U-box domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1151 |
| AccI | GTMKAC | 1 cut(s) | 452 |
| AciI | CCGC | 3 cut(s) | 163, 1332, 1757 |
| AclWI | GGATC | 5 cut(s) | 20, 32, 1463, 1611, 1739 |
| AcoI | YGGCCR | 2 cut(s) | 1386, 1529 |
| AcsI | RAATTY | 2 cut(s) | 503, 1666 |
| AcuI | CTGAAG | 1 cut(s) | 181 |
| AfaI | GTAC | 4 cut(s) | 620, 747, 1172, 1314 |
| AfeI | AGCGCT | 1 cut(s) | 406 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 201, 1084, 1151, 1607, 1763 |
| AflIII | ACRYGT | 2 cut(s) | 363, 615 |
| AgsI | TTSAA | 6 cut(s) | 80, 417, 519, 524, 938, 1207 |
| AjiI | CACGTC | 1 cut(s) | 450 |
| AjnI | CCWGG | 1 cut(s) | 1158 |
| AleI | CACNNNNGTG | 1 cut(s) | 1025 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 428, 460 |
| Alw21I | GWGCWC | 3 cut(s) | 600, 657, 1579 |
| Alw26I | GTCTC | 2 cut(s) | 148, 1496 |
| AlwI | GGATC | 5 cut(s) | 20, 32, 1463, 1611, 1739 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 320, 1412 |
| Aor51HI | AGCGCT | 1 cut(s) | 406 |
| AoxI | GGCC | 3 cut(s) | 894, 1386, 1529 |
| ApeKI | GCWGC | 6 cut(s) | 773, 785, 794, 1055, 1256, 1445 |
| ApoI | RAATTY | 2 cut(s) | 503, 1666 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 523, 555 |
| AspLEI | GCGC | 1 cut(s) | 407 |
| AspS9I | GGNCC | 3 cut(s) | 894, 992, 1015 |
| AsuC2I | CCSGG | 1 cut(s) | 1680 |
| AsuHPI | GGTGA | 3 cut(s) | 188, 255, 303 |
| AsuNHI | GCTAGC | 1 cut(s) | 1561 |
| AvaII | GGWCC | 2 cut(s) | 992, 1015 |
| BalI | TGGCCA | 2 cut(s) | 1388, 1531 |
| BanII | GRGCYC | 2 cut(s) | 600, 1308 |
| Bbv12I | GWGCWC | 3 cut(s) | 600, 657, 1579 |
| BbvCI | CCTCAGC | 3 cut(s) | 511, 587, 723 |
| BbvI | GCAGC | 6 cut(s) | 785, 797, 806, 1067, 1243, 1457 |
| BccI | CCATC | 1 cut(s) | 377 |
| BciT130I | CCWGG | 1 cut(s) | 1160 |
| BclI | TGATCA | 1 cut(s) | 1737 |
| BcnI | CCSGG | 1 cut(s) | 1680 |
| BcoDI | GTCTC | 2 cut(s) | 148, 1496 |
| BfaI | CTAG | 6 cut(s) | 593, 719, 1310, 1346, 1562, 1777 |
| BfoI | RGCGCY | 1 cut(s) | 408 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 782 |
| BisI | GCNGC | 6 cut(s) | 774, 786, 795, 1056, 1257, 1446 |
| BlpI | GCTNAGC | 1 cut(s) | 490 |
| BlsI | GCNGC | 6 cut(s) | 775, 787, 796, 1057, 1258, 1447 |
| Bme1390I | CCNGG | 2 cut(s) | 1160, 1680 |
| Bme18I | GGWCC | 2 cut(s) | 992, 1015 |
| BmgBI | CACGTC | 1 cut(s) | 450 |
| BmgT120I | GGNCC | 3 cut(s) | 894, 992, 1015 |
| BmiI | GGNNCC | 3 cut(s) | 131, 192, 1138 |
| BmrFI | CCNGG | 2 cut(s) | 1160, 1680 |
| BmrI | ACTGGG | 3 cut(s) | 1217, 1281, 1497 |
| BmsI | GCATC | 4 cut(s) | 890, 1042, 1054, 1209 |
| BmtI | GCTAGC | 1 cut(s) | 1565 |
| BmuI | ACTGGG | 3 cut(s) | 1217, 1281, 1497 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 629, 661 |
| BpmI | CTGGAG | 1 cut(s) | 633 |
