U-box domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 448 |
| AccI | GTMKAC | 1 cut(s) | 869 |
| AccII | CGCG | 1 cut(s) | 261 |
| AciI | CCGC | 3 cut(s) | 259, 533, 1520 |
| AclWI | GGATC | 4 cut(s) | 384, 1112, 1374, 1502 |
| AcoI | YGGCCR | 2 cut(s) | 348, 1292 |
| AcsI | RAATTY | 2 cut(s) | 920, 1429 |
| AfaI | GTAC | 3 cut(s) | 372, 517, 1037 |
| AfeI | AGCGCT | 1 cut(s) | 823 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1370, 1526 |
| AflIII | ACRYGT | 3 cut(s) | 635, 780, 1032 |
| AgsI | TTSAA | 7 cut(s) | 357, 403, 442, 671, 834, 936, 941 |
| AjiI | CACGTC | 2 cut(s) | 217, 867 |
| AjnI | CCWGG | 2 cut(s) | 51, 116 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 845, 877 |
| Alw21I | GWGCWC | 4 cut(s) | 635, 1017, 1074, 1342 |
| Alw26I | GTCTC | 1 cut(s) | 1259 |
| AlwI | GGATC | 4 cut(s) | 384, 1112, 1374, 1502 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 737 |
| Aor51HI | AGCGCT | 1 cut(s) | 823 |
| AoxI | GGCC | 5 cut(s) | 48, 121, 348, 394, 1292 |
| ApeKI | GCWGC | 3 cut(s) | 188, 556, 1094 |
| ApoI | RAATTY | 2 cut(s) | 920, 1429 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 940, 972 |
| AspLEI | GCGC | 2 cut(s) | 263, 824 |
| AspS9I | GGNCC | 2 cut(s) | 49, 121 |
| AsuC2I | CCSGG | 1 cut(s) | 1443 |
| AsuHPI | GGTGA | 4 cut(s) | 372, 672, 720, 1200 |
| AsuNHI | GCTAGC | 1 cut(s) | 1324 |
| BaeGI | GKGCMC | 1 cut(s) | 451 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 303, 336 |
| BalI | TGGCCA | 2 cut(s) | 350, 1294 |
| BanI | GGYRCC | 1 cut(s) | 448 |
| BanII | GRGCYC | 1 cut(s) | 1017 |
| Bbv12I | GWGCWC | 4 cut(s) | 635, 1017, 1074, 1342 |
| BbvCI | CCTCAGC | 2 cut(s) | 928, 1004 |
| BbvI | GCAGC | 3 cut(s) | 200, 568, 1106 |
| BccI | CCATC | 2 cut(s) | 391, 794 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1061, 1095 |
| BciT130I | CCWGG | 2 cut(s) | 53, 118 |
| BciVI | GTATCC | 1 cut(s) | 304 |
| BclI | TGATCA | 3 cut(s) | 103, 333, 1500 |
| BcnI | CCSGG | 1 cut(s) | 1443 |
| BcoDI | GTCTC | 1 cut(s) | 1259 |
| BfaI | CTAG | 6 cut(s) | 618, 651, 1010, 1172, 1325, 1540 |
| BfmI | CTRYAG | 1 cut(s) | 186 |
| BfoI | RGCGCY | 1 cut(s) | 825 |
| BfuI | GTATCC | 1 cut(s) | 304 |
| BisI | GCNGC | 4 cut(s) | 189, 534, 557, 1095 |
| BlpI | GCTNAGC | 1 cut(s) | 907 |
| BlsI | GCNGC | 4 cut(s) | 190, 535, 558, 1096 |
| Bme1390I | CCNGG | 3 cut(s) | 53, 118, 1443 |
