pycom17g21970

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000353
Physical Location & Seq
Forward (+)
20400169 .. 20403972
3804 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g21970.8

Sequence Viewer

Length: 2388 bp
ATGGGAGTTAGAGGGAAAGCAGGAGGAAATAAGAAAGAAGAGTCAGTGGCAGTGGCAATAGACAAGGACAAAGGAAGCCAATATGCAATCAAATGGACCGTTGATAATCTTCTTTCCAGAGGCCAATCTCTCACATTGCTCCATGTCAAGCAAACTGCAGGCTCCAACCAAACTGGGCAATCGAAGGAGGAGGCTGGAAAGGTGTACCACAATCCATCTGATACTGAAGCCAAGGAACTATTTCTTCCATTTCGTTGCTATTGCACTAAAAAGGCTATAAAATGCAACGAAATTATAATTGAAGACACTGATATTTCTAGAGCACTCGTAAACTATGTTGCCATTAATGTATTTGAGGTTTTGGTTCTTGGCACACCATCAAAAAGTCACCTTTTGAGGTTCATGATCACAGACGTTCCAAGCACCGTGTCAAAAAGGGCACCCGACTTTTGCACAGTGTACGTCATTGGTAAATCAAAGATTTCATTTGTCAAATCTGCTACCTTTTCCGTACCCCAAAGAGCTCCGCCACCAGCTAAGCGAATAGAGCACCAAGCCAGCACAGCTTCGGAAGAAAATAACGCACAAATCGTGATCTACAGCCCTAAACCTAGAGCCCCAGAATCACCACGGTATCCAACCAAAAGGACACAGTATCTACCGGAAAGGCCACATTATCCAGATCGTAGCGAGCCAAAAGAAGAAGAAATCATGTCACCATTCAGTAGAGGAAGAAATGCAATGAACAAAACACACGAGCTCCCACCAGGCAGTGATATATCATTTGTCAGCAGAGGATCGCCAAGCATGGAACACGTGTCTGCTAATTCATTCTATGATAGCATGTCACCAGGAATGGCCTCTGGATTGTCAATGAACTCCGAATTTGACAGCAGAAGCTCTACTTCTACGGCGTCTTATTCTGGAACAAAATTTATTGACATGAGCTCTCCACGGCGCGATTTCTCATCATCCTCTTTCGAAAGTGGAAACTCGTGGCCATCATCACAGCAGGATGATGTGGAAGCTGAAATGAGGCGGCTCAGGCAGGAGCTCAAACAAACAAGGGAAATGTACGCCACAGCCTGCAAGGAGGCAGTCACAGCAAAACATAAGGCAACAGAAGTTAACAGATGGAAACGGGAAGAAGAAATGCGATTAGAAGAGGCACGACTAGCTGAGGAAGCTGCAAGGGAACTTGTAGAAAAGGAGAAAGCAAAATGTAGGGCTGCCATTGAGGCAGCAGAAGCGGCTCAACGGGTTGCTGAACTCGAATCGCGGAAAAGGAGGAATGCAGAATTGAAAGCCCTCAAAGAAGTTGAACAGAGGAAGAAGTCAATAGATCCAAGAGCATATGAGCTCAGGTACAGGAAATACACAATCGAGGAGATTGAAGCGGCAACATATGCTTTTTCGGAGGGTTTCAAGATTGGAGAAGGAGGCTATGGGCCAGTATATAGAGGTGAACTAGATCACACACCGGTGGCAATAAAAGTTTTACGTCCAGACGCATCACAAGGACAGTCGCAGTTCAAGCAAGAGGTTGAAATACTGAGCTGCATAAGGCATCCAAACATGGTTCTGCTTCTTGGAGCATGTCCAGAGTATGGCTGCCTGGTCTACGAGTACATGGCCAATGGGAGCTTAGAAGACCGTCTCTTCCGGCGAGGCAACACCCCAGTCATTCCTTGGCAGATACGGTTCAGAATTGCTGCCGAAATTGGGACTGGGATTTTGTTCCTTCATCAGACCAAGCCAGAACCCATTGTACACCGAGACCTAAAACCGGACAATATTTTGCTAGACTATAACTTTGTGAGCAAGATTAGCGATGTAGGTTTAGCCAGGCTTGTCCCTCCATCAGTAGCCGACTCTGTCACTCAGTATCACATGACATCAACGGCCGGAACATTCTGTTATATCGACCCAGAGTACCAGCAAACCGGAATGCTTGGAGTAAAATCTGATGTCTACTCACTTGGGGTCATGCTTCTACAACTAATAACTGCCAGACCACCAATGGGTTTGACTCATCATGTTGAGCATGCTATTGAGCGTGGGACTTTCCTCGACATTCTTGATCCTGCTGTTCCTGATTGGCCTGTTGAGGAAACAATGAAGTTTGCTAAGGTAGCTTTGCAGTGTGCTGAAATGAGGCGAAGAGACAGACCGGACCTCGGGAAGGTTGTTCTACCCGAGCTTAACAGATTGAGAGAACTTGCTCAAGATAGCTTGAACCGCGCCATGTTTGGCGGCGGTGAAGTATTAGCAGCAAAACAAGGCCTCACTTCCACAAGACAAGATGTGATAAGTGAGGCCAATCTAACGCGATCCGGATATGAGAGCTCAATGAGTCAATCAAGCACATCATCTTATCCCGGAAGATGA

Protein Analysis

796

Amino Acids

88.95

Weight (kDa)

8.27

Isoelectric Point (pI)

59.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 296
AccB1I GGYRCC 1 cut(s) 439
AccB7I CCANNNNNTGG 1 cut(s) 1607
AccI GTMKAC 2 cut(s) 1620, 1971
AccII CGCG 4 cut(s) 960, 1279, 2241, 2329
AccIII TCCGGA 1 cut(s) 2333
AciI CCGC 8 cut(s) 527, 1039, 1250, 1279, 1397, 2239, 2253, 2256
AclWI GGATC 4 cut(s) 805, 1337, 2075, 2325
AcoI YGGCCR 3 cut(s) 998, 1632, 1902
AcsI RAATTY 2 cut(s) 884, 932
AcuI CTGAAG 1 cut(s) 246
AcvI CACGTG 1 cut(s) 817
AcyI GRCGYC 1 cut(s) 914
AfaI GTAC 8 cut(s) 206, 461, 513, 1076, 1367, 1628, 1770, 1934
AfiI CCNNNNNNNGG 6 cut(s) 1607, 1722, 1786, 2021, 2177, 2182
AflIII ACRYGT 2 cut(s) 814, 816
AgeI ACCGGT 1 cut(s) 1480
AgsI TTSAA 8 cut(s) 302, 1303, 1322, 1394, 1426, 1534, 1547, 2236
AjnI CCWGG 4 cut(s) 766, 850, 1614, 1844
AleI CACNNNNGTG 1 cut(s) 1481
Alw21I GWGCWC 8 cut(s) 325, 526, 552, 762, 950, 1056, 1362, 2348
Alw26I GTCTC 3 cut(s) 1661, 1770, 2157
AlwI GGATC 4 cut(s) 805, 1337, 2075, 2325
Ama87I CYCGRG 2 cut(s) 2177, 2195
Aor13HI TCCGGA 1 cut(s) 2333
ApeKI GCWGC 7 cut(s) 1187, 1229, 1241, 1557, 1611, 1712, 2270
ApoI RAATTY 2 cut(s) 884, 932
ArsI GACNNNNNNTTYG 4 cut(s) 1717, 1749, 1796, 1828
AseI ATTAAT 1 cut(s) 345
AsiGI ACCGGT 1 cut(s) 1480
Asp700I GAANNNNTTC 1 cut(s) 240
AspLEI GCGC 2 cut(s) 960, 2243
AspS9I GGNCC 3 cut(s) 96, 1448, 2173
AsuC2I CCSGG 1 cut(s) 2379
AsuHPI GGTGA 6 cut(s) 380, 618, 708, 840, 1475, 2270
AsuII TTCGAA 1 cut(s) 981
AvaI CYCGRG 2 cut(s) 2177, 2195
AvaII GGWCC 2 cut(s) 96, 2173
BaeGI GKGCMC 1 cut(s) 442