| Bpu10I | CCTNAGC | 3 cut(s) | 511, 587, 723 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 490 |
| BpuEI | CTTGAG | 2 cut(s) | 584, 1044 |
| BpuMI | CCSGG | 1 cut(s) | 1680 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1749 |
| BsaJI | CCNNGG | 1 cut(s) | 1232 |
| BsaWI | WCCGGW | 1 cut(s) | 1600 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 428, 458 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 201, 1084, 1151, 1607, 1763 |
| Bse1I | ACTGG | 9 cut(s) | 247, 995, 1017, 1025, 1223, 1276, 1492, 1532, 1532 |
| Bse3DI | GCAATG | 1 cut(s) | 294 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1749 |
| BseBI | CCWGG | 1 cut(s) | 1160 |
| BseDI | CCNNGG | 1 cut(s) | 1232 |
| BseGI | GGATG | 3 cut(s) | 562, 1045, 1111 |
| BseJI | GATNNNNATC | 1 cut(s) | 1749 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 201, 1084, 1151, 1607, 1763 |
| BseMI | GCAATG | 1 cut(s) | 294 |
| BseNI | ACTGG | 9 cut(s) | 247, 995, 1017, 1025, 1223, 1276, 1492, 1532, 1532 |
| BseXI | GCAGC | 6 cut(s) | 785, 797, 806, 1067, 1243, 1457 |
| BsgI | GTGCAG | 1 cut(s) | 1252 |
| BshFI | GGCC | 3 cut(s) | 896, 1388, 1531 |
| BsiHKAI | GWGCWC | 3 cut(s) | 600, 657, 1579 |
| BsiSI | CCGG | 3 cut(s) | 1449, 1601, 1679 |
| BslFI | GGGAC | 2 cut(s) | 1382, 1504 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 201, 1084, 1151, 1607, 1763 |
| BsmAI | GTCTC | 2 cut(s) | 148, 1496 |
| BsmBI | CGTCTC | 1 cut(s) | 1496 |
| BsmFI | GGGAC | 2 cut(s) | 1382, 1504 |
| BsmI | GAATGC | 1 cut(s) | 1759 |
| BsnI | GGCC | 3 cut(s) | 896, 1388, 1531 |
| Bsp1286I | GDGCHC | 4 cut(s) | 600, 657, 1308, 1579 |
| Bsp1407I | TGTACA | 2 cut(s) | 618, 745 |
| Bsp143I | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 490 |
| BspACI | CCGC | 3 cut(s) | 163, 1332, 1757 |
| BspANI | GGCC | 3 cut(s) | 896, 1388, 1531 |
| BspLI | GGNNCC | 3 cut(s) | 131, 192, 1138 |
| BspOI | GCTAGC | 1 cut(s) | 1565 |
| BspPI | GGATC | 5 cut(s) | 20, 32, 1463, 1611, 1739 |
| BsrDI | GCAATG | 1 cut(s) | 294 |
| BsrGI | TGTACA | 2 cut(s) | 618, 745 |
| BsrI | ACTGG | 9 cut(s) | 247, 995, 1017, 1025, 1223, 1276, 1492, 1532, 1532 |
| BssECI | CCNNGG | 1 cut(s) | 1232 |
| BssMI | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| BssT1I | CCWWGG | 1 cut(s) | 1232 |
| Bst2UI | CCWGG | 1 cut(s) | 1160 |
| Bst4CI | ACNGT | 4 cut(s) | 628, 1068, 1319, 1572 |
| Bst6I | CTCTTC | 1 cut(s) | 702 |
| BstAUI | TGTACA | 2 cut(s) | 618, 745 |
| BstC8I | GCNNGC | 4 cut(s) | 167, 347, 1106, 1563 |
| BstEII | GGTNACC | 1 cut(s) | 261 |
| BstF5I | GGATG | 3 cut(s) | 562, 1045, 1111 |
| BstH2I | RGCGCY | 1 cut(s) | 408 |
| BstHHI | GCGC | 1 cut(s) | 407 |
| BstKTI | GATC | 7 cut(s) | 28, 40, 1198, 1471, 1606, 1740, 1747 |
| BstMAI | GTCTC | 2 cut(s) | 148, 1496 |
| BstMBI | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 719, 782, 791, 794, 887, 1037, 1078, 1562 |
