pycom17g21790

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000353
Physical Location & Seq
Reverse (-)
20228546 .. 20231742
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g21790.2

Sequence Viewer

Length: 1962 bp
ATGTTGCCGCTAATTCTATTCAAGTTTTGGTGCTTGGTGCACCATCCAAAAACAGCTTTGGCTTCTTCAGGTGCTTTTGATGTGAATTTTTTATGCACAGAATTCAAAGTGAAAGACATCCCAAGCACTGTGTCAAAAGGGGCACCAGACTTTTGCACCGTGTATGTCATTGGCAAAGGAAAGATCACGCATTGCCGACCAGCTACTGCCGAACTACCCTCAAATGGTTCGAGAAATTCGCAACACATGAGGCTCCACCAGCACTCCAGAGTTATTGAGTTTTCTTTAATTGGCACAGAACCGGAGAGCGCGCTGAAGAACAAGTTCAGGCCAGCATTAACAAGAGCAACACCTATAGTGAAGAAATCATATGAGCCCTTGCCTGACATTGATTTACCGCCTGTGAGCAGCGAAGTGCAAACCATGGATCGCATCTTAAATTATGATAGCACGCCGTCGAAAATGACCCATCAAAGTTCAAGCGGCTCAGAGTTGGACAGCAGAAGCTCTTTGTCATCTTACTCCGGAACCAAGTTCATTGACATGACATCTGCGCCGAATGGTTTTTCATCATCCTCATTTGAAAGTGGAAGGTCATGGTCATCACAAAACAGGGATGACATGGAAGCTGAGATGAGGAGGCTCAGGCTAGAGCTCAAGCAAACAATGGAGATGTACAGCATGGCTTGCAAGGAGGCAATCTCAGCAAAACATAGGGAAAAGGAACTTCAACAGTGGAAATTGAACGGAAAGCACAGATTAGAAGAAGCACGACTCGCTGAGGAAGCTGCATGTGCACTTGCACGGAAGGAGAAAGCAAAAAGTAAGGTAGCGATTGAGGCAGCACAAGCAGCTGAAAGGGTTGCAGAACTGGAAGCAGAAAGACGGAAAAACTCGAAAATGAAAGCTCTTGAAAAAGCTAAAGGAAAGAAGTCGCTAGAATCAAAGGGGTACGATCTGAGGTACAGGAGATACACAATTGAAGATATTGAAGCGGCGACAAATTATTTTTCACAAGCCTATAAGATTGGAGAAGGAGGCTACGGTCCGGTCTACAGAGGTGAACTAGATCACACACCAGTAGCAATAAAAGTTCTGCGTCCGGATGCTGCCCAAGGGCGGTCGCAATTCCAGAAAGAGGTTGAAGTATTGAGCTGCATTAGGCATCCAAACATGGTTCTCCTACTTGGAGCCTGCCCAGAATTTGGTTGTCTGGTCTATGAGTACATGGCCAATGGTAGCTTAGAAGACCGTCTCTTCCGGAAAGGCCACACCCCGGTGATTCCTTGGCAGCTAAGGTTCAGAATTGCTGCAGAAATTGCCACCGGACTTTTGTTTCTTCATCAGACCAAGCCAGAACCCGTTGTACACCGTGACCTAAAACCCGGCAACATCTTGCTAGACCATAACTATGTGAGTAAGATTAGTGACGTAGGTTTGGCCAGGCTTGTCCCTCCATCAGTAGCCAATGCTGTCACTCAATATCACGTGACATCAATGGCCGGAACATTCTGTTATATCGACCCAGAGTATCAGCAGACCGGAATGCTTGGGGTGAAATCTGACGTTTACTCACTCGGGGTCATGCTTCTACAACTAATAACTGCCCAGCCGCCAATGGGTTTGACTTTCAAAGTTGAGGATGCTATTGAGAGTGGGACTTTCGCGGAGATGCTTGACCCTGATGTTCCCGACTGGCCTGTTAAGGAAGCATTAAAGTTTGCGCAGCTAGCCTTACAGTGCGCTGAAATGAGGAGAAAAGACAGACCGGATCTTGGCAAGGTTGTGCTACCGGAGCTAAACAGATTGAGAGCACTCGCGGACGAGAGAATGGATCCTTTCAGGCTAGGTGGTAATGCACTACACTCACCAAGACAAGCCGCATCAAATTTTACGAGACTTGTAACTCAAGTAATTTACAGGCCGCATCCTCAAGAGTCATTGCTAAAAAATTGTGAATGA

Protein Analysis

654

Amino Acids

73.2

Weight (kDa)

8.83

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1725
AccB1I GGYRCC 1 cut(s) 142
AccB7I CCANNNNNTGG 1 cut(s) 1205
AccI GTMKAC 1 cut(s) 1053
AccII CGCG 3 cut(s) 311, 1667, 1820