BaeI ACNNNNGTAYC 2 cut(s) 617, 650
BalI TGGCCA 2 cut(s) 1000, 1634
BanI GGYRCC 1 cut(s) 439
BanII GRGCYC 7 cut(s) 526, 619, 762, 950, 1056, 1362, 2348
BauI CACGAG 2 cut(s) 755, 994
BbrPI CACGTG 1 cut(s) 817
BbsI GAAGAC 2 cut(s) 309, 1656
Bbv12I GWGCWC 8 cut(s) 325, 526, 552, 762, 950, 1056, 1362, 2348
BbvCI CCTCAGC 1 cut(s) 1179
BbvI GCAGC 7 cut(s) 1174, 1216, 1253, 1544, 1598, 1699, 2282
BccI CCATC 5 cut(s) 223, 385, 1009, 1128, 1867
BceAI ACGGC 3 cut(s) 927, 971, 1917
BciT130I CCWGG 4 cut(s) 768, 852, 1616, 1846
BciVI GTATCC 1 cut(s) 645
BclI TGATCA 1 cut(s) 405
BcnI CCSGG 1 cut(s) 2379
BcoDI GTCTC 3 cut(s) 1661, 1770, 2157
BfaI CTAG 5 cut(s) 318, 612, 1175, 1469, 1802
BfmI CTRYAG 2 cut(s) 156, 598
BfuI GTATCC 1 cut(s) 645
BglI GCCNNNNNGGC 1 cut(s) 1238
BlpI GCTNAGC 1 cut(s) 537
Bme1390I CCNGG 5 cut(s) 768, 852, 1616, 1846, 2379
Bme18I GGWCC 2 cut(s) 96, 2173
BmeT110I CYCGRG 2 cut(s) 2177, 2195
BmgT120I GGNCC 3 cut(s) 96, 1448, 2173
BmiI GGNNCC 2 cut(s) 163, 441
BmrFI CCNGG 5 cut(s) 768, 852, 1616, 1846, 2379
BmrI ACTGGG 3 cut(s) 183, 1673, 1737
BmsI GCATC 2 cut(s) 1520, 1576
BmuI ACTGGG 3 cut(s) 183, 1673, 1737
BpiI GAAGAC 2 cut(s) 309, 1656
Bpu10I CCTNAGC 4 cut(s) 1043, 1179, 1361, 2127
Bpu1102I GCTNAGC 1 cut(s) 537
Bpu14I TTCGAA 1 cut(s) 981
BpuEI CTTGAG 1 cut(s) 2208
BpuMI CCSGG 1 cut(s) 2379
BsaAI YACGTR 1 cut(s) 817
BsaHI GRCGYC 1 cut(s) 914
BsaI GGTCTC 1 cut(s) 1770
BsaJI CCNNGG 5 cut(s) 231, 629, 953, 1688, 2176
BsaWI WCCGGW 6 cut(s) 661, 1480, 1786, 1943, 2170, 2333
BsaXI ACNNNNNCTCC 2 cut(s) 744, 774
Bsc4I CCNNNNNNNGG 6 cut(s) 1607, 1722, 1786, 2021, 2177, 2182
Bse118I RCCGGY 1 cut(s) 1480
Bse1I ACTGG 4 cut(s) 178, 1451, 1679, 1732
Bse3DI GCAATG 2 cut(s) 134, 747
BseAI TCCGGA 1 cut(s) 2333
BseBI CCWGG 4 cut(s) 768, 852, 1616, 1846
BseDI CCNNGG 5 cut(s) 231, 629, 953, 1688, 2176
BseGI GGATG 3 cut(s) 971, 1021, 1567
BseLI CCNNNNNNNGG 6 cut(s) 1607, 1722, 1786, 2021, 2177, 2182
BseMI GCAATG 2 cut(s) 134, 747
BseMII CTCAG 5 cut(s) 1057, 1170, 1375, 1544, 1895
BseNI ACTGG 4 cut(s) 178, 1451, 1679, 1732
BseRI GAGGAG 2 cut(s) 203, 1400
BseSI GKGCMC 1 cut(s) 442