| BstNI | CCWGG | 1 cut(s) | 1160 |
| BstNSI | RCATGY | 3 cut(s) | 367, 619, 1108 |
| BstPI | GGTNACC | 1 cut(s) | 261 |
| BstSCI | CCNGG | 2 cut(s) | 1158, 1678 |
| BstV1I | GCAGC | 6 cut(s) | 785, 797, 806, 1067, 1243, 1457 |
| BstX2I | RGATCY | 2 cut(s) | 25, 1603 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 173 |
| BstYI | RGATCY | 2 cut(s) | 25, 1603 |
| BsuRI | GGCC | 3 cut(s) | 896, 1388, 1531 |
| BtrI | CACGTC | 1 cut(s) | 450 |
| BtsCI | GGATG | 3 cut(s) | 562, 1045, 1111 |
| BtsIMutI | CAGTG | 5 cut(s) | 1032, 1269, 1497, 1577, 1747 |
| Cac8I | GCNNGC | 4 cut(s) | 167, 347, 1106, 1563 |
| CaiI | CAGNNNCTG | 2 cut(s) | 320, 1412 |
| CfoI | GCGC | 1 cut(s) | 407 |
| Cfr13I | GGNCC | 3 cut(s) | 894, 992, 1015 |
| CseI | GACGC | 1 cut(s) | 1513 |
| Csp6I | GTAC | 4 cut(s) | 619, 746, 1171, 1313 |
| CviQI | GTAC | 4 cut(s) | 619, 746, 1171, 1313 |
| DpnI | GATC | 7 cut(s) | 27, 39, 1197, 1470, 1605, 1739, 1746 |
| DpnII | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| EaeI | YGGCCR | 2 cut(s) | 1386, 1529 |
| Eam1104I | CTCTTC | 1 cut(s) | 702 |
| EarI | CTCTTC | 1 cut(s) | 702 |
| EciI | GGCGGA | 1 cut(s) | 152 |
| Ecl136II | GAGCTC | 1 cut(s) | 598 |
| Eco130I | CCWWGG | 1 cut(s) | 1232 |
| Eco24I | GRGCYC | 2 cut(s) | 600, 1308 |
| Eco32I | GATATC | 2 cut(s) | 904, 963 |
| Eco47I | GGWCC | 2 cut(s) | 992, 1015 |
| Eco47III | AGCGCT | 1 cut(s) | 406 |
| Eco53kI | GAGCTC | 1 cut(s) | 598 |
| Eco57I | CTGAAG | 1 cut(s) | 181 |
| Eco91I | GGTNACC | 1 cut(s) | 261 |
| EcoICRI | GAGCTC | 1 cut(s) | 598 |
| EcoO109I | RGGNCCY | 1 cut(s) | 894 |
| EcoO65I | GGTNACC | 1 cut(s) | 261 |
| EcoRI | GAATTC | 1 cut(s) | 1666 |
| EcoRII | CCWGG | 1 cut(s) | 1158 |
| EcoRV | GATATC | 2 cut(s) | 904, 963 |
| EcoT14I | CCWWGG | 1 cut(s) | 1232 |
| EcoT38I | GRGCYC | 2 cut(s) | 600, 1308 |
| ErhI | CCWWGG | 1 cut(s) | 1232 |
| Esp3I | CGTCTC | 1 cut(s) | 1496 |
| FaqI | GGGAC | 2 cut(s) | 1382, 1504 |
| FauI | CCCGC | 1 cut(s) | 1339 |
| FbaI | TGATCA | 1 cut(s) | 1737 |
| FblI | GTMKAC | 1 cut(s) | 452 |
| Fnu4HI | GCNGC | 6 cut(s) | 774, 786, 795, 1056, 1257, 1446 |
| FokI | GGATG | 3 cut(s) | 569, 1032, 1098 |
| FriOI | GRGCYC | 2 cut(s) | 600, 1308 |
| Fsp4HI | GCNGC | 6 cut(s) | 774, 786, 795, 1056, 1257, 1446 |
| FspBI | CTAG | 6 cut(s) | 593, 719, 1310, 1346, 1562, 1777 |
| GlaI | GCGC | 1 cut(s) | 406 |
| GluI | GCNGC | 6 cut(s) | 774, 786, 795, 1056, 1257, 1446 |
| GsuI | CTGGAG | 1 cut(s) | 633 |
| HaeII | RGCGCY | 1 cut(s) | 408 |
| HaeIII | GGCC | 3 cut(s) | 896, 1388, 1531 |
| HapII | CCGG | 3 cut(s) | 1449, 1601, 1679 |
| HgaI | GACGC | 1 cut(s) | 1513 |
| HhaI | GCGC | 1 cut(s) | 407 |
| Hin6I | GCGC | 1 cut(s) | 405 |
| HinP1I | GCGC | 1 cut(s) | 405 |
| HincII | GTYRAC | 1 cut(s) | 453 |
