RLG00000009421

U-box domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
52627557 .. 52632212
4656 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009421

Sequence Viewer

Length: 1929 bp
ATGAGAAGAGAGAAAGCAGAAGACAGTACCATAGAGGCAGTGGCGGTCGCAATCAACAAGGACAGAGGAAGTCACCATGCTTTCAAATGGACAGTTAAAAATCTCCTCACCAAAGGCCAATCTCTTACACTTGTTCATGTTAAACAAATAGCATCTGCGAATTCCACACAATTCAACAAAAACCAATTTTATGCTAAGATCAAGGAATTGTTTCTTCCATTCCGCTGGTTTTGCGTAAAAAGAGCTATAAAATGCAGTGAAGTTGTAATTGAGAACCCTGATGTACCAAAAGCACTGATTAACTATGTTTCCGCTAATTTAATTGACATTTTGGCACTTGGGGCACCATTGACAAGATACGGCCCTCTGCAGTTCAGAAGTACAAATGTTTCAAGCAGAGTGTCAAAAGCAGCACCAGAGTTCTGCACCGTGTATGTTGTCAGAAAAGGAAAGACACAGTATCTAGCCAATAGCCATCTAGATAACATTGAAATCAAGTCACCATTCACAAGAGGAAACGCTTCAATGAACAAATCATATGAACTCTCGACAGAAATTGATATATCATTTGTCAGTAGTGGAAGGCCAAGCACAGACTGCATGTTTCCTGCTTTCTCTGAGAGTCCAGAATCAGGACCTCGACATTCAATCAGTTCATATATGGACTACAGAAGTCCATCTTATGCAGGAGGCAAGTTTATTGACATGAGCTCTTCACAATGTGAAGTCTCATCATCCTCAATTAAAAGTGGAAATTCATGGTTATCACAGAATATGGATGAAATGGAAGCTGAGATGAGGAGGCTCAAGCTAGAGCTTAAGCGAACAATGGACATGTACAGTACGGCCTGCAAATTAGAAGAGGCACGAGAAGCTGAGGAAGCTGCATTGAAACTTGCAGGGAAGGAGAAAGCAAAATGTCAGGCAGCCATGGATGATGCAGAAGCAGCTAAAAGGATTGCAGAAAAAGAAGCACAACAAAGGAGGAATGCTGAAATGAAAGCCCTTAAAGAAGCTGAAGAGAGGATGAAAGCACTAGGAACAACAACATACGATCCCAGATACAGGAGATACACAATTGAGGAGATTGAAGTAGCAACAAATAATTTTTCACACGCTCTAGAGGTTGGGGAAGGAGGCTATGGGCCAGTATACAAAGGTGAACTAGACCACACACCGGTGGCAATAAAAGTTCTACGTTCAGATGCAGCTCAAGGATGGTACCAATTCCAGCAAGAGGTTCATATATTGAGTTGCATACGCCATCCCAACATAATTCTTCTTCTTGGAGCCTGCCCAGAGAATGGATGCCTGGTTTATGAGTACATAGATAATAGGAGCTTAGAAGACCGTCTCTTTCAGCGAGATATTGGCACAGGACTGTTGTTCCTTCATCAGACCAAGCCAGAACCACTTGTACACCAAGACCTAAAACCCGGCAACATTTTACTAGACTATAACTATGTCAGCAAGATTTGTGATCTGATTCTATCACTCAATATCATGACATCTGCCGCCAGAACCTGCTGTTATATTGATTCAGAGTATCAGCAAACTGGCATGCTTGGGATAAAATCTGATATATACTCACTTGGGGTCATGTTCCTACAACTAATAACAGCCAAACCACCTATGGGTTTGACTCATCACATGCTTGACCCTGCCGTTCCTGACTGGCCAGTTGAGGAAGCATTGAGTTTTGCAAAGCTAGCTCTACAGTGTGCTGAGATGAGGCAAAAAGATAGACCGGATCTTGGGAACGTTGTTCTACCTGAGCTTAACAGATTGAGAAAATTAGGCGAGGATAGCATGAATGGAGTTACGGTTGGTAATGGTGAAGTATCTTCAGCTAGACAAGAGGTCATATATCTATCAAACTCAGGATATGATAGCTCAAGGAGCCGTTCAAGCACATCATCCTGTCCATGA

Protein Analysis

643

Amino Acids

71.84

Weight (kDa)

6.9

Isoelectric Point (pI)