| BmgBI | CACGTC | 2 cut(s) | 217, 867 |
| BmgT120I | GGNCC | 2 cut(s) | 49, 121 |
| BmiI | GGNNCC | 3 cut(s) | 122, 450, 537 |
| BmrFI | CCNGG | 3 cut(s) | 53, 118, 1443 |
| BmtI | GCTAGC | 1 cut(s) | 1328 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1046, 1078 |
| BpmI | CTGGAG | 1 cut(s) | 1050 |
| Bpu10I | CCTNAGC | 2 cut(s) | 928, 1004 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 907 |
| BpuEI | CTTGAG | 1 cut(s) | 1001 |
| BpuMI | CCSGG | 1 cut(s) | 1443 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1512 |
| BsaJI | CCNNGG | 2 cut(s) | 51, 117 |
| BsaWI | WCCGGW | 2 cut(s) | 451, 1363 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 845, 875 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1370, 1526 |
| Bse118I | RCCGGY | 1 cut(s) | 609 |
| Bse1I | ACTGG | 4 cut(s) | 513, 1141, 1295, 1295 |
| Bse3DI | GCAATG | 3 cut(s) | 134, 298, 711 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1512 |
| BseBI | CCWGG | 2 cut(s) | 53, 118 |
| BseDI | CCNNGG | 2 cut(s) | 51, 117 |
| BseGI | GGATG | 1 cut(s) | 979 |
| BseJI | GATNNNNATC | 1 cut(s) | 1512 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1370, 1526 |
| BseMI | GCAATG | 3 cut(s) | 134, 298, 711 |
| BseMII | CTCAG | 8 cut(s) | 855, 894, 921, 942, 981, 995, 1254, 1380 |
| BseNI | ACTGG | 4 cut(s) | 513, 1141, 1295, 1295 |
| BseSI | GKGCMC | 1 cut(s) | 451 |
| BseXI | GCAGC | 3 cut(s) | 200, 568, 1106 |
| BseYI | CCCAGC | 2 cut(s) | 191, 1144 |
| Bsh1236I | CGCG | 1 cut(s) | 261 |
| BshFI | GGCC | 5 cut(s) | 50, 123, 350, 396, 1294 |
| BshNI | GGYRCC | 1 cut(s) | 448 |
| BsiHKAI | GWGCWC | 4 cut(s) | 635, 1017, 1074, 1342 |
| BsiSI | CCGG | 6 cut(s) | 393, 452, 610, 1098, 1364, 1442 |
| BslFI | GGGAC | 3 cut(s) | 211, 305, 1267 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1370, 1526 |
| BsmAI | GTCTC | 1 cut(s) | 1259 |
| BsmBI | CGTCTC | 1 cut(s) | 1259 |
| BsmFI | GGGAC | 3 cut(s) | 211, 305, 1267 |
| BsmI | GAATGC | 1 cut(s) | 1522 |
| BsnI | GGCC | 5 cut(s) | 50, 123, 350, 396, 1294 |
| Bsp1286I | GDGCHC | 5 cut(s) | 451, 635, 1017, 1074, 1342 |
| Bsp1407I | TGTACA | 1 cut(s) | 1035 |
| Bsp143I | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 907 |
| BspACI | CCGC | 3 cut(s) | 259, 533, 1520 |
| BspANI | GGCC | 5 cut(s) | 50, 123, 350, 396, 1294 |
