Rh2BG380100

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000353
Physical Location & Seq
Forward (+)
53711157 .. 53714475
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG380100.1

Sequence Viewer

Length: 1812 bp
ATGCAGCACCAACCCTGCAAAGTTTCTGAATCAAATGATACACGAACGATGAGCTACCGGCAAGCTAGAGAATCAGAGAGCACACGTTACCACCCCCCTAGCAAGCCAGATGACTTTGAAATCAAGTCACCATTCACAAGAGGAAACTTGGCAATGAACAAATCATATCAGCTCTCACCAGAAACTGATATATCATACGTCGGTAGTGGCAAGCCAAACATGGATAACATGTTTCCCTCTTTGTATGATGGTTTAGAATCAGGAATTAGCGCTCAATATTCAACCAACTCAGAGTGGGAGAACAGAAGCTCCACGTCGACATCTTACTCAGGAACAAAGTTTATCGACATAAGCTCAGCACAAAATGAATTTTCCTCAGCTTCAATTGAAAGTCGAAAGTCCTGTCACTCACAGAATGTGGATGAAGAAATGGAGGCTGAGATGAGGAAGCTGAGGCTAGAGCTCAAGCAAACAATGGACATGTACAATACCGTCTGCAAGGAGGCGCTCTCTCTCCAGAGCACAAGTTCATATGGCAAAACTACTCGAGTATACCTTCTCATTATGTATCAATGCCAGGACATGGAACTTAACCAATGGAAATTGGAAGAAAAAAAAAGATTAGAAGAGGCACAACTAGCTGAGGAAGTTGCATTGGCACTTGTACAGAGAGAAAAAGCGAATCGTAAGGCAGCCATTGAGGCAGCAGAAGCAGCTCAAAGGATTGCTGAATGGGAATCACAAAAAAGGAGGAATACAGAACAGAAAGCCCTTAAAGAAGCTAAAGAGAGAAAGAAGGCATCAGAAGCAAGGGCCTGTGATATCAGTTATAGAAAATACACAATTGAGGAAATTGAATCAGCAACAAATAATTTTTCGATATCTTGCAAGATTGGAGAAGGAGGCTATGGTCCAGTTTACAAAGGGGAACCGGACCACACACCAGTGGCGATAAAAGCTCTGCGTCCAGATGCAGCTCAAGGACAGTCGCAATTCCAGCAAGAGGTTAAACTATTGAGTGGCATGCGACATCCTAACATGGTTCTCCTTCTTGGAGCCTGTCCAGATTATGGTTGCCTGGTTTATGAGTACATGGCTAATGGGAGCTTAGAAGATCGCATCTTCAAGCGAGGTAACACCCCAGTTATTCCTTGGAAACTAAGGTTCAGAATCGCTGCTGAAATCTGCACTGGGCTTTTGTTTCTTCATCAAACCAAGCCAGAGCCCCTAGTACACCGTGACCTCAAACCCGCTAACATTTTGCTAGACCATAACTATGTTAGCAAGATTAGTGATGTAGGTTTGGCCAGACTTGTCCCTTCATCAGTAGCTGATTCTATCACTCAGTATCACATTACATCAGCAGCCGGAACATTCTGTTATATTGATCCAGAGTATCAGCAAACTGGTATGCTGGGAAGAAAATCTGATGTTTACTCACTAGGGGTTATGCTTTTACAACTAATCACAGCCAAGTCACCAATGGGTTTGACTTATCATGTTGAGAAAGCTATTAAGGAAGGGACTTTCACTGAGACGCTTGACCCTGCTGTTCCTGACTGGCCAGTTGAGGAAACCTTAGAGTTTGCCAAGCTAGCTTTACAGTGTGCTCAAATGAAACGAAAAGACAGACCGGATCTTGGGAAGGTTGTGCTACCTGAGTTTAACAGATTGAGAGCATTTGCCCAAGATAGCATGAATTCTGTCATGCCGGGTGGTGCTAAAGAACTCTTATCAAGACAAGACCCGATTTCCACAAGACAAGATGTGATCAGTGATCCCAATCTACCGCATTCTGGATTTGATAGCTAG

Protein Analysis

603

Amino Acids

67.89

Weight (kDa)