BseX3I CGGCCG 1 cut(s) 1902
BseXI GCAGC 7 cut(s) 1174, 1216, 1253, 1544, 1598, 1699, 2282
Bsh1236I CGCG 4 cut(s) 960, 1279, 2241, 2329
Bsh1285I CGRYCG 1 cut(s) 1905
BshNI GGYRCC 1 cut(s) 439
BshTI ACCGGT 1 cut(s) 1480
BsiEI CGRYCG 1 cut(s) 1905
BsiHKAI GWGCWC 8 cut(s) 325, 526, 552, 762, 950, 1056, 1362, 2348
BsiHKCI CYCGRG 2 cut(s) 2177, 2195
BsiSI CCGG 9 cut(s) 662, 1481, 1663, 1787, 1905, 1944, 2171, 2334, 2379
BslFI GGGAC 3 cut(s) 1738, 1838, 2074
BslI CCNNNNNNNGG 6 cut(s) 1607, 1722, 1786, 2021, 2177, 2182
BsmAI GTCTC 3 cut(s) 1661, 1770, 2157
BsmBI CGTCTC 1 cut(s) 1661
BsmFI GGGAC 3 cut(s) 1738, 1838, 2074
BsmI GAATGC 2 cut(s) 1297, 1953
Bso31I GGTCTC 1 cut(s) 1770
BsoBI CYCGRG 2 cut(s) 2177, 2195
Bsp119I TTCGAA 1 cut(s) 981
Bsp13I TCCGGA 1 cut(s) 2333
Bsp1407I TGTACA 1 cut(s) 1768
Bsp143I GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
Bsp1720I GCTNAGC 1 cut(s) 537
BspACI CCGC 8 cut(s) 527, 1039, 1250, 1279, 1397, 2239, 2253, 2256
BspCNI CTCAG 5 cut(s) 1056, 1171, 1374, 1545, 1894
BspEI TCCGGA 1 cut(s) 2333
BspFNI CGCG 4 cut(s) 960, 1279, 2241, 2329
BspHI TCATGA 1 cut(s) 402
BspLI GGNNCC 2 cut(s) 163, 441
BspMAI CTGCAG 1 cut(s) 160
BspPI GGATC 4 cut(s) 805, 1337, 2075, 2325
BspT104I TTCGAA 1 cut(s) 981
BspT107I GGYRCC 1 cut(s) 439
BspTNI GGTCTC 1 cut(s) 1770
BsrDI GCAATG 2 cut(s) 134, 747
BsrFI RCCGGY 1 cut(s) 1480
BsrGI TGTACA 1 cut(s) 1768
BsrI ACTGG 4 cut(s) 178, 1451, 1679, 1732
BssAI RCCGGY 1 cut(s) 1480
BssECI CCNNGG 5 cut(s) 231, 629, 953, 1688, 2176
BssMI GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
BssNI GRCGYC 1 cut(s) 914
BssSI CACGAG 2 cut(s) 755, 994
BssT1I CCWWGG 2 cut(s) 231, 1688
Bst2BI CACGAG 2 cut(s) 755, 994
Bst2UI CCWGG 4 cut(s) 768, 852, 1616, 1846
Bst4CI ACNGT 8 cut(s) 100, 427, 457, 633, 654, 1524, 1655, 1701
Bst6I CTCTTC 4 cut(s) 33, 1158, 1664, 2155
BstACI GRCGYC 1 cut(s) 914
BstAPI GCANNNNNTGC 1 cut(s) 1406
BstAUI TGTACA 1 cut(s) 1768
BstBAI YACGTR 1 cut(s) 817
BstBI TTCGAA 1 cut(s) 981
BstC8I GCNNGC 5 cut(s) 160, 559, 692, 1087, 2046
BstDEI CTNAG 8 cut(s) 537, 1043, 1179, 1361, 1553, 1645, 1881, 2127
