U-box domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 478 |
| AccB1I | GGYRCC | 1 cut(s) | 478 |
| AccI | GTMKAC | 2 cut(s) | 668, 1524 |
| AccII | CGCG | 1 cut(s) | 571 |
| AciI | CCGC | 2 cut(s) | 41, 65 |
| AclWI | GGATC | 2 cut(s) | 1823, 2085 |
| AcoI | YGGCCR | 3 cut(s) | 69, 1916, 2125 |
| AcsI | RAATTY | 2 cut(s) | 1172, 1313 |
| AcyI | GRCGYC | 1 cut(s) | 2016 |
| AfeI | AGCGCT | 1 cut(s) | 2121 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1511, 1925, 2081, 2183 |
| AflIII | ACRYGT | 1 cut(s) | 975 |
| AgeI | ACCGGT | 1 cut(s) | 2109 |
| AgsI | TTSAA | 8 cut(s) | 260, 612, 732, 1284, 1289, 1298, 1438, 1451 |
| AjiI | CACGTC | 1 cut(s) | 1978 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 857, 889 |
| AleI | CACNNNNGTG | 1 cut(s) | 467 |
| Alw21I | GWGCWC | 2 cut(s) | 203, 960 |
| Alw26I | GTCTC | 2 cut(s) | 1054, 1331 |
| AlwI | GGATC | 2 cut(s) | 1823, 2085 |
| Ama87I | CYCGRG | 1 cut(s) | 1505 |
| Aor51HI | AGCGCT | 1 cut(s) | 2121 |
| AoxI | GGCC | 6 cut(s) | 69, 136, 1916, 2003, 2125, 2185 |
| ApoI | RAATTY | 2 cut(s) | 1172, 1313 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 842, 874 |
| AsiGI | ACCGGT | 1 cut(s) | 2109 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 727 |
| Asp718I | GGTACC | 1 cut(s) | 478 |
| AspLEI | GCGC | 2 cut(s) | 413, 2122 |
| AspS9I | GGNCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| AsuC2I | CCSGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| AsuHPI | GGTGA | 4 cut(s) | 481, 699, 897, 1379 |
| AsuNHI | GCTAGC | 2 cut(s) | 593, 2035 |
| AvaI | CYCGRG | 1 cut(s) | 1505 |
| AvaII | GGWCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 336, 369 |
| BalI | TGGCCA | 2 cut(s) | 71, 2127 |
| BanI | GGYRCC | 1 cut(s) | 478 |
| BanII | GRGCYC | 2 cut(s) | 203, 960 |
| BbsI | GAAGAC | 1 cut(s) | 1233 |
| Bbv12I | GWGCWC | 2 cut(s) | 203, 960 |
| BccI | CCATC | 4 cut(s) | 80, 424, 914, 1771 |
| BceAI | ACGGC | 1 cut(s) | 1528 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1073, 1107 |
| BciVI | GTATCC | 1 cut(s) | 337 |
| BcnI | CCSGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| BcoDI | GTCTC | 2 cut(s) | 1054, 1331 |
| BfaI | CTAG | 8 cut(s) | 594, 645, 953, 1064, 1373, 1749, 2036, 2199 |
| BfmI | CTRYAG | 2 cut(s) | 447, 1104 |
| BfoI | RGCGCY | 1 cut(s) | 2123 |
| BfuI | GTATCC | 1 cut(s) | 337 |
| BglII | AGATCT | 1 cut(s) | 519 |
| BlpI | GCTNAGC | 1 cut(s) | 2031 |
| BmcAI | AGTACT | 1 cut(s) | 1790 |
