pycom17g22850

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000353
Physical Location & Seq
Reverse (-)
21245019 .. 21248756
3738 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g22850.3

Sequence Viewer

Length: 1986 bp
ATGTCGAGGATTGTTAGAGGGCACGGAGGAAAGAGAAAAGAGTCGGTGGCGGTGGCCATAGACAAGGACAAAGGAAGTGAACATGCCATCAAATGGGCAGTTGATCATCTTCTCACCAGAGGCCAGCCTCTCACATTGCTCCATGTTAACCAAACAGGCTCCGACCCCCAACAAACCCAAGGGCTCTTTCTTTCTTTCCGTTCCTTGTGCTCCAAAAAGAATATAAAATGCAATGAAGTCGTAATCAAGGACACTGACATTCCAAACGCAATCATCGATTATGTTACGGCCAACACTGTTGAGATTTTGGTACTTGGCGCACCATCCAAAAGCGGCCTTTTCAGATTTAAGCTCACAGACGTTCCAAGCACAGTGTCAAAAGGGGCACCGGATTTTTGCTCTGTTTATGTGATTGGCAAAGGAAAGGTCTTGTACATGCGATGTGCTACTTCTGCACCCCAAAAATCTGCCCAACGTAATCAAGTACAACGCCAACCAAGCCCTAATTCTGAAGCCAGATCTTCAGCATTGAATAGGATGCAGAACTATTCTGCTCGTAACCAGCCAGATGGTGACATCCAAATCAAGTCACCGTTCGCAAGAGGAAGACCCTCCATGGACAAATCATATGAGCTTTCACCAGAAACTGATATATCATTTGTAAGCAGTGGAAGGCCAAGCATTGATCGCATGTCACCTCGCTGTGACTTTGGTGTAGAATCAGGAATGAACTCTCGACTTTCAATCGGCTCAGACGGGGACAACAGAAGCTCCACATCGTCTTACTCAAGACACAAGTTTTTAGATATGGGCTCTAAACAATATGAAATGTCTTCATGCTCAACTGACAGTGGAAAATCATGGTCATCGTCACAAAACATGGACGATGTGGAAGCTGAGATGAGGAGGCTCAAGCTAGAGCTTAAGCAAACAATGGAAATGTACAGTACAGCGTGCAAGGAAGCTCTGACAGCGAAAGACAAGGAAAAAGAAATTAACAGGTGGAAATTGGAAGATGAACAAAGGCTAGAAGTAGCGCGACATGCTGAGGAAGCTGCTTTGGCACTTGTGGAGAGGGAAAAAGCAAAATGTAAGGCAGCCATTGAGGCAGCTAAAGCAGCTCAAAGGATTGCTGAATTAGAAGCACAAAAAAGAAAGGTTGCAGAAATGAAAGCCCATAAAGAATCCGAAGAGAAGAACAAGGCACTTCAAGCAAGGTCATATGATCCTAGGTACAGGAAATACACAATTGAGGAGATTGAATCGGCAACAAATGATTTCTCACAAGCTCGAAAAATCGGTGAAGGAGGCTATGGACCAGTGTACAGAGGTGAACTAGACCACACACGAGTGGCAATAAAAGTTCTACGTCCAGATGCAGCTCAAGGACAGTCGCAGTTCAAGCAGGAGGTTGAAGTATTAAGCAGTATACGACATCCAAACATGGTTCTCCTCCTTGGAGCTTGTCCAGAGTACGGTTGCTTGGTCTACGAGTACATGTCTAATGGGAGCTTGGAAGATCGTCTCTTCTGCAGAGGTAACACCCCAGTTATTCCTTGGCAGATAAGGTTCCGAATCGCTGCAGAAATCGGGACAGGGCTTTTGTTCTTTCATCAGGCCAAGCCAGAACCCCTTGTACATCGTGACCTAAAACCTGGAAACATCTTGCTAGACCATAACTATGTGAGCAAGATCAGTGATGTAGGTTTAGCTAGGCTTGTCCCTCCATCTGTAGCCAACTCTGTCACTCAGTATCACATGACATCAACAGCCGGAACATTTTGCTACATCGACCCAGAATATCAGCAAACTGGCATGCTTGGGACAAAATCTGATATCTACTCACTTGGCGTCATGCTTCTACAACTAATAACAGCCAAGCCACCAATGGGGTTGACTCATCATGTTGAGCGGGCTATTGAGACGGGAACTTTTGCTGAGATGCTTGACCCTCTGTTCCTGATTGGCCAGTTGAGGAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Usp

Protein Analysis

662

Amino Acids

73.66

Weight (kDa)

8.88

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 385