| BspCNI | CTCAG | 8 cut(s) | 854, 893, 920, 941, 982, 996, 1255, 1381 |
| BspFNI | CGCG | 1 cut(s) | 261 |
| BspLI | GGNNCC | 3 cut(s) | 122, 450, 537 |
| BspMAI | CTGCAG | 1 cut(s) | 190 |
| BspOI | GCTAGC | 1 cut(s) | 1328 |
| BspPI | GGATC | 4 cut(s) | 384, 1112, 1374, 1502 |
| BspT107I | GGYRCC | 1 cut(s) | 448 |
| BsrDI | GCAATG | 3 cut(s) | 134, 298, 711 |
| BsrFI | RCCGGY | 1 cut(s) | 609 |
| BsrGI | TGTACA | 1 cut(s) | 1035 |
| BsrI | ACTGG | 4 cut(s) | 513, 1141, 1295, 1295 |
| BssAI | RCCGGY | 1 cut(s) | 609 |
| BssECI | CCNNGG | 2 cut(s) | 51, 117 |
| BssMI | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| Bst2UI | CCWGG | 2 cut(s) | 53, 118 |
| Bst4CI | ACNGT | 5 cut(s) | 46, 202, 304, 1045, 1335 |
| Bst6I | CTCTTC | 1 cut(s) | 234 |
| BstAUI | TGTACA | 1 cut(s) | 1035 |
| BstC8I | GCNNGC | 4 cut(s) | 615, 656, 764, 1326 |
| BstDEI | CTNAG | 9 cut(s) | 841, 880, 907, 928, 990, 1004, 1263, 1309, 1389 |
| BstF5I | GGATG | 1 cut(s) | 979 |
| BstFNI | CGCG | 1 cut(s) | 261 |
| BstH2I | RGCGCY | 1 cut(s) | 825 |
| BstHHI | GCGC | 2 cut(s) | 263, 824 |
| BstKTI | GATC | 8 cut(s) | 106, 210, 336, 392, 1120, 1369, 1503, 1510 |
| BstMAI | GTCTC | 1 cut(s) | 1259 |
| BstMBI | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 267, 1325 |
| BstNI | CCWGG | 2 cut(s) | 53, 118 |
| BstNSI | RCATGY | 2 cut(s) | 784, 1036 |
| BstSCI | CCNGG | 3 cut(s) | 51, 116, 1441 |
| BstSFI | CTRYAG | 1 cut(s) | 186 |
| BstSLI | GKGCMC | 1 cut(s) | 451 |
| BstUI | CGCG | 1 cut(s) | 261 |
| BstV1I | GCAGC | 3 cut(s) | 200, 568, 1106 |
| BstX2I | RGATCY | 2 cut(s) | 389, 1366 |
| BstYI | RGATCY | 2 cut(s) | 389, 1366 |
| BsuI | GTATCC | 1 cut(s) | 304 |
| BsuRI | GGCC | 5 cut(s) | 50, 123, 350, 396, 1294 |
| BtrI | CACGTC | 2 cut(s) | 217, 867 |
| BtsCI | GGATG | 1 cut(s) | 979 |
| BtsI | GCAGTG | 1 cut(s) | 469 |
| BtsIMutI | CAGTG | 5 cut(s) | 51, 469, 1260, 1340, 1510 |
| Cac8I | GCNNGC | 4 cut(s) | 615, 656, 764, 1326 |
| CaiI | CAGNNNCTG | 1 cut(s) | 737 |
| CfoI | GCGC | 2 cut(s) | 263, 824 |
| Cfr10I | RCCGGY | 1 cut(s) | 609 |
| Cfr13I | GGNCC | 2 cut(s) | 49, 121 |
| CseI | GACGC | 1 cut(s) | 1276 |
| Csp6I | GTAC | 3 cut(s) | 371, 516, 1036 |
| CviAII | CATG | 8 cut(s) | 143, 543, 772, 781, 1033, 1229, 1426, 1438 |
| CviQI | GTAC | 3 cut(s) | 371, 516, 1036 |
| DdeI | CTNAG | 9 cut(s) | 841, 880, 907, 928, 990, 1004, 1263, 1309, 1389 |