AccIII TCCGGA 3 cut(s) 524, 1102, 1260
AclWI GGATC 4 cut(s) 435, 1779, 1829, 1842
AcoI YGGCCR 3 cut(s) 1230, 1440, 1500
AcsI RAATTY 5 cut(s) 85, 101, 235, 1202, 1888
AcuI CTGAAG 2 cut(s) 51, 335
AcvI CACGTG 1 cut(s) 1489
AfaI GTAC 5 cut(s) 677, 953, 965, 1226, 1368
AfiI CCNNNNNNNGG 7 cut(s) 224, 1119, 1138, 1205, 1276, 1619, 1775
AjnI CCWGG 1 cut(s) 1442
AleI CACNNNNGTG 1 cut(s) 1277
Alw21I GWGCWC 4 cut(s) 42, 657, 799, 1816
Alw26I GTCTC 2 cut(s) 1259, 1891
Alw44I GTGCAC 2 cut(s) 38, 795
AlwI GGATC 4 cut(s) 435, 1779, 1829, 1842
AlwNI CAGNNNCTG 1 cut(s) 206
Ama87I CYCGRG 1 cut(s) 1577
Aor13HI TCCGGA 3 cut(s) 524, 1102, 1260
AoxI GGCC 7 cut(s) 329, 1230, 1267, 1440, 1500, 1697, 1922
ApaLI GTGCAC 2 cut(s) 38, 795
ApeKI GCWGC 9 cut(s) 408, 788, 842, 851, 1109, 1155, 1291, 1310, 1726
ApoI RAATTY 5 cut(s) 85, 101, 235, 1202, 1888
Asp700I GAANNNNTTC 1 cut(s) 323
AspLEI GCGC 5 cut(s) 311, 313, 556, 1726, 1745
AspS9I GGNCC 1 cut(s) 1046
AsuC2I CCSGG 2 cut(s) 1277, 1386
AsuHPI GGTGA 4 cut(s) 1073, 1291, 1567, 1860
AsuNHI GCTAGC 1 cut(s) 1729
AvaI CYCGRG 1 cut(s) 1577
AvaII GGWCC 1 cut(s) 1046
BaeGI GKGCMC 3 cut(s) 42, 145, 799
BalI TGGCCA 2 cut(s) 1232, 1442
BamHI GGATCC 1 cut(s) 1834
BanI GGYRCC 1 cut(s) 142
BanII GRGCYC 2 cut(s) 378, 657
BbrPI CACGTG 1 cut(s) 1489
BbsI GAAGAC 1 cut(s) 1254
Bbv12I GWGCWC 4 cut(s) 42, 657, 799, 1816
BbvCI CCTCAGC 1 cut(s) 780
BbvI GCAGC 9 cut(s) 420, 775, 854, 863, 1096, 1142, 1297, 1303, 1738
BccI CCATC 3 cut(s) 51, 477, 1465
BceAI ACGGC 1 cut(s) 439
BciT130I CCWGG 1 cut(s) 1444
BcnI CCSGG 2 cut(s) 1277, 1386
BcoDI GTCTC 2 cut(s) 1259, 1891
BfaI CTAG 6 cut(s) 650, 938, 1067, 1400, 1730, 1847
BfmI CTRYAG 3 cut(s) 354, 1054, 1311
Bme1390I CCNGG 3 cut(s) 1277, 1386, 1444
Bme18I GGWCC 1 cut(s) 1046
BmeT110I CYCGRG 1 cut(s) 1577
BmgT120I GGNCC 1 cut(s) 1046
BmiI GGNNCC 5 cut(s) 144, 254, 529, 1192, 1836
BmrFI CCNGG 3 cut(s) 1277, 1386, 1444
BmsI GCATC 7 cut(s) 441, 1096, 1174, 1633, 1662, 1892, 1936
BmtI GCTAGC 1 cut(s) 1733
BpiI GAAGAC 1 cut(s) 1254
BplI GAGNNNNNCTC 2 cut(s) 686, 718
BpmI CTGGAG 1 cut(s) 250
Bpu10I CCTNAGC 3 cut(s) 644, 780, 1295
BpuEI CTTGAG 3 cut(s) 641, 1893, 1917
BpuMI CCSGG 2 cut(s) 1277, 1386
BsaAI YACGTR 1 cut(s) 1489
BsaJI CCNNGG 4 cut(s) 423, 1114, 1275, 1286
BsaWI WCCGGW 9 cut(s) 301, 524, 1048, 1102, 1260, 1325, 1541, 1768, 1792
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bsc4I CCNNNNNNNGG 7 cut(s) 224, 1119, 1138, 1205, 1276, 1619, 1775
