MD17G1215400.v1.1

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000353
Physical Location & Seq
Forward (+)
26229857 .. 26231805
1949 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1215400.v1.1.491

Sequence Viewer

Length: 1578 bp
ATGAACAAAACGTATGAGCTCCCACCAGGCAGTGATATATCATTTGTCCGCATTGGATTGCCAAGCATGGAACGCGTGTCTGCTAATTTATCCTATGATACCATGTCACCAGGAATGGTCTCTAGATTGTCAATGAACTCCGAATTTGACAGCAGAAGCTCTACTTCTACGGCGTCTTATTCTGGAACAAAATTTATTGACATGAGCTCTCCACAGCGCGATTTCTCATCATCCTCTTTCGAAAGTGGAAACTCATGGCCATCATCACAGCAGGATGATGTGGAAGCTGAAATGAGGCGGCTCATGCTGGAGCTCAAACAAACAAGGGAAATGTACGCCACAGCCTGCAAGGAGGCAGTCACAGCAAAACATAAGGCAACAGAAGTTAACCGATGGAAACGGGAAGAAGAAATGCGATTAGAAGAGGCACGACTAGCTGAGGAAGCTGCAAGGGAACTTGTAGAAAAGGAGAAAGCAAAATGTAGAGCTGCCATTGAGGCAGCAGAAGTGGCTCAACGGGTTGCTGAACTGGAATCGCGGAAAAGAAGGAATGCAGAATTGAAAGCCCTCAAAGAAGTTGAACAGAGGAAGAAGTCAATAGATCCAAGAGCATATGAGCTCAGGTACAGGAAATACACAATCGAGGAGATTGAAGCGGCAACATATGCTTTTTCGGAGGGTTTCAAGATTGGAGAAGGAGGCTATGGGCCGGTATATAGAGGTGAACTGGACCACACACCGGTGGCAATAAAAGTTTTACGTCCAGACGCAGCACAAGGACAGTCGCAGTTCAAGCAAGAGGTTGAAGTACTGAGCTGCATAAGGCATCCAAACATGGTTCTGCTTCTTGGAGCATGTCCAGAGTATGGCTGCCTGGTCTATGAGTACATGGCCAATGGGAGCTTAGAAGACCGTCTCTTCCGGCGAGGCAACACCCCAGTTATTCCTTGGCAGATAAGGTTCAGAATTGCTGCCGAAATTGGGACAGGGCTTTTGTTCCTTCATCAGACCAAGCCAGAGCCCATTGTTCACCGAGACCTAAAGCCGGACAACATTTTGCTAGACTATAACTTTGTGAGCAAGATTAGTGATGTAGGTTTAGCCAGGCTCGTCCCTCCATCAGTAGCCGACTCTGTCACTCAGTATCACATGACATCAACGGCCGGAACATTCTGTTATATCGACCCAGAGTACCAGCAAACGGGAATGCTTGGAGTAAAATCTGATGTCTACTCACTTGGGGTCATGCTTCTACAACTAATAACTGCCAGGCCACCAATGGGTTTGACTCGTCATGTTGAGCATGCTATTGAGAGTGGGACTTTCCTCGACGTTCTTGATCCTGCTGTTCCTGATTGGCCTGTTGAGGAAACAATGAAGTTTGCTAAGGTAGCTTTGCAGTGTGCTGAAATGAGGCGAAGAGACAGACCGGACCTCGGGAAGGTTGTTCTACCCGAGCTTAACAGATTGAGAGAACTTGCTCAAGATAGCTTGAACTGCGCCATGTTTGGTGGCGGTGAAGTATTAGCAGCAAAACAAGGCCTCAGTTCCACAAGACAAGTGAGTTTCATAACGTAG

Protein Analysis

526

Amino Acids

59.03

Weight (kDa)

5.94

Isoelectric Point (pI)