| DpnI | GATC | 8 cut(s) | 105, 209, 335, 391, 1119, 1368, 1502, 1509 |
| DpnII | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| EaeI | YGGCCR | 2 cut(s) | 348, 1292 |
| Eam1104I | CTCTTC | 1 cut(s) | 234 |
| EarI | CTCTTC | 1 cut(s) | 234 |
| Ecl136II | GAGCTC | 1 cut(s) | 1015 |
| Eco24I | GRGCYC | 1 cut(s) | 1017 |
| Eco47III | AGCGCT | 1 cut(s) | 823 |
| Eco53kI | GAGCTC | 1 cut(s) | 1015 |
| EcoICRI | GAGCTC | 1 cut(s) | 1015 |
| EcoRI | GAATTC | 1 cut(s) | 1429 |
| EcoRII | CCWGG | 2 cut(s) | 51, 116 |
| EcoT38I | GRGCYC | 1 cut(s) | 1017 |
| Esp3I | CGTCTC | 1 cut(s) | 1259 |
| FaeI | CATG | 8 cut(s) | 146, 546, 775, 784, 1036, 1232, 1429, 1441 |
| FaqI | GGGAC | 3 cut(s) | 211, 305, 1267 |
| FatI | CATG | 8 cut(s) | 142, 542, 771, 780, 1032, 1228, 1425, 1437 |
| FbaI | TGATCA | 3 cut(s) | 103, 333, 1500 |
| FblI | GTMKAC | 1 cut(s) | 869 |
| Fnu4HI | GCNGC | 4 cut(s) | 189, 534, 557, 1095 |
| FokI | GGATG | 1 cut(s) | 986 |
| FriOI | GRGCYC | 1 cut(s) | 1017 |
| Fsp4HI | GCNGC | 4 cut(s) | 189, 534, 557, 1095 |
| FspBI | CTAG | 6 cut(s) | 618, 651, 1010, 1172, 1325, 1540 |
| GlaI | GCGC | 2 cut(s) | 262, 823 |
| GluI | GCNGC | 4 cut(s) | 189, 534, 557, 1095 |
| GsaI | CCCAGC | 2 cut(s) | 195, 1148 |
| GsuI | CTGGAG | 1 cut(s) | 1050 |
| HaeII | RGCGCY | 1 cut(s) | 825 |
| HaeIII | GGCC | 5 cut(s) | 50, 123, 350, 396, 1294 |
| HapII | CCGG | 6 cut(s) | 393, 452, 610, 1098, 1364, 1442 |
| HgaI | GACGC | 1 cut(s) | 1276 |
| HhaI | GCGC | 2 cut(s) | 263, 824 |
| Hin1II | CATG | 8 cut(s) | 146, 546, 775, 784, 1036, 1232, 1429, 1441 |
| Hin6I | GCGC | 2 cut(s) | 261, 822 |
| HinP1I | GCGC | 2 cut(s) | 261, 822 |
| HinfI | GANTC | 5 cut(s) | 227, 408, 581, 623, 809 |
| HpaII | CCGG | 6 cut(s) | 393, 452, 610, 1098, 1364, 1442 |
| HphI | GGTGA | 4 cut(s) | 372, 672, 720, 1200 |
| Hpy166II | GTNNAC | 4 cut(s) | 380, 518, 870, 1165 |
| Hpy188I | TCNGA | 7 cut(s) | 238, 413, 503, 580, 628, 844, 1159 |
| Hpy188III | TCNNGA | 8 cut(s) | 387, 813, 882, 1067, 1121, 1286, 1467, 1527 |
| Hpy8I | GTNNAC | 4 cut(s) | 380, 518, 870, 1165 |
| Hpy99I | CGWCG | 1 cut(s) | 755 |
| HpyAV | CCTTC | 2 cut(s) | 1244, 1369 |
| HpyCH4III | ACNGT | 5 cut(s) | 46, 202, 304, 1045, 1335 |
| HpyCH4IV | ACGT | 5 cut(s) | 216, 342, 637, 750, 866 |
| HpyCH4V | TGCA | 6 cut(s) | 188, 291, 462, 556, 570, 1050 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 267, 1325 |