AccB7I CCANNNNNTGG 1 cut(s) 93
AccBSI CCGCTC 1 cut(s) 1912
AccI GTMKAC 2 cut(s) 1429, 1488
AccII CGCG 1 cut(s) 1039
AciI CCGC 3 cut(s) 50, 333, 1912
AclWI GGATC 1 cut(s) 1220
AcoI YGGCCR 3 cut(s) 54, 288, 1966
AcuI CTGAAG 2 cut(s) 507, 531
AcyI GRCGYC 1 cut(s) 1851
AfiI CCNNNNNNNGG 3 cut(s) 93, 1475, 1889
AflII CTTAAG 1 cut(s) 923
AflIII ACRYGT 1 cut(s) 1497
AgsI TTSAA 6 cut(s) 532, 744, 1211, 1262, 1402, 1415
AjnI CCWGG 1 cut(s) 1654
AjuI GAANNNNNNNTTGG 4 cut(s) 171, 203, 490, 522
AleI CACNNNNGTG 1 cut(s) 1349
Alw21I GWGCWC 1 cut(s) 212
Alw26I GTCTC 2 cut(s) 1529, 1916
AlwI GGATC 1 cut(s) 1220
AlwNI CAGNNNCTG 1 cut(s) 647
AoxI GGCC 7 cut(s) 54, 121, 288, 334, 674, 1617, 1966
ApeKI GCWGC 6 cut(s) 1055, 1097, 1109, 1118, 1379, 1580
ArsI GACNNNNNNTTYG 4 cut(s) 411, 443, 1585, 1617
AspA2I CCTAGG 1 cut(s) 1229
AspLEI GCGC 2 cut(s) 320, 1039
AspS9I GGNCC 1 cut(s) 1316
AsuHPI GGTGA 7 cut(s) 106, 582, 584, 630, 687, 1313, 1343
AvaII GGWCC 1 cut(s) 1316
AvrII CCTAGG 1 cut(s) 1229
BaeGI GKGCMC 2 cut(s) 24, 388
BalI TGGCCA 2 cut(s) 56, 1968
BanI GGYRCC 1 cut(s) 385
BanII GRGCYC 2 cut(s) 186, 815
BauI CACGAG 1 cut(s) 1347
BbsI GAAGAC 2 cut(s) 613, 825
Bbv12I GWGCWC 1 cut(s) 212
BbvCI CCTCAGC 1 cut(s) 1047
BbvI GCAGC 6 cut(s) 1042, 1109, 1121, 1130, 1391, 1567
BccI CCATC 4 cut(s) 95, 331, 563, 1735
BceAI ACGGC 1 cut(s) 303
BcgI CGANNNNNNTGC 2 cut(s) 220, 254
BciT130I CCWGG 1 cut(s) 1656
BclI TGATCA 1 cut(s) 103
BcoDI GTCTC 2 cut(s) 1529, 1916
BfaI CTAG 6 cut(s) 917, 1028, 1230, 1337, 1670, 1713
BfmI CTRYAG 3 cut(s) 1531, 1581, 1731
BfrI CTTAAG 1 cut(s) 923
BglI GCCNNNNNGGC 1 cut(s) 1106
BglII AGATCT 1 cut(s) 518
BisI GCNGC 7 cut(s) 334, 1056, 1098, 1110, 1119, 1380, 1581
BlnI CCTAGG 1 cut(s) 1229
BlsI GCNGC 7 cut(s) 335, 1057, 1099, 1111, 1120, 1381, 1582
Bme1390I CCNGG 1 cut(s) 1656
Bme18I GGWCC 1 cut(s) 1316
BmgT120I GGNCC 1 cut(s) 1316
BmiI GGNNCC 3 cut(s) 160, 387, 1571
BmrFI CCNGG 1 cut(s) 1656
BmrI ACTGGG 1 cut(s) 1541
BmsI GCATC 3 cut(s) 528, 1366, 1932
BmuI ACTGGG 1 cut(s) 1541
BpiI GAAGAC 2 cut(s) 613, 825
Bpu10I CCTNAGC 1 cut(s) 1047
BpuEI CTTGAG 3 cut(s) 772, 896, 1368
Bsa29I ATCGAT 1 cut(s) 276
BsaHI GRCGYC 1 cut(s) 1851
BsaJI CCNNGG 5 cut(s) 178, 615, 1229, 1456, 1556
BsaWI WCCGGW 1 cut(s) 388
BsaXI ACNNNNNCTCC 2 cut(s) 755, 785
Bsc4I CCNNNNNNNGG 3 cut(s) 93, 1475, 1889
Bse1I ACTGG 4 cut(s) 1319, 1547, 1816, 1969