6.1

Isoelectric Point (pI)

47.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 294 - 550 8.3e-39 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 295 - 547 8.5e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 583, 1070
AccI GTMKAC 2 cut(s) 317, 552
AciI CCGC 2 cut(s) 1251, 1790
AclWI GGATC 3 cut(s) 1382, 1644, 1772
AcoI YGGCCR 2 cut(s) 1305, 1562
AcsI RAATTY 2 cut(s) 368, 1699
AfaI GTAC 4 cut(s) 485, 666, 1091, 1233
AfeI AGCGCT 1 cut(s) 271
AfiI CCNNNNNNNGG 5 cut(s) 583, 1003, 1070, 1640, 1796
AflIII ACRYGT 3 cut(s) 83, 228, 480
AgsI TTSAA 6 cut(s) 119, 282, 384, 389, 857, 1126
AjiI CACGTC 1 cut(s) 315
AjnI CCWGG 2 cut(s) 576, 1077
AleI CACNNNNGTG 1 cut(s) 944
AloI GAACNNNNNNTCC 2 cut(s) 293, 325
Alw21I GWGCWC 4 cut(s) 83, 465, 524, 1612
Alw26I GTCTC 1 cut(s) 1529
AlwI GGATC 3 cut(s) 1382, 1644, 1772
AlwNI CAGNNNCTG 2 cut(s) 185, 1331
Ama87I CYCGRG 1 cut(s) 546
Aor51HI AGCGCT 1 cut(s) 271
AoxI GGCC 3 cut(s) 813, 1305, 1562
ApeKI GCWGC 7 cut(s) 4, 692, 704, 713, 974, 1175, 1364
ApoI RAATTY 2 cut(s) 368, 1699
ArsI GACNNNNNNTTYG 2 cut(s) 388, 420
AspLEI GCGC 2 cut(s) 272, 508
AspS9I GGNCC 3 cut(s) 813, 911, 934
AsuC2I CCSGG 1 cut(s) 1713
AsuHPI GGTGA 3 cut(s) 120, 168, 1470
AsuNHI GCTAGC 1 cut(s) 1594
AvaI CYCGRG 1 cut(s) 546
AvaII GGWCC 2 cut(s) 911, 934
BalI TGGCCA 2 cut(s) 1307, 1564
BanII GRGCYC 2 cut(s) 465, 1227
Bbv12I GWGCWC 4 cut(s) 83, 465, 524, 1612
BbvCI CCTCAGC 3 cut(s) 376, 452, 642
BbvI GCAGC 7 cut(s) 16, 704, 716, 725, 986, 1162, 1376
BccI CCATC 1 cut(s) 242
BciT130I CCWGG 2 cut(s) 578, 1079
BclI TGATCA 1 cut(s) 1770
BcnI CCSGG 1 cut(s) 1713
BcoDI GTCTC 1 cut(s) 1529
BfaI CTAG 9 cut(s) 66, 99, 458, 638, 1229, 1265, 1442, 1595, 1810
BfoI RGCGCY 2 cut(s) 273, 509
BglI GCCNNNNNGGC 1 cut(s) 701
BisI GCNGC 7 cut(s) 5, 693, 705, 714, 975, 1176, 1365
BlpI GCTNAGC 1 cut(s) 355
BlsI GCNGC 7 cut(s) 6, 694, 706, 715, 976, 1177, 1366
Bme1390I CCNGG 3 cut(s) 578, 1079, 1713
Bme18I GGWCC 2 cut(s) 911, 934
BmeT110I CYCGRG 1 cut(s) 546
BmgBI CACGTC 1 cut(s) 315
BmgT120I GGNCC 3 cut(s) 813, 911, 934
BmiI GGNNCC 2 cut(s) 930, 1057
BmrFI CCNGG 3 cut(s) 578, 1079, 1713
BmrI ACTGGG 2 cut(s) 1136, 1200
BmsI GCATC 3 cut(s) 809, 961, 1128
BmtI GCTAGC 1 cut(s) 1598
BmuI ACTGGG 2 cut(s) 1136, 1200
BplI GAGNNNNNCTC 2 cut(s) 494, 526
BpmI CTGGAG 1 cut(s) 500
Bpu10I CCTNAGC 3 cut(s) 376, 452, 642