| HindII | GTYRAC | 1 cut(s) | 453 |
| HinfI | GANTC | 6 cut(s) | 392, 763, 818, 938, 1251, 1415 |
| HpaII | CCGG | 3 cut(s) | 1449, 1601, 1679 |
| HphI | GGTGA | 3 cut(s) | 188, 255, 303 |
| Hpy166II | GTNNAC | 6 cut(s) | 69, 89, 144, 453, 1000, 1315 |
| Hpy188I | TCNGA | 6 cut(s) | 25, 125, 228, 427, 886, 1250 |
| Hpy8I | GTNNAC | 6 cut(s) | 69, 89, 144, 453, 1000, 1315 |
| Hpy99I | CGWCG | 2 cut(s) | 338, 454 |
| HpyAV | CCTTC | 8 cut(s) | 39, 120, 205, 871, 974, 1139, 1410, 1606 |
| HpyCH4III | ACNGT | 4 cut(s) | 628, 1068, 1319, 1572 |
| HpyCH4IV | ACGT | 2 cut(s) | 333, 449 |
| HpyCH4V | TGCA | 7 cut(s) | 215, 633, 734, 969, 1045, 1055, 1269 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 719, 782, 791, 794, 887, 1037, 1078, 1562 |
| HpySE526I | ACGT | 2 cut(s) | 333, 449 |
| HspAI | GCGC | 1 cut(s) | 405 |
| Ksp22I | TGATCA | 1 cut(s) | 1737 |
| Kzo9I | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| LmnI | GCTCC | 4 cut(s) | 196, 449, 1136, 1185 |
| Lsp1109I | GCAGC | 6 cut(s) | 785, 797, 806, 1067, 1243, 1457 |
| LweI | GCATC | 4 cut(s) | 890, 1042, 1054, 1209 |
| MaeI | CTAG | 6 cut(s) | 593, 719, 1310, 1346, 1562, 1777 |
| MaeII | ACGT | 2 cut(s) | 333, 449 |
| MaeIII | GTNAC | 4 cut(s) | 261, 539, 1214, 1319 |
| MalI | GATC | 7 cut(s) | 27, 39, 1197, 1470, 1605, 1739, 1746 |
| MboI | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| MboII | GAAGA | 7 cut(s) | 572, 701, 719, 1195, 1205, 1277, 1667 |
| MfeI | CAATTG | 2 cut(s) | 519, 924 |
| MflI | RGATCY | 2 cut(s) | 25, 1603 |
| MhlI | GDGCHC | 4 cut(s) | 600, 657, 1308, 1579 |
| MlsI | TGGCCA | 2 cut(s) | 1388, 1531 |
| MluCI | AATT | 9 cut(s) | 399, 503, 519, 683, 924, 933, 952, 1073, 1666 |
| MluNI | TGGCCA | 2 cut(s) | 1388, 1531 |
| MmeI | TCCRAC | 1 cut(s) | 182 |
| Mox20I | TGGCCA | 2 cut(s) | 1388, 1531 |
| MscI | TGGCCA | 2 cut(s) | 1388, 1531 |
| MseI | TTAA | 4 cut(s) | 672, 855, 1089, 1632 |
| MslI | CAYNNNNRTG | 4 cut(s) | 149, 1025, 1050, 1356 |
| Msp20I | TGGCCA | 2 cut(s) | 1388, 1531 |
| MspI | CCGG | 3 cut(s) | 1449, 1601, 1679 |
| MspR9I | CCNGG | 2 cut(s) | 1160, 1680 |
| MunI | CAATTG | 2 cut(s) | 519, 924 |
| Mva1269I | GAATGC | 1 cut(s) | 1759 |
| MvaI | CCWGG | 1 cut(s) | 1160 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 719, 782, 791, 794, 887, 1037, 1078, 1562 |
| NciI | CCSGG | 1 cut(s) | 1680 |
| NdeII | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| NheI | GCTAGC | 1 cut(s) | 1561 |
| NlaIV | GGNNCC | 3 cut(s) | 131, 192, 1138 |
| NmuCI | GTSAC | 3 cut(s) | 261, 539, 1319 |
| NspI | RCATGY | 3 cut(s) | 367, 619, 1108 |
| OliI | CACNNNNGTG | 1 cut(s) | 1025 |
| PaeI | GCATGC | 1 cut(s) | 1108 |
| PciI | ACATGT | 2 cut(s) | 363, 615 |
| PctI | GAATGC | 1 cut(s) | 1759 |