Bse3DI GCAATG 2 cut(s) 134, 238
BseBI CCWGG 1 cut(s) 1656
BseCI ATCGAT 1 cut(s) 276
BseDI CCNNGG 5 cut(s) 178, 615, 1229, 1456, 1556
BseGI GGATG 4 cut(s) 323, 543, 576, 1435
BseLI CCNNNNNNNGG 3 cut(s) 93, 1475, 1889
BseMI GCAATG 2 cut(s) 134, 238
BseMII CTCAG 5 cut(s) 765, 888, 1038, 1763, 1929
BseNI ACTGG 4 cut(s) 1319, 1547, 1816, 1969
BseRI GAGGAG 3 cut(s) 919, 1268, 1442
BseSI GKGCMC 2 cut(s) 24, 388
BseXI GCAGC 6 cut(s) 1042, 1109, 1121, 1130, 1391, 1567
BsgI GTGCAG 1 cut(s) 438
Bsh1236I CGCG 1 cut(s) 1039
BshFI GGCC 7 cut(s) 56, 123, 290, 336, 676, 1619, 1968
BshNI GGYRCC 1 cut(s) 385
BshVI ATCGAT 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 212
BsiSI CCGG 2 cut(s) 389, 1773
BslFI GGGAC 4 cut(s) 773, 1606, 1706, 1837
BslI CCNNNNNNNGG 3 cut(s) 93, 1475, 1889
BsmAI GTCTC 2 cut(s) 1529, 1916
BsmBI CGTCTC 2 cut(s) 1529, 1916
BsmFI GGGAC 4 cut(s) 773, 1606, 1706, 1837
BsnI GGCC 7 cut(s) 56, 123, 290, 336, 676, 1619, 1968
Bsp1286I GDGCHC 5 cut(s) 24, 186, 212, 388, 815
Bsp1407I TGTACA 4 cut(s) 432, 942, 1323, 1636
Bsp143I GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
Bsp19I CCATGG 1 cut(s) 615
BspACI CCGC 3 cut(s) 50, 333, 1912
BspANI GGCC 7 cut(s) 56, 123, 290, 336, 676, 1619, 1968
BspCNI CTCAG 5 cut(s) 764, 889, 1039, 1762, 1930
BspDI ATCGAT 1 cut(s) 276
BspFNI CGCG 1 cut(s) 1039
BspLI GGNNCC 3 cut(s) 160, 387, 1571
BspMAI CTGCAG 2 cut(s) 1535, 1585
BspPI GGATC 1 cut(s) 1220
BspT107I GGYRCC 1 cut(s) 385
BspTI CTTAAG 1 cut(s) 923
BsrBI CCGCTC 1 cut(s) 1912
BsrDI GCAATG 2 cut(s) 134, 238
BsrGI TGTACA 4 cut(s) 432, 942, 1323, 1636
BsrI ACTGG 4 cut(s) 1319, 1547, 1816, 1969
BssECI CCNNGG 5 cut(s) 178, 615, 1229, 1456, 1556
BssMI GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
BssNAI GTATAC 1 cut(s) 1430
BssNI GRCGYC 1 cut(s) 1851
BssSI CACGAG 1 cut(s) 1347
BssT1I CCWWGG 5 cut(s) 178, 615, 1229, 1456, 1556
Bst1107I GTATAC 1 cut(s) 1430
Bst2BI CACGAG 1 cut(s) 1347
Bst2UI CCWGG 1 cut(s) 1656
Bst4CI ACNGT 7 cut(s) 298, 373, 594, 851, 947, 1392, 1478
Bst6I CTCTTC 2 cut(s) 1185, 1532
BstACI GRCGYC 1 cut(s) 1851
BstAFI CTTAAG 1 cut(s) 923
BstAUI TGTACA 4 cut(s) 432, 942, 1323, 1636
BstC8I GCNNGC 4 cut(s) 125, 955, 1817, 1914
BstDEI CTNAG 5 cut(s) 751, 897, 1047, 1749, 1938
BstDSI CCRYGG 1 cut(s) 615
BstF5I GGATG 4 cut(s) 323, 543, 576, 1435
BstFNI CGCG 1 cut(s) 1039
BstHHI GCGC 2 cut(s) 320, 1039