53.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 375 - 546 1e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 375 - 587 2.8e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1532
Acc65I GGTACC 1 cut(s) 1221
AccB1I GGYRCC 2 cut(s) 343, 1221
AccB7I CCANNNNNTGG 1 cut(s) 1304
AccI GTMKAC 1 cut(s) 1152
AciI CCGC 4 cut(s) 44, 223, 312, 1515
AclI AACGTT 1 cut(s) 1761
AclWI GGATC 2 cut(s) 1049, 1758
AcoI YGGCCR 1 cut(s) 1676
AcsI RAATTY 2 cut(s) 160, 754
AcuI CTGAAG 2 cut(s) 1038, 1830
AdeI CACNNNGTG 1 cut(s) 722
AfaI GTAC 8 cut(s) 28, 285, 382, 839, 844, 1223, 1325, 1419
AfiI CCNNNNNNNGG 7 cut(s) 632, 1065, 1177, 1237, 1304, 1634, 1754
AflII CTTAAG 1 cut(s) 818
AflIII ACRYGT 1 cut(s) 834
AgeI ACCGGT 1 cut(s) 1177
AgsI TTSAA 9 cut(s) 85, 175, 393, 491, 525, 648, 892, 1091, 1908
AhdI GACNNNNNGTC 1 cut(s) 1859
AjnI CCWGG 1 cut(s) 1311
AleI CACNNNNGTG 1 cut(s) 1178
Alw21I GWGCWC 1 cut(s) 713
Alw26I GTCTC 2 cut(s) 733, 1358
AlwI GGATC 2 cut(s) 1049, 1758
AlwNI CAGNNNCTG 1 cut(s) 1524
AoxI GGCC 6 cut(s) 115, 361, 584, 846, 1145, 1676
ApeKI GCWGC 5 cut(s) 410, 884, 926, 947, 1208
ApoI RAATTY 2 cut(s) 160, 754
AsiGI ACCGGT 1 cut(s) 1177
Asp700I GAANNNNTTC 2 cut(s) 210, 520
Asp718I GGTACC 1 cut(s) 1221
AspS9I GGNCC 3 cut(s) 362, 635, 1145
AsuC2I CCSGG 1 cut(s) 1437
AsuHPI GGTGA 5 cut(s) 65, 100, 492, 1172, 1847
AsuNHI GCTAGC 1 cut(s) 1708
AvaII GGWCC 1 cut(s) 635
BaeGI GKGCMC 1 cut(s) 346
BalI TGGCCA 1 cut(s) 1678
BanI GGYRCC 2 cut(s) 343, 1221
BanII GRGCYC 1 cut(s) 713
BauI CACGAG 1 cut(s) 867
BbsI GAAGAC 2 cut(s) 27, 1353
Bbv12I GWGCWC 1 cut(s) 713
BbvCI CCTCAGC 1 cut(s) 876
BbvI GCAGC 5 cut(s) 422, 871, 938, 959, 1220
BccI CCATC 4 cut(s) 483, 685, 1212, 1272
BceAI ACGGC 4 cut(s) 376, 861, 1649, 1887
BciT130I CCWGG 1 cut(s) 1313
BcnI CCSGG 1 cut(s) 1437
BcoDI GTCTC 2 cut(s) 733, 1358
BfaI CTAG 9 cut(s) 464, 479, 812, 1037, 1121, 1166, 1451, 1709, 1851
BfmI CTRYAG 3 cut(s) 368, 667, 1715
BfrI CTTAAG 1 cut(s) 818
BfuAI ACCTGC 1 cut(s) 1532
BisI GCNGC 6 cut(s) 411, 885, 927, 948, 1209, 1515
BlsI GCNGC 6 cut(s) 412, 886, 928, 949, 1210, 1516
Bme1390I CCNGG 2 cut(s) 1313, 1437
Bme18I GGWCC 1 cut(s) 635
BmeRI GACNNNNNGTC 1 cut(s) 1859
BmgT120I GGNCC 3 cut(s) 362, 635, 1145
BmiI GGNNCC 4 cut(s) 345, 1223, 1291, 1901
BmrFI CCNGG 2 cut(s) 1313, 1437
BmsI GCATC 4 cut(s) 161, 928, 1195, 1298
BmtI GCTAGC 1 cut(s) 1712