BstDSI CCRYGG 2 cut(s) 629, 953
BstENI CCTNNNNNAGG 1 cut(s) 2180
BstF5I GGATG 3 cut(s) 971, 1021, 1567
BstFNI CGCG 4 cut(s) 960, 1279, 2241, 2329
BstHHI GCGC 2 cut(s) 960, 2243
BstKTI GATC 8 cut(s) 408, 597, 685, 800, 1345, 1474, 2083, 2333
BstMAI GTCTC 3 cut(s) 1661, 1770, 2157
BstMBI GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
BstMCI CGRYCG 1 cut(s) 1905
BstNI CCWGG 4 cut(s) 768, 852, 1616, 1846
BstNSI RCATGY 3 cut(s) 847, 1599, 2048
BstSCI CCNGG 5 cut(s) 766, 850, 1614, 1844, 2377
BstSFI CTRYAG 2 cut(s) 156, 598
BstSLI GKGCMC 1 cut(s) 442
BstUI CGCG 4 cut(s) 960, 1279, 2241, 2329
BstV1I GCAGC 7 cut(s) 1174, 1216, 1253, 1544, 1598, 1699, 2282
BstV2I GAAGAC 2 cut(s) 309, 1656
BstX2I RGATCY 1 cut(s) 1342
BstYI RGATCY 1 cut(s) 1342
BstZI CGGCCG 1 cut(s) 1902
BsuI GTATCC 1 cut(s) 645
BtgI CCRYGG 2 cut(s) 629, 953
BtgZI GCGATG 1 cut(s) 1845
BtsCI GGATG 3 cut(s) 971, 1021, 1567
BtsI GCAGTG 3 cut(s) 57, 778, 2147
BtsIMutI CAGTG 6 cut(s) 51, 57, 306, 462, 778, 2147
Cac8I GCNNGC 5 cut(s) 160, 559, 692, 1087, 2046
CciI TCATGA 1 cut(s) 402
CfoI GCGC 2 cut(s) 960, 2243
Cfr10I RCCGGY 1 cut(s) 1480
Cfr13I GGNCC 3 cut(s) 96, 1448, 2173
CseI GACGC 2 cut(s) 903, 1517
Csp6I GTAC 8 cut(s) 205, 460, 512, 1075, 1366, 1627, 1769, 1933
CspAI ACCGGT 1 cut(s) 1480
CviQI GTAC 8 cut(s) 205, 460, 512, 1075, 1366, 1627, 1769, 1933
DdeI CTNAG 8 cut(s) 537, 1043, 1179, 1361, 1553, 1645, 1881, 2127
DpnI GATC 8 cut(s) 407, 596, 684, 799, 1344, 1473, 2082, 2332
DpnII GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
EaeI YGGCCR 3 cut(s) 998, 1632, 1902
EagI CGGCCG 1 cut(s) 1902
Eam1104I CTCTTC 4 cut(s) 33, 1158, 1664, 2155
EarI CTCTTC 4 cut(s) 33, 1158, 1664, 2155
EciI GGCGGA 1 cut(s) 516
Ecl136II GAGCTC 6 cut(s) 524, 760, 948, 1054, 1360, 2346
EclXI CGGCCG 1 cut(s) 1902
Eco130I CCWWGG 2 cut(s) 231, 1688
Eco147I AGGCCT 1 cut(s) 2283
Eco24I GRGCYC 7 cut(s) 526, 619, 762, 950, 1056, 1362, 2348
Eco31I GGTCTC 1 cut(s) 1770
Eco47I GGWCC 2 cut(s) 96, 2173
Eco52I CGGCCG 1 cut(s) 1902
Eco53kI GAGCTC 6 cut(s) 524, 760, 948, 1054, 1360, 2346
Eco57I CTGAAG 1 cut(s) 246
Eco72I CACGTG 1 cut(s) 817