BstKTI GATC 6 cut(s) 106, 521, 688, 1228, 1522, 1695
BstMAI GTCTC 2 cut(s) 1529, 1916
BstMBI GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
BstNI CCWGG 1 cut(s) 1656
BstNSI RCATGY 6 cut(s) 86, 439, 694, 1046, 1501, 1819
BstSCI CCNGG 1 cut(s) 1654
BstSFI CTRYAG 3 cut(s) 1531, 1581, 1731
BstSLI GKGCMC 2 cut(s) 24, 388
BstUI CGCG 1 cut(s) 1039
BstV1I GCAGC 6 cut(s) 1042, 1109, 1121, 1130, 1391, 1567
BstV2I GAAGAC 2 cut(s) 613, 825
BstX2I RGATCY 1 cut(s) 518
BstXI CCANNNNNNTGG 1 cut(s) 569
BstYI RGATCY 1 cut(s) 518
BstZ17I GTATAC 1 cut(s) 1430
Bsu15I ATCGAT 1 cut(s) 276
BsuRI GGCC 7 cut(s) 56, 123, 290, 336, 676, 1619, 1968
BsuTUI ATCGAT 1 cut(s) 276
BtgI CCRYGG 1 cut(s) 615
BtgZI GCGATG 1 cut(s) 454
BtsCI GGATG 4 cut(s) 323, 543, 576, 1435
BtsI GCAGTG 1 cut(s) 673
BtsIMutI CAGTG 7 cut(s) 252, 294, 378, 673, 856, 1326, 1702
Cac8I GCNNGC 4 cut(s) 125, 955, 1817, 1914
CaiI CAGNNNCTG 1 cut(s) 647
CfoI GCGC 2 cut(s) 320, 1039
Cfr13I GGNCC 1 cut(s) 1316
ClaI ATCGAT 1 cut(s) 276
CseI GACGC 1 cut(s) 1840
DdeI CTNAG 5 cut(s) 751, 897, 1047, 1749, 1938
DpnI GATC 6 cut(s) 105, 520, 687, 1227, 1521, 1694
DpnII GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
EaeI YGGCCR 3 cut(s) 54, 288, 1966
Eam1104I CTCTTC 2 cut(s) 1185, 1532
EarI CTCTTC 2 cut(s) 1185, 1532
Eco130I CCWWGG 5 cut(s) 178, 615, 1229, 1456, 1556
Eco24I GRGCYC 2 cut(s) 186, 815
Eco32I GATATC 1 cut(s) 1837
Eco47I GGWCC 1 cut(s) 1316
Eco57I CTGAAG 2 cut(s) 507, 531
EcoRII CCWGG 1 cut(s) 1654
EcoRV GATATC 1 cut(s) 1837
EcoT14I CCWWGG 5 cut(s) 178, 615, 1229, 1456, 1556
EcoT38I GRGCYC 2 cut(s) 186, 815
ErhI CCWWGG 5 cut(s) 178, 615, 1229, 1456, 1556
Esp3I CGTCTC 2 cut(s) 1529, 1916
FaqI GGGAC 4 cut(s) 773, 1606, 1706, 1837
FauI CCCGC 1 cut(s) 1905
FauNDI CATATG 2 cut(s) 628, 1222
FbaI TGATCA 1 cut(s) 103
FblI GTMKAC 2 cut(s) 1429, 1488
Fnu4HI GCNGC 7 cut(s) 334, 1056, 1098, 1110, 1119, 1380, 1581
FokI GGATG 4 cut(s) 310, 550, 563, 1422
FriOI GRGCYC 2 cut(s) 186, 815
Fsp4HI GCNGC 7 cut(s) 334, 1056, 1098, 1110, 1119, 1380, 1581
FspBI CTAG 6 cut(s) 917, 1028, 1230, 1337, 1670, 1713
GlaI GCGC 2 cut(s) 319, 1038
GluI GCNGC 7 cut(s) 334, 1056, 1098, 1110, 1119, 1380, 1581
HaeIII GGCC 7 cut(s) 56, 123, 290, 336, 676, 1619, 1968
HapII CCGG 2 cut(s) 389, 1773
HgaI GACGC 1 cut(s) 1840
HhaI GCGC 2 cut(s) 320, 1039
Hin1I GRCGYC 1 cut(s) 1851
Hin6I GCGC 2 cut(s) 318, 1037
HinP1I GCGC 2 cut(s) 318, 1037
