U-box domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Usp | PF00582 | 14 - 122 | 7.9e-09 | Universal stress protein family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 29, 153, 220, 354 |
| AfaI | GTAC | 2 cut(s) | 333, 368 |
| AgsI | TTSAA | 3 cut(s) | 185, 212, 318 |
| AluBI | AGCT | 1 cut(s) | 122 |
| AluI | AGCT | 1 cut(s) | 122 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 369 |
| AoxI | GGCC | 1 cut(s) | 355 |
| ApeKI | GCWGC | 3 cut(s) | 69, 130, 222 |
| AspLEI | GCGC | 1 cut(s) | 343 |
| AsuHPI | GGTGA | 1 cut(s) | 100 |
| BbvI | GCAGC | 3 cut(s) | 81, 117, 209 |
| BceAI | ACGGC | 1 cut(s) | 328 |
| BfmI | CTRYAG | 1 cut(s) | 45 |
| BisI | GCNGC | 4 cut(s) | 70, 131, 223, 355 |
| BlsI | GCNGC | 4 cut(s) | 71, 132, 224, 356 |
| BpuEI | CTTGAG | 1 cut(s) | 177 |
| Bse1I | ACTGG | 1 cut(s) | 297 |
| Bse3DI | GCAATG | 1 cut(s) | 259 |
| BseMI | GCAATG | 1 cut(s) | 259 |
| BseNI | ACTGG | 1 cut(s) | 297 |
| BseXI | GCAGC | 3 cut(s) | 81, 117, 209 |
| BshFI | GGCC | 1 cut(s) | 357 |
| BsnI | GGCC | 1 cut(s) | 357 |
| Bsp143I | GATC | 1 cut(s) | 264 |
| BspACI | CCGC | 4 cut(s) | 29, 153, 220, 354 |
| BspANI | GGCC | 1 cut(s) | 357 |
| BspHI | TCATGA | 1 cut(s) | 261 |
| BsrDI | GCAATG | 1 cut(s) | 259 |
| BsrI | ACTGG | 1 cut(s) | 297 |
| BssMI | GATC | 1 cut(s) | 264 |
| BstDEI | CTNAG | 1 cut(s) | 362 |
| BstHHI | GCGC | 1 cut(s) | 343 |
| BstKTI | GATC | 1 cut(s) | 267 |
| BstMBI | GATC | 1 cut(s) | 264 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 228 |
| BstNSI | RCATGY | 1 cut(s) | 80 |
| BstSFI | CTRYAG | 1 cut(s) | 45 |
| BstV1I | GCAGC | 3 cut(s) | 81, 117, 209 |
| BsuRI | GGCC | 1 cut(s) | 357 |
| BtsIMutI | CAGTG | 1 cut(s) | 290 |
| CaiI | CAGNNNCTG | 1 cut(s) | 369 |
| CciI | TCATGA | 1 cut(s) | 261 |
| CfoI | GCGC | 1 cut(s) | 343 |
| Csp6I | GTAC | 2 cut(s) | 332, 367 |
| CviAII | CATG | 2 cut(s) | 77, 262 |
| CviJI | RGCY | 6 cut(s) | 44, 72, 122, 191, 197, 357 |
| CviKI_1 | RGCY | 6 cut(s) | 44, 72, 122, 191, 197, 357 |
| CviQI | GTAC | 2 cut(s) | 332, 367 |
| DdeI | CTNAG | 1 cut(s) | 362 |
| DpnI | GATC | 1 cut(s) | 266 |
| DpnII | GATC | 1 cut(s) | 264 |
| FaeI | CATG | 2 cut(s) | 80, 265 |
| FaiI | YATR | 4 cut(s) | 78, 263, 281, 303 |
| FatI | CATG | 2 cut(s) | 76, 261 |