52.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 226 - 476 3.4e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 229 - 482 3.5e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 866
AccI GTMKAC 1 cut(s) 1230
AccII CGCG 3 cut(s) 75, 219, 538
AciI CCGC 5 cut(s) 49, 298, 538, 656, 1515
AclWI GGATC 2 cut(s) 596, 1334
AcoI YGGCCR 3 cut(s) 257, 891, 1161
AcsI RAATTY 2 cut(s) 143, 191
AcyI GRCGYC 1 cut(s) 173
AfaI GTAC 5 cut(s) 335, 626, 810, 887, 1193
AfiI CCNNNNNNNGG 8 cut(s) 739, 866, 981, 1045, 1201, 1280, 1436, 1441
AflIII ACRYGT 1 cut(s) 73
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 7 cut(s) 562, 581, 653, 685, 793, 806, 1495
AjnI CCWGG 5 cut(s) 25, 109, 873, 1103, 1268
AleI CACNNNNGTG 1 cut(s) 740
Alw21I GWGCWC 4 cut(s) 21, 209, 315, 621
Alw26I GTCTC 4 cut(s) 124, 920, 1029, 1416
AlwI GGATC 2 cut(s) 596, 1334
Ama87I CYCGRG 2 cut(s) 1436, 1454
AoxI GGCC 7 cut(s) 257, 707, 891, 1161, 1271, 1358, 1540
ApeKI GCWGC 8 cut(s) 446, 488, 500, 770, 816, 870, 971, 1529
ApoI RAATTY 2 cut(s) 143, 191
ArsI GACNNNNNNTTYG 4 cut(s) 976, 1008, 1055, 1087
AsiGI ACCGGT 1 cut(s) 739
AspLEI GCGC 2 cut(s) 219, 1502
AspS9I GGNCC 3 cut(s) 707, 730, 1432
AsuHPI GGTGA 4 cut(s) 99, 734, 1022, 1529
AsuII TTCGAA 1 cut(s) 240
AvaI CYCGRG 2 cut(s) 1436, 1454
AvaII GGWCC 2 cut(s) 730, 1432
BalI TGGCCA 2 cut(s) 259, 893
BanII GRGCYC 5 cut(s) 21, 209, 315, 621, 1023
BbsI GAAGAC 1 cut(s) 915
Bbv12I GWGCWC 4 cut(s) 21, 209, 315, 621
BbvCI CCTCAGC 1 cut(s) 438
BbvI GCAGC 8 cut(s) 433, 475, 512, 782, 803, 857, 958, 1541
BccI CCATC 3 cut(s) 268, 387, 1126
BceAI ACGGC 2 cut(s) 186, 1176
BciT130I CCWGG 5 cut(s) 27, 111, 875, 1105, 1270
BcoDI GTCTC 4 cut(s) 124, 920, 1029, 1416
BfaI CTAG 3 cut(s) 123, 434, 1061
BglI GCCNNNNNGGC 1 cut(s) 497
BmcAI AGTACT 1 cut(s) 810
Bme1390I CCNGG 5 cut(s) 27, 111, 875, 1105, 1270
Bme18I GGWCC 2 cut(s) 730, 1432
BmeT110I CYCGRG 2 cut(s) 1436, 1454
BmgT120I GGNCC 3 cut(s) 707, 730, 1432
BmrFI CCNGG 5 cut(s) 27, 111, 875, 1105, 1270
BmrI ACTGGG 1 cut(s) 932
BmsI GCATC 1 cut(s) 835
BmuI ACTGGG 1 cut(s) 932
BpiI GAAGAC 1 cut(s) 915
BpmI CTGGAG 1 cut(s) 329
Bpu10I CCTNAGC 3 cut(s) 438, 620, 1386
Bpu14I TTCGAA 1 cut(s) 240
BpuEI CTTGAG 1 cut(s) 1467
BsaHI GRCGYC 1 cut(s) 173