HincII GTYRAC 2 cut(s) 148, 1896
HindII GTYRAC 2 cut(s) 148, 1896
HinfI GANTC 6 cut(s) 41, 719, 1184, 1262, 1575, 1897
HpaI GTTAAC 1 cut(s) 148
HpaII CCGG 2 cut(s) 389, 1773
HphI GGTGA 7 cut(s) 106, 582, 584, 630, 687, 1313, 1343
Hpy166II GTNNAC 7 cut(s) 80, 148, 1324, 1334, 1430, 1489, 1896
Hpy188I TCNGA 8 cut(s) 163, 344, 511, 754, 969, 1189, 1574, 1834
Hpy188III TCNNGA 8 cut(s) 723, 735, 789, 1373, 1469, 1591, 1643, 1960
Hpy8I GTNNAC 7 cut(s) 80, 148, 1324, 1334, 1430, 1489, 1896
HpyAV CCTTC 2 cut(s) 666, 1298
HpyCH4III ACNGT 7 cut(s) 298, 373, 594, 851, 947, 1392, 1478
HpyCH4IV ACGT 3 cut(s) 360, 475, 1369
HpyCH4V TGCA 8 cut(s) 231, 455, 541, 957, 1163, 1379, 1533, 1583
HpyF3I CTNAG 5 cut(s) 751, 897, 1047, 1749, 1938
HpySE526I ACGT 3 cut(s) 360, 475, 1369
Hsp92I GRCGYC 1 cut(s) 1851
HspAI GCGC 2 cut(s) 318, 1037
Ksp22I TGATCA 1 cut(s) 103
KspAI GTTAAC 1 cut(s) 148
Kzo9I GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
LmnI GCTCC 6 cut(s) 144, 164, 215, 776, 1460, 1509
Lsp1109I GCAGC 6 cut(s) 1042, 1109, 1121, 1130, 1391, 1567
LweI GCATC 3 cut(s) 528, 1366, 1932
MaeI CTAG 6 cut(s) 917, 1028, 1230, 1337, 1670, 1713
MaeII ACGT 3 cut(s) 360, 475, 1369
MalI GATC 6 cut(s) 105, 520, 687, 1227, 1521, 1694
MbiI CCGCTC 1 cut(s) 1912
MboI GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
MboII GAAGA 9 cut(s) 101, 513, 618, 825, 1025, 1202, 1207, 1519, 1529
MfeI CAATTG 1 cut(s) 1248
MflI RGATCY 1 cut(s) 518
MhlI GDGCHC 5 cut(s) 24, 186, 212, 388, 815
MlsI TGGCCA 2 cut(s) 56, 1968
MluCI AATT 5 cut(s) 505, 993, 1007, 1136, 1248
MluNI TGGCCA 2 cut(s) 56, 1968
MlyI GAGTC 2 cut(s) 50, 1891
MmeI TCCRAC 1 cut(s) 186
Mox20I TGGCCA 2 cut(s) 56, 1968
MscI TGGCCA 2 cut(s) 56, 1968
MseI TTAA 5 cut(s) 147, 348, 924, 996, 1421
MslI CAYNNNNRTG 2 cut(s) 1349, 1680
Msp20I TGGCCA 2 cut(s) 56, 1968
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 2 cut(s) 389, 1773
MspR9I CCNGG 1 cut(s) 1656
MunI CAATTG 1 cut(s) 1248
MvaI CCWGG 1 cut(s) 1656
MvnI CGCG 1 cut(s) 1039
NcoI CCATGG 1 cut(s) 615
NdeI CATATG 2 cut(s) 628, 1222
NdeII GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
NlaIV GGNNCC 3 cut(s) 160, 387, 1571
NmuCI GTSAC 7 cut(s) 572, 588, 693, 704, 870, 1643, 1744
NspI RCATGY 6 cut(s) 86, 439, 694, 1046, 1501, 1819
OliI CACNNNNGTG 1 cut(s) 1349
PaeI GCATGC 1 cut(s) 1819
PciI ACATGT 1 cut(s) 1497