Eco88I CYCGRG 2 cut(s) 2177, 2195
EcoICRI GAGCTC 6 cut(s) 524, 760, 948, 1054, 1360, 2346
EcoNI CCTNNNNNAGG 1 cut(s) 2180
EcoRII CCWGG 4 cut(s) 766, 850, 1614, 1844
EcoT14I CCWWGG 2 cut(s) 231, 1688
EcoT38I GRGCYC 7 cut(s) 526, 619, 762, 950, 1056, 1362, 2348
ErhI CCWWGG 2 cut(s) 231, 1688
Esp3I CGTCTC 1 cut(s) 1661
FalI AAGNNNNNCTT 2 cut(s) 889, 921
FaqI GGGAC 3 cut(s) 1738, 1838, 2074
FauNDI CATATG 2 cut(s) 1354, 1405
FbaI TGATCA 1 cut(s) 405
FblI GTMKAC 2 cut(s) 1620, 1971
FokI GGATG 3 cut(s) 958, 1028, 1554
FriOI GRGCYC 7 cut(s) 526, 619, 762, 950, 1056, 1362, 2348
FspBI CTAG 5 cut(s) 318, 612, 1175, 1469, 1802
GlaI GCGC 2 cut(s) 959, 2242
HapII CCGG 9 cut(s) 662, 1481, 1663, 1787, 1905, 1944, 2171, 2334, 2379
HgaI GACGC 2 cut(s) 903, 1517
HhaI GCGC 2 cut(s) 960, 2243
Hin1I GRCGYC 1 cut(s) 914
Hin6I GCGC 2 cut(s) 958, 2241
HinP1I GCGC 2 cut(s) 958, 2241
HincII GTYRAC 1 cut(s) 1129
HindII GTYRAC 1 cut(s) 1129
HinfI GANTC 6 cut(s) 41, 623, 1274, 1871, 2029, 2353
HpaI GTTAAC 1 cut(s) 1129
HpaII CCGG 9 cut(s) 662, 1481, 1663, 1787, 1905, 1944, 2171, 2334, 2379
HphI GGTGA 6 cut(s) 380, 618, 708, 840, 1475, 2270
Hpy166II GTNNAC 8 cut(s) 205, 331, 460, 1129, 1466, 1621, 1771, 1972
Hpy188I TCNGA 7 cut(s) 220, 571, 883, 1417, 1706, 1749, 1966
Hpy8I GTNNAC 8 cut(s) 205, 331, 460, 1129, 1466, 1621, 1771, 1972
HpyAV CCTTC 4 cut(s) 178, 1430, 1751, 2176
HpyCH4III ACNGT 8 cut(s) 100, 427, 457, 633, 654, 1524, 1655, 1701
HpyCH4IV ACGT 4 cut(s) 414, 462, 816, 1501
HpyF3I CTNAG 8 cut(s) 537, 1043, 1179, 1361, 1553, 1645, 1881, 2127
HpySE526I ACGT 4 cut(s) 414, 462, 816, 1501
Hsp92I GRCGYC 1 cut(s) 914
HspAI GCGC 2 cut(s) 958, 2241
Kpn2I TCCGGA 1 cut(s) 2333
Ksp22I TGATCA 1 cut(s) 405
KspAI GTTAAC 1 cut(s) 1129
Kzo9I GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
LmnI GCTCC 7 cut(s) 144, 167, 529, 765, 1051, 1592, 1641
Lsp1109I GCAGC 7 cut(s) 1174, 1216, 1253, 1544, 1598, 1699, 2282
LweI GCATC 2 cut(s) 1520, 1576
MaeI CTAG 5 cut(s) 318, 612, 1175, 1469, 1802
MaeII ACGT 4 cut(s) 414, 462, 816, 1501
MaeIII GTNAC 5 cut(s) 386, 714, 846, 1099, 1876
MalI GATC 8 cut(s) 407, 596, 684, 799, 1344, 1473, 2082, 2332
