 1 cut(s) | 408 |
| BveI | ACCTGC | 1 cut(s) | 184 |
| Cac8I | GCNNGC | 1 cut(s) | 326 |
| Cfr13I | GGNCC | 1 cut(s) | 391 |
| CseI | GACGC | 1 cut(s) | 161 |
| Csp6I | GTAC | 2 cut(s) | 65, 577 |
| CviAII | CATG | 2 cut(s) | 395, 498 |
| CviJI | RGCY | 2 cut(s) | 80, 328 |
| CviKI_1 | RGCY | 2 cut(s) | 80, 328 |
| CviQI | GTAC | 2 cut(s) | 65, 577 |
| DpnI | GATC | 3 cut(s) | 93, 223, 359 |
| DpnII | GATC | 3 cut(s) | 91, 221, 357 |
| EaeI | YGGCCR | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 1 cut(s) | 336 |
| EarI | CTCTTC | 1 cut(s) | 336 |
| Eco130I | CCWWGG | 2 cut(s) | 394, 582 |
| Eco47I | GGWCC | 1 cut(s) | 391 |
| EcoRI | GAATTC | 1 cut(s) | 264 |
| EcoRII | CCWGG | 1 cut(s) | 186 |
| EcoT14I | CCWWGG | 2 cut(s) | 394, 582 |
| ErhI | CCWWGG | 2 cut(s) | 394, 582 |
| FaeI | CATG | 2 cut(s) | 398, 501 |
| FaiI | YATR | 8 cut(s) | 211, 213, 289, 312, 396, 465, 499, 589 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 441, 473 |
| FaqI | GGGAC | 1 cut(s) | 404 |
| FatI | CATG | 2 cut(s) | 394, 497 |
| FblI | GTMKAC | 1 cut(s) | 150 |
| FokI | GGATG | 1 cut(s) | 203 |
| FspBI | CTAG | 2 cut(s) | 23, 167 |
| HaeIII | GGCC | 1 cut(s) | 80 |
| HgaI | GACGC | 1 cut(s) | 161 |
| Hin1II | CATG | 2 cut(s) | 398, 501 |
| HincII | GTYRAC | 1 cut(s) | 151 |
| HindII | GTYRAC | 1 cut(s) | 151 |
| HinfI | GANTC | 5 cut(s) | 6, 38, 85, 194, 381 |
| HphI | GGTGA | 2 cut(s) | 436, 472 |
| Hpy166II | GTNNAC | 2 cut(s) | 110, 151 |
| Hpy188I | TCNGA | 1 cut(s) | 11 |
| Hpy188III | TCNNGA | 3 cut(s) | 89, 162, 389 |
| Hpy8I | GTNNAC | 2 cut(s) | 110, 151 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyAV | CCTTC | 1 cut(s) | 254 |
| HpyCH4III | ACNGT | 2 cut(s) | 446, 549 |
| HpyCH4V | TGCA | 2 cut(s) | 179, 491 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 405 |
| Hsp92II | CATG | 2 cut(s) | 398, 501 |
| Kzo9I | GATC | 3 cut(s) | 91, 221, 357 |
| LmnI | GCTCC | 1 cut(s) | 438 |
| LpnPI | CCDG | 7 cut(s) | 61, 173, 189, 200, 210, 309, 513 |
| LweI | GCATC | 1 cut(s) | 408 |
| MaeI | CTAG | 2 cut(s) | 23, 167 |
| MaeIII | GTNAC | 3 cut(s) | 171, 298, 466 |
| MalI | GATC | 3 cut(s) | 93, 223, 359 |
| MboI | GATC | 3 cut(s) | 91, 221, 357 |
| MboII | GAAGA | 7 cut(s) | 107, 217, 242, 353, 465, 469, 543 |
| MflI | RGATCY | 2 cut(s) | 91, 221 |
| MluCI | AATT | 1 cut(s) | 264 |
| MnlI | CCTC | 2 cut(s) | 337, 420 |
| MseI | TTAA | 2 cut(s) | 278, 510 |
| MspR9I | CCNGG | 1 cut(s) | 188 |
| MvaI | CCWGG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 405 |
| NcoI | CCATGG | 1 cut(s) | 394 |
| NdeII | GATC | 3 cut(s) | 91, 221, 357 |
| NlaIII | CATG | 2 cut(s) | 398, 501 |
| NlaIV | GGNNCC | 2 cut(s) | 293, 392 |
| NmeAIII | GCCGAG | 1 cut(s) | 106 |
| PfeI | GAWTC | 5 cut(s) | 6, 38, 85, 194, 381 |
| PfoI | TCCNGGA | 1 cut(s) | 186 |
| Psp6I | CCWGG | 1 cut(s) | 186 |
| PspGI | CCWGG | 1 cut(s) | 186 |
| PspN4I | GGNNCC | 2 cut(s) | 293, 392 |
| PspPI | GGNCC | 1 cut(s) | 391 |
| PsuI | RGATCY | 2 cut(s) | 91, 221 |
| RsaI | GTAC | 2 cut(s) | 66, 578 |
| RsaNI | GTAC | 2 cut(s) | 65, 577 |
| SalI | GTCGAC | 1 cut(s) | 149 |
| SaqAI | TTAA | 2 cut(s) | 278, 510 |
| Sau3AI | GATC | 3 cut(s) | 91, 221, 357 |
| Sau96I | GGNCC | 1 cut(s) | 391 |
| ScrFI | CCNGG | 1 cut(s) | 188 |
| SetI | ASST | 3 cut(s) | 178, 376, 532 |
| SfaNI | GCATC | 1 cut(s) | 408 |
| SinI | GGWCC | 1 cut(s) | 391 |
| SpeI | ACTAGT | 1 cut(s) | 22 |
| Sse9I | AATT | 1 cut(s) | 264 |
| SspMI | CTAG | 2 cut(s) | 23, 167 |
| StyD4I | CCNGG | 1 cut(s) | 186 |
| StyI | CCWWGG | 2 cut(s) | 394, 582 |
| TaaI | ACNGT | 2 cut(s) | 446, 549 |
| TaqI | TCGA | 3 cut(s) | 150, 161, 360 |
| TasI | AATT | 1 cut(s) | 264 |
| TatI | WGTACW | 1 cut(s) | 576 |
| TfiI | GAWTC | 5 cut(s) | 6, 38, 85, 194, 381 |
| Tru1I | TTAA | 2 cut(s) | 278, 510 |
| Tru9I | TTAA | 2 cut(s) | 278, 510 |
| TscAI | CASTG | 1 cut(s) | 415 |
| TspDTI | ATGAA | 3 cut(s) | 107, 236, 373 |
| TspGWI | ACGGA | 2 cut(s) | 287, 451 |
| TspRI | CASTG | 1 cut(s) | 415 |
| VpaK11BI | GGWCC | 1 cut(s) | 391 |
| XapI | RAATTY | 1 cut(s) | 264 |
| XmiI | GTMKAC | 1 cut(s) | 150 |
| XspI | CTAG | 2 cut(s) | 23, 167 |