| HpyF3I | CTNAG | 9 cut(s) | 841, 880, 907, 928, 990, 1004, 1263, 1309, 1389 |
| HpySE526I | ACGT | 5 cut(s) | 216, 342, 637, 750, 866 |
| Hsp92II | CATG | 8 cut(s) | 146, 546, 775, 784, 1036, 1232, 1429, 1441 |
| HspAI | GCGC | 2 cut(s) | 261, 822 |
| Ksp22I | TGATCA | 3 cut(s) | 103, 333, 1500 |
| Kzo9I | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| LmnI | GCTCC | 4 cut(s) | 144, 172, 541, 866 |
| Lsp1109I | GCAGC | 3 cut(s) | 200, 568, 1106 |
| MaeI | CTAG | 6 cut(s) | 618, 651, 1010, 1172, 1325, 1540 |
| MaeII | ACGT | 5 cut(s) | 216, 342, 637, 750, 866 |
| MaeIII | GTNAC | 8 cut(s) | 145, 212, 217, 298, 638, 678, 956, 1206 |
| MalI | GATC | 8 cut(s) | 105, 209, 335, 391, 1119, 1368, 1502, 1509 |
| MboI | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| MboII | GAAGA | 5 cut(s) | 242, 251, 989, 1161, 1430 |
| MfeI | CAATTG | 2 cut(s) | 357, 936 |
| MflI | RGATCY | 2 cut(s) | 389, 1366 |
| MhlI | GDGCHC | 5 cut(s) | 451, 635, 1017, 1074, 1342 |
| MlsI | TGGCCA | 2 cut(s) | 350, 1294 |
| MluCI | AATT | 8 cut(s) | 6, 107, 352, 357, 816, 920, 936, 1429 |
| MluNI | TGGCCA | 2 cut(s) | 350, 1294 |
| MlyI | GAGTC | 1 cut(s) | 221 |
| Mox20I | TGGCCA | 2 cut(s) | 350, 1294 |
| MscI | TGGCCA | 2 cut(s) | 350, 1294 |
| MseI | TTAA | 2 cut(s) | 1245, 1395 |
| Msp20I | TGGCCA | 2 cut(s) | 350, 1294 |
| MspA1I | CMGCKG | 1 cut(s) | 191 |
| MspI | CCGG | 6 cut(s) | 393, 452, 610, 1098, 1364, 1442 |
| MspR9I | CCNGG | 3 cut(s) | 53, 118, 1443 |
| MunI | CAATTG | 2 cut(s) | 357, 936 |
| Mva1269I | GAATGC | 1 cut(s) | 1522 |
| MvaI | CCWGG | 2 cut(s) | 53, 118 |
| MvnI | CGCG | 1 cut(s) | 261 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 267, 1325 |
| NciI | CCSGG | 1 cut(s) | 1443 |
| NdeII | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| NheI | GCTAGC | 1 cut(s) | 1324 |
| NlaIII | CATG | 8 cut(s) | 146, 546, 775, 784, 1036, 1232, 1429, 1441 |
| NlaIV | GGNNCC | 3 cut(s) | 122, 450, 537 |
| NmuCI | GTSAC | 6 cut(s) | 212, 217, 298, 678, 956, 1206 |
| NspI | RCATGY | 2 cut(s) | 784, 1036 |
| PciI | ACATGT | 2 cut(s) | 780, 1032 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 222 |
| PctI | GAATGC | 1 cut(s) | 1522 |
| PfeI | GAWTC | 4 cut(s) | 408, 581, 623, 809 |
| PkrI | GCNGC | 4 cut(s) | 190, 535, 558, 1096 |
| PleI | GAGTC | 1 cut(s) | 221 |