BsaI GGTCTC 2 cut(s) 124, 1029
BsaJI CCNNGG 2 cut(s) 947, 1435
BsaWI WCCGGW 2 cut(s) 739, 1429
Bsc4I CCNNNNNNNGG 8 cut(s) 739, 866, 981, 1045, 1201, 1280, 1436, 1441
Bse118I RCCGGY 2 cut(s) 709, 739
Bse1I ACTGG 3 cut(s) 534, 732, 938
BseBI CCWGG 5 cut(s) 27, 111, 875, 1105, 1270
BseDI CCNNGG 2 cut(s) 947, 1435
BseGI GGATG 3 cut(s) 230, 280, 826
BseLI CCNNNNNNNGG 8 cut(s) 739, 866, 981, 1045, 1201, 1280, 1436, 1441
BseMII CTCAG 5 cut(s) 429, 634, 803, 1154, 1558
BseNI ACTGG 3 cut(s) 534, 732, 938
BseRI GAGGAG 1 cut(s) 659
BseX3I CGGCCG 1 cut(s) 1161
BseXI GCAGC 8 cut(s) 433, 475, 512, 782, 803, 857, 958, 1541
Bsh1236I CGCG 3 cut(s) 75, 219, 538
Bsh1285I CGRYCG 1 cut(s) 1164
BshFI GGCC 7 cut(s) 259, 709, 893, 1163, 1273, 1360, 1542
BshTI ACCGGT 1 cut(s) 739
BsiEI CGRYCG 1 cut(s) 1164
BsiHKAI GWGCWC 4 cut(s) 21, 209, 315, 621
BsiHKCI CYCGRG 2 cut(s) 1436, 1454
BsiSI CCGG 6 cut(s) 710, 740, 922, 1046, 1164, 1430
BslFI GGGAC 3 cut(s) 997, 1097, 1333
BslI CCNNNNNNNGG 8 cut(s) 739, 866, 981, 1045, 1201, 1280, 1436, 1441
BsmAI GTCTC 4 cut(s) 124, 920, 1029, 1416
BsmBI CGTCTC 1 cut(s) 920
BsmFI GGGAC 3 cut(s) 997, 1097, 1333
BsmI GAATGC 2 cut(s) 556, 1212
BsnI GGCC 7 cut(s) 259, 709, 893, 1163, 1273, 1360, 1542
Bso31I GGTCTC 2 cut(s) 124, 1029
BsoBI CYCGRG 2 cut(s) 1436, 1454
Bsp119I TTCGAA 1 cut(s) 240
Bsp1286I GDGCHC 5 cut(s) 21, 209, 315, 621, 1023
Bsp143I GATC 2 cut(s) 601, 1339
BspACI CCGC 5 cut(s) 49, 298, 538, 656, 1515
BspANI GGCC 7 cut(s) 259, 709, 893, 1163, 1273, 1360, 1542
BspCNI CTCAG 5 cut(s) 430, 633, 804, 1153, 1557
BspFNI CGCG 3 cut(s) 75, 219, 538
BspPI GGATC 2 cut(s) 596, 1334
BspT104I TTCGAA 1 cut(s) 240
BspTNI GGTCTC 2 cut(s) 124, 1029
BsrFI RCCGGY 2 cut(s) 709, 739
BsrI ACTGG 3 cut(s) 534, 732, 938
BssAI RCCGGY 2 cut(s) 709, 739
BssECI CCNNGG 2 cut(s) 947, 1435
BssMI GATC 2 cut(s) 601, 1339
BssNI GRCGYC 1 cut(s) 173
BssT1I CCWWGG 1 cut(s) 947
Bst2UI CCWGG 5 cut(s) 27, 111, 875, 1105, 1270
Bst4CI ACNGT 2 cut(s) 783, 914
Bst6I CTCTTC 3 cut(s) 417, 923, 1414
BstACI GRCGYC 1 cut(s) 173
BstAPI GCANNNNNTGC 1 cut(s) 665
BstBI TTCGAA 1 cut(s) 240
BstC8I GCNNGC 2 cut(s) 346, 1305
BstDEI CTNAG 7 cut(s) 438, 620, 812, 904, 1140, 1386, 1544
BstENI CCTNNNNNAGG 1 cut(s) 1439