| Bme1390I | CCNGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| Bme18I | GGWCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| BmeT110I | CYCGRG | 1 cut(s) | 1505 |
| BmgBI | CACGTC | 1 cut(s) | 1978 |
| BmgT120I | GGNCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| BmiI | GGNNCC | 4 cut(s) | 480, 838, 1607, 1966 |
| BmrFI | CCNGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| BmsI | GCATC | 1 cut(s) | 1402 |
| BmtI | GCTAGC | 2 cut(s) | 597, 2039 |
| BpiI | GAAGAC | 1 cut(s) | 1233 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1601, 2100 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2031 |
| BpuEI | CTTGAG | 6 cut(s) | 249, 700, 944, 1313, 2041, 2221 |
| BpuMI | CCSGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| Bsa29I | ATCGAT | 1 cut(s) | 1827 |
| BsaHI | GRCGYC | 1 cut(s) | 2016 |
| BsaJI | CCNNGG | 3 cut(s) | 465, 1581, 1592 |
| BsaWI | WCCGGW | 4 cut(s) | 481, 1847, 2074, 2109 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1511, 1925, 2081, 2183 |
| Bse118I | RCCGGY | 1 cut(s) | 2109 |
| Bse1I | ACTGG | 1 cut(s) | 2006 |
| Bse3DI | GCAATG | 3 cut(s) | 149, 604, 1101 |
| BseCI | ATCGAT | 1 cut(s) | 1827 |
| BseDI | CCNNGG | 3 cut(s) | 465, 1581, 1592 |
| BseGI | GGATG | 4 cut(s) | 235, 925, 1471, 2218 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1511, 1925, 2081, 2183 |
| BseMI | GCAATG | 3 cut(s) | 149, 604, 1101 |
| BseMII | CTCAG | 7 cut(s) | 142, 207, 1332, 1799, 2091, 2289, 2298 |
| BseNI | ACTGG | 1 cut(s) | 2006 |
| BseRI | GAGGAG | 3 cut(s) | 61, 663, 955 |
| BseYI | CCCAGC | 1 cut(s) | 681 |
| BsgI | GTGCAG | 1 cut(s) | 1218 |
| Bsh1236I | CGCG | 1 cut(s) | 571 |
| BshFI | GGCC | 6 cut(s) | 71, 138, 1918, 2005, 2127, 2187 |
| BshNI | GGYRCC | 1 cut(s) | 478 |
| BshTI | ACCGGT | 1 cut(s) | 2109 |
| BshVI | ATCGAT | 1 cut(s) | 1827 |
| BsiHKAI | GWGCWC | 2 cut(s) | 203, 960 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1505 |
| BsiSI | CCGG | 8 cut(s) | 195, 482, 1567, 1583, 1692, 1848, 2075, 2110 |
| BslFI | GGGAC | 4 cut(s) | 986, 1488, 1742, 1978 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1511, 1925, 2081, 2183 |
| BsmAI | GTCTC | 2 cut(s) | 1054, 1331 |
| BsmFI | GGGAC | 4 cut(s) | 986, 1488, 1742, 1978 |
| BsmI | GAATGC | 2 cut(s) | 1857, 2146 |
| BsnI | GGCC | 6 cut(s) | 71, 138, 1918, 2005, 2127, 2187 |
| BsoBI | CYCGRG | 1 cut(s) | 1505 |
| Bsp1286I | GDGCHC | 2 cut(s) | 203, 960 |
| Bsp1407I | TGTACA | 3 cut(s) | 243, 978, 1672 |
| Bsp143I | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2031 |
| BspACI | CCGC | 2 cut(s) | 41, 65 |
| BspANI | GGCC | 6 cut(s) | 71, 138, 1918, 2005, 2127, 2187 |