Bse1I ACTGG 3 cut(s) 876, 1079, 1700
Bse3DI GCAATG 2 cut(s) 190, 1940
BseAI TCCGGA 3 cut(s) 524, 1102, 1260
BseBI CCWGG 1 cut(s) 1444
BseDI CCNNGG 4 cut(s) 423, 1114, 1275, 1286
BseGI GGATG 8 cut(s) 43, 117, 572, 622, 1111, 1165, 1648, 1927
BseLI CCNNNNNNNGG 7 cut(s) 224, 1119, 1138, 1205, 1276, 1619, 1775
BseMI GCAATG 2 cut(s) 190, 1940
BseMII CTCAG 6 cut(s) 501, 621, 658, 717, 771, 950
BseNI ACTGG 3 cut(s) 876, 1079, 1700
BsePI GCGCGC 1 cut(s) 309
BseRI GAGGAG 2 cut(s) 652, 1768
BseSI GKGCMC 3 cut(s) 42, 145, 799
BseXI GCAGC 9 cut(s) 420, 775, 854, 863, 1096, 1142, 1297, 1303, 1738
BseYI CCCAGC 1 cut(s) 1608
Bsh1236I CGCG 3 cut(s) 311, 1667, 1820
Bsh1285I CGRYCG 1 cut(s) 1124
BshFI GGCC 7 cut(s) 331, 1232, 1269, 1442, 1502, 1699, 1924
BshNI GGYRCC 1 cut(s) 142
BsiEI CGRYCG 1 cut(s) 1124
BsiHKAI GWGCWC 4 cut(s) 42, 657, 799, 1816
BsiHKCI CYCGRG 1 cut(s) 1577
BslFI GGGAC 2 cut(s) 1436, 1672
BslI CCNNNNNNNGG 7 cut(s) 224, 1119, 1138, 1205, 1276, 1619, 1775
BsmAI GTCTC 2 cut(s) 1259, 1891
BsmBI CGTCTC 1 cut(s) 1259
BsmFI GGGAC 2 cut(s) 1436, 1672
BsmI GAATGC 1 cut(s) 1551
BsnI GGCC 7 cut(s) 331, 1232, 1269, 1442, 1502, 1699, 1924
BsoBI CYCGRG 1 cut(s) 1577
Bsp1286I GDGCHC 6 cut(s) 42, 145, 378, 657, 799, 1816
Bsp13I TCCGGA 3 cut(s) 524, 1102, 1260
Bsp1407I TGTACA 2 cut(s) 675, 1366
Bsp143I GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
Bsp19I CCATGG 1 cut(s) 423
BspANI GGCC 7 cut(s) 331, 1232, 1269, 1442, 1502, 1699, 1924
BspCNI CTCAG 6 cut(s) 500, 622, 657, 716, 772, 951
BspEI TCCGGA 3 cut(s) 524, 1102, 1260
BspFNI CGCG 3 cut(s) 311, 1667, 1820
BspLI GGNNCC 5 cut(s) 144, 254, 529, 1192, 1836
BspMAI CTGCAG 1 cut(s) 1315
BspOI GCTAGC 1 cut(s) 1733
BspPI GGATC 4 cut(s) 435, 1779, 1829, 1842
BspT107I GGYRCC 1 cut(s) 142
BsrDI GCAATG 2 cut(s) 190, 1940
BsrGI TGTACA 2 cut(s) 675, 1366
BsrI ACTGG 3 cut(s) 876, 1079, 1700
BssECI CCNNGG 4 cut(s) 423, 1114, 1275, 1286
BssHII GCGCGC 1 cut(s) 309
BssMI GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
BssT1I CCWWGG 3 cut(s) 423, 1114, 1286
Bst2UI CCWGG 1 cut(s) 1444
Bst4CI ACNGT 7 cut(s) 130, 160, 735, 1046, 1253, 1373, 1740
Bst6I CTCTTC 1 cut(s) 1262
BstAPI GCANNNNNTGC 2 cut(s) 687, 1319
BstAUI TGTACA 2 cut(s) 675, 1366
BstBAI YACGTR 1 cut(s) 1489
BstC8I GCNNGC 6 cut(s) 311, 333, 452, 688, 1195, 1731
BstDEI CTNAG 8 cut(s) 487, 630, 644, 703, 780, 959, 1243, 1295
BstDSI CCRYGG 1 cut(s) 423