BstF5I GGATG 3 cut(s) 230, 280, 826
BstFNI CGCG 3 cut(s) 75, 219, 538
BstHHI GCGC 2 cut(s) 219, 1502
BstKTI GATC 2 cut(s) 604, 1342
BstMAI GTCTC 4 cut(s) 124, 920, 1029, 1416
BstMBI GATC 2 cut(s) 601, 1339
BstMCI CGRYCG 1 cut(s) 1164
BstNI CCWGG 5 cut(s) 27, 111, 875, 1105, 1270
BstNSI RCATGY 2 cut(s) 858, 1307
BstSCI CCNGG 5 cut(s) 25, 109, 873, 1103, 1268
BstUI CGCG 3 cut(s) 75, 219, 538
BstV1I GCAGC 8 cut(s) 433, 475, 512, 782, 803, 857, 958, 1541
BstV2I GAAGAC 1 cut(s) 915
BstX2I RGATCY 1 cut(s) 601
BstYI RGATCY 1 cut(s) 601
BstZI CGGCCG 1 cut(s) 1161
BsuRI GGCC 7 cut(s) 259, 709, 893, 1163, 1273, 1360, 1542
BtsCI GGATG 3 cut(s) 230, 280, 826
BtsI GCAGTG 2 cut(s) 37, 1406
BtsIMutI CAGTG 2 cut(s) 37, 1406
Cac8I GCNNGC 2 cut(s) 346, 1305
CfoI GCGC 2 cut(s) 219, 1502
Cfr10I RCCGGY 2 cut(s) 709, 739
Cfr13I GGNCC 3 cut(s) 707, 730, 1432
CseI GACGC 2 cut(s) 162, 776
Csp6I GTAC 5 cut(s) 334, 625, 809, 886, 1192
CspAI ACCGGT 1 cut(s) 739
CviQI GTAC 5 cut(s) 334, 625, 809, 886, 1192
DdeI CTNAG 7 cut(s) 438, 620, 812, 904, 1140, 1386, 1544
DpnI GATC 2 cut(s) 603, 1341
DpnII GATC 2 cut(s) 601, 1339
EaeI YGGCCR 3 cut(s) 257, 891, 1161
EagI CGGCCG 1 cut(s) 1161
Eam1104I CTCTTC 3 cut(s) 417, 923, 1414
EarI CTCTTC 3 cut(s) 417, 923, 1414
Ecl136II GAGCTC 4 cut(s) 19, 207, 313, 619
EclXI CGGCCG 1 cut(s) 1161
Eco130I CCWWGG 1 cut(s) 947
Eco147I AGGCCT 1 cut(s) 1542
Eco24I GRGCYC 5 cut(s) 21, 209, 315, 621, 1023
Eco31I GGTCTC 2 cut(s) 124, 1029
Eco47I GGWCC 2 cut(s) 730, 1432
Eco52I CGGCCG 1 cut(s) 1161
Eco53kI GAGCTC 4 cut(s) 19, 207, 313, 619
Eco88I CYCGRG 2 cut(s) 1436, 1454
EcoICRI GAGCTC 4 cut(s) 19, 207, 313, 619
EcoNI CCTNNNNNAGG 1 cut(s) 1439
EcoRII CCWGG 5 cut(s) 25, 109, 873, 1103, 1268
EcoT14I CCWWGG 1 cut(s) 947
EcoT38I GRGCYC 5 cut(s) 21, 209, 315, 621, 1023
ErhI CCWWGG 1 cut(s) 947
Esp3I CGTCTC 1 cut(s) 920
FalI AAGNNNNNCTT 2 cut(s) 148, 180
FaqI GGGAC 3 cut(s) 997, 1097, 1333
FauNDI CATATG 2 cut(s) 613, 664
FblI GTMKAC 1 cut(s) 1230
FokI GGATG 3 cut(s) 217, 287, 813
FriOI GRGCYC 5 cut(s) 21, 209, 315, 621, 1023
FspBI CTAG 3 cut(s) 123, 434, 1061
GlaI GCGC 2 cut(s) 218, 1501
GsuI CTGGAG 1 cut(s) 329
HaeIII GGCC 7 cut(s) 259, 709, 893, 1163, 1273, 1360, 1542
HapII CCGG 6 cut(s) 710, 740, 922, 1046, 1164, 1430