| BspCNI | CTCAG | 7 cut(s) | 141, 208, 1331, 1798, 2092, 2290, 2297 |
| BspDI | ATCGAT | 1 cut(s) | 1827 |
| BspFNI | CGCG | 1 cut(s) | 571 |
| BspHI | TCATGA | 1 cut(s) | 441 |
| BspLI | GGNNCC | 4 cut(s) | 480, 838, 1607, 1966 |
| BspMAI | CTGCAG | 1 cut(s) | 1108 |
| BspOI | GCTAGC | 2 cut(s) | 597, 2039 |
| BspPI | GGATC | 2 cut(s) | 1823, 2085 |
| BspT107I | GGYRCC | 1 cut(s) | 478 |
| BsrDI | GCAATG | 3 cut(s) | 149, 604, 1101 |
| BsrFI | RCCGGY | 1 cut(s) | 2109 |
| BsrGI | TGTACA | 3 cut(s) | 243, 978, 1672 |
| BsrI | ACTGG | 1 cut(s) | 2006 |
| BssAI | RCCGGY | 1 cut(s) | 2109 |
| BssECI | CCNNGG | 3 cut(s) | 465, 1581, 1592 |
| BssMI | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| BssNAI | GTATAC | 1 cut(s) | 669 |
| BssNI | GRCGYC | 1 cut(s) | 2016 |
| BssT1I | CCWWGG | 1 cut(s) | 1592 |
| Bst1107I | GTATAC | 1 cut(s) | 669 |
| Bst4CI | ACNGT | 6 cut(s) | 466, 496, 585, 631, 666, 1434 |
| Bst6I | CTCTTC | 4 cut(s) | 48, 1062, 1187, 1284 |
| BstACI | GRCGYC | 1 cut(s) | 2016 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1625 |
| BstAUI | TGTACA | 3 cut(s) | 243, 978, 1672 |
| BstC8I | GCNNGC | 4 cut(s) | 595, 991, 1658, 2037 |
| BstDSI | CCRYGG | 1 cut(s) | 465 |
| BstEII | GGTNACC | 1 cut(s) | 903 |
| BstF5I | GGATG | 4 cut(s) | 235, 925, 1471, 2218 |
| BstFNI | CGCG | 1 cut(s) | 571 |
| BstH2I | RGCGCY | 1 cut(s) | 2123 |
| BstHHI | GCGC | 2 cut(s) | 413, 2122 |
| BstKTI | GATC | 5 cut(s) | 522, 536, 1558, 1831, 2080 |
| BstMAI | GTCTC | 2 cut(s) | 1054, 1331 |
| BstMBI | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| BstNSI | RCATGY | 2 cut(s) | 979, 1503 |
| BstPI | GGTNACC | 1 cut(s) | 903 |
| BstSCI | CCNGG | 4 cut(s) | 194, 1565, 1581, 1690 |
| BstSFI | CTRYAG | 2 cut(s) | 447, 1104 |
| BstUI | CGCG | 1 cut(s) | 571 |
| BstV2I | GAAGAC | 1 cut(s) | 1233 |
| BstX2I | RGATCY | 2 cut(s) | 519, 2077 |
| BstYI | RGATCY | 2 cut(s) | 519, 2077 |
| BstZ17I | GTATAC | 1 cut(s) | 669 |
| Bsu15I | ATCGAT | 1 cut(s) | 1827 |
| BsuI | GTATCC | 1 cut(s) | 337 |
| BsuRI | GGCC | 6 cut(s) | 71, 138, 1918, 2005, 2127, 2187 |
| BsuTUI | ATCGAT | 1 cut(s) | 1827 |
| BtgI | CCRYGG | 1 cut(s) | 465 |
| BtrI | CACGTC | 1 cut(s) | 1978 |
| BtsCI | GGATG | 4 cut(s) | 235, 925, 1471, 2218 |
| BtsI | GCAGTG | 1 cut(s) | 2167 |
| BtsIMutI | CAGTG | 4 cut(s) | 492, 801, 1181, 2167 |
| Cac8I | GCNNGC | 4 cut(s) | 595, 991, 1658, 2037 |
| CciI | TCATGA | 1 cut(s) | 441 |
| CfoI | GCGC | 2 cut(s) | 413, 2122 |
| Cfr10I | RCCGGY | 1 cut(s) | 2109 |