BstF5I GGATG 8 cut(s) 43, 117, 572, 622, 1111, 1165, 1648, 1927
BstFNI CGCG 3 cut(s) 311, 1667, 1820
BstHHI GCGC 5 cut(s) 311, 313, 556, 1726, 1745
BstKTI GATC 6 cut(s) 186, 430, 958, 1072, 1774, 1837
BstMAI GTCTC 2 cut(s) 1259, 1891
BstMBI GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
BstMCI CGRYCG 1 cut(s) 1124
BstNI CCWGG 1 cut(s) 1444
BstNSI RCATGY 1 cut(s) 795
BstSCI CCNGG 3 cut(s) 1275, 1384, 1442
BstSFI CTRYAG 3 cut(s) 354, 1054, 1311
BstSLI GKGCMC 3 cut(s) 42, 145, 799
BstUI CGCG 3 cut(s) 311, 1667, 1820
BstV1I GCAGC 9 cut(s) 420, 775, 854, 863, 1096, 1142, 1297, 1303, 1738
BstV2I GAAGAC 1 cut(s) 1254
BstX2I RGATCY 2 cut(s) 1771, 1834
BstYI RGATCY 2 cut(s) 1771, 1834
BsuRI GGCC 7 cut(s) 331, 1232, 1269, 1442, 1502, 1699, 1924
BtgI CCRYGG 1 cut(s) 423
BtsCI GGATG 8 cut(s) 43, 117, 572, 622, 1111, 1165, 1648, 1927
BtsIMutI CAGTG 3 cut(s) 126, 740, 1745
Cac8I GCNNGC 6 cut(s) 311, 333, 452, 688, 1195, 1731
CaiI CAGNNNCTG 1 cut(s) 206
CfoI GCGC 5 cut(s) 311, 313, 556, 1726, 1745
Cfr13I GGNCC 1 cut(s) 1046
CpoI CGGWCCG 1 cut(s) 1046
CseI GACGC 1 cut(s) 1088
Csp6I GTAC 5 cut(s) 676, 952, 964, 1225, 1367
CspI CGGWCCG 1 cut(s) 1046
CviQI GTAC 5 cut(s) 676, 952, 964, 1225, 1367
DdeI CTNAG 8 cut(s) 487, 630, 644, 703, 780, 959, 1243, 1295
DpnI GATC 6 cut(s) 185, 429, 957, 1071, 1773, 1836
DpnII GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
EaeI YGGCCR 3 cut(s) 1230, 1440, 1500
Eam1104I CTCTTC 1 cut(s) 1262
EarI CTCTTC 1 cut(s) 1262
Ecl136II GAGCTC 1 cut(s) 655
Eco130I CCWWGG 3 cut(s) 423, 1114, 1286
Eco24I GRGCYC 2 cut(s) 378, 657
Eco47I GGWCC 1 cut(s) 1046
Eco53kI GAGCTC 1 cut(s) 655
Eco57I CTGAAG 2 cut(s) 51, 335
Eco72I CACGTG 1 cut(s) 1489
Eco88I CYCGRG 1 cut(s) 1577
EcoICRI GAGCTC 1 cut(s) 655
EcoRI GAATTC 1 cut(s) 101
EcoRII CCWGG 1 cut(s) 1442
EcoT14I CCWWGG 3 cut(s) 423, 1114, 1286
EcoT38I GRGCYC 2 cut(s) 378, 657
ErhI CCWWGG 3 cut(s) 423, 1114, 1286
Esp3I CGTCTC 1 cut(s) 1259
FaqI GGGAC 2 cut(s) 1436, 1672
FauNDI CATATG 1 cut(s) 370
FblI GTMKAC 1 cut(s) 1053
FokI GGATG 8 cut(s) 30, 104, 559, 629, 1118, 1152, 1655, 1914
FriOI GRGCYC 2 cut(s) 378, 657
FspBI CTAG 6 cut(s) 650, 938, 1067, 1400, 1730, 1847
FspI TGCGCA 1 cut(s) 1725
GlaI GCGC 5 cut(s) 310, 312, 555, 1725, 1744
GsaI CCCAGC 1 cut(s) 1612
GsuI CTGGAG 1 cut(s) 250
HaeIII GGCC 7 cut(s) 331, 1232, 1269, 1442, 1502, 1699, 1924
HgaI GACGC 1 cut(s) 1088
HhaI GCGC 5 cut(s) 311, 313, 556, 1726, 1745