MboI GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
MflI RGATCY 1 cut(s) 1342
MlsI TGGCCA 2 cut(s) 1000, 1634
MluCI AATT 8 cut(s) 291, 297, 826, 884, 932, 1298, 1707, 1719
MluNI TGGCCA 2 cut(s) 1000, 1634
MlyI GAGTC 4 cut(s) 50, 1865, 2023, 2362
MmeI TCCRAC 2 cut(s) 189, 662
Mox20I TGGCCA 2 cut(s) 1000, 1634
MroI TCCGGA 1 cut(s) 2333
MroXI GAANNNNTTC 1 cut(s) 240
MscI TGGCCA 2 cut(s) 1000, 1634
MseI TTAA 3 cut(s) 345, 1128, 2202
MslI CAYNNNNRTG 1 cut(s) 1481
Msp20I TGGCCA 2 cut(s) 1000, 1634
MspI CCGG 9 cut(s) 662, 1481, 1663, 1787, 1905, 1944, 2171, 2334, 2379
MspR9I CCNGG 5 cut(s) 768, 852, 1616, 1846, 2379
Mva1269I GAATGC 2 cut(s) 1297, 1953
MvaI CCWGG 4 cut(s) 768, 852, 1616, 1846
MvnI CGCG 4 cut(s) 960, 1279, 2241, 2329
NciI CCSGG 1 cut(s) 2379
NdeI CATATG 2 cut(s) 1354, 1405
NdeII GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
NlaIV GGNNCC 2 cut(s) 163, 441
NmuCI GTSAC 5 cut(s) 386, 714, 846, 1099, 1876
NspI RCATGY 3 cut(s) 847, 1599, 2048
NspV TTCGAA 1 cut(s) 981
OliI CACNNNNGTG 1 cut(s) 1481
PaeI GCATGC 1 cut(s) 2048
PagI TCATGA 1 cut(s) 402
PceI AGGCCT 1 cut(s) 2283
PcsI WCGNNNNNNNCGW 1 cut(s) 588
PctI GAATGC 2 cut(s) 1297, 1953
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 2 cut(s) 623, 1274
PflFI GACNNNGTC 1 cut(s) 1874
PflMI CCANNNNNTGG 1 cut(s) 1607
PfoI TCCNGGA 1 cut(s) 2377
PinAI ACCGGT 1 cut(s) 1480
PleI GAGTC 4 cut(s) 49, 1865, 2023, 2361
PmaCI CACGTG 1 cut(s) 817
PmlI CACGTG 1 cut(s) 817
PpsI GAGTC 4 cut(s) 49, 1865, 2023, 2361
Ppu21I YACGTR 1 cut(s) 817
PshBI ATTAAT 1 cut(s) 345
PsiI TTATAA 1 cut(s) 296
Psp124BI GAGCTC 6 cut(s) 526, 762, 950, 1056, 1362, 2348
Psp6I CCWGG 4 cut(s) 766, 850, 1614, 1844
PspCI CACGTG 1 cut(s) 817
PspGI CCWGG 4 cut(s) 766, 850, 1614, 1844
PspN4I GGNNCC 2 cut(s) 163, 441
PspPI GGNCC 3 cut(s) 96, 1448, 2173
PsrI GAACNNNNNNTAC 2 cut(s) 1752, 1784
PstI CTGCAG 1 cut(s) 160
PsuI RGATCY 1 cut(s) 1342
PsyI GACNNNGTC 1 cut(s) 1874
RsaI GTAC 8 cut(s) 206, 461, 513, 1076, 1367, 1628, 1770, 1934
RsaNI GTAC 8 cut(s) 205, 460, 512, 1075, 1366, 1627, 1769, 1933
RseI CAYNNNNRTG 1 cut(s) 1481