| Cfr13I | GGNCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| ClaI | ATCGAT | 1 cut(s) | 1827 |
| CseI | GACGC | 1 cut(s) | 2024 |
| CspAI | ACCGGT | 1 cut(s) | 2109 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 447, 482 |
| DpnI | GATC | 5 cut(s) | 521, 535, 1557, 1830, 2079 |
| DpnII | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| DraI | TTTAAA | 1 cut(s) | 2043 |
| EaeI | YGGCCR | 3 cut(s) | 69, 1916, 2125 |
| Eam1104I | CTCTTC | 4 cut(s) | 48, 1062, 1187, 1284 |
| EarI | CTCTTC | 4 cut(s) | 48, 1062, 1187, 1284 |
| Ecl136II | GAGCTC | 2 cut(s) | 201, 958 |
| Eco130I | CCWWGG | 1 cut(s) | 1592 |
| Eco24I | GRGCYC | 2 cut(s) | 203, 960 |
| Eco32I | GATATC | 1 cut(s) | 1873 |
| Eco47I | GGWCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| Eco47III | AGCGCT | 1 cut(s) | 2121 |
| Eco53kI | GAGCTC | 2 cut(s) | 201, 958 |
| Eco88I | CYCGRG | 1 cut(s) | 1505 |
| Eco91I | GGTNACC | 1 cut(s) | 903 |
| EcoICRI | GAGCTC | 2 cut(s) | 201, 958 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1965 |
| EcoO65I | GGTNACC | 1 cut(s) | 903 |
| EcoRI | GAATTC | 2 cut(s) | 1172, 1313 |
| EcoRV | GATATC | 1 cut(s) | 1873 |
| EcoT14I | CCWWGG | 1 cut(s) | 1592 |
| EcoT38I | GRGCYC | 2 cut(s) | 203, 960 |
| ErhI | CCWWGG | 1 cut(s) | 1592 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2003, 2035 |
| FaqI | GGGAC | 4 cut(s) | 986, 1488, 1742, 1978 |
| FauNDI | CATATG | 1 cut(s) | 526 |
| FblI | GTMKAC | 2 cut(s) | 668, 1524 |
| FokI | GGATG | 4 cut(s) | 242, 932, 1458, 2225 |
| FriOI | GRGCYC | 2 cut(s) | 203, 960 |
| FspBI | CTAG | 8 cut(s) | 594, 645, 953, 1064, 1373, 1749, 2036, 2199 |
| GlaI | GCGC | 2 cut(s) | 412, 2121 |
| GsaI | CCCAGC | 1 cut(s) | 685 |
| HaeII | RGCGCY | 1 cut(s) | 2123 |
| HaeIII | GGCC | 6 cut(s) | 71, 138, 1918, 2005, 2127, 2187 |
| HapII | CCGG | 8 cut(s) | 195, 482, 1567, 1583, 1692, 1848, 2075, 2110 |
| HgaI | GACGC | 1 cut(s) | 2024 |
| HhaI | GCGC | 2 cut(s) | 413, 2122 |
| Hin1I | GRCGYC | 1 cut(s) | 2016 |
| Hin6I | GCGC | 2 cut(s) | 411, 2120 |
| HinP1I | GCGC | 2 cut(s) | 411, 2120 |
| HindIII | AAGCTT | 1 cut(s) | 726 |
| HpaII | CCGG | 8 cut(s) | 195, 482, 1567, 1583, 1692, 1848, 2075, 2110 |
| HphI | GGTGA | 4 cut(s) | 481, 699, 897, 1379 |
| Hpy166II | GTNNAC | 5 cut(s) | 244, 669, 1033, 1370, 1525 |
| Hpy8I | GTNNAC | 5 cut(s) | 244, 669, 1033, 1370, 1525 |
| HpyAV | CCTTC | 7 cut(s) | 786, 1105, 1155, 1334, 1499, 1655, 2080 |
| HpyCH4III | ACNGT | 6 cut(s) | 466, 496, 585, 631, 666, 1434 |
| HpyCH4IV | ACGT | 3 cut(s) | 375, 453, 1977 |