BpiI GAAGAC 2 cut(s) 27, 1353
Bpu10I CCTNAGC 2 cut(s) 876, 1773
BpuEI CTTGAG 3 cut(s) 791, 1197, 1879
BpuMI CCSGG 1 cut(s) 1437
BsaJI CCNNGG 1 cut(s) 930
BsaWI WCCGGW 2 cut(s) 1177, 1747
BsaXI ACNNNNNCTCC 2 cut(s) 1809, 1839
Bsc4I CCNNNNNNNGG 7 cut(s) 632, 1065, 1177, 1237, 1304, 1634, 1754
Bse118I RCCGGY 1 cut(s) 1177
Bse1I ACTGG 4 cut(s) 1148, 1561, 1679, 1679
BseBI CCWGG 1 cut(s) 1313
BseDI CCNNGG 1 cut(s) 930
BseGI GGATG 8 cut(s) 734, 784, 940, 1032, 1223, 1264, 1313, 1916
BseLI CCNNNNNNNGG 7 cut(s) 632, 1065, 1177, 1237, 1304, 1634, 1754
BseMII CTCAG 6 cut(s) 609, 783, 867, 1716, 1764, 1893
BseNI ACTGG 4 cut(s) 1148, 1561, 1679, 1679
BseRI GAGGAG 3 cut(s) 95, 814, 1097
BseSI GKGCMC 1 cut(s) 346
BseXI GCAGC 5 cut(s) 422, 871, 938, 959, 1220
BsgI GTGCAG 1 cut(s) 409
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 6 cut(s) 117, 363, 586, 848, 1147, 1678
BshNI GGYRCC 2 cut(s) 343, 1221
BshTI ACCGGT 1 cut(s) 1177
BsiEI CGRYCG 1 cut(s) 48
BsiHKAI GWGCWC 1 cut(s) 713
BsiSI CCGG 3 cut(s) 1178, 1437, 1748
BslI CCNNNNNNNGG 7 cut(s) 632, 1065, 1177, 1237, 1304, 1634, 1754
BsmAI GTCTC 2 cut(s) 733, 1358
BsmBI CGTCTC 1 cut(s) 1358
BsmI GAATGC 1 cut(s) 994
BsnI GGCC 6 cut(s) 117, 363, 586, 848, 1147, 1678
Bsp1286I GDGCHC 2 cut(s) 346, 713
Bsp1407I TGTACA 2 cut(s) 837, 1417
Bsp143I GATC 4 cut(s) 198, 1054, 1480, 1750
Bsp19I CCATGG 1 cut(s) 930
BspACI CCGC 4 cut(s) 44, 223, 312, 1515
BspANI GGCC 6 cut(s) 117, 363, 586, 848, 1147, 1678
BspCNI CTCAG 6 cut(s) 610, 784, 868, 1717, 1765, 1892
BspHI TCATGA 1 cut(s) 1503
BspLI GGNNCC 4 cut(s) 345, 1223, 1291, 1901
BspMAI CTGCAG 1 cut(s) 372
BspMI ACCTGC 1 cut(s) 1532
BspOI GCTAGC 1 cut(s) 1712
BspPI GGATC 2 cut(s) 1049, 1758
BspQI GCTCTTC 1 cut(s) 718
BspT107I GGYRCC 2 cut(s) 343, 1221
BspTI CTTAAG 1 cut(s) 818
BsrFI RCCGGY 1 cut(s) 1177
BsrGI TGTACA 2 cut(s) 837, 1417
BsrI ACTGG 4 cut(s) 1148, 1561, 1679, 1679
BssAI RCCGGY 1 cut(s) 1177
BssECI CCNNGG 1 cut(s) 930
BssMI GATC 4 cut(s) 198, 1054, 1480, 1750
BssNAI GTATAC 1 cut(s) 1153
BssSI CACGAG 1 cut(s) 867
BssT1I CCWWGG 1 cut(s) 930
Bst1107I GTATAC 1 cut(s) 1153
Bst2BI CACGAG 1 cut(s) 867
Bst2UI CCWGG 1 cut(s) 1313
Bst4CI ACNGT 9 cut(s) 26, 94, 430, 459, 842, 1352, 1383, 1719, 1825
Bst6I CTCTTC 3 cut(s) 718, 855, 1014
BstAFI CTTAAG 1 cut(s) 818
BstAPI GCANNNNNTGC 1 cut(s) 597
BstAUI TGTACA 2 cut(s) 837, 1417