Bpu1102I GCTNAGC 1 cut(s) 355
BpuEI CTTGAG 2 cut(s) 449, 963
BpuMI CCSGG 1 cut(s) 1713
BsaBI GATNNNNATC 1 cut(s) 1782
BsaJI CCNNGG 1 cut(s) 1151
BsaWI WCCGGW 2 cut(s) 931, 1633
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 5 cut(s) 583, 1003, 1070, 1640, 1796
Bse118I RCCGGY 1 cut(s) 57
Bse1I ACTGG 7 cut(s) 914, 944, 1142, 1195, 1411, 1565, 1565
Bse3DI GCAATG 1 cut(s) 159
Bse8I GATNNNNATC 1 cut(s) 1782
BseBI CCWGG 2 cut(s) 578, 1079
BseDI CCNNGG 1 cut(s) 1151
BseGI GGATG 2 cut(s) 427, 1030
BseJI GATNNNNATC 1 cut(s) 1782
BseLI CCNNNNNNNGG 5 cut(s) 583, 1003, 1070, 1640, 1796
BseMI GCAATG 1 cut(s) 159
BseNI ACTGG 7 cut(s) 914, 944, 1142, 1195, 1411, 1565, 1565
BseXI GCAGC 7 cut(s) 16, 704, 716, 725, 986, 1162, 1376
BseYI CCCAGC 1 cut(s) 1414
BsgI GTGCAG 1 cut(s) 1171
BshFI GGCC 3 cut(s) 815, 1307, 1564
BsiHKAI GWGCWC 4 cut(s) 83, 465, 524, 1612
BsiHKCI CYCGRG 1 cut(s) 546
BsiSI CCGG 5 cut(s) 58, 932, 1368, 1634, 1712
BslFI GGGAC 2 cut(s) 1301, 1537
BslI CCNNNNNNNGG 5 cut(s) 583, 1003, 1070, 1640, 1796
BsmAI GTCTC 1 cut(s) 1529
BsmBI CGTCTC 1 cut(s) 1529
BsmFI GGGAC 2 cut(s) 1301, 1537
BsmI GAATGC 1 cut(s) 1792
BsnI GGCC 3 cut(s) 815, 1307, 1564
BsoBI CYCGRG 1 cut(s) 546
Bsp1286I GDGCHC 5 cut(s) 83, 465, 524, 1227, 1612
Bsp1407I TGTACA 2 cut(s) 483, 664
Bsp143I GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
Bsp1720I GCTNAGC 1 cut(s) 355
BspACI CCGC 2 cut(s) 1251, 1790
BspANI GGCC 3 cut(s) 815, 1307, 1564
BspLI GGNNCC 2 cut(s) 930, 1057
BspOI GCTAGC 1 cut(s) 1598
BspPI GGATC 3 cut(s) 1382, 1644, 1772
BsrDI GCAATG 1 cut(s) 159
BsrFI RCCGGY 1 cut(s) 57
BsrGI TGTACA 2 cut(s) 483, 664
BsrI ACTGG 7 cut(s) 914, 944, 1142, 1195, 1411, 1565, 1565
BssAI RCCGGY 1 cut(s) 57
BssECI CCNNGG 1 cut(s) 1151
BssMI GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
BssNAI GTATAC 1 cut(s) 553
BssT1I CCWWGG 1 cut(s) 1151
Bst1107I GTATAC 1 cut(s) 553
Bst2UI CCWGG 2 cut(s) 578, 1079
Bst4CI ACNGT 4 cut(s) 493, 987, 1238, 1605
Bst6I CTCTTC 1 cut(s) 621
BstAUI TGTACA 2 cut(s) 483, 664
BstC8I GCNNGC 5 cut(s) 63, 104, 212, 1025, 1596
BstF5I GGATG 2 cut(s) 427, 1030
BstH2I RGCGCY 2 cut(s) 273, 509
BstHHI GCGC 2 cut(s) 272, 508
BstKTI GATC 5 cut(s) 1117, 1390, 1639, 1773, 1780
BstMAI GTCTC 1 cut(s) 1529
BstMBI GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