HgaI GACGC 2 cut(s) 162, 776
HhaI GCGC 2 cut(s) 219, 1502
Hin1I GRCGYC 1 cut(s) 173
Hin6I GCGC 2 cut(s) 217, 1500
HinP1I GCGC 2 cut(s) 217, 1500
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 3 cut(s) 533, 1130, 1288
HpaI GTTAAC 1 cut(s) 388
HpaII CCGG 6 cut(s) 710, 740, 922, 1046, 1164, 1430
HphI GGTGA 4 cut(s) 99, 734, 1022, 1529
Hpy166II GTNNAC 4 cut(s) 388, 725, 1030, 1231
Hpy188I TCNGA 5 cut(s) 142, 676, 965, 1008, 1225
Hpy188III TCNNGA 9 cut(s) 123, 183, 685, 764, 860, 1337, 1352, 1438, 1484
Hpy8I GTNNAC 4 cut(s) 388, 725, 1030, 1231
Hpy99I CGWCG 1 cut(s) 1334
HpyAV CCTTC 4 cut(s) 540, 689, 1010, 1435
HpyCH4III ACNGT 2 cut(s) 783, 914
HpyCH4IV ACGT 4 cut(s) 11, 760, 1332, 1574
HpyCH4V TGCA 5 cut(s) 348, 449, 554, 819, 1399
HpyF3I CTNAG 7 cut(s) 438, 620, 812, 904, 1140, 1386, 1544
HpySE526I ACGT 4 cut(s) 11, 760, 1332, 1574
Hsp92I GRCGYC 1 cut(s) 173
HspAI GCGC 2 cut(s) 217, 1500
KspAI GTTAAC 1 cut(s) 388
Kzo9I GATC 2 cut(s) 601, 1339
LmnI GCTCC 4 cut(s) 24, 310, 851, 900
Lsp1109I GCAGC 8 cut(s) 433, 475, 512, 782, 803, 857, 958, 1541
LweI GCATC 1 cut(s) 835
MaeI CTAG 3 cut(s) 123, 434, 1061
MaeII ACGT 4 cut(s) 11, 760, 1332, 1574
MaeIII GTNAC 3 cut(s) 105, 358, 1135
MalI GATC 2 cut(s) 603, 1341
MboI GATC 2 cut(s) 601, 1339
MboII GAAGA 7 cut(s) 416, 419, 434, 601, 910, 920, 1431
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 5 cut(s) 21, 209, 315, 621, 1023
MlsI TGGCCA 2 cut(s) 259, 893
MluCI AATT 6 cut(s) 85, 143, 191, 557, 966, 978
MluI ACGCGT 1 cut(s) 73
MluNI TGGCCA 2 cut(s) 259, 893
MlyI GAGTC 2 cut(s) 1124, 1282
Mox20I TGGCCA 2 cut(s) 259, 893
MscI TGGCCA 2 cut(s) 259, 893
MseI TTAA 2 cut(s) 387, 1461
MslI CAYNNNNRTG 1 cut(s) 740
Msp20I TGGCCA 2 cut(s) 259, 893
MspI CCGG 6 cut(s) 710, 740, 922, 1046, 1164, 1430
MspR9I CCNGG 5 cut(s) 27, 111, 875, 1105, 1270
Mva1269I GAATGC 2 cut(s) 556, 1212
MvaI CCWGG 5 cut(s) 27, 111, 875, 1105, 1270
MvnI CGCG 3 cut(s) 75, 219, 538
NdeI CATATG 2 cut(s) 613, 664
NdeII GATC 2 cut(s) 601, 1339
NmuCI GTSAC 3 cut(s) 105, 358, 1135
NspI RCATGY 2 cut(s) 858, 1307
NspV TTCGAA 1 cut(s) 240
OliI CACNNNNGTG 1 cut(s) 740
PaeI GCATGC 1 cut(s) 1307
PceI AGGCCT 1 cut(s) 1542
PctI GAATGC 2 cut(s) 556, 1212