| PfeI | GAWTC | 6 cut(s) | 392, 763, 818, 938, 1251, 1415 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1151 |
| PkrI | GCNGC | 6 cut(s) | 775, 787, 796, 1057, 1258, 1447 |
| PscI | ACATGT | 2 cut(s) | 363, 615 |
| Psp124BI | GAGCTC | 1 cut(s) | 600 |
| Psp6I | CCWGG | 1 cut(s) | 1158 |
| PspEI | GGTNACC | 1 cut(s) | 261 |
| PspGI | CCWGG | 1 cut(s) | 1158 |
| PspN4I | GGNNCC | 3 cut(s) | 131, 192, 1138 |
| PspPI | GGNCC | 3 cut(s) | 894, 992, 1015 |
| PstNI | CAGNNNCTG | 2 cut(s) | 320, 1412 |
| PsuI | RGATCY | 2 cut(s) | 25, 1603 |
| RsaI | GTAC | 4 cut(s) | 620, 747, 1172, 1314 |
| RsaNI | GTAC | 4 cut(s) | 619, 746, 1171, 1313 |
| RseI | CAYNNNNRTG | 4 cut(s) | 149, 1025, 1050, 1356 |
| SacI | GAGCTC | 1 cut(s) | 600 |
| SalI | GTCGAC | 1 cut(s) | 451 |
| SaqAI | TTAA | 4 cut(s) | 672, 855, 1089, 1632 |
| SatI | GCNGC | 6 cut(s) | 774, 786, 795, 1056, 1257, 1446 |
| Sau3AI | GATC | 7 cut(s) | 25, 37, 1195, 1468, 1603, 1737, 1744 |
| Sau96I | GGNCC | 3 cut(s) | 894, 992, 1015 |
| ScrFI | CCNGG | 2 cut(s) | 1160, 1680 |
| SduI | GDGCHC | 4 cut(s) | 600, 657, 1308, 1579 |
| SfaNI | GCATC | 4 cut(s) | 890, 1042, 1054, 1209 |
| SinI | GGWCC | 2 cut(s) | 992, 1015 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 149, 1025, 1050, 1356 |
| SmlI | CTYRAG | 2 cut(s) | 599, 1059 |
| SmoI | CTYRAG | 2 cut(s) | 599, 1059 |
| SphI | GCATGC | 1 cut(s) | 1108 |
| Sse9I | AATT | 9 cut(s) | 399, 503, 519, 683, 924, 933, 952, 1073, 1666 |
| SsiI | CCGC | 3 cut(s) | 163, 1332, 1757 |
| SspI | AATATT | 1 cut(s) | 413 |
| SspMI | CTAG | 6 cut(s) | 593, 719, 1310, 1346, 1562, 1777 |
| SstI | GAGCTC | 1 cut(s) | 600 |
| StyD4I | CCNGG | 2 cut(s) | 1158, 1678 |
| StyI | CCWWGG | 1 cut(s) | 1232 |
| TaaI | ACNGT | 4 cut(s) | 628, 1068, 1319, 1572 |
| TaiI | ACGT | 2 cut(s) | 336, 452 |
| TaqI | TCGA | 3 cut(s) | 452, 529, 959 |
| TasI | AATT | 9 cut(s) | 399, 503, 519, 683, 924, 933, 952, 1073, 1666 |
| TatI | WGTACW | 4 cut(s) | 618, 745, 1170, 1312 |
| TfiI | GAWTC | 6 cut(s) | 392, 763, 818, 938, 1251, 1415 |
| Tru1I | TTAA | 4 cut(s) | 672, 855, 1089, 1632 |
| Tru9I | TTAA | 4 cut(s) | 672, 855, 1089, 1632 |
| TscAI | CASTG | 5 cut(s) | 1032, 1276, 1504, 1577, 1747 |
| TseFI | GTSAC | 3 cut(s) | 261, 539, 1319 |
| TseI | GCWGC | 6 cut(s) | 773, 785, 794, 1055, 1256, 1445 |
| Tsp45I | GTSAC | 3 cut(s) | 261, 539, 1319 |
| TspDTI | ATGAA | 7 cut(s) | 305, 516, 573, 1277, 1392, 1598, 1679 |
| TspRI | CASTG | 5 cut(s) | 1032, 1276, 1504, 1577, 1747 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1151 |
| VpaK11BI | GGWCC | 2 cut(s) | 992, 1015 |
| XapI | RAATTY | 2 cut(s) | 503, 1666 |
| XceI | RCATGY | 3 cut(s) | 367, 619, 1108 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1230 |
| XmiI | GTMKAC | 1 cut(s) | 452 |
| XspI | CTAG | 6 cut(s) | 593, 719, 1310, 1346, 1562, 1777 |