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PfeI GAWTC 4 cut(s) 719, 1184, 1262, 1575
PflMI CCANNNNNTGG 1 cut(s) 93
PkrI GCNGC 7 cut(s) 335, 1057, 1099, 1111, 1120, 1381, 1582
PleI GAGTC 2 cut(s) 49, 1891
PpsI GAGTC 2 cut(s) 49, 1891
PscI ACATGT 1 cut(s) 1497
Psp6I CCWGG 1 cut(s) 1654
PspGI CCWGG 1 cut(s) 1654
PspN4I GGNNCC 3 cut(s) 160, 387, 1571
PspPI GGNCC 1 cut(s) 1316
PsrI GAACNNNNNNTAC 2 cut(s) 1620, 1652
PstI CTGCAG 2 cut(s) 1535, 1585
PstNI CAGNNNCTG 1 cut(s) 647
PsuI RGATCY 1 cut(s) 518
RseI CAYNNNNRTG 2 cut(s) 1349, 1680
SaqAI TTAA 5 cut(s) 147, 348, 924, 996, 1421
SatI GCNGC 7 cut(s) 334, 1056, 1098, 1110, 1119, 1380, 1581
Sau3AI GATC 6 cut(s) 103, 518, 685, 1225, 1519, 1692
Sau96I GGNCC 1 cut(s) 1316
SchI GAGTC 2 cut(s) 50, 1891
ScrFI CCNGG 1 cut(s) 1656
SduI GDGCHC 5 cut(s) 24, 186, 212, 388, 815
SfaNI GCATC 3 cut(s) 528, 1366, 1932
SfcI CTRYAG 3 cut(s) 1531, 1581, 1731
SinI GGWCC 1 cut(s) 1316
SmiMI CAYNNNNRTG 2 cut(s) 1349, 1680
SmlI CTYRAG 4 cut(s) 787, 911, 923, 1383
SmoI CTYRAG 4 cut(s) 787, 911, 923, 1383
SphI GCATGC 1 cut(s) 1819
Sse9I AATT 5 cut(s) 505, 993, 1007, 1136, 1248
SsiI CCGC 3 cut(s) 50, 333, 1912
SspMI CTAG 6 cut(s) 917, 1028, 1230, 1337, 1670, 1713
StyD4I CCNGG 1 cut(s) 1654
StyI CCWWGG 5 cut(s) 178, 615, 1229, 1456, 1556
TaaI ACNGT 7 cut(s) 298, 373, 594, 851, 947, 1392, 1478
TaiI ACGT 3 cut(s) 363, 478, 1372
TaqI TCGA 5 cut(s) 5, 276, 736, 1291, 1791
TasI AATT 5 cut(s) 505, 993, 1007, 1136, 1248
TatI WGTACW 7 cut(s) 432, 484, 942, 947, 1323, 1494, 1636
TauI GCSGC 1 cut(s) 336
TfiI GAWTC 4 cut(s) 719, 1184, 1262, 1575
Tru1I TTAA 5 cut(s) 147, 348, 924, 996, 1421
Tru9I TTAA 5 cut(s) 147, 348, 924, 996, 1421
TscAI CASTG 7 cut(s) 259, 301, 378, 673, 856, 1326, 1702
TseFI GTSAC 7 cut(s) 572, 588, 693, 704, 870, 1643, 1744
TseI GCWGC 6 cut(s) 1055, 1097, 1109, 1118, 1379, 1580
Tsp45I GTSAC 7 cut(s) 572, 588, 693, 704, 870, 1643, 1744
TspDTI ATGAA 7 cut(s) 249, 743, 825, 840, 1032, 1184, 1601
TspGWI ACGGA 2 cut(s) 39, 188
TspRI CASTG 7 cut(s) 259, 301, 378, 673, 856, 1326, 1702
Van91I CCANNNNNTGG 1 cut(s) 93
Vha464I CTTAAG 1 cut(s) 923
VpaK11BI GGWCC 1 cut(s) 1316
XceI RCATGY 6 cut(s) 86, 439, 694, 1046, 1501, 1819
XcmI CCANNNNNNNNNTGG 2 cut(s) 1554, 1885
XmaJI CCTAGG 1 cut(s) 1229
XmiI GTMKAC 2 cut(s) 1429, 1488
XspI CTAG 6 cut(s) 917, 1028, 1230, 1337, 1670, 1713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.