BstC8I GCNNGC 4 cut(s) 850, 1294, 1562, 1710
BstDEI CTNAG 8 cut(s) 195, 618, 792, 876, 1342, 1725, 1773, 1879
BstDSI CCRYGG 1 cut(s) 930
BstF5I GGATG 8 cut(s) 734, 784, 940, 1032, 1223, 1264, 1313, 1916
BstKTI GATC 4 cut(s) 201, 1057, 1483, 1753
BstMAI GTCTC 2 cut(s) 733, 1358
BstMBI GATC 4 cut(s) 198, 1054, 1480, 1750
BstMCI CGRYCG 1 cut(s) 48
BstNI CCWGG 1 cut(s) 1313
BstNSI RCATGY 4 cut(s) 604, 838, 1564, 1654
BstSCI CCNGG 2 cut(s) 1311, 1435
BstSFI CTRYAG 3 cut(s) 368, 667, 1715
BstSLI GKGCMC 1 cut(s) 346
BstV1I GCAGC 5 cut(s) 422, 871, 938, 959, 1220
BstV2I GAAGAC 2 cut(s) 27, 1353
BstX2I RGATCY 1 cut(s) 1750
BstXI CCANNNNNNTGG 1 cut(s) 225
BstYI RGATCY 1 cut(s) 1750
BstZ17I GTATAC 1 cut(s) 1153
BsuRI GGCC 6 cut(s) 117, 363, 586, 848, 1147, 1678
BtgI CCRYGG 1 cut(s) 930
BtsCI GGATG 8 cut(s) 734, 784, 940, 1032, 1223, 1264, 1313, 1916
BtsI GCAGTG 2 cut(s) 45, 262
BtsIMutI CAGTG 4 cut(s) 45, 262, 293, 1724
BveI ACCTGC 1 cut(s) 1532
Cac8I GCNNGC 4 cut(s) 850, 1294, 1562, 1710
CaiI CAGNNNCTG 1 cut(s) 1524
CciI TCATGA 1 cut(s) 1503
Cfr10I RCCGGY 1 cut(s) 1177
Cfr13I GGNCC 3 cut(s) 362, 635, 1145
Csp6I GTAC 8 cut(s) 27, 284, 381, 838, 843, 1222, 1324, 1418
CspAI ACCGGT 1 cut(s) 1177
CviQI GTAC 8 cut(s) 27, 284, 381, 838, 843, 1222, 1324, 1418
DdeI CTNAG 8 cut(s) 195, 618, 792, 876, 1342, 1725, 1773, 1879
DpnI GATC 4 cut(s) 200, 1056, 1482, 1752
DpnII GATC 4 cut(s) 198, 1054, 1480, 1750
DraIII CACNNNGTG 1 cut(s) 722
DriI GACNNNNNGTC 1 cut(s) 1859
EaeI YGGCCR 1 cut(s) 1676
Eam1104I CTCTTC 3 cut(s) 718, 855, 1014
Eam1105I GACNNNNNGTC 1 cut(s) 1859
EarI CTCTTC 3 cut(s) 718, 855, 1014
Ecl136II GAGCTC 1 cut(s) 711
Eco130I CCWWGG 1 cut(s) 930
Eco24I GRGCYC 1 cut(s) 713
Eco47I GGWCC 1 cut(s) 635
Eco53kI GAGCTC 1 cut(s) 711
Eco57I CTGAAG 2 cut(s) 1038, 1830
EcoICRI GAGCTC 1 cut(s) 711
EcoO109I RGGNCCY 1 cut(s) 635
EcoRI GAATTC 1 cut(s) 160
EcoRII CCWGG 1 cut(s) 1311
EcoT14I CCWWGG 1 cut(s) 930
EcoT38I GRGCYC 1 cut(s) 713
ErhI CCWWGG 1 cut(s) 930
Esp3I CGTCTC 1 cut(s) 1358
FalI AAGNNNNNCTT 2 cut(s) 664, 696
FauNDI CATATG 1 cut(s) 538
FblI GTMKAC 1 cut(s) 1152
Fnu4HI GCNGC 6 cut(s) 411, 885, 927, 948, 1209, 1515
FokI GGATG 8 cut(s) 721, 791, 947, 1039, 1230, 1251, 1320, 1903
FriOI GRGCYC 1 cut(s) 713
Fsp4HI GCNGC 6 cut(s) 411, 885, 927, 948, 1209, 1515
FspBI CTAG 9 cut(s) 464, 479, 812, 1037, 1121, 1166, 1451, 1709, 1851