BstMWI GCNNNNNNNGC 8 cut(s) 638, 701, 710, 713, 806, 956, 997, 1595
BstNI CCWGG 2 cut(s) 578, 1079
BstNSI RCATGY 3 cut(s) 232, 484, 1027
BstSCI CCNGG 3 cut(s) 576, 1077, 1711
BstV1I GCAGC 7 cut(s) 16, 704, 716, 725, 986, 1162, 1376
BstX2I RGATCY 1 cut(s) 1636
BstYI RGATCY 1 cut(s) 1636
BstZ17I GTATAC 1 cut(s) 553
BsuRI GGCC 3 cut(s) 815, 1307, 1564
BtrI CACGTC 1 cut(s) 315
BtsCI GGATG 2 cut(s) 427, 1030
BtsIMutI CAGTG 5 cut(s) 951, 1188, 1530, 1610, 1780
Cac8I GCNNGC 5 cut(s) 63, 104, 212, 1025, 1596
CaiI CAGNNNCTG 2 cut(s) 185, 1331
CfoI GCGC 2 cut(s) 272, 508
Cfr10I RCCGGY 1 cut(s) 57
Cfr13I GGNCC 3 cut(s) 813, 911, 934
CseI GACGC 2 cut(s) 953, 1546
Csp6I GTAC 4 cut(s) 484, 665, 1090, 1232
CviQI GTAC 4 cut(s) 484, 665, 1090, 1232
DpnI GATC 5 cut(s) 1116, 1389, 1638, 1772, 1779
DpnII GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
EaeI YGGCCR 2 cut(s) 1305, 1562
Eam1104I CTCTTC 1 cut(s) 621
EarI CTCTTC 1 cut(s) 621
Ecl136II GAGCTC 1 cut(s) 463
Eco130I CCWWGG 1 cut(s) 1151
Eco24I GRGCYC 2 cut(s) 465, 1227
Eco32I GATATC 2 cut(s) 823, 882
Eco47I GGWCC 2 cut(s) 911, 934
Eco47III AGCGCT 1 cut(s) 271
Eco53kI GAGCTC 1 cut(s) 463
Eco88I CYCGRG 1 cut(s) 546
EcoICRI GAGCTC 1 cut(s) 463
EcoO109I RGGNCCY 1 cut(s) 813
EcoRI GAATTC 1 cut(s) 1699
EcoRII CCWGG 2 cut(s) 576, 1077
EcoRV GATATC 2 cut(s) 823, 882
EcoT14I CCWWGG 1 cut(s) 1151
EcoT38I GRGCYC 2 cut(s) 465, 1227
ErhI CCWWGG 1 cut(s) 1151
Esp3I CGTCTC 1 cut(s) 1529
FaqI GGGAC 2 cut(s) 1301, 1537
FauI CCCGC 1 cut(s) 1258
FauNDI CATATG 1 cut(s) 532
FbaI TGATCA 1 cut(s) 1770
FblI GTMKAC 2 cut(s) 317, 552
Fnu4HI GCNGC 7 cut(s) 5, 693, 705, 714, 975, 1176, 1365
FokI GGATG 2 cut(s) 434, 1017
FriOI GRGCYC 2 cut(s) 465, 1227
Fsp4HI GCNGC 7 cut(s) 5, 693, 705, 714, 975, 1176, 1365
FspBI CTAG 9 cut(s) 66, 99, 458, 638, 1229, 1265, 1442, 1595, 1810
GlaI GCGC 2 cut(s) 271, 507
GluI GCNGC 7 cut(s) 5, 693, 705, 714, 975, 1176, 1365
GsaI CCCAGC 1 cut(s) 1418
GsuI CTGGAG 1 cut(s) 500
HaeII RGCGCY 2 cut(s) 273, 509
HaeIII GGCC 3 cut(s) 815, 1307, 1564
HapII CCGG 5 cut(s) 58, 932, 1368, 1634, 1712
HgaI GACGC 2 cut(s) 953, 1546
HhaI GCGC 2 cut(s) 272, 508
Hin6I GCGC 2 cut(s) 270, 506
HinP1I GCGC 2 cut(s) 270, 506
HincII GTYRAC 1 cut(s) 318
HindII GTYRAC 1 cut(s) 318
HinfI GANTC 8 cut(s) 29, 71, 257, 682, 737, 857, 1170, 1334
HpaII CCGG 5 cut(s) 58, 932, 1368, 1634, 1712