Hin6I GCGC 5 cut(s) 309, 311, 554, 1724, 1743
HinP1I GCGC 5 cut(s) 309, 311, 554, 1724, 1743
HinfI GANTC 4 cut(s) 774, 941, 1282, 1937
HphI GGTGA 4 cut(s) 1073, 1291, 1567, 1860
Hpy166II GTNNAC 6 cut(s) 40, 797, 1054, 1064, 1369, 1570
Hpy188I TCNGA 5 cut(s) 490, 960, 1304, 1347, 1564
Hpy188III TCNNGA 9 cut(s) 231, 267, 525, 911, 1103, 1132, 1261, 1691, 1934
Hpy8I GTNNAC 6 cut(s) 40, 797, 1054, 1064, 1369, 1570
Hpy99I CGWCG 1 cut(s) 460
HpyAV CCTTC 3 cut(s) 585, 802, 1028
HpyCH4III ACNGT 7 cut(s) 130, 160, 735, 1046, 1253, 1373, 1740
HpyCH4IV ACGT 3 cut(s) 1431, 1488, 1566
HpyF3I CTNAG 8 cut(s) 487, 630, 644, 703, 780, 959, 1243, 1295
HpySE526I ACGT 3 cut(s) 1431, 1488, 1566
HspAI GCGC 5 cut(s) 309, 311, 554, 1724, 1743
Kpn2I TCCGGA 3 cut(s) 524, 1102, 1260
Kzo9I GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
LmnI GCTCC 3 cut(s) 258, 1190, 1795
Lsp1109I GCAGC 9 cut(s) 420, 775, 854, 863, 1096, 1142, 1297, 1303, 1738
LweI GCATC 7 cut(s) 441, 1096, 1174, 1633, 1662, 1892, 1936
MaeI CTAG 6 cut(s) 650, 938, 1067, 1400, 1730, 1847
MaeII ACGT 3 cut(s) 1431, 1488, 1566
MaeIII GTNAC 5 cut(s) 1373, 1427, 1474, 1489, 1903
MalI GATC 6 cut(s) 185, 429, 957, 1071, 1773, 1836
MboI GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
MboII GAAGA 8 cut(s) 57, 328, 373, 776, 995, 1249, 1259, 1331
MfeI CAATTG 1 cut(s) 978
MflI RGATCY 2 cut(s) 1771, 1834
MhlI GDGCHC 6 cut(s) 42, 145, 378, 657, 799, 1816
MlsI TGGCCA 2 cut(s) 1232, 1442
MluNI TGGCCA 2 cut(s) 1232, 1442
MlyI GAGTC 2 cut(s) 768, 1946
MmeI TCCRAC 1 cut(s) 474
Mox20I TGGCCA 2 cut(s) 1232, 1442
MroI TCCGGA 3 cut(s) 524, 1102, 1260
MroXI GAANNNNTTC 1 cut(s) 323
MscI TGGCCA 2 cut(s) 1232, 1442
MseI TTAA 5 cut(s) 287, 338, 437, 1704, 1715
MslI CAYNNNNRTG 3 cut(s) 542, 1277, 1410
Msp20I TGGCCA 2 cut(s) 1232, 1442
MspA1I CMGCKG 1 cut(s) 854
MspR9I CCNGG 3 cut(s) 1277, 1386, 1444
MunI CAATTG 1 cut(s) 978
Mva1269I GAATGC 1 cut(s) 1551
MvaI CCWGG 1 cut(s) 1444
MvnI CGCG 3 cut(s) 311, 1667, 1820
NciI CCSGG 2 cut(s) 1277, 1386
NcoI CCATGG 1 cut(s) 423
NdeI CATATG 1 cut(s) 370
NdeII GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
NheI GCTAGC 1 cut(s) 1729
NlaIV GGNNCC 5 cut(s) 144, 254, 529, 1192, 1836
NmuCI GTSAC 4 cut(s) 1373, 1427, 1474, 1489
NsbI TGCGCA 1 cut(s) 1725
NspI RCATGY 1 cut(s) 795
OliI CACNNNNGTG 1 cut(s) 1277
PauI GCGCGC 1 cut(s) 309
PctI GAATGC 1 cut(s) 1551
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 2 cut(s) 941, 1282