| FauI | CCCGC | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 4 cut(s) | 70, 131, 223, 355 |
| Fsp4HI | GCNGC | 4 cut(s) | 70, 131, 223, 355 |
| GlaI | GCGC | 1 cut(s) | 342 |
| GluI | GCNGC | 4 cut(s) | 70, 131, 223, 355 |
| HaeIII | GGCC | 1 cut(s) | 357 |
| HhaI | GCGC | 1 cut(s) | 343 |
| Hin1II | CATG | 2 cut(s) | 80, 265 |
| Hin6I | GCGC | 1 cut(s) | 341 |
| HinP1I | GCGC | 1 cut(s) | 341 |
| HphI | GGTGA | 1 cut(s) | 100 |
| Hpy166II | GTNNAC | 1 cut(s) | 298 |
| Hpy188III | TCNNGA | 2 cut(s) | 262, 348 |
| Hpy8I | GTNNAC | 1 cut(s) | 298 |
| Hpy99I | CGWCG | 1 cut(s) | 349 |
| HpyAV | CCTTC | 2 cut(s) | 19, 368 |
| HpyCH4V | TGCA | 2 cut(s) | 231, 252 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 228 |
| HpyF3I | CTNAG | 1 cut(s) | 362 |
| Hsp92II | CATG | 2 cut(s) | 80, 265 |
| HspAI | GCGC | 1 cut(s) | 341 |
| Kzo9I | GATC | 1 cut(s) | 264 |
| LmnI | GCTCC | 1 cut(s) | 138 |
| LpnPI | CCDG | 3 cut(s) | 124, 278, 349 |
| Lsp1109I | GCAGC | 3 cut(s) | 81, 117, 209 |
| MaeIII | GTNAC | 1 cut(s) | 106 |
| MalI | GATC | 1 cut(s) | 266 |
| MboI | GATC | 1 cut(s) | 264 |
| MboII | GAAGA | 1 cut(s) | 18 |
| MluCI | AATT | 2 cut(s) | 156, 313 |
| MnlI | CCTC | 4 cut(s) | 28, 107, 172, 262 |
| MspA1I | CMGCKG | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 228 |
| NdeII | GATC | 1 cut(s) | 264 |
| NlaIII | CATG | 2 cut(s) | 80, 265 |
| NmuCI | GTSAC | 1 cut(s) | 106 |
| NspI | RCATGY | 1 cut(s) | 80 |
| PagI | TCATGA | 1 cut(s) | 261 |
| PkrI | GCNGC | 4 cut(s) | 71, 132, 224, 356 |
| PstNI | CAGNNNCTG | 1 cut(s) | 369 |
| RsaI | GTAC | 2 cut(s) | 333, 368 |
| RsaNI | GTAC | 2 cut(s) | 332, 367 |
| SatI | GCNGC | 4 cut(s) | 70, 131, 223, 355 |
| Sau3AI | GATC | 1 cut(s) | 264 |
| SetI | ASST | 6 cut(s) | 13, 39, 118, 124, 183, 368 |
| SfcI | CTRYAG | 1 cut(s) | 45 |
| SmlI | CTYRAG | 1 cut(s) | 192 |
| SmoI | CTYRAG | 1 cut(s) | 192 |
| Sse9I | AATT | 2 cut(s) | 156, 313 |
| SsiI | CCGC | 4 cut(s) | 29, 153, 220, 354 |
| TaqI | TCGA | 3 cut(s) | 267, 321, 347 |
| TasI | AATT | 2 cut(s) | 156, 313 |
| TauI | GCSGC | 1 cut(s) | 357 |
| TscAI | CASTG | 1 cut(s) | 297 |
| TseFI | GTSAC | 1 cut(s) | 106 |
| TseI | GCWGC | 3 cut(s) | 69, 130, 222 |
| Tsp45I | GTSAC | 1 cut(s) | 106 |
| TspDTI | ATGAA | 1 cut(s) | 270 |
| TspRI | CASTG | 1 cut(s) | 297 |
| XceI | RCATGY | 1 cut(s) | 80 |