HphI GGTGA 3 cut(s) 120, 168, 1470
Hpy166II GTNNAC 5 cut(s) 318, 553, 919, 1234, 1435
Hpy188I TCNGA 6 cut(s) 28, 76, 292, 805, 1169, 1429
Hpy188III TCNNGA 9 cut(s) 261, 330, 517, 968, 1064, 1391, 1556, 1737, 1797
Hpy8I GTNNAC 5 cut(s) 318, 553, 919, 1234, 1435
Hpy99I CGWCG 2 cut(s) 203, 319
HpyAV CCTTC 7 cut(s) 566, 790, 893, 1058, 1329, 1514, 1639
HpyCH4III ACNGT 4 cut(s) 493, 987, 1238, 1605
HpyCH4IV ACGT 3 cut(s) 85, 198, 314
HpyCH4V TGCA 7 cut(s) 4, 18, 498, 653, 888, 974, 1188
HpyF10VI GCNNNNNNNGC 8 cut(s) 638, 701, 710, 713, 806, 956, 997, 1595
HpySE526I ACGT 3 cut(s) 85, 198, 314
HspAI GCGC 2 cut(s) 270, 506
Ksp22I TGATCA 1 cut(s) 1770
Kzo9I GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
LmnI GCTCC 3 cut(s) 314, 1055, 1104
Lsp1109I GCAGC 7 cut(s) 16, 704, 716, 725, 986, 1162, 1376
LweI GCATC 3 cut(s) 809, 961, 1128
MaeI CTAG 9 cut(s) 66, 99, 458, 638, 1229, 1265, 1442, 1595, 1810
MaeII ACGT 3 cut(s) 85, 198, 314
MaeIII GTNAC 6 cut(s) 86, 126, 404, 1133, 1238, 1476
MalI GATC 5 cut(s) 1116, 1389, 1638, 1772, 1779
MboI GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
MboII GAAGA 7 cut(s) 437, 620, 638, 1114, 1124, 1196, 1431
MfeI CAATTG 2 cut(s) 384, 843
MflI RGATCY 1 cut(s) 1636
MhlI GDGCHC 5 cut(s) 83, 465, 524, 1227, 1612
MlsI TGGCCA 2 cut(s) 1307, 1564
MluCI AATT 9 cut(s) 264, 368, 384, 602, 843, 852, 871, 992, 1699
MluNI TGGCCA 2 cut(s) 1307, 1564
Mox20I TGGCCA 2 cut(s) 1307, 1564
MscI TGGCCA 2 cut(s) 1307, 1564
MseI TTAA 5 cut(s) 591, 774, 1008, 1515, 1665
MslI CAYNNNNRTG 2 cut(s) 944, 1275
Msp20I TGGCCA 2 cut(s) 1307, 1564
MspI CCGG 5 cut(s) 58, 932, 1368, 1634, 1712
MspR9I CCNGG 3 cut(s) 578, 1079, 1713
MunI CAATTG 2 cut(s) 384, 843
Mva1269I GAATGC 1 cut(s) 1792
MvaI CCWGG 2 cut(s) 578, 1079
MwoI GCNNNNNNNGC 8 cut(s) 638, 701, 710, 713, 806, 956, 997, 1595
NciI CCSGG 1 cut(s) 1713
NdeI CATATG 1 cut(s) 532
NdeII GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
NheI GCTAGC 1 cut(s) 1594
NlaIV GGNNCC 2 cut(s) 930, 1057
NmuCI GTSAC 4 cut(s) 126, 404, 1238, 1476
NspI RCATGY 3 cut(s) 232, 484, 1027
OliI CACNNNNGTG 1 cut(s) 944
PaeI GCATGC 1 cut(s) 1027
PaeR7I CTCGAG 1 cut(s) 546
PciI ACATGT 2 cut(s) 228, 480
PctI GAATGC 1 cut(s) 1792
PfeI GAWTC 8 cut(s) 29, 71, 257, 682, 737, 857, 1170, 1334
PflMI CCANNNNNTGG 2 cut(s) 583, 1070
PkrI GCNGC 7 cut(s) 6, 694, 706, 715, 976, 1177, 1366