SacI GAGCTC 6 cut(s) 526, 762, 950, 1056, 1362, 2348
SaqAI TTAA 3 cut(s) 345, 1128, 2202
Sau3AI GATC 8 cut(s) 405, 594, 682, 797, 1342, 1471, 2080, 2330
Sau96I GGNCC 3 cut(s) 96, 1448, 2173
SchI GAGTC 4 cut(s) 50, 1865, 2023, 2362
ScrFI CCNGG 5 cut(s) 768, 852, 1616, 1846, 2379
SfaNI GCATC 2 cut(s) 1520, 1576
SfcI CTRYAG 2 cut(s) 156, 598
SfuI TTCGAA 1 cut(s) 981
SgrAI CRCCGGYG 1 cut(s) 1480
SinI GGWCC 2 cut(s) 96, 2173
SmiMI CAYNNNNRTG 1 cut(s) 1481
SmlI CTYRAG 1 cut(s) 2223
SmoI CTYRAG 1 cut(s) 2223
SphI GCATGC 1 cut(s) 2048
Sse9I AATT 8 cut(s) 291, 297, 826, 884, 932, 1298, 1707, 1719
SseBI AGGCCT 1 cut(s) 2283
SsiI CCGC 8 cut(s) 527, 1039, 1250, 1279, 1397, 2239, 2253, 2256
SspI AATATT 1 cut(s) 1795
SspMI CTAG 5 cut(s) 318, 612, 1175, 1469, 1802
SstI GAGCTC 6 cut(s) 526, 762, 950, 1056, 1362, 2348
StuI AGGCCT 1 cut(s) 2283
StyD4I CCNGG 5 cut(s) 766, 850, 1614, 1844, 2377
StyI CCWWGG 2 cut(s) 231, 1688
TaaI ACNGT 8 cut(s) 100, 427, 457, 633, 654, 1524, 1655, 1701
TaiI ACGT 4 cut(s) 417, 465, 819, 1504
TaqI TCGA 6 cut(s) 182, 981, 1272, 1383, 1923, 2070
TasI AATT 8 cut(s) 291, 297, 826, 884, 932, 1298, 1707, 1719
TatI WGTACW 2 cut(s) 1626, 1768
TauI GCSGC 4 cut(s) 1042, 1253, 1400, 2256
TfiI GAWTC 2 cut(s) 623, 1274
Tru1I TTAA 3 cut(s) 345, 1128, 2202
Tru9I TTAA 3 cut(s) 345, 1128, 2202
TscAI CASTG 6 cut(s) 51, 57, 313, 462, 778, 2147
TseFI GTSAC 5 cut(s) 386, 714, 846, 1099, 1876
TseI GCWGC 7 cut(s) 1187, 1229, 1241, 1557, 1611, 1712, 2270
Tsp45I GTSAC 5 cut(s) 386, 714, 846, 1099, 1876
TspDTI ATGAA 7 cut(s) 391, 474, 758, 819, 890, 1733, 2132
TspGWI ACGGA 1 cut(s) 499
TspRI CASTG 6 cut(s) 51, 57, 313, 462, 778, 2147
Tth111I GACNNNGTC 1 cut(s) 1874
Van91I CCANNNNNTGG 1 cut(s) 1607
VpaK11BI GGWCC 2 cut(s) 96, 2173
VspI ATTAAT 1 cut(s) 345
XagI CCTNNNNNAGG 1 cut(s) 2180
XapI RAATTY 2 cut(s) 884, 932
XbaI TCTAGA 1 cut(s) 317
XceI RCATGY 3 cut(s) 847, 1599, 2048
XcmI CCANNNNNNNNNTGG 2 cut(s) 1686, 2017
XmiI GTMKAC 2 cut(s) 1620, 1971
XmnI GAANNNNTTC 1 cut(s) 240
XspI CTAG 5 cut(s) 318, 612, 1175, 1469, 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.