| HpySE526I | ACGT | 3 cut(s) | 375, 453, 1977 |
| Hsp92I | GRCGYC | 1 cut(s) | 2016 |
| HspAI | GCGC | 2 cut(s) | 411, 2120 |
| KpnI | GGTACC | 1 cut(s) | 482 |
| Kzo9I | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| LmnI | GCTCC | 2 cut(s) | 198, 1496 |
| LweI | GCATC | 1 cut(s) | 1402 |
| MaeI | CTAG | 8 cut(s) | 594, 645, 953, 1064, 1373, 1749, 2036, 2199 |
| MaeII | ACGT | 3 cut(s) | 375, 453, 1977 |
| MaeIII | GTNAC | 7 cut(s) | 352, 705, 903, 1679, 1780, 1820, 2222 |
| MalI | GATC | 5 cut(s) | 521, 535, 1557, 1830, 2079 |
| MboI | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| MfeI | CAATTG | 2 cut(s) | 1284, 2204 |
| MflI | RGATCY | 2 cut(s) | 519, 2077 |
| MhlI | GDGCHC | 2 cut(s) | 203, 960 |
| MlsI | TGGCCA | 2 cut(s) | 71, 2127 |
| MluNI | TGGCCA | 2 cut(s) | 71, 2127 |
| MlyI | GAGTC | 4 cut(s) | 65, 1769, 1896, 2251 |
| MmeI | TCCRAC | 1 cut(s) | 482 |
| Mox20I | TGGCCA | 2 cut(s) | 71, 2127 |
| MroXI | GAANNNNTTC | 1 cut(s) | 727 |
| MscI | TGGCCA | 2 cut(s) | 71, 2127 |
| MseI | TTAA | 9 cut(s) | 162, 222, 1215, 1686, 1995, 2010, 2042, 2106, 2305 |
| MslI | CAYNNNNRTG | 3 cut(s) | 467, 851, 1716 |
| Msp20I | TGGCCA | 2 cut(s) | 71, 2127 |
| MspI | CCGG | 8 cut(s) | 195, 482, 1567, 1583, 1692, 1848, 2075, 2110 |
| MspR9I | CCNGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| MunI | CAATTG | 2 cut(s) | 1284, 2204 |
| Mva1269I | GAATGC | 2 cut(s) | 1857, 2146 |
| MvnI | CGCG | 1 cut(s) | 571 |
| NciI | CCSGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| NdeI | CATATG | 1 cut(s) | 526 |
| NdeII | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| NheI | GCTAGC | 2 cut(s) | 593, 2035 |
| NlaIV | GGNNCC | 4 cut(s) | 480, 838, 1607, 1966 |
| NmuCI | GTSAC | 5 cut(s) | 705, 903, 1679, 1780, 2222 |
| NspI | RCATGY | 2 cut(s) | 979, 1503 |
| OliI | CACNNNNGTG | 1 cut(s) | 467 |
| PagI | TCATGA | 1 cut(s) | 441 |
| PciI | ACATGT | 1 cut(s) | 975 |
| PctI | GAATGC | 2 cut(s) | 1857, 2146 |
| PdmI | GAANNNNTTC | 1 cut(s) | 727 |
| PfeI | GAWTC | 5 cut(s) | 27, 363, 438, 608, 929 |
| PflFI | GACNNNGTC | 1 cut(s) | 1778 |
| PfoI | TCCNGGA | 2 cut(s) | 194, 1565 |
| PinAI | ACCGGT | 1 cut(s) | 2109 |
| PleI | GAGTC | 4 cut(s) | 64, 1769, 1895, 2250 |
| PpsI | GAGTC | 4 cut(s) | 64, 1769, 1895, 2250 |
| PpuMI | RGGWCCY | 1 cut(s) | 1965 |
| PscI | ACATGT | 1 cut(s) | 975 |
| Psp124BI | GAGCTC | 2 cut(s) | 203, 960 |
| Psp5II | RGGWCCY | 1 cut(s) | 1965 |
| PspEI | GGTNACC | 1 cut(s) | 903 |
| PspFI | CCCAGC | 1 cut(s) | 681 |