PscI ACATGT 2 cut(s) 228, 480
Psp124BI GAGCTC 1 cut(s) 465
Psp6I CCWGG 2 cut(s) 576, 1077
PspFI CCCAGC 1 cut(s) 1414
PspGI CCWGG 2 cut(s) 576, 1077
PspN4I GGNNCC 2 cut(s) 930, 1057
PspPI GGNCC 3 cut(s) 813, 911, 934
PspXI VCTCGAGB 1 cut(s) 546
PstNI CAGNNNCTG 2 cut(s) 185, 1331
PsuI RGATCY 1 cut(s) 1636
RsaI GTAC 4 cut(s) 485, 666, 1091, 1233
RsaNI GTAC 4 cut(s) 484, 665, 1090, 1232
RseI CAYNNNNRTG 2 cut(s) 944, 1275
SacI GAGCTC 1 cut(s) 465
SalI GTCGAC 1 cut(s) 316
SaqAI TTAA 5 cut(s) 591, 774, 1008, 1515, 1665
SatI GCNGC 7 cut(s) 5, 693, 705, 714, 975, 1176, 1365
Sau3AI GATC 5 cut(s) 1114, 1387, 1636, 1770, 1777
Sau96I GGNCC 3 cut(s) 813, 911, 934
ScrFI CCNGG 3 cut(s) 578, 1079, 1713
SduI GDGCHC 5 cut(s) 83, 465, 524, 1227, 1612
SfaNI GCATC 3 cut(s) 809, 961, 1128
Sfr274I CTCGAG 1 cut(s) 546
SinI GGWCC 2 cut(s) 911, 934
SlaI CTCGAG 1 cut(s) 546
SmiMI CAYNNNNRTG 2 cut(s) 944, 1275
SmlI CTYRAG 3 cut(s) 464, 546, 978
SmoI CTYRAG 3 cut(s) 464, 546, 978
SphI GCATGC 1 cut(s) 1027
Sse9I AATT 9 cut(s) 264, 368, 384, 602, 843, 852, 871, 992, 1699
SsiI CCGC 2 cut(s) 1251, 1790
SspI AATATT 1 cut(s) 278
SspMI CTAG 9 cut(s) 66, 99, 458, 638, 1229, 1265, 1442, 1595, 1810
SstI GAGCTC 1 cut(s) 465
StyD4I CCNGG 3 cut(s) 576, 1077, 1711
StyI CCWWGG 1 cut(s) 1151
TaaI ACNGT 4 cut(s) 493, 987, 1238, 1605
TaiI ACGT 3 cut(s) 88, 201, 317
TaqI TCGA 5 cut(s) 317, 345, 394, 547, 878
TasI AATT 9 cut(s) 264, 368, 384, 602, 843, 852, 871, 992, 1699
TatI WGTACW 4 cut(s) 483, 664, 1089, 1231
TfiI GAWTC 8 cut(s) 29, 71, 257, 682, 737, 857, 1170, 1334
Tru1I TTAA 5 cut(s) 591, 774, 1008, 1515, 1665
Tru9I TTAA 5 cut(s) 591, 774, 1008, 1515, 1665
TscAI CASTG 5 cut(s) 951, 1195, 1537, 1610, 1780
TseFI GTSAC 4 cut(s) 126, 404, 1238, 1476
TseI GCWGC 7 cut(s) 4, 692, 704, 713, 974, 1175, 1364
Tsp45I GTSAC 4 cut(s) 126, 404, 1238, 1476
TspDTI ATGAA 8 cut(s) 170, 381, 438, 519, 1196, 1311, 1631, 1712
TspRI CASTG 5 cut(s) 951, 1195, 1537, 1610, 1780
Van91I CCANNNNNTGG 2 cut(s) 583, 1070
VpaK11BI GGWCC 2 cut(s) 911, 934
XapI RAATTY 2 cut(s) 368, 1699
XceI RCATGY 3 cut(s) 232, 484, 1027
XcmI CCANNNNNNNNNTGG 2 cut(s) 1149, 1480
XhoI CTCGAG 1 cut(s) 546
XmiI GTMKAC 2 cut(s) 317, 552
XspI CTAG 9 cut(s) 66, 99, 458, 638, 1229, 1265, 1442, 1595, 1810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.