GluI GCNGC 6 cut(s) 411, 885, 927, 948, 1209, 1515
HaeIII GGCC 6 cut(s) 117, 363, 586, 848, 1147, 1678
HapII CCGG 3 cut(s) 1178, 1437, 1748
HinfI GANTC 5 cut(s) 622, 629, 1486, 1538, 1642
HpaII CCGG 3 cut(s) 1178, 1437, 1748
HphI GGTGA 5 cut(s) 65, 100, 492, 1172, 1847
Hpy166II GTNNAC 3 cut(s) 1153, 1163, 1420
Hpy188I TCNGA 8 cut(s) 377, 443, 619, 1204, 1398, 1485, 1543, 1579
Hpy188III TCNNGA 8 cut(s) 479, 547, 626, 633, 1121, 1504, 1670, 1881
Hpy8I GTNNAC 3 cut(s) 1153, 1163, 1420
HpyAV CCTTC 4 cut(s) 576, 898, 1127, 1400
HpyCH4III ACNGT 9 cut(s) 26, 94, 430, 459, 842, 1352, 1383, 1719, 1825
HpyCH4IV ACGT 2 cut(s) 1198, 1761
HpyF3I CTNAG 8 cut(s) 195, 618, 792, 876, 1342, 1725, 1773, 1879
HpySE526I ACGT 2 cut(s) 1198, 1761
KpnI GGTACC 1 cut(s) 1225
Kzo9I GATC 4 cut(s) 198, 1054, 1480, 1750
LguI GCTCTTC 1 cut(s) 718
LmnI GCTCC 3 cut(s) 1289, 1338, 1899
Lsp1109I GCAGC 5 cut(s) 422, 871, 938, 959, 1220
LweI GCATC 4 cut(s) 161, 928, 1195, 1298
MaeI CTAG 9 cut(s) 464, 479, 812, 1037, 1121, 1166, 1451, 1709, 1851
MaeII ACGT 2 cut(s) 1198, 1761
MaeIII GTNAC 3 cut(s) 71, 498, 1819
MalI GATC 4 cut(s) 200, 1056, 1482, 1752
MboI GATC 4 cut(s) 198, 1054, 1480, 1750
MfeI CAATTG 1 cut(s) 1077
MflI RGATCY 1 cut(s) 1750
MhlI GDGCHC 2 cut(s) 346, 713
MlsI TGGCCA 1 cut(s) 1678
MluNI TGGCCA 1 cut(s) 1678
MlyI GAGTC 2 cut(s) 631, 1636
Mox20I TGGCCA 1 cut(s) 1678
MroXI GAANNNNTTC 2 cut(s) 210, 520
MscI TGGCCA 1 cut(s) 1678
MseI TTAA 8 cut(s) 96, 141, 300, 320, 744, 819, 1008, 1779
MslI CAYNNNNRTG 1 cut(s) 1178
Msp20I TGGCCA 1 cut(s) 1678
MspA1I CMGCKG 1 cut(s) 225
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 3 cut(s) 1178, 1437, 1748
MspR9I CCNGG 2 cut(s) 1313, 1437
MunI CAATTG 1 cut(s) 1077
Mva1269I GAATGC 1 cut(s) 994
MvaI CCWGG 1 cut(s) 1313
NciI CCSGG 1 cut(s) 1437
NcoI CCATGG 1 cut(s) 930
NdeI CATATG 1 cut(s) 538
NdeII GATC 4 cut(s) 198, 1054, 1480, 1750
NheI GCTAGC 1 cut(s) 1708
NlaIV GGNNCC 4 cut(s) 345, 1223, 1291, 1901
NmuCI GTSAC 2 cut(s) 71, 498
NspI RCATGY 4 cut(s) 604, 838, 1564, 1654
OliI CACNNNNGTG 1 cut(s) 1178
PaeI GCATGC 1 cut(s) 1564
PagI TCATGA 1 cut(s) 1503
PciI ACATGT 1 cut(s) 834
PciSI GCTCTTC 1 cut(s) 718
PctI GAATGC 1 cut(s) 994
PdmI GAANNNNTTC 2 cut(s) 210, 520
PfeI GAWTC 3 cut(s) 629, 1486, 1538
PflMI CCANNNNNTGG 1 cut(s) 1304
PinAI ACCGGT 1 cut(s) 1177
PkrI GCNGC 6 cut(s) 412, 886, 928, 949, 1210, 1516