PfeI GAWTC 1 cut(s) 533
PflFI GACNNNGTC 1 cut(s) 1133
PflMI CCANNNNNTGG 1 cut(s) 866
PinAI ACCGGT 1 cut(s) 739
PleI GAGTC 2 cut(s) 1124, 1282
PpsI GAGTC 2 cut(s) 1124, 1282
Psp124BI GAGCTC 4 cut(s) 21, 209, 315, 621
Psp6I CCWGG 5 cut(s) 25, 109, 873, 1103, 1268
PspGI CCWGG 5 cut(s) 25, 109, 873, 1103, 1268
PspPI GGNCC 3 cut(s) 707, 730, 1432
PsuI RGATCY 1 cut(s) 601
PsyI GACNNNGTC 1 cut(s) 1133
RsaI GTAC 5 cut(s) 335, 626, 810, 887, 1193
RsaNI GTAC 5 cut(s) 334, 625, 809, 886, 1192
RseI CAYNNNNRTG 1 cut(s) 740
SacI GAGCTC 4 cut(s) 21, 209, 315, 621
SaqAI TTAA 2 cut(s) 387, 1461
Sau3AI GATC 2 cut(s) 601, 1339
Sau96I GGNCC 3 cut(s) 707, 730, 1432
ScaI AGTACT 1 cut(s) 810
SchI GAGTC 2 cut(s) 1124, 1282
ScrFI CCNGG 5 cut(s) 27, 111, 875, 1105, 1270
SduI GDGCHC 5 cut(s) 21, 209, 315, 621, 1023
SfaNI GCATC 1 cut(s) 835
SfuI TTCGAA 1 cut(s) 240
SgrAI CRCCGGYG 1 cut(s) 739
SinI GGWCC 2 cut(s) 730, 1432
SmiMI CAYNNNNRTG 1 cut(s) 740
SmlI CTYRAG 1 cut(s) 1482
SmoI CTYRAG 1 cut(s) 1482
SphI GCATGC 1 cut(s) 1307
Sse9I AATT 6 cut(s) 85, 143, 191, 557, 966, 978
SseBI AGGCCT 1 cut(s) 1542
SsiI CCGC 5 cut(s) 49, 298, 538, 656, 1515
SspMI CTAG 3 cut(s) 123, 434, 1061
SstI GAGCTC 4 cut(s) 21, 209, 315, 621
StuI AGGCCT 1 cut(s) 1542
StyD4I CCNGG 5 cut(s) 25, 109, 873, 1103, 1268
StyI CCWWGG 1 cut(s) 947
TaaI ACNGT 2 cut(s) 783, 914
TaiI ACGT 4 cut(s) 14, 763, 1335, 1577
TaqI TCGA 4 cut(s) 240, 642, 1182, 1329
TasI AATT 6 cut(s) 85, 143, 191, 557, 966, 978
TatI WGTACW 2 cut(s) 808, 885
TauI GCSGC 2 cut(s) 301, 659
TfiI GAWTC 1 cut(s) 533
Tru1I TTAA 2 cut(s) 387, 1461
Tru9I TTAA 2 cut(s) 387, 1461
TscAI CASTG 2 cut(s) 37, 1406
TseFI GTSAC 3 cut(s) 105, 358, 1135
TseI GCWGC 8 cut(s) 446, 488, 500, 770, 816, 870, 971, 1529
Tsp45I GTSAC 3 cut(s) 105, 358, 1135
TspDTI ATGAA 5 cut(s) 17, 149, 992, 1391, 1558
TspRI CASTG 2 cut(s) 37, 1406
Tth111I GACNNNGTC 1 cut(s) 1133
Van91I CCANNNNNTGG 1 cut(s) 866
VpaK11BI GGWCC 2 cut(s) 730, 1432
XagI CCTNNNNNAGG 1 cut(s) 1439
XapI RAATTY 2 cut(s) 143, 191
XbaI TCTAGA 1 cut(s) 122
XceI RCATGY 2 cut(s) 858, 1307
XcmI CCANNNNNNNNNTGG 2 cut(s) 945, 1276
XmiI GTMKAC 1 cut(s) 1230
XspI CTAG 3 cut(s) 123, 434, 1061
ZrmI AGTACT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.