| PspN4I | GGNNCC | 4 cut(s) | 480, 838, 1607, 1966 |
| PspPI | GGNCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| PspPPI | RGGWCCY | 1 cut(s) | 1965 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1656, 1688 |
| PstI | CTGCAG | 1 cut(s) | 1108 |
| PsuI | RGATCY | 2 cut(s) | 519, 2077 |
| PsyI | GACNNNGTC | 1 cut(s) | 1778 |
| RseI | CAYNNNNRTG | 3 cut(s) | 467, 851, 1716 |
| SacI | GAGCTC | 2 cut(s) | 203, 960 |
| SaqAI | TTAA | 9 cut(s) | 162, 222, 1215, 1686, 1995, 2010, 2042, 2106, 2305 |
| Sau3AI | GATC | 5 cut(s) | 519, 533, 1555, 1828, 2077 |
| Sau96I | GGNCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| ScaI | AGTACT | 1 cut(s) | 1790 |
| SchI | GAGTC | 4 cut(s) | 65, 1769, 1896, 2251 |
| ScrFI | CCNGG | 4 cut(s) | 196, 1567, 1583, 1692 |
| SduI | GDGCHC | 2 cut(s) | 203, 960 |
| SfaNI | GCATC | 1 cut(s) | 1402 |
| SfcI | CTRYAG | 2 cut(s) | 447, 1104 |
| SinI | GGWCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 467, 851, 1716 |
| SmlI | CTYRAG | 6 cut(s) | 264, 715, 959, 1328, 2020, 2236 |
| SmoI | CTYRAG | 6 cut(s) | 264, 715, 959, 1328, 2020, 2236 |
| SsiI | CCGC | 2 cut(s) | 41, 65 |
| SspMI | CTAG | 8 cut(s) | 594, 645, 953, 1064, 1373, 1749, 2036, 2199 |
| SstI | GAGCTC | 2 cut(s) | 203, 960 |
| StyD4I | CCNGG | 4 cut(s) | 194, 1565, 1581, 1690 |
| StyI | CCWWGG | 1 cut(s) | 1592 |
| TaaI | ACNGT | 6 cut(s) | 466, 496, 585, 631, 666, 1434 |
| TaiI | ACGT | 3 cut(s) | 378, 456, 1980 |
| TaqI | TCGA | 7 cut(s) | 75, 339, 759, 1140, 1159, 1176, 1827 |
| TatI | WGTACW | 6 cut(s) | 243, 843, 978, 1530, 1672, 1788 |
| TfiI | GAWTC | 5 cut(s) | 27, 363, 438, 608, 929 |
| Tru1I | TTAA | 9 cut(s) | 162, 222, 1215, 1686, 1995, 2010, 2042, 2106, 2305 |
| Tru9I | TTAA | 9 cut(s) | 162, 222, 1215, 1686, 1995, 2010, 2042, 2106, 2305 |
| TscAI | CASTG | 4 cut(s) | 499, 808, 1188, 2167 |
| TseFI | GTSAC | 5 cut(s) | 705, 903, 1679, 1780, 2222 |
| Tsp45I | GTSAC | 5 cut(s) | 705, 903, 1679, 1780, 2222 |
| TspDTI | ATGAA | 8 cut(s) | 146, 421, 430, 711, 749, 1041, 1637, 2153 |
| TspGWI | ACGGA | 3 cut(s) | 281, 804, 1394 |
| TspRI | CASTG | 4 cut(s) | 499, 808, 1188, 2167 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1778 |
| VpaK11BI | GGWCC | 4 cut(s) | 1352, 1483, 1708, 1965 |
| XapI | RAATTY | 2 cut(s) | 1172, 1313 |
| XbaI | TCTAGA | 1 cut(s) | 644 |
| XceI | RCATGY | 2 cut(s) | 979, 1503 |
| XmiI | GTMKAC | 2 cut(s) | 668, 1524 |
| XmnI | GAANNNNTTC | 1 cut(s) | 727 |
| XspI | CTAG | 8 cut(s) | 594, 645, 953, 1064, 1373, 1749, 2036, 2199 |
| ZrmI | AGTACT | 1 cut(s) | 1790 |