PleI GAGTC 2 cut(s) 630, 1636
PpsI GAGTC 2 cut(s) 630, 1636
PpuMI RGGWCCY 1 cut(s) 635
PscI ACATGT 1 cut(s) 834
Psp124BI GAGCTC 1 cut(s) 713
Psp1406I AACGTT 1 cut(s) 1761
Psp5II RGGWCCY 1 cut(s) 635
Psp6I CCWGG 1 cut(s) 1311
PspGI CCWGG 1 cut(s) 1311
PspN4I GGNNCC 4 cut(s) 345, 1223, 1291, 1901
PspPI GGNCC 3 cut(s) 362, 635, 1145
PspPPI RGGWCCY 1 cut(s) 635
PsrI GAACNNNNNNTAC 2 cut(s) 1401, 1433
PstI CTGCAG 1 cut(s) 372
PstNI CAGNNNCTG 1 cut(s) 1524
PsuI RGATCY 1 cut(s) 1750
RsaI GTAC 8 cut(s) 28, 285, 382, 839, 844, 1223, 1325, 1419
RsaNI GTAC 8 cut(s) 27, 284, 381, 838, 843, 1222, 1324, 1418
RseI CAYNNNNRTG 1 cut(s) 1178
SacI GAGCTC 1 cut(s) 713
SapI GCTCTTC 1 cut(s) 718
SaqAI TTAA 8 cut(s) 96, 141, 300, 320, 744, 819, 1008, 1779
SatI GCNGC 6 cut(s) 411, 885, 927, 948, 1209, 1515
Sau3AI GATC 4 cut(s) 198, 1054, 1480, 1750
Sau96I GGNCC 3 cut(s) 362, 635, 1145
SchI GAGTC 2 cut(s) 631, 1636
ScrFI CCNGG 2 cut(s) 1313, 1437
SduI GDGCHC 2 cut(s) 346, 713
SfaNI GCATC 4 cut(s) 161, 928, 1195, 1298
SfcI CTRYAG 3 cut(s) 368, 667, 1715
SgrAI CRCCGGYG 1 cut(s) 1177
SinI GGWCC 1 cut(s) 635
SmiMI CAYNNNNRTG 1 cut(s) 1178
SmlI CTYRAG 4 cut(s) 806, 818, 1212, 1894
SmoI CTYRAG 4 cut(s) 806, 818, 1212, 1894
SphI GCATGC 1 cut(s) 1564
SsiI CCGC 4 cut(s) 44, 223, 312, 1515
SspMI CTAG 9 cut(s) 464, 479, 812, 1037, 1121, 1166, 1451, 1709, 1851
SstI GAGCTC 1 cut(s) 713
StyD4I CCNGG 2 cut(s) 1311, 1435
StyI CCWWGG 1 cut(s) 930
TaaI ACNGT 9 cut(s) 26, 94, 430, 459, 842, 1352, 1383, 1719, 1825
TaiI ACGT 2 cut(s) 1201, 1764
TaqI TCGA 2 cut(s) 548, 640
TatI WGTACW 4 cut(s) 380, 837, 1323, 1417
TauI GCSGC 1 cut(s) 1517
TfiI GAWTC 3 cut(s) 629, 1486, 1538
Tru1I TTAA 8 cut(s) 96, 141, 300, 320, 744, 819, 1008, 1779
Tru9I TTAA 8 cut(s) 96, 141, 300, 320, 744, 819, 1008, 1779
TscAI CASTG 4 cut(s) 45, 262, 300, 1724
TseFI GTSAC 2 cut(s) 71, 498
TseI GCWGC 5 cut(s) 410, 884, 926, 947, 1208
Tsp45I GTSAC 2 cut(s) 71, 498
TspRI CASTG 4 cut(s) 45, 262, 300, 1724
Van91I CCANNNNNTGG 1 cut(s) 1304
Vha464I CTTAAG 1 cut(s) 818
VpaK11BI GGWCC 1 cut(s) 635
XapI RAATTY 2 cut(s) 160, 754
XbaI TCTAGA 2 cut(s) 478, 1120
XceI RCATGY 4 cut(s) 604, 838, 1564, 1654
XcmI CCANNNNNNNNNTGG 2 cut(s) 37, 1630
XmiI GTMKAC 1 cut(s) 1152
XmnI GAANNNNTTC 2 cut(s) 210, 520
XspI CTAG 9 cut(s) 464, 479, 812, 1037, 1121, 1166, 1451, 1709, 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.