PflMI CCANNNNNTGG 1 cut(s) 1205
PleI GAGTC 2 cut(s) 768, 1945
PmaCI CACGTG 1 cut(s) 1489
PmlI CACGTG 1 cut(s) 1489
PpsI GAGTC 2 cut(s) 768, 1945
Ppu21I YACGTR 1 cut(s) 1489
Psp124BI GAGCTC 1 cut(s) 657
Psp6I CCWGG 1 cut(s) 1442
PspCI CACGTG 1 cut(s) 1489
PspFI CCCAGC 1 cut(s) 1608
PspGI CCWGG 1 cut(s) 1442
PspN4I GGNNCC 5 cut(s) 144, 254, 529, 1192, 1836
PspPI GGNCC 1 cut(s) 1046
PsrI GAACNNNNNNTAC 2 cut(s) 1350, 1382
PstI CTGCAG 1 cut(s) 1315
PstNI CAGNNNCTG 1 cut(s) 206
PsuI RGATCY 2 cut(s) 1771, 1834
PteI GCGCGC 1 cut(s) 309
PvuII CAGCTG 1 cut(s) 854
RsaI GTAC 5 cut(s) 677, 953, 965, 1226, 1368
RsaNI GTAC 5 cut(s) 676, 952, 964, 1225, 1367
RseI CAYNNNNRTG 3 cut(s) 542, 1277, 1410
Rsr2I CGGWCCG 1 cut(s) 1046
RsrII CGGWCCG 1 cut(s) 1046
SacI GAGCTC 1 cut(s) 657
SaqAI TTAA 5 cut(s) 287, 338, 437, 1704, 1715
Sau3AI GATC 6 cut(s) 183, 427, 955, 1069, 1771, 1834
Sau96I GGNCC 1 cut(s) 1046
SchI GAGTC 2 cut(s) 768, 1946
ScrFI CCNGG 3 cut(s) 1277, 1386, 1444
SduI GDGCHC 6 cut(s) 42, 145, 378, 657, 799, 1816
SfaNI GCATC 7 cut(s) 441, 1096, 1174, 1633, 1662, 1892, 1936
SfcI CTRYAG 3 cut(s) 354, 1054, 1311
SinI GGWCC 1 cut(s) 1046
SmiMI CAYNNNNRTG 3 cut(s) 542, 1277, 1410
SmlI CTYRAG 3 cut(s) 656, 1908, 1932
SmoI CTYRAG 3 cut(s) 656, 1908, 1932
SspMI CTAG 6 cut(s) 650, 938, 1067, 1400, 1730, 1847
SstI GAGCTC 1 cut(s) 657
StyD4I CCNGG 3 cut(s) 1275, 1384, 1442
StyI CCWWGG 3 cut(s) 423, 1114, 1286
TaaI ACNGT 7 cut(s) 130, 160, 735, 1046, 1253, 1373, 1740
TaiI ACGT 3 cut(s) 1434, 1491, 1569
TaqI TCGA 4 cut(s) 230, 458, 896, 1521
TatI WGTACW 3 cut(s) 675, 1224, 1366
TauI GCSGC 6 cut(s) 10, 486, 998, 1615, 1883, 1927
TfiI GAWTC 2 cut(s) 941, 1282
Tru1I TTAA 5 cut(s) 287, 338, 437, 1704, 1715
Tru9I TTAA 5 cut(s) 287, 338, 437, 1704, 1715
TscAI CASTG 3 cut(s) 133, 740, 1745
TseFI GTSAC 4 cut(s) 1373, 1427, 1474, 1489
TseI GCWGC 9 cut(s) 408, 788, 842, 851, 1109, 1155, 1291, 1310, 1726
Tsp45I GTSAC 4 cut(s) 1373, 1427, 1474, 1489
TspDTI ATGAA 4 cut(s) 526, 558, 917, 1331
TspGWI ACGGA 3 cut(s) 762, 820, 901
TspRI CASTG 3 cut(s) 133, 740, 1745
Van91I CCANNNNNTGG 1 cut(s) 1205
VneI GTGCAC 2 cut(s) 38, 795
VpaK11BI GGWCC 1 cut(s) 1046
XapI RAATTY 5 cut(s) 85, 101, 235, 1202, 1888
XceI RCATGY 1 cut(s) 795
XmiI GTMKAC 1 cut(s) 1053
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 6 cut(s) 650, 938, 1067, 1400, 1730, 1847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.