| PpsI | GAGTC | 1 cut(s) | 221 |
| PscI | ACATGT | 2 cut(s) | 780, 1032 |
| Psp124BI | GAGCTC | 1 cut(s) | 1017 |
| Psp6I | CCWGG | 2 cut(s) | 51, 116 |
| PspFI | CCCAGC | 2 cut(s) | 191, 1144 |
| PspGI | CCWGG | 2 cut(s) | 51, 116 |
| PspN4I | GGNNCC | 3 cut(s) | 122, 450, 537 |
| PspPI | GGNCC | 2 cut(s) | 49, 121 |
| PstI | CTGCAG | 1 cut(s) | 190 |
| PstNI | CAGNNNCTG | 1 cut(s) | 737 |
| PsuI | RGATCY | 2 cut(s) | 389, 1366 |
| PvuII | CAGCTG | 1 cut(s) | 191 |
| RsaI | GTAC | 3 cut(s) | 372, 517, 1037 |
| RsaNI | GTAC | 3 cut(s) | 371, 516, 1036 |
| SacI | GAGCTC | 1 cut(s) | 1017 |
| SaqAI | TTAA | 2 cut(s) | 1245, 1395 |
| SatI | GCNGC | 4 cut(s) | 189, 534, 557, 1095 |
| Sau3AI | GATC | 8 cut(s) | 103, 207, 333, 389, 1117, 1366, 1500, 1507 |
| Sau96I | GGNCC | 2 cut(s) | 49, 121 |
| SchI | GAGTC | 1 cut(s) | 221 |
| ScrFI | CCNGG | 3 cut(s) | 53, 118, 1443 |
| SduI | GDGCHC | 5 cut(s) | 451, 635, 1017, 1074, 1342 |
| SfcI | CTRYAG | 1 cut(s) | 186 |
| SmlI | CTYRAG | 1 cut(s) | 1016 |
| SmoI | CTYRAG | 1 cut(s) | 1016 |
| Sse9I | AATT | 8 cut(s) | 6, 107, 352, 357, 816, 920, 936, 1429 |
| SsiI | CCGC | 3 cut(s) | 259, 533, 1520 |
| SspI | AATATT | 1 cut(s) | 830 |
| SspMI | CTAG | 6 cut(s) | 618, 651, 1010, 1172, 1325, 1540 |
| SstI | GAGCTC | 1 cut(s) | 1017 |
| StyD4I | CCNGG | 3 cut(s) | 51, 116, 1441 |
| TaaI | ACNGT | 5 cut(s) | 46, 202, 304, 1045, 1335 |
| TaiI | ACGT | 5 cut(s) | 219, 345, 640, 753, 869 |
| TaqI | TCGA | 1 cut(s) | 946 |
| TasI | AATT | 8 cut(s) | 6, 107, 352, 357, 816, 920, 936, 1429 |
| TatI | WGTACW | 2 cut(s) | 515, 1035 |
| TauI | GCSGC | 1 cut(s) | 536 |
| TfiI | GAWTC | 4 cut(s) | 408, 581, 623, 809 |
| Tru1I | TTAA | 2 cut(s) | 1245, 1395 |
| Tru9I | TTAA | 2 cut(s) | 1245, 1395 |
| TscAI | CASTG | 5 cut(s) | 51, 469, 1267, 1340, 1510 |
| TseFI | GTSAC | 6 cut(s) | 212, 217, 298, 678, 956, 1206 |
| TseI | GCWGC | 3 cut(s) | 188, 556, 1094 |
| Tsp45I | GTSAC | 6 cut(s) | 212, 217, 298, 678, 956, 1206 |
| TspDTI | ATGAA | 6 cut(s) | 309, 722, 933, 990, 1361, 1442 |
| TspRI | CASTG | 5 cut(s) | 51, 469, 1267, 1340, 1510 |
| XapI | RAATTY | 2 cut(s) | 920, 1429 |
| XceI | RCATGY | 2 cut(s) | 784, 1036 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1210 |
| XmiI | GTMKAC | 1 cut(s) | 869 |
| XspI | CTAG | 6 cut(s) | 618, 651, 1010, 1172, 1325, 1540 |